Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InteractionEvent structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
Pathway structureModified +
Reaction structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
GO_CellularComponent modified +
Complex modified +
CellLineagePath modified +
_UpdateTracker modified +
ModifiedNucleotide modified +
ReferenceTherapeutic modified +
ReferenceGroup modified +
ReferenceEntity modified +
Anatomy modified +
FragmentModification modified +
EntitySet modified +
Compartment modified +
Book modified +
FragmentDeletionModification modified +
ExternalOntology modified +
NonsenseMutation modified +
DefinedSet modified +
RNADrug modified +
Person modified +
InteractionEvent modified +
CatalystActivity modified +
DatabaseIdentifier modified +
Event modified +
ReactionlikeEvent modified +
EntityWithAccessionedSequence modified +
NegativePrecedingEvent modified +
RegulationReference modified +
DeletedControlledVocabulary modified +
NegativePrecedingEventReason modified +
CellType modified +
Affiliation modified +
PathwayDiagram modified +
URL modified +
PsiMod modified +
TranslationalModification modified +
ModifiedResidue modified +
LiteratureReference modified +
Polymer modified +
PhysicalEntity modified +
DatabaseObject modified +
Drug modified +
GO_BiologicalProcess modified +
CrosslinkedResidue modified +
MarkerReference modified +
Figure modified +
ReactionType modified +
Pathway modified +
_DeletedInstance modified +
Reaction modified +
Depolymerisation modified +
StableIdentifierHistory modified +
ReviewStatus modified +
ReferenceGeneProduct modified +
_Release modified +
FailedReaction modified +
FunctionalStatus modified +
FragmentReplacedModification modified +
ReplacedResidue modified +
ControlledVocabulary modified +
TranscriptionalModification modified +
StableIdentifierReleaseStatus modified +
NegativeRegulation modified +
ReferenceIsoform modified +
ReferenceDNASequence modified +
Summation modified +
GenomeEncodedEntity modified +
Publication modified +
SequenceOntology modified +
InstanceEdit modified +
Taxon modified +
CandidateSet modified +
GeneticallyModifiedResidue modified +
RetractionStatus modified +
Disease modified +
CellDevelopmentStep modified +
ReferenceRNASequence modified +
Regulation modified +
StableIdentifier modified +
EntityFunctionalStatus modified +
AbstractModifiedResidue modified +
Cell modified +
FunctionalStatusType modified +
GO_MolecularFunction modified +
CatalystActivityReference modified +
OtherEntity modified +
IntraChainCrosslinkedResidue modified +
Species modified +
Requirement modified +
EvidenceType modified +
PositiveGeneExpressionRegulation modified +
_Deleted modified +
ReferenceMolecule modified +
DrugActionType modified +
GroupModifiedResidue modified +
BlackBoxEvent modified +
SimpleEntity modified +
FragmentInsertionModification modified +
PositiveRegulation modified +
Polymerisation modified +
ReferenceDatabase modified +
NegativeGeneExpressionRegulation modified +
ProteinDrug modified +
FrontPage modified +
ChemicalDrug modified +
ControlReference modified +
ReferenceSequence modified +
InterChainCrosslinkedResidue modified +
Polymerisation internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Complex revised +
CellLineagePath revised +
Cell revised +
FailedReaction revised +
OtherEntity revised +
Polymer revised +
EntitySet revised +
Drug revised +
PhysicalEntity revised +
RNADrug revised +
DefinedSet revised +
InteractionEvent revised +
GenomeEncodedEntity revised +
Event revised +
BlackBoxEvent revised +
SimpleEntity revised +
EntityWithAccessionedSequence revised +
ReactionlikeEvent revised +
Polymerisation revised +
ProteinDrug revised +
Pathway revised +
ChemicalDrug revised +
CandidateSet revised +
Reaction revised +
Depolymerisation revised +
CellDevelopmentStep revised +
_Deleted replacementInstances +
FailedReaction authored +
Cell authored 1
CellLineagePath authored +
Complex authored 1
OtherEntity authored 1
Polymer authored 1
PhysicalEntity authored 1
EntitySet authored 1
Drug authored 1
InteractionEvent authored +
RNADrug authored 1
DefinedSet authored 1
ReactionlikeEvent authored +
SimpleEntity authored 1
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
GenomeEncodedEntity authored 1
Event authored +
Pathway authored +
ProteinDrug authored 1
ChemicalDrug authored 1
Polymerisation authored +
CellDevelopmentStep authored +
Depolymerisation authored +
Reaction authored +
CandidateSet authored 1
Polymer reviewed +
EntitySet reviewed +
PhysicalEntity reviewed +
Drug reviewed +
Complex reviewed +
CellLineagePath reviewed +
FailedReaction reviewed +
Cell reviewed +
OtherEntity reviewed +
Polymerisation reviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
Pathway reviewed +
CandidateSet reviewed +
Reaction reviewed +
Depolymerisation reviewed +
CellDevelopmentStep reviewed +
RNADrug reviewed +
DefinedSet reviewed +
InteractionEvent reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
ReactionlikeEvent reviewed +
Polymerisation edited +
ProteinDrug edited +
Pathway edited +
ChemicalDrug edited +
CandidateSet edited +
Reaction edited +
Depolymerisation edited +
CellDevelopmentStep edited +
DefinedSet edited +
RNADrug edited +
InteractionEvent edited +
Event edited +
GenomeEncodedEntity edited +
BlackBoxEvent edited +
SimpleEntity edited +
ReactionlikeEvent edited +
EntityWithAccessionedSequence edited +
Polymer edited +
PhysicalEntity edited +
EntitySet edited +
Drug edited +
Complex edited +
CellLineagePath edited +
Cell edited +
FailedReaction edited +
OtherEntity edited +
Affiliation created 1
NegativePrecedingEvent created 1
DeletedControlledVocabulary created 1
RegulationReference created 1
CellType created 1
NegativePrecedingEventReason created 1
Event created 1
DatabaseIdentifier created 1
CatalystActivity created 1
EntityWithAccessionedSequence created 1
ReactionlikeEvent created 1
DefinedSet created 1
RNADrug created 1
InteractionEvent created 1
Person created 1
EntitySet created 1
Compartment created 1
ExternalOntology created 1
FragmentDeletionModification created 1
NonsenseMutation created 1
Book created 1
ReferenceTherapeutic created 1
ReferenceGroup created 1
ReferenceEntity created 1
Anatomy created 1
FragmentModification created 1
ModifiedNucleotide created 1
Complex created 1
GO_CellularComponent created 1
_UpdateTracker created 1
CellLineagePath created 1
StableIdentifierHistory created 1
Reaction created 1
Depolymerisation created 1
_DeletedInstance created 1
ReactionType created 1
Pathway created 1
GO_BiologicalProcess created 1
CrosslinkedResidue created 1
Figure created 1
MarkerReference created 1
Drug created 1
PhysicalEntity created 1
DatabaseObject created 1
LiteratureReference created 1
ModifiedResidue created 1
Polymer created 1
TranslationalModification created 1
URL created 1
PathwayDiagram created 1
PsiMod created 1
RetractionStatus created 1
GeneticallyModifiedResidue created 1
CandidateSet created 1
ReferenceRNASequence created 1
Disease created 1
CellDevelopmentStep created 1
InstanceEdit created 1
Taxon created 1
GenomeEncodedEntity created 1
SequenceOntology created 1
Publication created 1
Summation created 1
ReferenceIsoform created 1
NegativeRegulation created 1
ReferenceDNASequence created 1
ControlledVocabulary created 1
TranscriptionalModification created 1
ReplacedResidue created 1
StableIdentifierReleaseStatus created 1
FragmentReplacedModification created 1
ReviewStatus created 1
FunctionalStatus created 1
FailedReaction created 1
_Release created 1
ReferenceGeneProduct created 1
ReferenceSequence created 1
InterChainCrosslinkedResidue created 1
NegativeGeneExpressionRegulation created 1
ReferenceDatabase created 1
FragmentInsertionModification created 1
Polymerisation created 1
PositiveRegulation created 1
ControlReference created 1
ProteinDrug created 1
FrontPage created 1
ChemicalDrug created 1
GroupModifiedResidue created 1
DrugActionType created 1
SimpleEntity created 1
BlackBoxEvent created 1
ReferenceMolecule created 1
_Deleted created 1
PositiveGeneExpressionRegulation created 1
EvidenceType created 1
Requirement created 1
Species created 1
GO_MolecularFunction created 1
CatalystActivityReference created 1
OtherEntity created 1
IntraChainCrosslinkedResidue created 1
Regulation created 1
StableIdentifier created 1
FunctionalStatusType created 1
Cell created 1
AbstractModifiedResidue created 1
EntityFunctionalStatus created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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