Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
Event authored +
CellDevelopmentStep authored +
Drug authored 1
BlackBoxEvent authored +
EntityWithAccessionedSequence authored 1
Pathway authored +
GenomeEncodedEntity authored 1
ProteinDrug authored 1
CandidateSet authored 1
Complex authored 1
Polymer authored 1
ReactionlikeEvent authored +
Polymerisation authored +
RNADrug authored 1
InteractionEvent authored +
PhysicalEntity authored 1
Reaction authored +
EntitySet authored 1
SimpleEntity authored 1
DefinedSet authored 1
FailedReaction authored +
ChemicalDrug authored 1
Cell authored 1
OtherEntity authored 1
CellLineagePath authored +
Depolymerisation authored +
CatalystActivity modified +
FrontPage modified +
FailedReaction modified +
GroupModifiedResidue modified +
FragmentInsertionModification modified +
CellLineagePath modified +
ReferenceEntity modified +
ReferenceGroup modified +
DrugActionType modified +
PhysicalEntityCellType modified +
NegativeRegulation modified +
FragmentDeletionModification modified +
TranslationalModification modified +
_Release modified +
LiteratureReference modified +
Book modified +
ModifiedResidue modified +
Pathway modified +
Disease modified +
ControlReference modified +
MarkerReference modified +
FunctionalStatusType modified +
Event modified +
GO_BiologicalProcess modified +
DatabaseObject modified +
InterChainCrosslinkedResidue modified +
Polymerisation modified +
CandidateSet modified +
ReviewStatus modified +
Complex modified +
RetractionStatus modified +
Polymer modified +
SequenceOntology modified +
InstanceEdit modified +
ExternalOntology modified +
URL modified +
Publication modified +
OtherEntity modified +
GeneticallyModifiedResidue modified +
PositiveGeneExpressionRegulation modified +
DatabaseIdentifier modified +
Anatomy modified +
GenomeEncodedEntity modified +
ModifiedNucleotide modified +
StableIdentifierReleaseStatus modified +
Affiliation modified +
NegativePrecedingEventReason modified +
FragmentModification modified +
RNADrug modified +
CellType modified +
_Deleted modified +
Reaction modified +
ReferenceMolecule modified +
_DeletedInstance modified +
EntitySet modified +
PhysicalEntity modified +
AbstractModifiedResidue modified +
ReferenceIsoform modified +
ReferenceDatabase modified +
ChemicalDrug modified +
Cell modified +
PathwayDiagram modified +
Requirement modified +
FunctionalStatus modified +
DefinedSet modified +
EntityFunctionalStatus modified +
PositiveRegulation modified +
StableIdentifierHistory modified +
SimpleEntity modified +
Species modified +
EvidenceType modified +
Taxon modified +
ProteinDrug modified +
EntityWithAccessionedSequence modified +
RegulationReference modified +
GO_CellularComponent modified +
ReferenceTherapeutic modified +
Drug modified +
BlackBoxEvent modified +
StableIdentifier modified +
InteractionEvent modified +
ControlledVocabulary modified +
NegativePrecedingEvent modified +
ReplacedResidue modified +
_UpdateTracker modified +
NegativeGeneExpressionRegulation modified +
CrosslinkedResidue modified +
ReferenceRNASequence modified +
Compartment modified +
ReactionlikeEvent modified +
TranscriptionalModification modified +
Person modified +
NonsenseMutation modified +
ReactionType modified +
Figure modified +
Summation modified +
Depolymerisation modified +
PsiMod modified +
Regulation modified +
FragmentReplacedModification modified +
ReferenceGeneProduct modified +
IntraChainCrosslinkedResidue modified +
DeletedControlledVocabulary modified +
ReferenceDNASequence modified +
CellDevelopmentStep modified +
ReferenceSequence modified +
CatalystActivityReference modified +
GO_MolecularFunction modified +
CellLineagePath structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
Reaction structureModified +
Event structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
Polymerisation edited +
Complex edited +
ReactionlikeEvent edited +
Polymer edited +
CandidateSet edited +
InteractionEvent edited +
RNADrug edited +
EntityWithAccessionedSequence edited +
Pathway edited +
BlackBoxEvent edited +
Event edited +
Drug edited +
CellDevelopmentStep edited +
ProteinDrug edited +
GenomeEncodedEntity edited +
SimpleEntity edited +
Depolymerisation edited +
CellLineagePath edited +
OtherEntity edited +
ChemicalDrug edited +
FailedReaction edited +
Cell edited +
DefinedSet edited +
PhysicalEntity edited +
EntitySet edited +
Reaction edited +
Reaction revised +
EntitySet revised +
PhysicalEntity revised +
ChemicalDrug revised +
FailedReaction revised +
Cell revised +
Depolymerisation revised +
CellLineagePath revised +
OtherEntity revised +
DefinedSet revised +
SimpleEntity revised +
ProteinDrug revised +
GenomeEncodedEntity revised +
Pathway revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
Event revised +
CellDevelopmentStep revised +
Drug revised +
InteractionEvent revised +
RNADrug revised +
Polymerisation revised +
CandidateSet revised +
Complex revised +
Polymer revised +
ReactionlikeEvent revised +
Reaction internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
EntitySet reviewed +
Reaction reviewed +
PhysicalEntity reviewed +
DefinedSet reviewed +
OtherEntity reviewed +
CellLineagePath reviewed +
Depolymerisation reviewed +
Cell reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
SimpleEntity reviewed +
GenomeEncodedEntity reviewed +
ProteinDrug reviewed +
Event reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
Drug reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
RNADrug reviewed +
InteractionEvent reviewed +
Polymer reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
SimpleEntity created 1
StableIdentifierHistory created 1
PositiveRegulation created 1
ReferenceDatabase created 1
ChemicalDrug created 1
Cell created 1
EntityFunctionalStatus created 1
Requirement created 1
DefinedSet created 1
PathwayDiagram created 1
FunctionalStatus created 1
PhysicalEntity created 1
ReferenceIsoform created 1
AbstractModifiedResidue created 1
_DeletedInstance created 1
EntitySet created 1
ReferenceMolecule created 1
Reaction created 1
Compartment created 1
ReactionlikeEvent created 1
ReplacedResidue created 1
_UpdateTracker created 1
InteractionEvent created 1
NegativePrecedingEvent created 1
ControlledVocabulary created 1
ReferenceRNASequence created 1
CrosslinkedResidue created 1
NegativeGeneExpressionRegulation created 1
ReferenceTherapeutic created 1
GO_CellularComponent created 1
EntityWithAccessionedSequence created 1
RegulationReference created 1
StableIdentifier created 1
Drug created 1
BlackBoxEvent created 1
ProteinDrug created 1
Species created 1
EvidenceType created 1
Taxon created 1
PsiMod created 1
Regulation created 1
Depolymerisation created 1
Summation created 1
Figure created 1
NonsenseMutation created 1
ReactionType created 1
Person created 1
TranscriptionalModification created 1
GO_MolecularFunction created 1
CatalystActivityReference created 1
ReferenceDNASequence created 1
DeletedControlledVocabulary created 1
ReferenceSequence created 1
CellDevelopmentStep created 1
ReferenceGeneProduct created 1
FragmentReplacedModification created 1
IntraChainCrosslinkedResidue created 1
FragmentDeletionModification created 1
TranslationalModification created 1
CellLineagePath created 1
ReferenceGroup created 1
ReferenceEntity created 1
GroupModifiedResidue created 1
FragmentInsertionModification created 1
FailedReaction created 1
NegativeRegulation created 1
PhysicalEntityCellType created 1
DrugActionType created 1
FrontPage created 1
CatalystActivity created 1
Polymerisation created 1
Complex created 1
RetractionStatus created 1
Polymer created 1
ReviewStatus created 1
CandidateSet created 1
InterChainCrosslinkedResidue created 1
DatabaseObject created 1
MarkerReference created 1
ControlReference created 1
Pathway created 1
Disease created 1
GO_BiologicalProcess created 1
Event created 1
FunctionalStatusType created 1
_Release created 1
LiteratureReference created 1
ModifiedResidue created 1
Book created 1
GeneticallyModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
Anatomy created 1
DatabaseIdentifier created 1
OtherEntity created 1
Publication created 1
InstanceEdit created 1
URL created 1
ExternalOntology created 1
SequenceOntology created 1
CellType created 1
_Deleted created 1
FragmentModification created 1
NegativePrecedingEventReason created 1
RNADrug created 1
StableIdentifierReleaseStatus created 1
Affiliation created 1
GenomeEncodedEntity created 1
ModifiedNucleotide created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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