Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'Polymer'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
cellType + INSTANCE CellType PhysicalEntity ALL INTEGER(10) UNSIGNED
compartment + INSTANCE Compartment Polymer   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
disease + INSTANCE Disease PhysicalEntity   INTEGER(10) UNSIGNED
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
literatureReference + INSTANCE Publication PhysicalEntity   INTEGER(10) UNSIGNED
maxUnitCount 1 INTEGER N/A Polymer   INTEGER(10)
minUnitCount 1 INTEGER N/A Polymer   INTEGER(10)
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity   TEXT
repeatedUnit + INSTANCE PhysicalEntity Polymer ALL INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
species + INSTANCE Species Polymer   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED
systematicName 1 TEXT N/A PhysicalEntity   TEXT

Referers of class 'Polymer' instances
Class name Attribute name Cardinality
Complex hasComponent +
GroupModifiedResidue modification 1
ModifiedNucleotide modification 1
IntraChainCrosslinkedResidue modification 1
CrosslinkedResidue modification 1
InterChainCrosslinkedResidue modification 1
Polymerisation output +
Reaction output +
BlackBoxEvent output +
ReactionlikeEvent output +
FailedReaction output +
Depolymerisation output +
ReactionlikeEvent requiredInputComponent +
FailedReaction requiredInputComponent +
Depolymerisation requiredInputComponent +
CellDevelopmentStep requiredInputComponent +
Reaction requiredInputComponent +
Polymerisation requiredInputComponent +
BlackBoxEvent requiredInputComponent +
Complex inferredTo +
RNADrug inferredTo +
SimpleEntity inferredTo +
GenomeEncodedEntity inferredTo +
PhysicalEntity inferredTo +
CandidateSet inferredTo +
ChemicalDrug inferredTo +
Drug inferredTo +
ProteinDrug inferredTo +
Polymer inferredTo +
EntitySet inferredTo +
DefinedSet inferredTo +
Cell inferredTo +
OtherEntity inferredTo +
EntityWithAccessionedSequence inferredTo +
PhysicalEntityCellType physicalEntity 1
CatalystActivity physicalEntity 1
NegativeGeneExpressionRegulation regulator 1
NegativeRegulation regulator 1
Requirement regulator 1
Regulation regulator 1
PositiveRegulation regulator 1
PositiveGeneExpressionRegulation regulator 1
EntitySet hasMember +
DefinedSet hasMember +
CandidateSet hasMember +
Depolymerisation input +
FailedReaction input +
ReactionlikeEvent input +
BlackBoxEvent input +
Polymerisation input +
Reaction input +
FailedReaction entityOnOtherCell +
Complex entityOnOtherCell +
Reaction entityOnOtherCell +
ReactionlikeEvent entityOnOtherCell +
Depolymerisation entityOnOtherCell +
CellDevelopmentStep entityOnOtherCell +
Polymerisation entityOnOtherCell +
BlackBoxEvent entityOnOtherCell +
EntityFunctionalStatus diseaseEntity 1
ChemicalDrug inferredFrom +
CandidateSet inferredFrom +
PhysicalEntity inferredFrom +
SimpleEntity inferredFrom +
GenomeEncodedEntity inferredFrom +
EntitySet inferredFrom +
Polymer inferredFrom +
ProteinDrug inferredFrom +
DefinedSet inferredFrom +
OtherEntity inferredFrom +
Cell inferredFrom +
EntityWithAccessionedSequence inferredFrom +
Drug inferredFrom +
Complex inferredFrom +
RNADrug inferredFrom +
_Deleted replacementInstances +
Polymer repeatedUnit +
_UpdateTracker updatedInstance 1
EntityFunctionalStatus normalEntity 1
InteractionEvent partners +
CandidateSet hasCandidate +
CatalystActivity activeUnit +
PositiveGeneExpressionRegulation activeUnit +
PositiveRegulation activeUnit +
Regulation activeUnit +
Requirement activeUnit +
NegativeRegulation activeUnit +
NegativeGeneExpressionRegulation activeUnit +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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