Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances

Class name Attribute name Cardinality
FailedReaction modified +
DeletedControlledVocabulary modified +
ReactionlikeEvent modified +
RNADrug modified +
NegativePrecedingEventReason modified +
Reaction modified +
ReferenceTherapeutic modified +
CatalystActivity modified +
CatalystActivityReference modified +
EntitySet modified +
_DeletedInstance modified +
Figure modified +
Affiliation modified +
StableIdentifierHistory modified +
FrontPage modified +
NonsenseMutation modified +
_Release modified +
CrosslinkedResidue modified +
StableIdentifierReleaseStatus modified +
Book modified +
FragmentInsertionModification modified +
ControlledVocabulary modified +
StableIdentifier modified +
Depolymerisation modified +
Event modified +
NegativeRegulation modified +
ReferenceSequence modified +
InterChainCrosslinkedResidue modified +
Polymerisation modified +
ReferenceMolecule modified +
InteractionEvent modified +
CellLineagePath modified +
GO_MolecularFunction modified +
Anatomy modified +
PhysicalEntity modified +
PositiveGeneExpressionRegulation modified +
GroupModifiedResidue modified +
EntityFunctionalStatus modified +
URL modified +
Regulation modified +
ReferenceDatabase modified +
Summation modified +
Pathway modified +
NegativePrecedingEvent modified +
DatabaseIdentifier modified +
InstanceEdit modified +
FragmentModification modified +
MarkerReference modified +
ReferenceGeneProduct modified +
TranscriptionalModification modified +
ModifiedNucleotide modified +
_UpdateTracker modified +
ControlReference modified +
DefinedSet modified +
BlackBoxEvent modified +
TranslationalModification modified +
ReferenceEntity modified +
PathwayDiagram modified +
Publication modified +
IntraChainCrosslinkedResidue modified +
CellType modified +
NegativeGeneExpressionRegulation modified +
Requirement modified +
Disease modified +
AbstractModifiedResidue modified +
PsiMod modified +
_Deleted modified +
PositiveRegulation modified +
Cell modified +
SequenceOntology modified +
ProteinDrug modified +
ExternalOntology modified +
OtherEntity modified +
ReactionType modified +
FragmentReplacedModification modified +
SimpleEntity modified +
Person modified +
ModifiedResidue modified +
ChemicalDrug modified +
ReplacedResidue modified +
CandidateSet modified +
ReferenceIsoform modified +
DatabaseObject modified +
Drug modified +
GenomeEncodedEntity modified +
ReferenceDNASequence modified +
Taxon modified +
Species modified +
FunctionalStatus modified +
EvidenceType modified +
DrugActionType modified +
EntityWithAccessionedSequence modified +
Compartment modified +
CellDevelopmentStep modified +
ReferenceRNASequence modified +
GO_BiologicalProcess modified +
GeneticallyModifiedResidue modified +
Complex modified +
FunctionalStatusType modified +
ReferenceGroup modified +
LiteratureReference modified +
Polymer modified +
FragmentDeletionModification modified +
GO_CellularComponent modified +
RegulationReference modified +
ReactionlikeEvent created 1
DeletedControlledVocabulary created 1
FailedReaction created 1
Reaction created 1
ReferenceTherapeutic created 1
NegativePrecedingEventReason created 1
RNADrug created 1
_DeletedInstance created 1
EntitySet created 1
CatalystActivity created 1
CatalystActivityReference created 1
StableIdentifierHistory created 1
Figure created 1
Affiliation created 1
_Release created 1
NonsenseMutation created 1
FrontPage created 1
CrosslinkedResidue created 1
Depolymerisation created 1
StableIdentifier created 1
ControlledVocabulary created 1
Book created 1
StableIdentifierReleaseStatus created 1
FragmentInsertionModification created 1
ReferenceSequence created 1
NegativeRegulation created 1
Event created 1
InteractionEvent created 1
ReferenceMolecule created 1
InterChainCrosslinkedResidue created 1
Polymerisation created 1
Anatomy created 1
GO_MolecularFunction created 1
CellLineagePath created 1
GroupModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
PhysicalEntity created 1
Regulation created 1
EntityFunctionalStatus created 1
URL created 1
NegativePrecedingEvent created 1
Pathway created 1
ReferenceDatabase created 1
Summation created 1
InstanceEdit created 1
DatabaseIdentifier created 1
ModifiedNucleotide created 1
TranscriptionalModification created 1
MarkerReference created 1
ReferenceGeneProduct created 1
FragmentModification created 1
TranslationalModification created 1
ReferenceEntity created 1
BlackBoxEvent created 1
DefinedSet created 1
ControlReference created 1
_UpdateTracker created 1
Publication created 1
IntraChainCrosslinkedResidue created 1
PathwayDiagram created 1
AbstractModifiedResidue created 1
Disease created 1
NegativeGeneExpressionRegulation created 1
Requirement created 1
CellType created 1
PsiMod created 1
PositiveRegulation created 1
_Deleted created 1
ProteinDrug created 1
SequenceOntology created 1
Cell created 1
ChemicalDrug created 1
Person created 1
ModifiedResidue created 1
SimpleEntity created 1
FragmentReplacedModification created 1
OtherEntity created 1
ReactionType created 1
ExternalOntology created 1
Drug created 1
DatabaseObject created 1
ReferenceIsoform created 1
CandidateSet created 1
ReplacedResidue created 1
Taxon created 1
ReferenceDNASequence created 1
GenomeEncodedEntity created 1
EvidenceType created 1
FunctionalStatus created 1
Species created 1
EntityWithAccessionedSequence created 1
DrugActionType created 1
GO_BiologicalProcess created 1
ReferenceRNASequence created 1
CellDevelopmentStep created 1
Compartment created 1
Complex created 1
GeneticallyModifiedResidue created 1
ReferenceGroup created 1
FunctionalStatusType created 1
FragmentDeletionModification created 1
GO_CellularComponent created 1
LiteratureReference created 1
Polymer created 1
RegulationReference created 1
ProteinDrug authored 1
Cell authored 1
Complex authored 1
Pathway authored +
Drug authored 1
CandidateSet authored 1
Event authored +
BlackBoxEvent authored +
DefinedSet authored 1
SimpleEntity authored 1
ChemicalDrug authored 1
Depolymerisation authored +
Polymer authored 1
OtherEntity authored 1
Reaction authored +
RNADrug authored 1
CellLineagePath authored +
ReactionlikeEvent authored +
InteractionEvent authored +
GenomeEncodedEntity authored 1
Polymerisation authored +
FailedReaction authored +
CellDevelopmentStep authored +
EntityWithAccessionedSequence authored 1
EntitySet authored 1
PhysicalEntity authored 1
CandidateSet reviewed +
Event reviewed +
BlackBoxEvent reviewed +
DefinedSet reviewed +
Drug reviewed +
OtherEntity reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
Cell reviewed +
ProteinDrug reviewed +
Pathway reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
EntitySet reviewed +
PhysicalEntity reviewed +
EntityWithAccessionedSequence reviewed +
RNADrug reviewed +
CellLineagePath reviewed +
Reaction reviewed +
GenomeEncodedEntity reviewed +
FailedReaction reviewed +
Polymerisation reviewed +
InteractionEvent reviewed +
ReactionlikeEvent reviewed +
CandidateSet revised +
BlackBoxEvent revised +
Event revised +
DefinedSet revised +
Drug revised +
Polymer revised +
OtherEntity revised +
SimpleEntity revised +
Depolymerisation revised +
ChemicalDrug revised +
Cell revised +
ProteinDrug revised +
Complex revised +
Pathway revised +
CellDevelopmentStep revised +
PhysicalEntity revised +
EntitySet revised +
EntityWithAccessionedSequence revised +
CellLineagePath revised +
RNADrug revised +
Reaction revised +
FailedReaction revised +
GenomeEncodedEntity revised +
Polymerisation revised +
ReactionlikeEvent revised +
InteractionEvent revised +
_Deleted replacementInstances +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
EntitySet edited +
PhysicalEntity edited +
Reaction edited +
RNADrug edited +
CellLineagePath edited +
InteractionEvent edited +
ReactionlikeEvent edited +
FailedReaction edited +
Polymerisation edited +
GenomeEncodedEntity edited +
Drug edited +
Event edited +
CandidateSet edited +
DefinedSet edited +
BlackBoxEvent edited +
ChemicalDrug edited +
Depolymerisation edited +
SimpleEntity edited +
OtherEntity edited +
Polymer edited +
ProteinDrug edited +
Cell edited +
Pathway edited +
Complex edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.