Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReferenceGeneProduct modified +
StableIdentifierHistory modified +
ReferenceGroup modified +
GO_MolecularFunction modified +
Affiliation modified +
CrosslinkedResidue modified +
EntitySet modified +
Polymerisation modified +
Regulation modified +
Cell modified +
DeletedControlledVocabulary modified +
PathwayDiagram modified +
Disease modified +
NegativePrecedingEvent modified +
Publication modified +
InstanceEdit modified +
StableIdentifierReleaseStatus modified +
PhysicalEntity modified +
DatabaseObject modified +
CellType modified +
_DeletedInstance modified +
ReferenceEntity modified +
GeneticallyModifiedResidue modified +
PositiveRegulation modified +
GO_CellularComponent modified +
ControlReference modified +
FailedReaction modified +
ReplacedResidue modified +
OtherEntity modified +
InterChainCrosslinkedResidue modified +
EntityWithAccessionedSequence modified +
Anatomy modified +
DrugActionType modified +
NegativeRegulation modified +
Depolymerisation modified +
ControlledVocabulary modified +
_Deleted modified +
CandidateSet modified +
StableIdentifier modified +
ReferenceRNASequence modified +
NonsenseMutation modified +
TranscriptionalModification modified +
FragmentDeletionModification modified +
URL modified +
ExternalOntology modified +
SimpleEntity modified +
Event modified +
Polymer modified +
ProteinDrug modified +
FragmentReplacedModification modified +
AbstractModifiedResidue modified +
NegativePrecedingEventReason modified +
_Release modified +
ModifiedNucleotide modified +
Summation modified +
BlackBoxEvent modified +
PositiveGeneExpressionRegulation modified +
NegativeGeneExpressionRegulation modified +
EvidenceType modified +
Pathway modified +
SequenceOntology modified +
MarkerReference modified +
FragmentInsertionModification modified +
FragmentModification modified +
Drug modified +
Complex modified +
PsiMod modified +
ReactionlikeEvent modified +
DatabaseIdentifier modified +
DefinedSet modified +
FunctionalStatus modified +
ReferenceSequence modified +
InteractionEvent modified +
RegulationReference modified +
FunctionalStatusType modified +
ReferenceTherapeutic modified +
Species modified +
_UpdateTracker modified +
Compartment modified +
Reaction modified +
IntraChainCrosslinkedResidue modified +
TranslationalModification modified +
ModifiedResidue modified +
RNADrug modified +
CatalystActivityReference modified +
GenomeEncodedEntity modified +
CatalystActivity modified +
ReactionType modified +
CellDevelopmentStep modified +
Figure modified +
GroupModifiedResidue modified +
EntityFunctionalStatus modified +
FrontPage modified +
ChemicalDrug modified +
Book modified +
ReferenceDNASequence modified +
Person modified +
ReferenceIsoform modified +
LiteratureReference modified +
ReferenceDatabase modified +
CellLineagePath modified +
ReferenceMolecule modified +
Requirement modified +
Taxon modified +
GO_BiologicalProcess modified +
GenomeEncodedEntity revised +
Depolymerisation revised +
BlackBoxEvent revised +
CellDevelopmentStep revised +
CandidateSet revised +
Pathway revised +
ChemicalDrug revised +
Drug revised +
Complex revised +
PhysicalEntity revised +
CellLineagePath revised +
ReactionlikeEvent revised +
DefinedSet revised +
InteractionEvent revised +
SimpleEntity revised +
Event revised +
Polymer revised +
FailedReaction revised +
ProteinDrug revised +
OtherEntity revised +
Reaction revised +
RNADrug revised +
EntitySet revised +
Polymerisation revised +
EntityWithAccessionedSequence revised +
Cell revised +
CellDevelopmentStep authored +
BlackBoxEvent authored +
Pathway authored +
CandidateSet authored 1
GenomeEncodedEntity authored 1
Depolymerisation authored +
CellLineagePath authored +
ReactionlikeEvent authored +
ChemicalDrug authored 1
Drug authored 1
PhysicalEntity authored 1
Complex authored 1
SimpleEntity authored 1
Event authored +
InteractionEvent authored +
DefinedSet authored 1
Reaction authored +
EntityWithAccessionedSequence authored 1
Cell authored 1
Polymerisation authored +
EntitySet authored 1
RNADrug authored 1
FailedReaction authored +
Polymer authored 1
ProteinDrug authored 1
OtherEntity authored 1
ReactionlikeEvent edited +
CellLineagePath edited +
Drug edited +
Complex edited +
PhysicalEntity edited +
ChemicalDrug edited +
Pathway edited +
CandidateSet edited +
BlackBoxEvent edited +
CellDevelopmentStep edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
EntityWithAccessionedSequence edited +
Cell edited +
Polymerisation edited +
EntitySet edited +
RNADrug edited +
Reaction edited +
OtherEntity edited +
ProteinDrug edited +
FailedReaction edited +
Polymer edited +
Event edited +
SimpleEntity edited +
InteractionEvent edited +
DefinedSet edited +
Polymer reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
Reaction reviewed +
EntitySet reviewed +
Polymerisation reviewed +
RNADrug reviewed +
EntityWithAccessionedSequence reviewed +
Cell reviewed +
DefinedSet reviewed +
InteractionEvent reviewed +
SimpleEntity reviewed +
Event reviewed +
ChemicalDrug reviewed +
Complex reviewed +
Drug reviewed +
PhysicalEntity reviewed +
CellLineagePath reviewed +
ReactionlikeEvent reviewed +
GenomeEncodedEntity reviewed +
Depolymerisation reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
CandidateSet reviewed +
Pathway reviewed +
FunctionalStatus created 1
ReferenceSequence created 1
InteractionEvent created 1
DefinedSet created 1
DatabaseIdentifier created 1
RegulationReference created 1
FunctionalStatusType created 1
ReferenceTherapeutic created 1
Species created 1
_UpdateTracker created 1
Compartment created 1
TranslationalModification created 1
IntraChainCrosslinkedResidue created 1
Reaction created 1
ModifiedResidue created 1
RNADrug created 1
GenomeEncodedEntity created 1
CatalystActivityReference created 1
EntityFunctionalStatus created 1
GroupModifiedResidue created 1
ReactionType created 1
CatalystActivity created 1
CellDevelopmentStep created 1
Figure created 1
FrontPage created 1
Book created 1
ChemicalDrug created 1
ReferenceIsoform created 1
Person created 1
ReferenceDNASequence created 1
ReferenceMolecule created 1
LiteratureReference created 1
ReferenceDatabase created 1
CellLineagePath created 1
GO_BiologicalProcess created 1
Taxon created 1
Requirement created 1
URL created 1
SimpleEntity created 1
ExternalOntology created 1
Event created 1
Polymer created 1
ProteinDrug created 1
NegativePrecedingEventReason created 1
AbstractModifiedResidue created 1
FragmentReplacedModification created 1
ModifiedNucleotide created 1
_Release created 1
Summation created 1
EvidenceType created 1
NegativeGeneExpressionRegulation created 1
PositiveGeneExpressionRegulation created 1
BlackBoxEvent created 1
SequenceOntology created 1
Pathway created 1
FragmentInsertionModification created 1
MarkerReference created 1
Drug created 1
Complex created 1
FragmentModification created 1
PsiMod created 1
ReactionlikeEvent created 1
DatabaseObject created 1
CellType created 1
_DeletedInstance created 1
ReferenceEntity created 1
PositiveRegulation created 1
GeneticallyModifiedResidue created 1
FailedReaction created 1
GO_CellularComponent created 1
ControlReference created 1
OtherEntity created 1
ReplacedResidue created 1
InterChainCrosslinkedResidue created 1
Anatomy created 1
EntityWithAccessionedSequence created 1
NegativeRegulation created 1
DrugActionType created 1
Depolymerisation created 1
_Deleted created 1
ControlledVocabulary created 1
CandidateSet created 1
StableIdentifier created 1
NonsenseMutation created 1
ReferenceRNASequence created 1
TranscriptionalModification created 1
FragmentDeletionModification created 1
ReferenceGeneProduct created 1
StableIdentifierHistory created 1
ReferenceGroup created 1
GO_MolecularFunction created 1
Affiliation created 1
CrosslinkedResidue created 1
Regulation created 1
Cell created 1
EntitySet created 1
Polymerisation created 1
DeletedControlledVocabulary created 1
PathwayDiagram created 1
NegativePrecedingEvent created 1
Disease created 1
Publication created 1
PhysicalEntity created 1
StableIdentifierReleaseStatus created 1
InstanceEdit created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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