Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Event edited +
ReactionlikeEvent edited +
DefinedSet edited +
FailedReaction edited +
Reaction edited +
Polymer edited +
GenomeEncodedEntity edited +
ProteinDrug edited +
OtherEntity edited +
PhysicalEntity edited +
SimpleEntity edited +
EntityWithAccessionedSequence edited +
Depolymerisation edited +
InteractionEvent edited +
Complex edited +
Polymerisation edited +
RNADrug edited +
CandidateSet edited +
BlackBoxEvent edited +
Cell edited +
EntitySet edited +
ChemicalDrug edited +
CellLineagePath edited +
CellDevelopmentStep edited +
Pathway edited +
Drug edited +
CellType modified +
URL modified +
GO_CellularComponent modified +
CatalystActivity modified +
PathwayDiagram modified +
Requirement modified +
OtherEntity modified +
DeletedControlledVocabulary modified +
SequenceOntology modified +
PositiveRegulation modified +
ProteinDrug modified +
RNADrug modified +
CatalystActivityReference modified +
_Deleted modified +
TranscriptionalModification modified +
AbstractModifiedResidue modified +
ChemicalDrug modified +
_UpdateTracker modified +
ModifiedNucleotide modified +
DatabaseIdentifier modified +
Publication modified +
Taxon modified +
FragmentModification modified +
EntityFunctionalStatus modified +
MarkerReference modified +
Affiliation modified +
FailedReaction modified +
ReferenceRNASequence modified +
FrontPage modified +
NegativePrecedingEvent modified +
ControlledVocabulary modified +
ReplacedResidue modified +
StableIdentifier modified +
InteractionEvent modified +
GroupModifiedResidue modified +
ReferenceMolecule modified +
RegulationReference modified +
Depolymerisation modified +
DrugActionType modified +
Species modified +
FragmentInsertionModification modified +
Pathway modified +
Compartment modified +
ReferenceIsoform modified +
EntitySet modified +
GeneticallyModifiedResidue modified +
_DeletedInstance modified +
ExternalOntology modified +
ReactionlikeEvent modified +
CrosslinkedResidue modified +
DefinedSet modified +
PositiveGeneExpressionRegulation modified +
FunctionalStatusType modified +
GO_MolecularFunction modified +
Regulation modified +
Figure modified +
RetractionStatus modified +
PsiMod modified +
NegativePrecedingEventReason modified +
LiteratureReference modified +
PhysicalEntity modified +
Book modified +
Disease modified +
Polymer modified +
_Release modified +
StableIdentifierHistory modified +
DatabaseObject modified +
ReferenceGeneProduct modified +
Person modified +
CandidateSet modified +
SimpleEntity modified +
EntityWithAccessionedSequence modified +
ReferenceTherapeutic modified +
CellLineagePath modified +
CellDevelopmentStep modified +
NonsenseMutation modified +
BlackBoxEvent modified +
InterChainCrosslinkedResidue modified +
FragmentDeletionModification modified +
Cell modified +
Anatomy modified +
InstanceEdit modified +
FunctionalStatus modified +
ControlReference modified +
Event modified +
ReferenceEntity modified +
ReferenceDNASequence modified +
EvidenceType modified +
IntraChainCrosslinkedResidue modified +
Reaction modified +
TranslationalModification modified +
ReferenceSequence modified +
GenomeEncodedEntity modified +
Complex modified +
ReviewStatus modified +
Polymerisation modified +
ReactionType modified +
StableIdentifierReleaseStatus modified +
Summation modified +
GO_BiologicalProcess modified +
ReferenceDatabase modified +
FragmentReplacedModification modified +
NegativeGeneExpressionRegulation modified +
Drug modified +
NegativeRegulation modified +
ModifiedResidue modified +
ReferenceGroup modified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
_Deleted replacementInstances +
Polymer authored 1
Reaction authored +
ProteinDrug authored 1
GenomeEncodedEntity authored 1
PhysicalEntity authored 1
OtherEntity authored 1
ReactionlikeEvent authored +
Event authored +
FailedReaction authored +
DefinedSet authored 1
BlackBoxEvent authored +
EntitySet authored 1
Cell authored 1
CellDevelopmentStep authored +
ChemicalDrug authored 1
CellLineagePath authored +
Drug authored 1
Pathway authored +
EntityWithAccessionedSequence authored 1
SimpleEntity authored 1
Depolymerisation authored +
Complex authored 1
InteractionEvent authored +
Polymerisation authored +
CandidateSet authored 1
RNADrug authored 1
IntraChainCrosslinkedResidue created 1
EvidenceType created 1
GenomeEncodedEntity created 1
ReferenceSequence created 1
TranslationalModification created 1
Reaction created 1
FunctionalStatus created 1
Anatomy created 1
InstanceEdit created 1
ReferenceDNASequence created 1
Event created 1
ReferenceEntity created 1
ControlReference created 1
Drug created 1
NegativeGeneExpressionRegulation created 1
FragmentReplacedModification created 1
ModifiedResidue created 1
ReferenceGroup created 1
NegativeRegulation created 1
ReactionType created 1
Complex created 1
ReviewStatus created 1
Polymerisation created 1
ReferenceDatabase created 1
GO_BiologicalProcess created 1
StableIdentifierReleaseStatus created 1
Summation created 1
PhysicalEntity created 1
LiteratureReference created 1
NegativePrecedingEventReason created 1
PsiMod created 1
RetractionStatus created 1
GO_MolecularFunction created 1
Regulation created 1
Figure created 1
DatabaseObject created 1
StableIdentifierHistory created 1
_Release created 1
Disease created 1
Polymer created 1
Book created 1
ExternalOntology created 1
_DeletedInstance created 1
GeneticallyModifiedResidue created 1
FunctionalStatusType created 1
PositiveGeneExpressionRegulation created 1
DefinedSet created 1
CrosslinkedResidue created 1
ReactionlikeEvent created 1
CellDevelopmentStep created 1
CellLineagePath created 1
ReferenceTherapeutic created 1
Cell created 1
FragmentDeletionModification created 1
InterChainCrosslinkedResidue created 1
NonsenseMutation created 1
BlackBoxEvent created 1
CandidateSet created 1
Person created 1
ReferenceGeneProduct created 1
EntityWithAccessionedSequence created 1
SimpleEntity created 1
FrontPage created 1
ReferenceRNASequence created 1
StableIdentifier created 1
NegativePrecedingEvent created 1
ReplacedResidue created 1
ControlledVocabulary created 1
Taxon created 1
FragmentModification created 1
EntityFunctionalStatus created 1
FailedReaction created 1
Affiliation created 1
MarkerReference created 1
Compartment created 1
FragmentInsertionModification created 1
Pathway created 1
Species created 1
EntitySet created 1
ReferenceIsoform created 1
InteractionEvent created 1
Depolymerisation created 1
DrugActionType created 1
RegulationReference created 1
ReferenceMolecule created 1
GroupModifiedResidue created 1
OtherEntity created 1
Requirement created 1
PathwayDiagram created 1
ProteinDrug created 1
PositiveRegulation created 1
SequenceOntology created 1
DeletedControlledVocabulary created 1
GO_CellularComponent created 1
URL created 1
CellType created 1
CatalystActivity created 1
DatabaseIdentifier created 1
ModifiedNucleotide created 1
ChemicalDrug created 1
_UpdateTracker created 1
Publication created 1
_Deleted created 1
CatalystActivityReference created 1
AbstractModifiedResidue created 1
TranscriptionalModification created 1
RNADrug created 1
ReactionlikeEvent internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
Cell revised +
EntitySet revised +
BlackBoxEvent revised +
Pathway revised +
Drug revised +
ChemicalDrug revised +
CellLineagePath revised +
CellDevelopmentStep revised +
Depolymerisation revised +
SimpleEntity revised +
EntityWithAccessionedSequence revised +
RNADrug revised +
CandidateSet revised +
InteractionEvent revised +
Polymerisation revised +
Complex revised +
GenomeEncodedEntity revised +
ProteinDrug revised +
Reaction revised +
Polymer revised +
OtherEntity revised +
PhysicalEntity revised +
DefinedSet revised +
FailedReaction revised +
Event revised +
ReactionlikeEvent revised +
Polymer reviewed +
Reaction reviewed +
ProteinDrug reviewed +
GenomeEncodedEntity reviewed +
PhysicalEntity reviewed +
OtherEntity reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
FailedReaction reviewed +
DefinedSet reviewed +
BlackBoxEvent reviewed +
EntitySet reviewed +
Cell reviewed +
CellDevelopmentStep reviewed +
ChemicalDrug reviewed +
CellLineagePath reviewed +
Drug reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
SimpleEntity reviewed +
Depolymerisation reviewed +
InteractionEvent reviewed +
Complex reviewed +
Polymerisation reviewed +
CandidateSet reviewed +
RNADrug reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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