Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Depolymerisation edited +
RNADrug edited +
CellDevelopmentStep edited +
ChemicalDrug edited +
Complex edited +
CandidateSet edited +
GenomeEncodedEntity edited +
DefinedSet edited +
Event edited +
EntitySet edited +
ReactionlikeEvent edited +
ProteinDrug edited +
Polymerisation edited +
InteractionEvent edited +
Pathway edited +
Reaction edited +
FailedReaction edited +
SimpleEntity edited +
Cell edited +
PhysicalEntity edited +
Polymer edited +
CellLineagePath edited +
Drug edited +
OtherEntity edited +
EntityWithAccessionedSequence edited +
BlackBoxEvent edited +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
Reaction structureModified +
Pathway structureModified +
CellDevelopmentStep authored +
Depolymerisation authored +
RNADrug authored 1
CandidateSet authored 1
ChemicalDrug authored 1
Complex authored 1
Event authored +
DefinedSet authored 1
GenomeEncodedEntity authored 1
Polymerisation authored +
EntitySet authored 1
ProteinDrug authored 1
ReactionlikeEvent authored +
Cell authored 1
Pathway authored +
InteractionEvent authored +
Reaction authored +
FailedReaction authored +
SimpleEntity authored 1
Polymer authored 1
PhysicalEntity authored 1
Drug authored 1
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
OtherEntity authored 1
CellLineagePath authored +
Event internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
GenomeEncodedEntity revised +
Event revised +
DefinedSet revised +
RNADrug revised +
Depolymerisation revised +
CellDevelopmentStep revised +
Complex revised +
ChemicalDrug revised +
CandidateSet revised +
PhysicalEntity revised +
Polymer revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
OtherEntity revised +
Drug revised +
EntitySet revised +
ProteinDrug revised +
ReactionlikeEvent revised +
Polymerisation revised +
SimpleEntity revised +
FailedReaction revised +
Reaction revised +
InteractionEvent revised +
Pathway revised +
Cell revised +
Event created 1
DefinedSet created 1
DrugActionType created 1
CellType created 1
Species created 1
NegativeRegulation created 1
ReplacedResidue created 1
ControlledVocabulary created 1
Anatomy created 1
Publication created 1
CellLineagePath created 1
RegulationReference created 1
NonsenseMutation created 1
NegativePrecedingEvent created 1
FailedReaction created 1
TranslationalModification created 1
ReactionlikeEvent created 1
EntitySet created 1
ModifiedNucleotide created 1
PositiveRegulation created 1
FragmentReplacedModification created 1
EntityFunctionalStatus created 1
NegativeGeneExpressionRegulation created 1
Polymerisation created 1
ReferenceGeneProduct created 1
_DeletedInstance created 1
ReferenceEntity created 1
DatabaseObject created 1
GO_CellularComponent created 1
Complex created 1
DeletedControlledVocabulary created 1
GeneticallyModifiedResidue created 1
Figure created 1
CandidateSet created 1
ReferenceSequence created 1
Depolymerisation created 1
RNADrug created 1
CellDevelopmentStep created 1
GroupModifiedResidue created 1
ReferenceRNASequence created 1
FrontPage created 1
ReferenceGroup created 1
EntityWithAccessionedSequence created 1
ModifiedResidue created 1
AbstractModifiedResidue created 1
StableIdentifierReleaseStatus created 1
Polymer created 1
StableIdentifier created 1
DatabaseIdentifier created 1
SimpleEntity created 1
Affiliation created 1
MarkerReference created 1
GenomeEncodedEntity created 1
FunctionalStatus created 1
InterChainCrosslinkedResidue created 1
CatalystActivityReference created 1
ReferenceTherapeutic created 1
ChemicalDrug created 1
FunctionalStatusType created 1
ReferenceMolecule created 1
IntraChainCrosslinkedResidue created 1
ReviewStatus created 1
GO_BiologicalProcess created 1
FragmentDeletionModification created 1
PositiveGeneExpressionRegulation created 1
ControlReference created 1
ExternalOntology created 1
SequenceOntology created 1
Drug created 1
GO_MolecularFunction created 1
_Release created 1
URL created 1
ReactionType created 1
Reaction created 1
Taxon created 1
InteractionEvent created 1
Disease created 1
StableIdentifierHistory created 1
PsiMod created 1
NegativePrecedingEventReason created 1
Person created 1
ReferenceDNASequence created 1
CatalystActivity created 1
Regulation created 1
Requirement created 1
FragmentModification created 1
Compartment created 1
FragmentInsertionModification created 1
Book created 1
EvidenceType created 1
CrosslinkedResidue created 1
ReferenceIsoform created 1
InstanceEdit created 1
_UpdateTracker created 1
BlackBoxEvent created 1
OtherEntity created 1
PhysicalEntity created 1
TranscriptionalModification created 1
_Deleted created 1
Summation created 1
Pathway created 1
Cell created 1
PathwayDiagram created 1
ProteinDrug created 1
LiteratureReference created 1
ReferenceDatabase created 1
IntraChainCrosslinkedResidue modified +
ReferenceMolecule modified +
ChemicalDrug modified +
ReferenceTherapeutic modified +
FunctionalStatusType modified +
ExternalOntology modified +
FragmentDeletionModification modified +
PositiveGeneExpressionRegulation modified +
ControlReference modified +
GO_BiologicalProcess modified +
ReviewStatus modified +
Affiliation modified +
MarkerReference modified +
GenomeEncodedEntity modified +
CatalystActivityReference modified +
InterChainCrosslinkedResidue modified +
FunctionalStatus modified +
NegativePrecedingEventReason modified +
PsiMod modified +
StableIdentifierHistory modified +
Disease modified +
InteractionEvent modified +
Reaction modified +
Taxon modified +
ReferenceDNASequence modified +
Person modified +
GO_MolecularFunction modified +
_Release modified +
Drug modified +
SequenceOntology modified +
URL modified +
ReactionType modified +
FragmentInsertionModification modified +
Book modified +
Compartment modified +
ReferenceIsoform modified +
CrosslinkedResidue modified +
EvidenceType modified +
Regulation modified +
CatalystActivity modified +
FragmentModification modified +
Requirement modified +
Cell modified +
PathwayDiagram modified +
Summation modified +
TranscriptionalModification modified +
_Deleted modified +
Pathway modified +
ReferenceDatabase modified +
LiteratureReference modified +
ProteinDrug modified +
BlackBoxEvent modified +
OtherEntity modified +
_UpdateTracker modified +
InstanceEdit modified +
PhysicalEntity modified +
Species modified +
NegativeRegulation modified +
CellType modified +
Publication modified +
Anatomy modified +
ControlledVocabulary modified +
ReplacedResidue modified +
Event modified +
DrugActionType modified +
DefinedSet modified +
TranslationalModification modified +
FailedReaction modified +
Polymerisation modified +
ReferenceGeneProduct modified +
NegativeGeneExpressionRegulation modified +
EntityFunctionalStatus modified +
PositiveRegulation modified +
FragmentReplacedModification modified +
ReactionlikeEvent modified +
EntitySet modified +
ModifiedNucleotide modified +
RegulationReference modified +
CellLineagePath modified +
NegativePrecedingEvent modified +
NonsenseMutation modified +
CandidateSet modified +
ReferenceSequence modified +
Figure modified +
GeneticallyModifiedResidue modified +
DeletedControlledVocabulary modified +
Complex modified +
GO_CellularComponent modified +
GroupModifiedResidue modified +
CellDevelopmentStep modified +
RNADrug modified +
Depolymerisation modified +
DatabaseObject modified +
ReferenceEntity modified +
_DeletedInstance modified +
SimpleEntity modified +
ModifiedResidue modified +
EntityWithAccessionedSequence modified +
ReferenceGroup modified +
FrontPage modified +
ReferenceRNASequence modified +
DatabaseIdentifier modified +
StableIdentifier modified +
Polymer modified +
StableIdentifierReleaseStatus modified +
AbstractModifiedResidue modified +
_Deleted replacementInstances +
CellDevelopmentStep reviewed +
Depolymerisation reviewed +
RNADrug reviewed +
CandidateSet reviewed +
ChemicalDrug reviewed +
Complex reviewed +
Event reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
ReactionlikeEvent reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
Cell reviewed +
InteractionEvent reviewed +
Reaction reviewed +
Pathway reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
Polymer reviewed +
PhysicalEntity reviewed +
Drug reviewed +
OtherEntity reviewed +
EntityWithAccessionedSequence reviewed +
BlackBoxEvent reviewed +
CellLineagePath reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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