Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
EntityWithAccessionedSequence authored 1
RNADrug authored 1
Event authored +
SimpleEntity authored 1
EntitySet authored 1
Cell authored 1
PhysicalEntity authored 1
Depolymerisation authored +
Polymer authored 1
CellLineagePath authored +
GenomeEncodedEntity authored 1
Polymerisation authored +
CandidateSet authored 1
Reaction authored +
FailedReaction authored +
ChemicalDrug authored 1
OtherEntity authored 1
InteractionEvent authored +
BlackBoxEvent authored +
DefinedSet authored 1
ProteinDrug authored 1
Complex authored 1
ReactionlikeEvent authored +
CellDevelopmentStep authored +
Drug authored 1
Pathway authored +
ProteinDrug revised +
Pathway revised +
Drug revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
Complex revised +
Polymerisation revised +
GenomeEncodedEntity revised +
CellLineagePath revised +
InteractionEvent revised +
BlackBoxEvent revised +
DefinedSet revised +
OtherEntity revised +
ChemicalDrug revised +
FailedReaction revised +
Reaction revised +
CandidateSet revised +
Cell revised +
EntitySet revised +
SimpleEntity revised +
Polymer revised +
Depolymerisation revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
RNADrug revised +
Event revised +
RNADrug edited +
EntityWithAccessionedSequence edited +
Event edited +
Cell edited +
SimpleEntity edited +
EntitySet edited +
Polymer edited +
Depolymerisation edited +
PhysicalEntity edited +
Polymerisation edited +
CellLineagePath edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
BlackBoxEvent edited +
DefinedSet edited +
ChemicalDrug edited +
OtherEntity edited +
FailedReaction edited +
Reaction edited +
CandidateSet edited +
ProteinDrug edited +
Pathway edited +
CellDevelopmentStep edited +
Drug edited +
ReactionlikeEvent edited +
Complex edited +
Anatomy modified +
LiteratureReference modified +
CandidateSet modified +
StableIdentifierReleaseStatus modified +
_Release modified +
FragmentModification modified +
OtherEntity modified +
ReplacedResidue modified +
ReactionType modified +
Taxon modified +
RegulationReference modified +
PhysicalEntityCellType modified +
ReferenceMolecule modified +
_UpdateTracker modified +
ReferenceGeneProduct modified +
NegativePrecedingEventReason modified +
PositiveRegulation modified +
ReferenceSequence modified +
ControlledVocabulary modified +
MarkerReference modified +
TranslationalModification modified +
EntitySet modified +
Compartment modified +
PhysicalEntity modified +
Polymer modified +
NegativeRegulation modified +
GenomeEncodedEntity modified +
CellLineagePath modified +
URL modified +
EntityFunctionalStatus modified +
SequenceOntology modified +
DrugActionType modified +
Reaction modified +
DeletedControlledVocabulary modified +
DefinedSet modified +
FrontPage modified +
RetractionStatus modified +
FunctionalStatusType modified +
ReferenceGroup modified +
Drug modified +
GroupModifiedResidue modified +
Pathway modified +
PositiveGeneExpressionRegulation modified +
RNADrug modified +
Requirement modified +
Event modified +
CatalystActivity modified +
FragmentInsertionModification modified +
InstanceEdit modified +
DatabaseIdentifier modified +
FunctionalStatus modified +
Affiliation modified +
Depolymerisation modified +
StableIdentifier modified +
Figure modified +
ReferenceTherapeutic modified +
Polymerisation modified +
Book modified +
StableIdentifierHistory modified +
ReferenceRNASequence modified +
Summation modified +
ChemicalDrug modified +
BlackBoxEvent modified +
ProteinDrug modified +
Species modified +
ReferenceDatabase modified +
ModifiedResidue modified +
ReferenceDNASequence modified +
Disease modified +
EvidenceType modified +
DatabaseObject modified +
CatalystActivityReference modified +
Regulation modified +
TranscriptionalModification modified +
FragmentReplacedModification modified +
ReferenceIsoform modified +
_DeletedInstance modified +
GO_BiologicalProcess modified +
NegativePrecedingEvent modified +
ControlReference modified +
_Deleted modified +
PathwayDiagram modified +
Person modified +
CellType modified +
FailedReaction modified +
InteractionEvent modified +
GO_CellularComponent modified +
GO_MolecularFunction modified +
ReferenceEntity modified +
ExternalOntology modified +
Complex modified +
ReactionlikeEvent modified +
Publication modified +
InterChainCrosslinkedResidue modified +
GeneticallyModifiedResidue modified +
ModifiedNucleotide modified +
CellDevelopmentStep modified +
FragmentDeletionModification modified +
EntityWithAccessionedSequence modified +
IntraChainCrosslinkedResidue modified +
ReviewStatus modified +
AbstractModifiedResidue modified +
SimpleEntity modified +
PsiMod modified +
Cell modified +
NegativeGeneExpressionRegulation modified +
NonsenseMutation modified +
CrosslinkedResidue modified +
ReviewStatus created 1
IntraChainCrosslinkedResidue created 1
EntityWithAccessionedSequence created 1
AbstractModifiedResidue created 1
PsiMod created 1
Cell created 1
SimpleEntity created 1
NegativeGeneExpressionRegulation created 1
NonsenseMutation created 1
CrosslinkedResidue created 1
PathwayDiagram created 1
ControlReference created 1
_Deleted created 1
FailedReaction created 1
CellType created 1
GO_CellularComponent created 1
InteractionEvent created 1
Person created 1
GO_MolecularFunction created 1
GeneticallyModifiedResidue created 1
ModifiedNucleotide created 1
CellDevelopmentStep created 1
FragmentDeletionModification created 1
ExternalOntology created 1
Complex created 1
ReferenceEntity created 1
Publication created 1
InterChainCrosslinkedResidue created 1
ReactionlikeEvent created 1
EvidenceType created 1
DatabaseObject created 1
CatalystActivityReference created 1
Regulation created 1
_DeletedInstance created 1
ReferenceIsoform created 1
GO_BiologicalProcess created 1
NegativePrecedingEvent created 1
TranscriptionalModification created 1
FragmentReplacedModification created 1
ReferenceTherapeutic created 1
Polymerisation created 1
Book created 1
StableIdentifierHistory created 1
ChemicalDrug created 1
Summation created 1
BlackBoxEvent created 1
ReferenceRNASequence created 1
Species created 1
ProteinDrug created 1
Disease created 1
ReferenceDatabase created 1
ModifiedResidue created 1
ReferenceDNASequence created 1
RNADrug created 1
Requirement created 1
CatalystActivity created 1
Event created 1
DatabaseIdentifier created 1
FunctionalStatus created 1
FragmentInsertionModification created 1
InstanceEdit created 1
Depolymerisation created 1
Affiliation created 1
StableIdentifier created 1
Figure created 1
URL created 1
EntityFunctionalStatus created 1
GenomeEncodedEntity created 1
CellLineagePath created 1
DeletedControlledVocabulary created 1
DefinedSet created 1
SequenceOntology created 1
DrugActionType created 1
Reaction created 1
FrontPage created 1
GroupModifiedResidue created 1
ReferenceGroup created 1
Drug created 1
Pathway created 1
PositiveGeneExpressionRegulation created 1
RetractionStatus created 1
FunctionalStatusType created 1
ReferenceGeneProduct created 1
PhysicalEntityCellType created 1
ReferenceMolecule created 1
_UpdateTracker created 1
PositiveRegulation created 1
ControlledVocabulary created 1
ReferenceSequence created 1
NegativePrecedingEventReason created 1
Compartment created 1
MarkerReference created 1
TranslationalModification created 1
EntitySet created 1
Polymer created 1
NegativeRegulation created 1
PhysicalEntity created 1
Anatomy created 1
LiteratureReference created 1
OtherEntity created 1
CandidateSet created 1
StableIdentifierReleaseStatus created 1
FragmentModification created 1
_Release created 1
Taxon created 1
ReactionType created 1
ReplacedResidue created 1
RegulationReference created 1
CellLineagePath structureModified +
Polymerisation structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Event structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
_Deleted replacementInstances +
Event reviewed +
RNADrug reviewed +
EntityWithAccessionedSequence reviewed +
Depolymerisation reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
EntitySet reviewed +
SimpleEntity reviewed +
Cell reviewed +
Reaction reviewed +
CandidateSet reviewed +
BlackBoxEvent reviewed +
DefinedSet reviewed +
InteractionEvent reviewed +
OtherEntity reviewed +
ChemicalDrug reviewed +
FailedReaction reviewed +
GenomeEncodedEntity reviewed +
CellLineagePath reviewed +
Polymerisation reviewed +
ReactionlikeEvent reviewed +
Complex reviewed +
Pathway reviewed +
Drug reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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