Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymer revised +
InteractionEvent revised +
DefinedSet revised +
SimpleEntity revised +
Complex revised +
FailedReaction revised +
Drug revised +
Reaction revised +
BlackBoxEvent revised +
CellLineagePath revised +
ChemicalDrug revised +
CellDevelopmentStep revised +
EntitySet revised +
OtherEntity revised +
RNADrug revised +
CandidateSet revised +
Polymerisation revised +
PhysicalEntity revised +
ReactionlikeEvent revised +
Pathway revised +
Cell revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
Depolymerisation revised +
GenomeEncodedEntity revised +
Event revised +
Reaction reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
CellLineagePath reviewed +
InteractionEvent reviewed +
Polymer reviewed +
DefinedSet reviewed +
Complex reviewed +
SimpleEntity reviewed +
Drug reviewed +
FailedReaction reviewed +
Pathway reviewed +
ReactionlikeEvent reviewed +
EntityWithAccessionedSequence reviewed +
ProteinDrug reviewed +
Cell reviewed +
Event reviewed +
Depolymerisation reviewed +
GenomeEncodedEntity reviewed +
EntitySet reviewed +
CellDevelopmentStep reviewed +
OtherEntity reviewed +
RNADrug reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
PhysicalEntity reviewed +
SimpleEntity edited +
Complex edited +
FailedReaction edited +
Drug edited +
Polymer edited +
InteractionEvent edited +
DefinedSet edited +
CellLineagePath edited +
ChemicalDrug edited +
Reaction edited +
BlackBoxEvent edited +
RNADrug edited +
CandidateSet edited +
Polymerisation edited +
PhysicalEntity edited +
CellDevelopmentStep edited +
EntitySet edited +
OtherEntity edited +
ProteinDrug edited +
Cell edited +
EntityWithAccessionedSequence edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
Event edited +
ReactionlikeEvent edited +
Pathway edited +
_Deleted replacementInstances +
Disease created 1
ReferenceIsoform created 1
ReferenceGeneProduct created 1
EntityFunctionalStatus created 1
StableIdentifierHistory created 1
GeneticallyModifiedResidue created 1
PathwayDiagram created 1
StableIdentifier created 1
ReferenceTherapeutic created 1
GroupModifiedResidue created 1
FragmentModification created 1
InterChainCrosslinkedResidue created 1
CrosslinkedResidue created 1
InstanceEdit created 1
PsiMod created 1
EntityWithAccessionedSequence created 1
Summation created 1
ProteinDrug created 1
_UpdateTracker created 1
GO_BiologicalProcess created 1
ModifiedNucleotide created 1
Figure created 1
PhysicalEntity created 1
Polymerisation created 1
DrugActionType created 1
NonsenseMutation created 1
IntraChainCrosslinkedResidue created 1
TranslationalModification created 1
NegativeGeneExpressionRegulation created 1
OtherEntity created 1
ReferenceSequence created 1
EntitySet created 1
ModifiedResidue created 1
ChemicalDrug created 1
_Release created 1
ReferenceDNASequence created 1
StableIdentifierReleaseStatus created 1
Drug created 1
Regulation created 1
NegativePrecedingEvent created 1
ReferenceRNASequence created 1
Complex created 1
CatalystActivity created 1
InteractionEvent created 1
Affiliation created 1
GenomeEncodedEntity created 1
DeletedControlledVocabulary created 1
ReactionlikeEvent created 1
EvidenceType created 1
RNADrug created 1
FunctionalStatusType created 1
NegativeRegulation created 1
ReplacedResidue created 1
CellLineagePath created 1
FunctionalStatus created 1
ControlReference created 1
PositiveRegulation created 1
BlackBoxEvent created 1
ReactionType created 1
RegulationReference created 1
ControlledVocabulary created 1
PositiveGeneExpressionRegulation created 1
Species created 1
CatalystActivityReference created 1
FailedReaction created 1
SimpleEntity created 1
ReferenceDatabase created 1
ReferenceGroup created 1
Polymer created 1
FrontPage created 1
Cell created 1
SequenceOntology created 1
FragmentReplacedModification created 1
DatabaseIdentifier created 1
FragmentInsertionModification created 1
Publication created 1
Taxon created 1
MarkerReference created 1
TranscriptionalModification created 1
ExternalOntology created 1
Requirement created 1
ReferenceEntity created 1
AbstractModifiedResidue created 1
Reaction created 1
_DeletedInstance created 1
URL created 1
DefinedSet created 1
NegativePrecedingEventReason created 1
GO_CellularComponent created 1
Event created 1
Depolymerisation created 1
Anatomy created 1
Compartment created 1
Pathway created 1
CellType created 1
Person created 1
_Deleted created 1
GO_MolecularFunction created 1
Book created 1
CandidateSet created 1
LiteratureReference created 1
ReferenceMolecule created 1
DatabaseObject created 1
FragmentDeletionModification created 1
CellDevelopmentStep created 1
ChemicalDrug authored 1
CellLineagePath authored +
Reaction authored +
BlackBoxEvent authored +
Complex authored 1
SimpleEntity authored 1
Drug authored 1
FailedReaction authored +
InteractionEvent authored +
Polymer authored 1
DefinedSet authored 1
EntityWithAccessionedSequence authored 1
ProteinDrug authored 1
Cell authored 1
Event authored +
GenomeEncodedEntity authored 1
Depolymerisation authored +
Pathway authored +
ReactionlikeEvent authored +
RNADrug authored 1
CandidateSet authored 1
Polymerisation authored +
PhysicalEntity authored 1
EntitySet authored 1
CellDevelopmentStep authored +
OtherEntity authored 1
PhysicalEntity modified +
Polymerisation modified +
Figure modified +
NonsenseMutation modified +
IntraChainCrosslinkedResidue modified +
DrugActionType modified +
TranslationalModification modified +
NegativeGeneExpressionRegulation modified +
OtherEntity modified +
ModifiedResidue modified +
EntitySet modified +
ReferenceSequence modified +
PsiMod modified +
ProteinDrug modified +
Summation modified +
EntityWithAccessionedSequence modified +
GO_BiologicalProcess modified +
ModifiedNucleotide modified +
_UpdateTracker modified +
FragmentModification modified +
InterChainCrosslinkedResidue modified +
CrosslinkedResidue modified +
InstanceEdit modified +
ReferenceIsoform modified +
Disease modified +
StableIdentifierHistory modified +
EntityFunctionalStatus modified +
ReferenceGeneProduct modified +
StableIdentifier modified +
PathwayDiagram modified +
GeneticallyModifiedResidue modified +
GroupModifiedResidue modified +
ReferenceTherapeutic modified +
RNADrug modified +
EvidenceType modified +
NegativeRegulation modified +
FunctionalStatusType modified +
GenomeEncodedEntity modified +
Affiliation modified +
DeletedControlledVocabulary modified +
ReactionlikeEvent modified +
ReferenceRNASequence modified +
Drug modified +
Regulation modified +
NegativePrecedingEvent modified +
Complex modified +
CatalystActivity modified +
InteractionEvent modified +
ChemicalDrug modified +
ReferenceDNASequence modified +
_Release modified +
StableIdentifierReleaseStatus modified +
FragmentReplacedModification modified +
SequenceOntology modified +
FragmentInsertionModification modified +
Publication modified +
DatabaseIdentifier modified +
Taxon modified +
MarkerReference modified +
TranscriptionalModification modified +
FrontPage modified +
Cell modified +
FailedReaction modified +
CatalystActivityReference modified +
SimpleEntity modified +
ReferenceDatabase modified +
Polymer modified +
ReferenceGroup modified +
ReplacedResidue modified +
CellLineagePath modified +
FunctionalStatus modified +
PositiveRegulation modified +
ControlReference modified +
BlackBoxEvent modified +
ReactionType modified +
Species modified +
ControlledVocabulary modified +
PositiveGeneExpressionRegulation modified +
RegulationReference modified +
GO_MolecularFunction modified +
Person modified +
_Deleted modified +
CellType modified +
CandidateSet modified +
LiteratureReference modified +
ReferenceMolecule modified +
Book modified +
CellDevelopmentStep modified +
DatabaseObject modified +
FragmentDeletionModification modified +
Depolymerisation modified +
Event modified +
Anatomy modified +
Compartment modified +
Pathway modified +
_DeletedInstance modified +
NegativePrecedingEventReason modified +
DefinedSet modified +
URL modified +
GO_CellularComponent modified +
ExternalOntology modified +
AbstractModifiedResidue modified +
Reaction modified +
ReferenceEntity modified +
Requirement modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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