Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Pathway structureModified +
Polymerisation structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
InteractionEvent internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent edited +
GenomeEncodedEntity edited +
FailedReaction edited +
EntityWithAccessionedSequence edited +
Pathway edited +
EntitySet edited +
Event edited +
Complex edited +
SimpleEntity edited +
ChemicalDrug edited +
ProteinDrug edited +
Depolymerisation edited +
Drug edited +
CandidateSet edited +
Polymer edited +
RNADrug edited +
BlackBoxEvent edited +
DefinedSet edited +
CellDevelopmentStep edited +
Polymerisation edited +
Reaction edited +
PhysicalEntity edited +
CellLineagePath edited +
OtherEntity edited +
InteractionEvent edited +
Cell edited +
Cell modified +
ReviewStatus modified +
RegulationReference modified +
Regulation modified +
InteractionEvent modified +
DrugActionType modified +
OtherEntity modified +
PhysicalEntityCellType modified +
InstanceEdit modified +
GO_MolecularFunction modified +
CellDevelopmentStep modified +
FragmentReplacedModification modified +
Figure modified +
CandidateSet modified +
EntityFunctionalStatus modified +
CrosslinkedResidue modified +
SimpleEntity modified +
_Release modified +
Book modified +
ControlReference modified +
Complex modified +
EvidenceType modified +
ReferenceEntity modified +
EntitySet modified +
Pathway modified +
TranslationalModification modified +
ReactionType modified +
ExternalOntology modified +
NegativeGeneExpressionRegulation modified +
PhysicalEntity modified +
ControlledVocabulary modified +
CellLineagePath modified +
ReferenceTherapeutic modified +
RNADrug modified +
ReferenceMolecule modified +
URL modified +
FragmentInsertionModification modified +
Depolymerisation modified +
StableIdentifier modified +
ChemicalDrug modified +
ProteinDrug modified +
Taxon modified +
ReferenceGeneProduct modified +
PathwayDiagram modified +
MarkerReference modified +
Requirement modified +
_Deleted modified +
GeneticallyModifiedResidue modified +
FailedReaction modified +
Publication modified +
RetractionStatus modified +
ReactionlikeEvent modified +
CatalystActivityReference modified +
IntraChainCrosslinkedResidue modified +
FragmentModification modified +
ReferenceRNASequence modified +
GroupModifiedResidue modified +
ReferenceDatabase modified +
Summation modified +
PositiveGeneExpressionRegulation modified +
Reaction modified +
DatabaseObject modified +
NegativePrecedingEvent modified +
TranscriptionalModification modified +
Polymerisation modified +
BlackBoxEvent modified +
Polymer modified +
ReferenceDNASequence modified +
Anatomy modified +
Species modified +
CatalystActivity modified +
Affiliation modified +
PsiMod modified +
GO_CellularComponent modified +
NegativeRegulation modified +
ReferenceGroup modified +
FunctionalStatusType modified +
EntityWithAccessionedSequence modified +
Disease modified +
InterChainCrosslinkedResidue modified +
ReferenceIsoform modified +
DatabaseIdentifier modified +
ModifiedNucleotide modified +
AbstractModifiedResidue modified +
_DeletedInstance modified +
SequenceOntology modified +
DefinedSet modified +
NegativePrecedingEventReason modified +
_UpdateTracker modified +
LiteratureReference modified +
ReplacedResidue modified +
CellType modified +
StableIdentifierHistory modified +
Drug modified +
ReferenceSequence modified +
DeletedControlledVocabulary modified +
GO_BiologicalProcess modified +
FunctionalStatus modified +
PositiveRegulation modified +
Person modified +
NonsenseMutation modified +
FrontPage modified +
StableIdentifierReleaseStatus modified +
Event modified +
Compartment modified +
ModifiedResidue modified +
FragmentDeletionModification modified +
GenomeEncodedEntity modified +
ChemicalDrug revised +
ProteinDrug revised +
SimpleEntity revised +
Complex revised +
Event revised +
EntitySet revised +
Pathway revised +
EntityWithAccessionedSequence revised +
FailedReaction revised +
ReactionlikeEvent revised +
GenomeEncodedEntity revised +
Cell revised +
InteractionEvent revised +
PhysicalEntity revised +
CellLineagePath revised +
OtherEntity revised +
Reaction revised +
CellDevelopmentStep revised +
DefinedSet revised +
Polymerisation revised +
RNADrug revised +
BlackBoxEvent revised +
Polymer revised +
CandidateSet revised +
Depolymerisation revised +
Drug revised +
_Deleted replacementInstances +
Figure created 1
FragmentReplacedModification created 1
CellDevelopmentStep created 1
EntityFunctionalStatus created 1
CandidateSet created 1
InteractionEvent created 1
Regulation created 1
RegulationReference created 1
ReviewStatus created 1
Cell created 1
GO_MolecularFunction created 1
InstanceEdit created 1
PhysicalEntityCellType created 1
OtherEntity created 1
DrugActionType created 1
ReactionType created 1
EntitySet created 1
Pathway created 1
TranslationalModification created 1
ReferenceEntity created 1
NegativeGeneExpressionRegulation created 1
ExternalOntology created 1
_Release created 1
ControlReference created 1
Book created 1
SimpleEntity created 1
CrosslinkedResidue created 1
Complex created 1
EvidenceType created 1
ReferenceMolecule created 1
URL created 1
RNADrug created 1
StableIdentifier created 1
FragmentInsertionModification created 1
Depolymerisation created 1
ReferenceTherapeutic created 1
CellLineagePath created 1
ControlledVocabulary created 1
PhysicalEntity created 1
_Deleted created 1
Requirement created 1
CatalystActivityReference created 1
ReactionlikeEvent created 1
Publication created 1
RetractionStatus created 1
FailedReaction created 1
GeneticallyModifiedResidue created 1
ReferenceGeneProduct created 1
ProteinDrug created 1
Taxon created 1
ChemicalDrug created 1
PathwayDiagram created 1
MarkerReference created 1
BlackBoxEvent created 1
Polymerisation created 1
TranscriptionalModification created 1
DatabaseObject created 1
NegativePrecedingEvent created 1
Anatomy created 1
ReferenceDNASequence created 1
Polymer created 1
ReferenceDatabase created 1
FragmentModification created 1
ReferenceRNASequence created 1
GroupModifiedResidue created 1
IntraChainCrosslinkedResidue created 1
Reaction created 1
PositiveGeneExpressionRegulation created 1
Summation created 1
FunctionalStatusType created 1
ReferenceGroup created 1
GO_CellularComponent created 1
NegativeRegulation created 1
InterChainCrosslinkedResidue created 1
EntityWithAccessionedSequence created 1
Disease created 1
CatalystActivity created 1
Species created 1
PsiMod created 1
Affiliation created 1
CellType created 1
ReplacedResidue created 1
LiteratureReference created 1
_UpdateTracker created 1
NegativePrecedingEventReason created 1
SequenceOntology created 1
_DeletedInstance created 1
DefinedSet created 1
Drug created 1
ReferenceSequence created 1
StableIdentifierHistory created 1
DatabaseIdentifier created 1
ReferenceIsoform created 1
AbstractModifiedResidue created 1
ModifiedNucleotide created 1
Compartment created 1
Event created 1
GenomeEncodedEntity created 1
FragmentDeletionModification created 1
ModifiedResidue created 1
DeletedControlledVocabulary created 1
FrontPage created 1
StableIdentifierReleaseStatus created 1
NonsenseMutation created 1
Person created 1
GO_BiologicalProcess created 1
PositiveRegulation created 1
FunctionalStatus created 1
Complex authored 1
SimpleEntity authored 1
ProteinDrug authored 1
ChemicalDrug authored 1
ReactionlikeEvent authored +
GenomeEncodedEntity authored 1
EntityWithAccessionedSequence authored 1
FailedReaction authored +
Pathway authored +
EntitySet authored 1
Event authored +
Reaction authored +
OtherEntity authored 1
CellLineagePath authored +
PhysicalEntity authored 1
InteractionEvent authored +
Cell authored 1
Drug authored 1
Depolymerisation authored +
Polymer authored 1
CandidateSet authored 1
BlackBoxEvent authored +
RNADrug authored 1
Polymerisation authored +
DefinedSet authored 1
CellDevelopmentStep authored +
Complex reviewed +
SimpleEntity reviewed +
ChemicalDrug reviewed +
ProteinDrug reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
EntityWithAccessionedSequence reviewed +
FailedReaction reviewed +
Pathway reviewed +
EntitySet reviewed +
Event reviewed +
Reaction reviewed +
PhysicalEntity reviewed +
OtherEntity reviewed +
CellLineagePath reviewed +
InteractionEvent reviewed +
Cell reviewed +
Depolymerisation reviewed +
Drug reviewed +
CandidateSet reviewed +
Polymer reviewed +
RNADrug reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
DefinedSet reviewed +
Polymerisation reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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