Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Cell reviewed +
ChemicalDrug reviewed +
RNADrug reviewed +
Depolymerisation reviewed +
OtherEntity reviewed +
Drug reviewed +
InteractionEvent reviewed +
FailedReaction reviewed +
Complex reviewed +
Polymerisation reviewed +
Polymer reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
ProteinDrug reviewed +
Event reviewed +
EntityWithAccessionedSequence reviewed +
DefinedSet reviewed +
Pathway reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
CandidateSet reviewed +
PhysicalEntity reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
Reaction reviewed +
EntitySet reviewed +
ProteinDrug revised +
Event revised +
EntityWithAccessionedSequence revised +
Pathway revised +
DefinedSet revised +
GenomeEncodedEntity revised +
CandidateSet revised +
BlackBoxEvent revised +
ReactionlikeEvent revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
Reaction revised +
EntitySet revised +
ChemicalDrug revised +
Cell revised +
Depolymerisation revised +
RNADrug revised +
OtherEntity revised +
Drug revised +
Complex revised +
FailedReaction revised +
InteractionEvent revised +
Polymer revised +
Polymerisation revised +
SimpleEntity revised +
CellLineagePath revised +
Drug authored 1
OtherEntity authored 1
Depolymerisation authored +
RNADrug authored 1
ChemicalDrug authored 1
Cell authored 1
SimpleEntity authored 1
CellLineagePath authored +
Polymerisation authored +
Polymer authored 1
Complex authored 1
FailedReaction authored +
InteractionEvent authored +
GenomeEncodedEntity authored 1
Pathway authored +
DefinedSet authored 1
EntityWithAccessionedSequence authored 1
Event authored +
ProteinDrug authored 1
EntitySet authored 1
Reaction authored +
CellDevelopmentStep authored +
ReactionlikeEvent authored +
PhysicalEntity authored 1
CandidateSet authored 1
BlackBoxEvent authored +
EntityWithAccessionedSequence created 1
GO_CellularComponent created 1
SequenceOntology created 1
EvidenceType created 1
CatalystActivity created 1
ReactionType created 1
GenomeEncodedEntity created 1
NegativePrecedingEventReason created 1
_UpdateTracker created 1
CandidateSet created 1
ReactionlikeEvent created 1
Book created 1
DatabaseIdentifier created 1
EntitySet created 1
RNADrug created 1
ReferenceGroup created 1
Depolymerisation created 1
DeletedControlledVocabulary created 1
DatabaseObject created 1
FrontPage created 1
ReferenceRNASequence created 1
PathwayDiagram created 1
CellType created 1
Compartment created 1
CellLineagePath created 1
Event created 1
ProteinDrug created 1
ReferenceDNASequence created 1
ControlledVocabulary created 1
DrugActionType created 1
EntityFunctionalStatus created 1
CrosslinkedResidue created 1
PhysicalEntityCellType created 1
FragmentInsertionModification created 1
CellDevelopmentStep created 1
ExternalOntology created 1
CatalystActivityReference created 1
FunctionalStatusType created 1
Disease created 1
FunctionalStatus created 1
ReviewStatus created 1
Figure created 1
FragmentDeletionModification created 1
OtherEntity created 1
FailedReaction created 1
InteractionEvent created 1
GO_MolecularFunction created 1
PositiveRegulation created 1
ControlReference created 1
ModifiedResidue created 1
LiteratureReference created 1
Affiliation created 1
ReferenceDatabase created 1
FragmentReplacedModification created 1
DefinedSet created 1
Pathway created 1
GroupModifiedResidue created 1
Publication created 1
PhysicalEntity created 1
PsiMod created 1
Reaction created 1
NegativeRegulation created 1
Person created 1
Species created 1
PositiveGeneExpressionRegulation created 1
TranslationalModification created 1
MarkerReference created 1
Drug created 1
ReferenceGeneProduct created 1
StableIdentifier created 1
Requirement created 1
_DeletedInstance created 1
Taxon created 1
Complex created 1
Polymerisation created 1
Polymer created 1
StableIdentifierReleaseStatus created 1
SimpleEntity created 1
NegativePrecedingEvent created 1
RegulationReference created 1
TranscriptionalModification created 1
ReferenceMolecule created 1
ModifiedNucleotide created 1
GeneticallyModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
AbstractModifiedResidue created 1
Regulation created 1
ReferenceSequence created 1
BlackBoxEvent created 1
NonsenseMutation created 1
ReplacedResidue created 1
Anatomy created 1
ReferenceTherapeutic created 1
IntraChainCrosslinkedResidue created 1
Summation created 1
InterChainCrosslinkedResidue created 1
FragmentModification created 1
Cell created 1
RetractionStatus created 1
ChemicalDrug created 1
ReferenceEntity created 1
InstanceEdit created 1
_Release created 1
URL created 1
StableIdentifierHistory created 1
GO_BiologicalProcess created 1
ReferenceIsoform created 1
_Deleted created 1
Complex edited +
InteractionEvent edited +
FailedReaction edited +
Polymerisation edited +
Polymer edited +
SimpleEntity edited +
CellLineagePath edited +
ChemicalDrug edited +
Cell edited +
Depolymerisation edited +
RNADrug edited +
OtherEntity edited +
Drug edited +
CandidateSet edited +
BlackBoxEvent edited +
ReactionlikeEvent edited +
PhysicalEntity edited +
CellDevelopmentStep edited +
Reaction edited +
EntitySet edited +
ProteinDrug edited +
Event edited +
EntityWithAccessionedSequence edited +
Pathway edited +
DefinedSet edited +
GenomeEncodedEntity edited +
FragmentReplacedModification modified +
DefinedSet modified +
Pathway modified +
PhysicalEntity modified +
Publication modified +
PsiMod modified +
GroupModifiedResidue modified +
Reaction modified +
PositiveGeneExpressionRegulation modified +
MarkerReference modified +
TranslationalModification modified +
NegativeRegulation modified +
Species modified +
Person modified +
StableIdentifier modified +
ReferenceGeneProduct modified +
Drug modified +
Requirement modified +
Polymerisation modified +
Polymer modified +
StableIdentifierReleaseStatus modified +
_DeletedInstance modified +
Taxon modified +
Complex modified +
NegativePrecedingEvent modified +
RegulationReference modified +
SimpleEntity modified +
TranscriptionalModification modified +
GeneticallyModifiedResidue modified +
NegativeGeneExpressionRegulation modified +
AbstractModifiedResidue modified +
Regulation modified +
ReferenceMolecule modified +
ModifiedNucleotide modified +
ReplacedResidue modified +
Anatomy modified +
BlackBoxEvent modified +
ReferenceSequence modified +
NonsenseMutation modified +
InterChainCrosslinkedResidue modified +
FragmentModification modified +
ReferenceTherapeutic modified +
IntraChainCrosslinkedResidue modified +
Summation modified +
Cell modified +
RetractionStatus modified +
ChemicalDrug modified +
ReferenceEntity modified +
StableIdentifierHistory modified +
GO_BiologicalProcess modified +
InstanceEdit modified +
URL modified +
_Release modified +
_Deleted modified +
ReferenceIsoform modified +
EntityWithAccessionedSequence modified +
GO_CellularComponent modified +
SequenceOntology modified +
EvidenceType modified +
GenomeEncodedEntity modified +
ReactionType modified +
CatalystActivity modified +
ReactionlikeEvent modified +
_UpdateTracker modified +
NegativePrecedingEventReason modified +
CandidateSet modified +
DatabaseIdentifier modified +
EntitySet modified +
Book modified +
ReferenceGroup modified +
RNADrug modified +
Depolymerisation modified +
FrontPage modified +
ReferenceRNASequence modified +
DeletedControlledVocabulary modified +
DatabaseObject modified +
PathwayDiagram modified +
CellType modified +
Compartment modified +
CellLineagePath modified +
ReferenceDNASequence modified +
ControlledVocabulary modified +
ProteinDrug modified +
Event modified +
EntityFunctionalStatus modified +
DrugActionType modified +
PhysicalEntityCellType modified +
FragmentInsertionModification modified +
CrosslinkedResidue modified +
FunctionalStatusType modified +
CellDevelopmentStep modified +
ExternalOntology modified +
CatalystActivityReference modified +
ReviewStatus modified +
Figure modified +
Disease modified +
FunctionalStatus modified +
OtherEntity modified +
FragmentDeletionModification modified +
ModifiedResidue modified +
InteractionEvent modified +
PositiveRegulation modified +
GO_MolecularFunction modified +
FailedReaction modified +
ControlReference modified +
ReferenceDatabase modified +
LiteratureReference modified +
Affiliation modified +
_Deleted replacementInstances +
InteractionEvent structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
Event structureModified +
Depolymerisation structureModified +
Pathway structureModified +
Pathway internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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