Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Depolymerisation structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Reaction structureModified +
CellLineagePath structureModified +
Event structureModified +
Polymerisation structureModified +
_DeletedInstance created 1
ReferenceGroup created 1
Compartment created 1
NegativeGeneExpressionRegulation created 1
PathwayDiagram created 1
ReferenceSequence created 1
ReferenceGeneProduct created 1
DatabaseIdentifier created 1
ReferenceRNASequence created 1
ControlReference created 1
ReactionlikeEvent created 1
NegativePrecedingEvent created 1
ExternalOntology created 1
ReferenceDatabase created 1
Book created 1
AbstractModifiedResidue created 1
ModifiedResidue created 1
EntityWithAccessionedSequence created 1
URL created 1
FragmentModification created 1
Disease created 1
Cell created 1
DatabaseObject created 1
CandidateSet created 1
NegativeRegulation created 1
CellDevelopmentStep created 1
_Release created 1
Pathway created 1
MarkerReference created 1
CrosslinkedResidue created 1
ReferenceEntity created 1
DeletedControlledVocabulary created 1
Regulation created 1
ReferenceTherapeutic created 1
Person created 1
PhysicalEntity created 1
GeneticallyModifiedResidue created 1
RNADrug created 1
TranslationalModification created 1
CatalystActivityReference created 1
OtherEntity created 1
DefinedSet created 1
_UpdateTracker created 1
GO_BiologicalProcess created 1
Figure created 1
TranscriptionalModification created 1
Taxon created 1
GenomeEncodedEntity created 1
GO_MolecularFunction created 1
_Deleted created 1
FrontPage created 1
NegativePrecedingEventReason created 1
RetractionStatus created 1
ReplacedResidue created 1
PositiveGeneExpressionRegulation created 1
LiteratureReference created 1
BlackBoxEvent created 1
Affiliation created 1
ReactionType created 1
FragmentReplacedModification created 1
ModifiedNucleotide created 1
CellLineagePath created 1
Species created 1
SequenceOntology created 1
SimpleEntity created 1
Polymer created 1
PhysicalEntityCellType created 1
RegulationReference created 1
InteractionEvent created 1
InstanceEdit created 1
InterChainCrosslinkedResidue created 1
EntityFunctionalStatus created 1
ReferenceMolecule created 1
Event created 1
FragmentInsertionModification created 1
Complex created 1
Drug created 1
StableIdentifier created 1
FunctionalStatusType created 1
PsiMod created 1
GroupModifiedResidue created 1
Publication created 1
EntitySet created 1
FragmentDeletionModification created 1
ProteinDrug created 1
ChemicalDrug created 1
ReviewStatus created 1
CellType created 1
ControlledVocabulary created 1
Polymerisation created 1
EvidenceType created 1
Reaction created 1
DrugActionType created 1
Anatomy created 1
Summation created 1
Requirement created 1
StableIdentifierHistory created 1
CatalystActivity created 1
FailedReaction created 1
NonsenseMutation created 1
GO_CellularComponent created 1
ReferenceDNASequence created 1
FunctionalStatus created 1
IntraChainCrosslinkedResidue created 1
Depolymerisation created 1
ReferenceIsoform created 1
StableIdentifierReleaseStatus created 1
PositiveRegulation created 1
ChemicalDrug authored 1
BlackBoxEvent authored +
ProteinDrug authored 1
CandidateSet authored 1
EntitySet authored 1
CellDevelopmentStep authored +
Pathway authored +
SimpleEntity authored 1
Polymer authored 1
CellLineagePath authored +
Reaction authored +
Polymerisation authored +
InteractionEvent authored +
DefinedSet authored 1
OtherEntity authored 1
EntityWithAccessionedSequence authored 1
Depolymerisation authored +
RNADrug authored 1
PhysicalEntity authored 1
FailedReaction authored +
ReactionlikeEvent authored +
Cell authored 1
Drug authored 1
Complex authored 1
Event authored +
GenomeEncodedEntity authored 1
BlackBoxEvent reviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
CellDevelopmentStep reviewed +
Pathway reviewed +
EntitySet reviewed +
SimpleEntity reviewed +
Polymer reviewed +
Polymerisation reviewed +
Reaction reviewed +
CellLineagePath reviewed +
DefinedSet reviewed +
InteractionEvent reviewed +
OtherEntity reviewed +
Depolymerisation reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
RNADrug reviewed +
ReactionlikeEvent reviewed +
Cell reviewed +
Drug reviewed +
Event reviewed +
Complex reviewed +
GenomeEncodedEntity reviewed +
Complex edited +
Event edited +
GenomeEncodedEntity edited +
Cell edited +
Drug edited +
RNADrug edited +
PhysicalEntity edited +
FailedReaction edited +
ReactionlikeEvent edited +
DefinedSet edited +
InteractionEvent edited +
OtherEntity edited +
EntityWithAccessionedSequence edited +
Depolymerisation edited +
CellLineagePath edited +
Reaction edited +
Polymerisation edited +
SimpleEntity edited +
Polymer edited +
CandidateSet edited +
EntitySet edited +
CellDevelopmentStep edited +
Pathway edited +
ChemicalDrug edited +
BlackBoxEvent edited +
ProteinDrug edited +
ReactionlikeEvent revised +
RNADrug revised +
FailedReaction revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
Depolymerisation revised +
DefinedSet revised +
InteractionEvent revised +
OtherEntity revised +
GenomeEncodedEntity revised +
Complex revised +
Event revised +
Drug revised +
Cell revised +
EntitySet revised +
CellDevelopmentStep revised +
Pathway revised +
CandidateSet revised +
ChemicalDrug revised +
BlackBoxEvent revised +
ProteinDrug revised +
CellLineagePath revised +
Reaction revised +
Polymerisation revised +
Polymer revised +
SimpleEntity revised +
DefinedSet modified +
OtherEntity modified +
_UpdateTracker modified +
Figure modified +
GO_BiologicalProcess modified +
PhysicalEntity modified +
GeneticallyModifiedResidue modified +
CatalystActivityReference modified +
RNADrug modified +
TranslationalModification modified +
TranscriptionalModification modified +
Taxon modified +
GO_MolecularFunction modified +
GenomeEncodedEntity modified +
_Deleted modified +
FrontPage modified +
MarkerReference modified +
ReferenceEntity modified +
CrosslinkedResidue modified +
DeletedControlledVocabulary modified +
CandidateSet modified +
NegativeRegulation modified +
CellDevelopmentStep modified +
Pathway modified +
_Release modified +
ReferenceTherapeutic modified +
Person modified +
Regulation modified +
Book modified +
ReferenceDatabase modified +
AbstractModifiedResidue modified +
ModifiedResidue modified +
EntityWithAccessionedSequence modified +
ReactionlikeEvent modified +
ExternalOntology modified +
NegativePrecedingEvent modified +
DatabaseObject modified +
Cell modified +
URL modified +
Disease modified +
FragmentModification modified +
ReferenceSequence modified +
ReferenceGroup modified +
_DeletedInstance modified +
Compartment modified +
NegativeGeneExpressionRegulation modified +
PathwayDiagram modified +
DatabaseIdentifier modified +
ControlReference modified +
ReferenceRNASequence modified +
ReferenceGeneProduct modified +
IntraChainCrosslinkedResidue modified +
Depolymerisation modified +
ReferenceIsoform modified +
StableIdentifierReleaseStatus modified +
GO_CellularComponent modified +
NonsenseMutation modified +
FailedReaction modified +
ReferenceDNASequence modified +
FunctionalStatus modified +
PositiveRegulation modified +
ProteinDrug modified +
FragmentDeletionModification modified +
ChemicalDrug modified +
ReviewStatus modified +
CellType modified +
ControlledVocabulary modified +
Publication modified +
EntitySet modified +
Anatomy modified +
Summation modified +
Requirement modified +
StableIdentifierHistory modified +
CatalystActivity modified +
EvidenceType modified +
Polymerisation modified +
Reaction modified +
DrugActionType modified +
InteractionEvent modified +
InstanceEdit modified +
InterChainCrosslinkedResidue modified +
EntityFunctionalStatus modified +
ReferenceMolecule modified +
PhysicalEntityCellType modified +
RegulationReference modified +
Drug modified +
StableIdentifier modified +
FunctionalStatusType modified +
PsiMod modified +
GroupModifiedResidue modified +
Event modified +
FragmentInsertionModification modified +
Complex modified +
BlackBoxEvent modified +
Affiliation modified +
FragmentReplacedModification modified +
ReactionType modified +
RetractionStatus modified +
NegativePrecedingEventReason modified +
ReplacedResidue modified +
PositiveGeneExpressionRegulation modified +
LiteratureReference modified +
SimpleEntity modified +
SequenceOntology modified +
Species modified +
Polymer modified +
ModifiedNucleotide modified +
CellLineagePath modified +
Reaction internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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