Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'Polymer'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
cellType + INSTANCE CellType PhysicalEntity ALL INTEGER(10) UNSIGNED
compartment + INSTANCE Compartment Polymer   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
disease + INSTANCE Disease PhysicalEntity   INTEGER(10) UNSIGNED
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
literatureReference + INSTANCE Publication PhysicalEntity   INTEGER(10) UNSIGNED
maxUnitCount 1 INTEGER N/A Polymer   INTEGER(10)
minUnitCount 1 INTEGER N/A Polymer   INTEGER(10)
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity   TEXT
repeatedUnit + INSTANCE PhysicalEntity Polymer ALL INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
species + INSTANCE Species Polymer   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED
systematicName 1 TEXT N/A PhysicalEntity   TEXT

Referers of class 'Polymer' instances
Class name Attribute name Cardinality
InteractionEvent partners +
NegativeRegulation regulator 1
Regulation regulator 1
PositiveRegulation regulator 1
Requirement regulator 1
PositiveGeneExpressionRegulation regulator 1
NegativeGeneExpressionRegulation regulator 1
OtherEntity inferredTo +
ChemicalDrug inferredTo +
Complex inferredTo +
GenomeEncodedEntity inferredTo +
EntityWithAccessionedSequence inferredTo +
DefinedSet inferredTo +
EntitySet inferredTo +
Cell inferredTo +
SimpleEntity inferredTo +
Polymer inferredTo +
PhysicalEntity inferredTo +
ProteinDrug inferredTo +
Drug inferredTo +
RNADrug inferredTo +
CandidateSet inferredTo +
FailedReaction input +
ReactionlikeEvent input +
Polymerisation input +
Depolymerisation input +
Reaction input +
BlackBoxEvent input +
EntityFunctionalStatus diseaseEntity 1
ReactionlikeEvent entityOnOtherCell +
FailedReaction entityOnOtherCell +
Complex entityOnOtherCell +
Depolymerisation entityOnOtherCell +
Reaction entityOnOtherCell +
CellDevelopmentStep entityOnOtherCell +
BlackBoxEvent entityOnOtherCell +
Polymerisation entityOnOtherCell +
EntityFunctionalStatus normalEntity 1
Complex hasComponent +
_Deleted replacementInstances +
GenomeEncodedEntity inferredFrom +
ChemicalDrug inferredFrom +
EntityWithAccessionedSequence inferredFrom +
Complex inferredFrom +
OtherEntity inferredFrom +
DefinedSet inferredFrom +
EntitySet inferredFrom +
Cell inferredFrom +
PhysicalEntity inferredFrom +
SimpleEntity inferredFrom +
Polymer inferredFrom +
Drug inferredFrom +
ProteinDrug inferredFrom +
RNADrug inferredFrom +
CandidateSet inferredFrom +
EntitySet hasMember +
CandidateSet hasMember +
DefinedSet hasMember +
CatalystActivity physicalEntity 1
_UpdateTracker updatedInstance 1
CandidateSet hasCandidate +
Polymer repeatedUnit +
Depolymerisation output +
Reaction output +
BlackBoxEvent output +
ReactionlikeEvent output +
FailedReaction output +
Polymerisation output +
CatalystActivity activeUnit +
NegativeGeneExpressionRegulation activeUnit +
NegativeRegulation activeUnit +
Regulation activeUnit +
Requirement activeUnit +
PositiveRegulation activeUnit +
PositiveGeneExpressionRegulation activeUnit +
ReactionlikeEvent requiredInputComponent +
FailedReaction requiredInputComponent +
Polymerisation requiredInputComponent +
Depolymerisation requiredInputComponent +
Reaction requiredInputComponent +
BlackBoxEvent requiredInputComponent +
CellDevelopmentStep requiredInputComponent +
IntraChainCrosslinkedResidue modification 1
ModifiedNucleotide modification 1
GroupModifiedResidue modification 1
CrosslinkedResidue modification 1
InterChainCrosslinkedResidue modification 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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