Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'Complex'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
cellType + INSTANCE CellType PhysicalEntity ALL INTEGER(10) UNSIGNED
compartment + INSTANCE Compartment Complex   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
disease + INSTANCE Disease PhysicalEntity   INTEGER(10) UNSIGNED
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
entityOnOtherCell + INSTANCE PhysicalEntity Complex   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
hasComponent + INSTANCE PhysicalEntity Complex ALL INTEGER(10) UNSIGNED
includedLocation + INSTANCE Compartment Complex   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
isChimeric 1 OTHER N/A Complex   ENUM('TRUE','FALSE')
literatureReference + INSTANCE Publication PhysicalEntity   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity   TEXT
relatedSpecies + INSTANCE Species Complex   INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
species + INSTANCE Species Complex   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
stoichiometryKnown 1 OTHER N/A Complex   ENUM('TRUE','FALSE')
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED
systematicName 1 TEXT N/A PhysicalEntity   TEXT

Referers of class 'Complex' instances
Class name Attribute name Cardinality
EntityFunctionalStatus normalEntity 1
Polymerisation input +
ReactionlikeEvent input +
Reaction input +
BlackBoxEvent input +
Depolymerisation input +
FailedReaction input +
PhysicalEntity inferredFrom +
ChemicalDrug inferredFrom +
ProteinDrug inferredFrom +
CandidateSet inferredFrom +
RNADrug inferredFrom +
EntitySet inferredFrom +
Polymer inferredFrom +
Cell inferredFrom +
Complex inferredFrom +
DefinedSet inferredFrom +
SimpleEntity inferredFrom +
EntityWithAccessionedSequence inferredFrom +
Drug inferredFrom +
OtherEntity inferredFrom +
GenomeEncodedEntity inferredFrom +
_UpdateTracker updatedInstance +
CellDevelopmentStep requiredInputComponent +
Depolymerisation requiredInputComponent +
FailedReaction requiredInputComponent +
ReactionlikeEvent requiredInputComponent +
Polymerisation requiredInputComponent +
BlackBoxEvent requiredInputComponent +
Reaction requiredInputComponent +
DefinedSet hasMember +
CandidateSet hasMember +
EntitySet hasMember +
EntitySet inferredTo +
Polymer inferredTo +
RNADrug inferredTo +
ProteinDrug inferredTo +
CandidateSet inferredTo +
ChemicalDrug inferredTo +
PhysicalEntity inferredTo +
Cell inferredTo +
Drug inferredTo +
EntityWithAccessionedSequence inferredTo +
SimpleEntity inferredTo +
Complex inferredTo +
DefinedSet inferredTo +
GenomeEncodedEntity inferredTo +
OtherEntity inferredTo +
Reaction entityOnOtherCell +
ReactionlikeEvent entityOnOtherCell +
FailedReaction entityOnOtherCell +
Depolymerisation entityOnOtherCell +
CellDevelopmentStep entityOnOtherCell +
BlackBoxEvent entityOnOtherCell +
Complex entityOnOtherCell +
Polymerisation entityOnOtherCell +
CandidateSet hasCandidate +
Regulation regulator 1
PositiveGeneExpressionRegulation regulator 1
NegativeRegulation regulator 1
PositiveRegulation regulator 1
Requirement regulator 1
NegativeGeneExpressionRegulation regulator 1
Complex hasComponent +
Polymer repeatedUnit +
BlackBoxEvent output +
Reaction output +
Polymerisation output +
ReactionlikeEvent output +
FailedReaction output +
Depolymerisation output +
Cell proteinMarker +
EntityFunctionalStatus diseaseEntity 1
Regulation activeUnit +
CatalystActivity activeUnit +
PositiveRegulation activeUnit +
Requirement activeUnit +
NegativeGeneExpressionRegulation activeUnit +
PositiveGeneExpressionRegulation activeUnit +
NegativeRegulation activeUnit +
_Deleted replacementInstances +
InteractionEvent partners +
CatalystActivity physicalEntity 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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