Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances

Class name Attribute name Cardinality
Event structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Reaction structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
DeletedControlledVocabulary modified +
Species modified +
DatabaseIdentifier modified +
ReviewStatus modified +
PhysicalEntity modified +
Person modified +
OtherEntity modified +
FunctionalStatusType modified +
Event modified +
EntityFunctionalStatus modified +
InstanceEdit modified +
ReferenceMolecule modified +
ReferenceIsoform modified +
ExternalOntology modified +
GO_MolecularFunction modified +
Complex modified +
Pathway modified +
FragmentInsertionModification modified +
NegativeRegulation modified +
FragmentReplacedModification modified +
Affiliation modified +
Figure modified +
NonsenseMutation modified +
ModifiedNucleotide modified +
InteractionEvent modified +
InterChainCrosslinkedResidue modified +
ReferenceTherapeutic modified +
ReactionType modified +
ChemicalDrug modified +
SimpleEntity modified +
RNADrug modified +
_Release modified +
ReferenceGeneProduct modified +
Book modified +
AbstractModifiedResidue modified +
Cell modified +
CatalystActivityReference modified +
CandidateSet modified +
IntraChainCrosslinkedResidue modified +
ControlReference modified +
URL modified +
Reaction modified +
CellType modified +
PathwayDiagram modified +
CellDevelopmentStep modified +
ReplacedResidue modified +
GroupModifiedResidue modified +
ModifiedResidue modified +
Anatomy modified +
NegativePrecedingEventReason modified +
Taxon modified +
Publication modified +
ReactionlikeEvent modified +
PositiveGeneExpressionRegulation modified +
TranscriptionalModification modified +
Depolymerisation modified +
_DeletedInstance modified +
ReferenceEntity modified +
NegativeGeneExpressionRegulation modified +
FrontPage modified +
EntityWithAccessionedSequence modified +
LiteratureReference modified +
GenomeEncodedEntity modified +
_Deleted modified +
StableIdentifier modified +
FragmentDeletionModification modified +
ProteinDrug modified +
DefinedSet modified +
TranslationalModification modified +
GO_CellularComponent modified +
PsiMod modified +
FailedReaction modified +
EntitySet modified +
_UpdateTracker modified +
FragmentModification modified +
StableIdentifierReleaseStatus modified +
CatalystActivity modified +
PositiveRegulation modified +
ReferenceDNASequence modified +
MarkerReference modified +
Summation modified +
EvidenceType modified +
ReferenceRNASequence modified +
CrosslinkedResidue modified +
StableIdentifierHistory modified +
GeneticallyModifiedResidue modified +
ReferenceSequence modified +
DatabaseObject modified +
Compartment modified +
FunctionalStatus modified +
DrugActionType modified +
Polymer modified +
Disease modified +
ReferenceDatabase modified +
RegulationReference modified +
Regulation modified +
Polymerisation modified +
Requirement modified +
ControlledVocabulary modified +
GO_BiologicalProcess modified +
NegativePrecedingEvent modified +
Drug modified +
CellLineagePath modified +
SequenceOntology modified +
ReferenceGroup modified +
BlackBoxEvent modified +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Drug edited +
ReactionlikeEvent edited +
CellLineagePath edited +
ChemicalDrug edited +
SimpleEntity edited +
BlackBoxEvent edited +
Depolymerisation edited +
RNADrug edited +
InteractionEvent edited +
FailedReaction edited +
EntitySet edited +
Polymerisation edited +
ProteinDrug edited +
DefinedSet edited +
CellDevelopmentStep edited +
Complex edited +
Pathway edited +
Polymer edited +
GenomeEncodedEntity edited +
Reaction edited +
CandidateSet edited +
Event edited +
OtherEntity edited +
EntityWithAccessionedSequence edited +
Cell edited +
PhysicalEntity edited +
AbstractModifiedResidue created 1
Book created 1
Cell created 1
URL created 1
IntraChainCrosslinkedResidue created 1
ControlReference created 1
CandidateSet created 1
CatalystActivityReference created 1
CellType created 1
Reaction created 1
CellDevelopmentStep created 1
PathwayDiagram created 1
ModifiedResidue created 1
GroupModifiedResidue created 1
ReplacedResidue created 1
Taxon created 1
Anatomy created 1
NegativePrecedingEventReason created 1
Depolymerisation created 1
TranscriptionalModification created 1
_DeletedInstance created 1
PositiveGeneExpressionRegulation created 1
ReactionlikeEvent created 1
Publication created 1
PhysicalEntity created 1
ReviewStatus created 1
DatabaseIdentifier created 1
Species created 1
DeletedControlledVocabulary created 1
OtherEntity created 1
Person created 1
FunctionalStatusType created 1
Event created 1
EntityFunctionalStatus created 1
ReferenceIsoform created 1
ExternalOntology created 1
InstanceEdit created 1
ReferenceMolecule created 1
FragmentInsertionModification created 1
NegativeRegulation created 1
Pathway created 1
Complex created 1
GO_MolecularFunction created 1
Figure created 1
Affiliation created 1
FragmentReplacedModification created 1
InteractionEvent created 1
InterChainCrosslinkedResidue created 1
ModifiedNucleotide created 1
NonsenseMutation created 1
ReferenceGeneProduct created 1
RNADrug created 1
_Release created 1
SimpleEntity created 1
ChemicalDrug created 1
ReactionType created 1
ReferenceTherapeutic created 1
Summation created 1
MarkerReference created 1
GeneticallyModifiedResidue created 1
CrosslinkedResidue created 1
StableIdentifierHistory created 1
ReferenceSequence created 1
ReferenceRNASequence created 1
EvidenceType created 1
Compartment created 1
DatabaseObject created 1
Disease created 1
Polymer created 1
DrugActionType created 1
FunctionalStatus created 1
Regulation created 1
RegulationReference created 1
ReferenceDatabase created 1
GO_BiologicalProcess created 1
ControlledVocabulary created 1
Requirement created 1
Polymerisation created 1
NegativePrecedingEvent created 1
BlackBoxEvent created 1
ReferenceGroup created 1
SequenceOntology created 1
CellLineagePath created 1
Drug created 1
NegativeGeneExpressionRegulation created 1
ReferenceEntity created 1
EntityWithAccessionedSequence created 1
FrontPage created 1
LiteratureReference created 1
GenomeEncodedEntity created 1
FragmentDeletionModification created 1
StableIdentifier created 1
_Deleted created 1
DefinedSet created 1
ProteinDrug created 1
EntitySet created 1
_UpdateTracker created 1
FailedReaction created 1
PsiMod created 1
GO_CellularComponent created 1
TranslationalModification created 1
ReferenceDNASequence created 1
CatalystActivity created 1
PositiveRegulation created 1
FragmentModification created 1
StableIdentifierReleaseStatus created 1
Complex revised +
CellDevelopmentStep revised +
Pathway revised +
ProteinDrug revised +
Polymerisation revised +
DefinedSet revised +
FailedReaction revised +
EntitySet revised +
InteractionEvent revised +
ReactionlikeEvent revised +
Drug revised +
RNADrug revised +
Depolymerisation revised +
BlackBoxEvent revised +
ChemicalDrug revised +
CellLineagePath revised +
SimpleEntity revised +
PhysicalEntity revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
Cell revised +
CandidateSet revised +
Event revised +
GenomeEncodedEntity revised +
Polymer revised +
Reaction revised +
Depolymerisation reviewed +
RNADrug reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
SimpleEntity reviewed +
CellLineagePath reviewed +
ReactionlikeEvent reviewed +
Drug reviewed +
InteractionEvent reviewed +
EntitySet reviewed +
FailedReaction reviewed +
DefinedSet reviewed +
ProteinDrug reviewed +
Polymerisation reviewed +
Pathway reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
Reaction reviewed +
GenomeEncodedEntity reviewed +
Polymer reviewed +
Event reviewed +
CandidateSet reviewed +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
Polymer authored 1
GenomeEncodedEntity authored 1
Reaction authored +
CandidateSet authored 1
Event authored +
OtherEntity authored 1
Cell authored 1
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
Drug authored 1
ReactionlikeEvent authored +
SimpleEntity authored 1
CellLineagePath authored +
ChemicalDrug authored 1
Depolymerisation authored +
RNADrug authored 1
BlackBoxEvent authored +
EntitySet authored 1
FailedReaction authored +
InteractionEvent authored +
ProteinDrug authored 1
Polymerisation authored +
DefinedSet authored 1
CellDevelopmentStep authored +
Complex authored 1
Pathway authored +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.