Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'OtherEntity'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
cellType + INSTANCE CellType PhysicalEntity ALL INTEGER(10) UNSIGNED
compartment + INSTANCE Compartment OtherEntity ALL INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
disease + INSTANCE Disease PhysicalEntity   INTEGER(10) UNSIGNED
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
literatureReference + INSTANCE Publication PhysicalEntity   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity ANY TEXT
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED
systematicName 1 TEXT N/A PhysicalEntity   TEXT

Referers of class 'OtherEntity' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
PhysicalEntity inferredFrom +
GenomeEncodedEntity inferredFrom +
CandidateSet inferredFrom +
Polymer inferredFrom +
Drug inferredFrom +
RNADrug inferredFrom +
ChemicalDrug inferredFrom +
DefinedSet inferredFrom +
EntitySet inferredFrom +
Complex inferredFrom +
EntityWithAccessionedSequence inferredFrom +
Cell inferredFrom +
ProteinDrug inferredFrom +
SimpleEntity inferredFrom +
OtherEntity inferredFrom +
BlackBoxEvent entityOnOtherCell +
ReactionlikeEvent entityOnOtherCell +
CellDevelopmentStep entityOnOtherCell +
Reaction entityOnOtherCell +
Polymerisation entityOnOtherCell +
Depolymerisation entityOnOtherCell +
FailedReaction entityOnOtherCell +
Complex entityOnOtherCell +
Polymer repeatedUnit +
EntityFunctionalStatus diseaseEntity 1
EntitySet hasMember +
CandidateSet hasMember +
DefinedSet hasMember +
BlackBoxEvent input +
ReactionlikeEvent input +
Reaction input +
Depolymerisation input +
FailedReaction input +
Polymerisation input +
Cell inferredTo +
EntityWithAccessionedSequence inferredTo +
ProteinDrug inferredTo +
SimpleEntity inferredTo +
OtherEntity inferredTo +
ChemicalDrug inferredTo +
DefinedSet inferredTo +
EntitySet inferredTo +
Complex inferredTo +
Polymer inferredTo +
Drug inferredTo +
RNADrug inferredTo +
PhysicalEntity inferredTo +
GenomeEncodedEntity inferredTo +
CandidateSet inferredTo +
CandidateSet hasCandidate +
CatalystActivity physicalEntity 1
PhysicalEntityCellType physicalEntity 1
InteractionEvent partners +
_UpdateTracker updatedInstance 1
EntityFunctionalStatus normalEntity 1
CellDevelopmentStep requiredInputComponent +
BlackBoxEvent requiredInputComponent +
ReactionlikeEvent requiredInputComponent +
Polymerisation requiredInputComponent +
Reaction requiredInputComponent +
Depolymerisation requiredInputComponent +
FailedReaction requiredInputComponent +
NegativeRegulation activeUnit +
PositiveGeneExpressionRegulation activeUnit +
PositiveRegulation activeUnit +
Requirement activeUnit +
NegativeGeneExpressionRegulation activeUnit +
Regulation activeUnit +
CatalystActivity activeUnit +
Complex hasComponent +
BlackBoxEvent output +
ReactionlikeEvent output +
FailedReaction output +
Depolymerisation output +
Reaction output +
Polymerisation output +
PositiveRegulation regulator 1
Regulation regulator 1
NegativeGeneExpressionRegulation regulator 1
Requirement regulator 1
NegativeRegulation regulator 1
PositiveGeneExpressionRegulation regulator 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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