Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Pathway internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Pathway structureModified +
FailedReaction structureModified +
Reaction structureModified +
Event structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Polymerisation authored +
CellDevelopmentStep authored +
ChemicalDrug authored 1
ProteinDrug authored 1
BlackBoxEvent authored +
CellLineagePath authored +
EntityWithAccessionedSequence authored 1
Pathway authored +
CandidateSet authored 1
PhysicalEntity authored 1
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
OtherEntity authored 1
Depolymerisation authored +
DefinedSet authored 1
EntitySet authored 1
Drug authored 1
InteractionEvent authored +
SimpleEntity authored 1
RNADrug authored 1
Cell authored 1
Event authored +
Complex authored 1
Reaction authored +
FailedReaction authored +
Polymer authored 1
_Deleted replacementInstances +
OtherEntity modified +
GO_CellularComponent modified +
DatabaseObject modified +
FragmentReplacedModification modified +
EntitySet modified +
GO_MolecularFunction modified +
NegativeGeneExpressionRegulation modified +
Affiliation modified +
Cell modified +
ReferenceMolecule modified +
Complex modified +
ControlReference modified +
FunctionalStatus modified +
ReferenceTherapeutic modified +
CatalystActivityReference modified +
Taxon modified +
SequenceOntology modified +
FunctionalStatusType modified +
NegativePrecedingEvent modified +
CellLineagePath modified +
NonsenseMutation modified +
PositiveRegulation modified +
GroupModifiedResidue modified +
GenomeEncodedEntity modified +
ReplacedResidue modified +
NegativePrecedingEventReason modified +
Regulation modified +
ReactionlikeEvent modified +
InterChainCrosslinkedResidue modified +
ExternalOntology modified +
DrugActionType modified +
ReferenceSequence modified +
ReactionType modified +
ReferenceDNASequence modified +
URL modified +
EntityFunctionalStatus modified +
Species modified +
GeneticallyModifiedResidue modified +
Polymer modified +
ModifiedResidue modified +
FailedReaction modified +
CellDevelopmentStep modified +
Compartment modified +
Polymerisation modified +
RetractionStatus modified +
ControlledVocabulary modified +
CellType modified +
InstanceEdit modified +
_Release modified +
ReferenceGeneProduct modified +
EntityWithAccessionedSequence modified +
BlackBoxEvent modified +
FragmentDeletionModification modified +
CatalystActivity modified +
CandidateSet modified +
StableIdentifierHistory modified +
ReferenceDatabase modified +
Anatomy modified +
ReferenceIsoform modified +
_DeletedInstance modified +
StableIdentifier modified +
PhysicalEntityCellType modified +
FragmentModification modified +
Depolymerisation modified +
ReviewStatus modified +
Drug modified +
RNADrug modified +
Figure modified +
Event modified +
EvidenceType modified +
Person modified +
FragmentInsertionModification modified +
Disease modified +
ProteinDrug modified +
_UpdateTracker modified +
PsiMod modified +
PhysicalEntity modified +
ModifiedNucleotide modified +
NegativeRegulation modified +
ReferenceGroup modified +
ReferenceEntity modified +
FrontPage modified +
Requirement modified +
Publication modified +
DefinedSet modified +
PathwayDiagram modified +
InteractionEvent modified +
SimpleEntity modified +
GO_BiologicalProcess modified +
MarkerReference modified +
TranscriptionalModification modified +
TranslationalModification modified +
StableIdentifierReleaseStatus modified +
Book modified +
Reaction modified +
_Deleted modified +
LiteratureReference modified +
AbstractModifiedResidue modified +
IntraChainCrosslinkedResidue modified +
ChemicalDrug modified +
Summation modified +
RegulationReference modified +
DatabaseIdentifier modified +
DeletedControlledVocabulary modified +
CrosslinkedResidue modified +
Pathway modified +
ReferenceRNASequence modified +
PositiveGeneExpressionRegulation modified +
ReactionType created 1
ReferenceDNASequence created 1
ExternalOntology created 1
ReferenceSequence created 1
DrugActionType created 1
GeneticallyModifiedResidue created 1
Polymer created 1
ModifiedResidue created 1
FailedReaction created 1
EntityFunctionalStatus created 1
URL created 1
Species created 1
NegativePrecedingEventReason created 1
Regulation created 1
ReactionlikeEvent created 1
InterChainCrosslinkedResidue created 1
CandidateSet created 1
ReferenceDatabase created 1
StableIdentifierHistory created 1
CatalystActivity created 1
Anatomy created 1
ReferenceIsoform created 1
_DeletedInstance created 1
StableIdentifier created 1
CellType created 1
InstanceEdit created 1
Polymerisation created 1
CellDevelopmentStep created 1
Compartment created 1
ControlledVocabulary created 1
RetractionStatus created 1
EntityWithAccessionedSequence created 1
FragmentDeletionModification created 1
BlackBoxEvent created 1
_Release created 1
ReferenceGeneProduct created 1
Cell created 1
ReferenceMolecule created 1
NegativeGeneExpressionRegulation created 1
Affiliation created 1
ControlReference created 1
FunctionalStatus created 1
Complex created 1
OtherEntity created 1
GO_CellularComponent created 1
GO_MolecularFunction created 1
FragmentReplacedModification created 1
DatabaseObject created 1
EntitySet created 1
PositiveRegulation created 1
ReplacedResidue created 1
GroupModifiedResidue created 1
GenomeEncodedEntity created 1
CatalystActivityReference created 1
ReferenceTherapeutic created 1
NegativePrecedingEvent created 1
CellLineagePath created 1
NonsenseMutation created 1
Taxon created 1
FunctionalStatusType created 1
SequenceOntology created 1
MarkerReference created 1
TranslationalModification created 1
TranscriptionalModification created 1
StableIdentifierReleaseStatus created 1
GO_BiologicalProcess created 1
LiteratureReference created 1
Book created 1
Reaction created 1
_Deleted created 1
DefinedSet created 1
Publication created 1
Requirement created 1
SimpleEntity created 1
InteractionEvent created 1
PathwayDiagram created 1
CrosslinkedResidue created 1
Pathway created 1
DatabaseIdentifier created 1
DeletedControlledVocabulary created 1
PositiveGeneExpressionRegulation created 1
ReferenceRNASequence created 1
IntraChainCrosslinkedResidue created 1
AbstractModifiedResidue created 1
RegulationReference created 1
Summation created 1
ChemicalDrug created 1
RNADrug created 1
Figure created 1
EvidenceType created 1
Event created 1
Depolymerisation created 1
ReviewStatus created 1
PhysicalEntityCellType created 1
FragmentModification created 1
Drug created 1
PhysicalEntity created 1
ModifiedNucleotide created 1
NegativeRegulation created 1
ReferenceGroup created 1
PsiMod created 1
FrontPage created 1
ReferenceEntity created 1
Person created 1
FragmentInsertionModification created 1
_UpdateTracker created 1
ProteinDrug created 1
Disease created 1
Pathway edited +
PhysicalEntity edited +
CandidateSet edited +
GenomeEncodedEntity edited +
Polymerisation edited +
CellDevelopmentStep edited +
ChemicalDrug edited +
BlackBoxEvent edited +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
RNADrug edited +
Cell edited +
Complex edited +
Reaction edited +
Event edited +
FailedReaction edited +
Polymer edited +
ReactionlikeEvent edited +
OtherEntity edited +
Depolymerisation edited +
DefinedSet edited +
EntitySet edited +
InteractionEvent edited +
Drug edited +
SimpleEntity edited +
Polymerisation revised +
CellDevelopmentStep revised +
ProteinDrug revised +
BlackBoxEvent revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
ChemicalDrug revised +
Pathway revised +
PhysicalEntity revised +
CandidateSet revised +
GenomeEncodedEntity revised +
Depolymerisation revised +
DefinedSet revised +
OtherEntity revised +
ReactionlikeEvent revised +
SimpleEntity revised +
EntitySet revised +
Drug revised +
InteractionEvent revised +
RNADrug revised +
Cell revised +
FailedReaction revised +
Polymer revised +
Event revised +
Reaction revised +
Complex revised +
Event reviewed +
Complex reviewed +
Reaction reviewed +
FailedReaction reviewed +
Polymer reviewed +
RNADrug reviewed +
Cell reviewed +
EntitySet reviewed +
Drug reviewed +
InteractionEvent reviewed +
SimpleEntity reviewed +
ReactionlikeEvent reviewed +
OtherEntity reviewed +
Depolymerisation reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
Pathway reviewed +
PhysicalEntity reviewed +
CandidateSet reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
ProteinDrug reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
Polymerisation reviewed +
CellDevelopmentStep reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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