Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'Complex'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
cellType + INSTANCE CellType PhysicalEntity ALL INTEGER(10) UNSIGNED
compartment + INSTANCE Compartment Complex   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
disease + INSTANCE Disease PhysicalEntity   INTEGER(10) UNSIGNED
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
entityOnOtherCell + INSTANCE PhysicalEntity Complex   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
hasComponent + INSTANCE PhysicalEntity Complex ALL INTEGER(10) UNSIGNED
includedLocation + INSTANCE Compartment Complex   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
isChimeric 1 OTHER N/A Complex   ENUM('TRUE','FALSE')
literatureReference + INSTANCE Publication PhysicalEntity   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity   TEXT
relatedSpecies + INSTANCE Species Complex   INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
species + INSTANCE Species Complex   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
stoichiometryKnown 1 OTHER N/A Complex   ENUM('TRUE','FALSE')
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED
systematicName 1 TEXT N/A PhysicalEntity   TEXT

Referers of class 'Complex' instances

Class name Attribute name Cardinality
_UpdateTracker updatedInstance +
Cell proteinMarker +
ProteinDrug inferredFrom +
EntityWithAccessionedSequence inferredFrom +
SimpleEntity inferredFrom +
ChemicalDrug inferredFrom +
EntitySet inferredFrom +
Drug inferredFrom +
Complex inferredFrom +
GenomeEncodedEntity inferredFrom +
Cell inferredFrom +
OtherEntity inferredFrom +
RNADrug inferredFrom +
PhysicalEntity inferredFrom +
DefinedSet inferredFrom +
CandidateSet inferredFrom +
Polymer inferredFrom +
ProteinDrug inferredTo +
EntityWithAccessionedSequence inferredTo +
SimpleEntity inferredTo +
ChemicalDrug inferredTo +
EntitySet inferredTo +
Drug inferredTo +
Complex inferredTo +
GenomeEncodedEntity inferredTo +
OtherEntity inferredTo +
Cell inferredTo +
PhysicalEntity inferredTo +
RNADrug inferredTo +
CandidateSet inferredTo +
DefinedSet inferredTo +
Polymer inferredTo +
Depolymerisation input +
BlackBoxEvent input +
Polymerisation input +
Reaction input +
FailedReaction input +
ReactionlikeEvent input +
NegativeGeneExpressionRegulation regulator 1
NegativeRegulation regulator 1
Requirement regulator 1
PositiveRegulation regulator 1
PositiveGeneExpressionRegulation regulator 1
Regulation regulator 1
CandidateSet hasCandidate +
DefinedSet hasMember +
CandidateSet hasMember +
EntitySet hasMember +
Complex hasComponent +
Depolymerisation entityOnOtherCell +
BlackBoxEvent entityOnOtherCell +
Complex entityOnOtherCell +
Reaction entityOnOtherCell +
CellDevelopmentStep entityOnOtherCell +
Polymerisation entityOnOtherCell +
ReactionlikeEvent entityOnOtherCell +
FailedReaction entityOnOtherCell +
EntityFunctionalStatus diseaseEntity 1
BlackBoxEvent output +
Polymerisation output +
Depolymerisation output +
Reaction output +
FailedReaction output +
ReactionlikeEvent output +
InteractionEvent partners +
EntityFunctionalStatus normalEntity 1
NegativeGeneExpressionRegulation activeUnit +
Requirement activeUnit +
NegativeRegulation activeUnit +
PositiveRegulation activeUnit +
PositiveGeneExpressionRegulation activeUnit +
Regulation activeUnit +
CatalystActivity activeUnit +
Polymer repeatedUnit +
Reaction requiredInputComponent +
FailedReaction requiredInputComponent +
ReactionlikeEvent requiredInputComponent +
BlackBoxEvent requiredInputComponent +
Polymerisation requiredInputComponent +
Depolymerisation requiredInputComponent +
CellDevelopmentStep requiredInputComponent +
_Deleted replacementInstances +
CatalystActivity physicalEntity 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.