Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
EntitySet reviewed +
Depolymerisation reviewed +
CellDevelopmentStep reviewed +
SimpleEntity reviewed +
CandidateSet reviewed +
RNADrug reviewed +
InteractionEvent reviewed +
Cell reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
Pathway reviewed +
OtherEntity reviewed +
Complex reviewed +
CellLineagePath reviewed +
ProteinDrug reviewed +
GenomeEncodedEntity reviewed +
PhysicalEntity reviewed +
Event reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
Drug reviewed +
DefinedSet reviewed +
Polymerisation reviewed +
FailedReaction reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
NegativePrecedingEvent modified +
StableIdentifierHistory modified +
Polymerisation modified +
ReferenceRNASequence modified +
Taxon modified +
Event modified +
Summation modified +
FragmentInsertionModification modified +
Polymer modified +
PsiMod modified +
GenomeEncodedEntity modified +
ExternalOntology modified +
OtherEntity modified +
ControlReference modified +
RetractionStatus modified +
Disease modified +
ReferenceMolecule modified +
NegativeGeneExpressionRegulation modified +
DatabaseObject modified +
SequenceOntology modified +
CellDevelopmentStep modified +
Species modified +
URL modified +
Figure modified +
ReferenceGeneProduct modified +
Reaction modified +
EntityWithAccessionedSequence modified +
Regulation modified +
FragmentModification modified +
NonsenseMutation modified +
Drug modified +
CrosslinkedResidue modified +
_DeletedInstance modified +
_UpdateTracker modified +
TranscriptionalModification modified +
PhysicalEntity modified +
Anatomy modified +
Compartment modified +
ModifiedResidue modified +
ReactionlikeEvent modified +
Pathway modified +
PositiveGeneExpressionRegulation modified +
CellType modified +
ReferenceIsoform modified +
Cell modified +
EntitySet modified +
TranslationalModification modified +
ReferenceEntity modified +
DefinedSet modified +
FragmentReplacedModification modified +
FailedReaction modified +
CatalystActivityReference modified +
ControlledVocabulary modified +
ReferenceSequence modified +
GO_CellularComponent modified +
InstanceEdit modified +
EntityFunctionalStatus modified +
GeneticallyModifiedResidue modified +
BlackBoxEvent modified +
ModifiedNucleotide modified +
FrontPage modified +
CatalystActivity modified +
ReplacedResidue modified +
StableIdentifier modified +
Book modified +
InterChainCrosslinkedResidue modified +
AbstractModifiedResidue modified +
Complex modified +
ReferenceGroup modified +
Requirement modified +
ReactionType modified +
PositiveRegulation modified +
_Release modified +
Depolymerisation modified +
ReferenceDatabase modified +
SimpleEntity modified +
CandidateSet modified +
RNADrug modified +
DatabaseIdentifier modified +
FunctionalStatusType modified +
LiteratureReference modified +
EvidenceType modified +
GO_MolecularFunction modified +
ReferenceDNASequence modified +
RegulationReference modified +
DrugActionType modified +
DeletedControlledVocabulary modified +
NegativePrecedingEventReason modified +
GO_BiologicalProcess modified +
GroupModifiedResidue modified +
_Deleted modified +
ReferenceTherapeutic modified +
ReviewStatus modified +
ProteinDrug modified +
CellLineagePath modified +
NegativeRegulation modified +
Publication modified +
FragmentDeletionModification modified +
FunctionalStatus modified +
Person modified +
ChemicalDrug modified +
MarkerReference modified +
PathwayDiagram modified +
IntraChainCrosslinkedResidue modified +
StableIdentifierReleaseStatus modified +
Affiliation modified +
InteractionEvent modified +
_Deleted replacementInstances +
Cell edited +
ChemicalDrug edited +
EntitySet edited +
Depolymerisation edited +
RNADrug edited +
InteractionEvent edited +
CellDevelopmentStep edited +
CandidateSet edited +
SimpleEntity edited +
Complex edited +
OtherEntity edited +
ReactionlikeEvent edited +
Pathway edited +
BlackBoxEvent edited +
Event edited +
Polymer edited +
CellLineagePath edited +
ProteinDrug edited +
PhysicalEntity edited +
GenomeEncodedEntity edited +
DefinedSet edited +
FailedReaction edited +
Reaction edited +
EntityWithAccessionedSequence edited +
Polymerisation edited +
Drug edited +
Event structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
Reaction structureModified +
FailedReaction structureModified +
Pathway structureModified +
ReactionlikeEvent structureModified +
Reaction authored +
FailedReaction authored +
EntityWithAccessionedSequence authored 1
Polymerisation authored +
DefinedSet authored 1
Drug authored 1
Polymer authored 1
BlackBoxEvent authored +
Event authored +
GenomeEncodedEntity authored 1
PhysicalEntity authored 1
CellLineagePath authored +
ProteinDrug authored 1
Complex authored 1
OtherEntity authored 1
Pathway authored +
ReactionlikeEvent authored +
Cell authored 1
ChemicalDrug authored 1
InteractionEvent authored +
RNADrug authored 1
CellDevelopmentStep authored +
SimpleEntity authored 1
CandidateSet authored 1
EntitySet authored 1
Depolymerisation authored +
GO_MolecularFunction created 1
FunctionalStatusType created 1
EvidenceType created 1
LiteratureReference created 1
ReferenceDNASequence created 1
DeletedControlledVocabulary created 1
RegulationReference created 1
DrugActionType created 1
ProteinDrug created 1
ReviewStatus created 1
ReferenceTherapeutic created 1
CellLineagePath created 1
GroupModifiedResidue created 1
_Deleted created 1
GO_BiologicalProcess created 1
NegativePrecedingEventReason created 1
NegativeRegulation created 1
FragmentDeletionModification created 1
Publication created 1
FunctionalStatus created 1
Person created 1
PathwayDiagram created 1
MarkerReference created 1
ChemicalDrug created 1
IntraChainCrosslinkedResidue created 1
StableIdentifierReleaseStatus created 1
InteractionEvent created 1
Affiliation created 1
DefinedSet created 1
ReferenceEntity created 1
FailedReaction created 1
FragmentReplacedModification created 1
ReferenceSequence created 1
ControlledVocabulary created 1
GO_CellularComponent created 1
CatalystActivityReference created 1
InstanceEdit created 1
BlackBoxEvent created 1
GeneticallyModifiedResidue created 1
EntityFunctionalStatus created 1
ModifiedNucleotide created 1
FrontPage created 1
CatalystActivity created 1
Book created 1
StableIdentifier created 1
ReplacedResidue created 1
AbstractModifiedResidue created 1
InterChainCrosslinkedResidue created 1
ReferenceGroup created 1
Complex created 1
Requirement created 1
PositiveRegulation created 1
ReactionType created 1
_Release created 1
Depolymerisation created 1
ReferenceDatabase created 1
RNADrug created 1
DatabaseIdentifier created 1
SimpleEntity created 1
CandidateSet created 1
ReferenceGeneProduct created 1
Reaction created 1
EntityWithAccessionedSequence created 1
FragmentModification created 1
Regulation created 1
Drug created 1
NonsenseMutation created 1
CrosslinkedResidue created 1
_UpdateTracker created 1
_DeletedInstance created 1
PhysicalEntity created 1
TranscriptionalModification created 1
Compartment created 1
Anatomy created 1
ModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
ReactionlikeEvent created 1
Pathway created 1
CellType created 1
ReferenceIsoform created 1
Cell created 1
EntitySet created 1
TranslationalModification created 1
StableIdentifierHistory created 1
NegativePrecedingEvent created 1
Polymerisation created 1
ReferenceRNASequence created 1
Taxon created 1
Summation created 1
Event created 1
Polymer created 1
FragmentInsertionModification created 1
PsiMod created 1
GenomeEncodedEntity created 1
ExternalOntology created 1
OtherEntity created 1
ControlReference created 1
RetractionStatus created 1
ReferenceMolecule created 1
NegativeGeneExpressionRegulation created 1
Disease created 1
SequenceOntology created 1
DatabaseObject created 1
URL created 1
Figure created 1
Species created 1
CellDevelopmentStep created 1
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
Polymerisation revised +
Reaction revised +
FailedReaction revised +
EntityWithAccessionedSequence revised +
DefinedSet revised +
Drug revised +
Polymer revised +
Event revised +
BlackBoxEvent revised +
PhysicalEntity revised +
GenomeEncodedEntity revised +
ProteinDrug revised +
CellLineagePath revised +
OtherEntity revised +
Complex revised +
Pathway revised +
ReactionlikeEvent revised +
Cell revised +
ChemicalDrug revised +
CellDevelopmentStep revised +
SimpleEntity revised +
CandidateSet revised +
InteractionEvent revised +
RNADrug revised +
Depolymerisation revised +
EntitySet revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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