Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances

Class name Attribute name Cardinality
FailedReaction reviewed +
ReactionlikeEvent reviewed +
RNADrug reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
SimpleEntity reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
Polymerisation reviewed +
Reaction reviewed +
Complex reviewed +
Polymer reviewed +
CellLineagePath reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
OtherEntity reviewed +
Drug reviewed +
EntitySet reviewed +
Event reviewed +
InteractionEvent reviewed +
Depolymerisation reviewed +
ProteinDrug reviewed +
Cell reviewed +
FailedReaction revised +
BlackBoxEvent revised +
SimpleEntity revised +
ReactionlikeEvent revised +
RNADrug revised +
CellDevelopmentStep revised +
Pathway revised +
Polymerisation revised +
Reaction revised +
PhysicalEntity revised +
GenomeEncodedEntity revised +
DefinedSet revised +
ChemicalDrug revised +
CellLineagePath revised +
Polymer revised +
Complex revised +
CandidateSet revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
Drug revised +
InteractionEvent revised +
EntitySet revised +
Event revised +
Depolymerisation revised +
Cell revised +
ProteinDrug revised +
Polymer modified +
CellLineagePath modified +
ReferenceEntity modified +
ModifiedNucleotide modified +
Reaction modified +
Species modified +
ReactionlikeEvent modified +
ReferenceTherapeutic modified +
Requirement modified +
NonsenseMutation modified +
ProteinDrug modified +
Cell modified +
GO_MolecularFunction modified +
Person modified +
FunctionalStatus modified +
ReferenceDatabase modified +
FragmentInsertionModification modified +
DatabaseObject modified +
Drug modified +
ReferenceGeneProduct modified +
ReferenceMolecule modified +
ReferenceSequence modified +
StableIdentifier modified +
EntityWithAccessionedSequence modified +
OtherEntity modified +
ReferenceIsoform modified +
ExternalOntology modified +
CatalystActivity modified +
StableIdentifierReleaseStatus modified +
DeletedControlledVocabulary modified +
_DeletedInstance modified +
FragmentReplacedModification modified +
CellDevelopmentStep modified +
PathwayDiagram modified +
StableIdentifierHistory modified +
PositiveRegulation modified +
SimpleEntity modified +
PsiMod modified +
FrontPage modified +
NegativeGeneExpressionRegulation modified +
ReplacedResidue modified +
GO_BiologicalProcess modified +
GroupModifiedResidue modified +
Depolymerisation modified +
FragmentDeletionModification modified +
Figure modified +
PositiveGeneExpressionRegulation modified +
_UpdateTracker modified +
FragmentModification modified +
GeneticallyModifiedResidue modified +
EntityFunctionalStatus modified +
ReferenceGroup modified +
Affiliation modified +
DatabaseIdentifier modified +
CandidateSet modified +
DefinedSet modified +
ModifiedResidue modified +
PhysicalEntity modified +
Polymerisation modified +
CrosslinkedResidue modified +
RNADrug modified +
BlackBoxEvent modified +
RegulationReference modified +
Disease modified +
Compartment modified +
SequenceOntology modified +
Publication modified +
Regulation modified +
InstanceEdit modified +
ControlledVocabulary modified +
Book modified +
TranscriptionalModification modified +
LiteratureReference modified +
IntraChainCrosslinkedResidue modified +
ReferenceRNASequence modified +
CellType modified +
URL modified +
AbstractModifiedResidue modified +
_Deleted modified +
NegativeRegulation modified +
ControlReference modified +
Complex modified +
GenomeEncodedEntity modified +
ChemicalDrug modified +
Pathway modified +
ReactionType modified +
GO_CellularComponent modified +
CatalystActivityReference modified +
FunctionalStatusType modified +
Taxon modified +
ReviewStatus modified +
FailedReaction modified +
MarkerReference modified +
InterChainCrosslinkedResidue modified +
EvidenceType modified +
DrugActionType modified +
NegativePrecedingEventReason modified +
Anatomy modified +
TranslationalModification modified +
NegativePrecedingEvent modified +
ReferenceDNASequence modified +
EntitySet modified +
Event modified +
_Release modified +
InteractionEvent modified +
Summation modified +
_Deleted replacementInstances +
Polymer authored 1
Complex authored 1
CellLineagePath authored +
CandidateSet authored 1
DefinedSet authored 1
GenomeEncodedEntity authored 1
ChemicalDrug authored 1
PhysicalEntity authored 1
Reaction authored +
Pathway authored +
Polymerisation authored +
ReactionlikeEvent authored +
CellDevelopmentStep authored +
RNADrug authored 1
BlackBoxEvent authored +
SimpleEntity authored 1
FailedReaction authored +
Depolymerisation authored +
Cell authored 1
ProteinDrug authored 1
EntitySet authored 1
Event authored +
InteractionEvent authored +
Drug authored 1
EntityWithAccessionedSequence authored 1
OtherEntity authored 1
DefinedSet edited +
GenomeEncodedEntity edited +
ChemicalDrug edited +
Polymer edited +
Complex edited +
CellLineagePath edited +
CandidateSet edited +
Polymerisation edited +
Pathway edited +
Reaction edited +
PhysicalEntity edited +
BlackBoxEvent edited +
SimpleEntity edited +
ReactionlikeEvent edited +
RNADrug edited +
CellDevelopmentStep edited +
FailedReaction edited +
Cell edited +
Depolymerisation edited +
ProteinDrug edited +
InteractionEvent edited +
EntitySet edited +
Event edited +
Drug edited +
OtherEntity edited +
EntityWithAccessionedSequence edited +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
Depolymerisation structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Polymerisation structureModified +
Reaction structureModified +
InteractionEvent structureModified +
Event structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
URL created 1
CellType created 1
AbstractModifiedResidue created 1
_Deleted created 1
NegativeRegulation created 1
ControlReference created 1
LiteratureReference created 1
ReferenceRNASequence created 1
IntraChainCrosslinkedResidue created 1
SequenceOntology created 1
Publication created 1
Regulation created 1
Book created 1
ControlledVocabulary created 1
InstanceEdit created 1
TranscriptionalModification created 1
Compartment created 1
Disease created 1
CrosslinkedResidue created 1
RNADrug created 1
BlackBoxEvent created 1
RegulationReference created 1
PhysicalEntity created 1
ModifiedResidue created 1
Polymerisation created 1
Affiliation created 1
DatabaseIdentifier created 1
CandidateSet created 1
DefinedSet created 1
Summation created 1
ReferenceDNASequence created 1
Event created 1
EntitySet created 1
_Release created 1
InteractionEvent created 1
TranslationalModification created 1
NegativePrecedingEvent created 1
FailedReaction created 1
MarkerReference created 1
EvidenceType created 1
InterChainCrosslinkedResidue created 1
NegativePrecedingEventReason created 1
DrugActionType created 1
Anatomy created 1
GO_CellularComponent created 1
ReactionType created 1
Taxon created 1
FunctionalStatusType created 1
CatalystActivityReference created 1
ReviewStatus created 1
Pathway created 1
Complex created 1
GenomeEncodedEntity created 1
ChemicalDrug created 1
EntityWithAccessionedSequence created 1
StableIdentifier created 1
OtherEntity created 1
ReferenceGeneProduct created 1
DatabaseObject created 1
Drug created 1
FragmentInsertionModification created 1
ReferenceMolecule created 1
ReferenceSequence created 1
FunctionalStatus created 1
ReferenceDatabase created 1
Cell created 1
ProteinDrug created 1
Person created 1
GO_MolecularFunction created 1
NonsenseMutation created 1
ReactionlikeEvent created 1
ReferenceTherapeutic created 1
Requirement created 1
ModifiedNucleotide created 1
Reaction created 1
Species created 1
Polymer created 1
CellLineagePath created 1
ReferenceEntity created 1
ReferenceGroup created 1
EntityFunctionalStatus created 1
_UpdateTracker created 1
FragmentModification created 1
GeneticallyModifiedResidue created 1
GroupModifiedResidue created 1
Depolymerisation created 1
PositiveGeneExpressionRegulation created 1
FragmentDeletionModification created 1
Figure created 1
PsiMod created 1
FrontPage created 1
ReplacedResidue created 1
NegativeGeneExpressionRegulation created 1
GO_BiologicalProcess created 1
FragmentReplacedModification created 1
CellDevelopmentStep created 1
PathwayDiagram created 1
StableIdentifierHistory created 1
SimpleEntity created 1
PositiveRegulation created 1
_DeletedInstance created 1
DeletedControlledVocabulary created 1
ReferenceIsoform created 1
ExternalOntology created 1
CatalystActivity created 1
StableIdentifierReleaseStatus created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.