Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_UpdateTracker modified +
DeletedControlledVocabulary modified +
Polymerisation modified +
RetractionStatus modified +
EntitySet modified +
ModifiedNucleotide modified +
CatalystActivityReference modified +
MarkerReference modified +
Reaction modified +
DatabaseIdentifier modified +
Cell modified +
OtherEntity modified +
Requirement modified +
PositiveRegulation modified +
PsiMod modified +
GeneticallyModifiedResidue modified +
GenomeEncodedEntity modified +
CandidateSet modified +
PositiveGeneExpressionRegulation modified +
ReplacedResidue modified +
EntityFunctionalStatus modified +
Regulation modified +
FunctionalStatus modified +
ExternalOntology modified +
Compartment modified +
Depolymerisation modified +
ReferenceEntity modified +
FragmentInsertionModification modified +
Affiliation modified +
_Release modified +
CellDevelopmentStep modified +
InteractionEvent modified +
PathwayDiagram modified +
_Deleted modified +
Figure modified +
Taxon modified +
NonsenseMutation modified +
Anatomy modified +
SequenceOntology modified +
TranslationalModification modified +
CatalystActivity modified +
NegativePrecedingEvent modified +
CrosslinkedResidue modified +
SimpleEntity modified +
NegativeGeneExpressionRegulation modified +
URL modified +
NegativePrecedingEventReason modified +
ProteinDrug modified +
RNADrug modified +
Person modified +
StableIdentifierHistory modified +
ReferenceDatabase modified +
ReferenceTherapeutic modified +
ReferenceMolecule modified +
_DeletedInstance modified +
Complex modified +
ControlledVocabulary modified +
EvidenceType modified +
LiteratureReference modified +
FunctionalStatusType modified +
ControlReference modified +
NegativeRegulation modified +
IntraChainCrosslinkedResidue modified +
FailedReaction modified +
ReviewStatus modified +
GroupModifiedResidue modified +
GO_BiologicalProcess modified +
AbstractModifiedResidue modified +
Polymer modified +
TranscriptionalModification modified +
EntityWithAccessionedSequence modified +
StableIdentifier modified +
CellLineagePath modified +
ReferenceDNASequence modified +
BlackBoxEvent modified +
PhysicalEntityCellType modified +
FrontPage modified +
PhysicalEntity modified +
StableIdentifierReleaseStatus modified +
ChemicalDrug modified +
ReactionType modified +
Species modified +
Publication modified +
ReferenceGeneProduct modified +
GO_CellularComponent modified +
FragmentDeletionModification modified +
Event modified +
FragmentModification modified +
FragmentReplacedModification modified +
RegulationReference modified +
ReferenceRNASequence modified +
Pathway modified +
Disease modified +
DrugActionType modified +
ReferenceSequence modified +
GO_MolecularFunction modified +
ModifiedResidue modified +
ReferenceGroup modified +
ReferenceIsoform modified +
DefinedSet modified +
Book modified +
Summation modified +
InstanceEdit modified +
Drug modified +
DatabaseObject modified +
InterChainCrosslinkedResidue modified +
ReactionlikeEvent modified +
CellType modified +
ReactionlikeEvent reviewed +
ProteinDrug reviewed +
Drug reviewed +
CellLineagePath reviewed +
CandidateSet reviewed +
RNADrug reviewed +
EntityWithAccessionedSequence reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
DefinedSet reviewed +
Polymer reviewed +
Pathway reviewed +
Cell reviewed +
OtherEntity reviewed +
Reaction reviewed +
FailedReaction reviewed +
InteractionEvent reviewed +
Event reviewed +
CellDevelopmentStep reviewed +
EntitySet reviewed +
ChemicalDrug reviewed +
Complex reviewed +
Polymerisation reviewed +
PhysicalEntity reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
_Deleted replacementInstances +
Pathway structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
Event structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
BlackBoxEvent authored +
Depolymerisation authored +
Polymerisation authored +
PhysicalEntity authored 1
Complex authored 1
ChemicalDrug authored 1
CellDevelopmentStep authored +
EntitySet authored 1
InteractionEvent authored +
Event authored +
FailedReaction authored +
Reaction authored +
Cell authored 1
Pathway authored +
OtherEntity authored 1
Polymer authored 1
DefinedSet authored 1
SimpleEntity authored 1
EntityWithAccessionedSequence authored 1
GenomeEncodedEntity authored 1
ProteinDrug authored 1
CellLineagePath authored +
Drug authored 1
CandidateSet authored 1
RNADrug authored 1
ReactionlikeEvent authored +
Polymerisation edited +
PhysicalEntity edited +
Depolymerisation edited +
BlackBoxEvent edited +
ChemicalDrug edited +
Complex edited +
Event edited +
InteractionEvent edited +
CellDevelopmentStep edited +
EntitySet edited +
Reaction edited +
FailedReaction edited +
OtherEntity edited +
Pathway edited +
Cell edited +
DefinedSet edited +
Polymer edited +
GenomeEncodedEntity edited +
EntityWithAccessionedSequence edited +
SimpleEntity edited +
ReactionlikeEvent edited +
RNADrug edited +
CellLineagePath edited +
ProteinDrug edited +
Drug edited +
CandidateSet edited +
PhysicalEntity revised +
Polymerisation revised +
Depolymerisation revised +
BlackBoxEvent revised +
ChemicalDrug revised +
Complex revised +
Event revised +
InteractionEvent revised +
EntitySet revised +
CellDevelopmentStep revised +
Reaction revised +
FailedReaction revised +
OtherEntity revised +
Cell revised +
Pathway revised +
DefinedSet revised +
Polymer revised +
GenomeEncodedEntity revised +
EntityWithAccessionedSequence revised +
SimpleEntity revised +
ReactionlikeEvent revised +
RNADrug revised +
CandidateSet revised +
ProteinDrug revised +
CellLineagePath revised +
Drug revised +
CrosslinkedResidue created 1
SimpleEntity created 1
NegativeGeneExpressionRegulation created 1
URL created 1
RNADrug created 1
Person created 1
NegativePrecedingEventReason created 1
ProteinDrug created 1
StableIdentifierHistory created 1
ReferenceDatabase created 1
NonsenseMutation created 1
Anatomy created 1
TranslationalModification created 1
CatalystActivity created 1
SequenceOntology created 1
NegativePrecedingEvent created 1
CellDevelopmentStep created 1
InteractionEvent created 1
_Deleted created 1
Figure created 1
PathwayDiagram created 1
Taxon created 1
Depolymerisation created 1
Compartment created 1
ExternalOntology created 1
FunctionalStatus created 1
Affiliation created 1
FragmentInsertionModification created 1
ReferenceEntity created 1
_Release created 1
GeneticallyModifiedResidue created 1
GenomeEncodedEntity created 1
PsiMod created 1
ReplacedResidue created 1
PositiveGeneExpressionRegulation created 1
CandidateSet created 1
Regulation created 1
EntityFunctionalStatus created 1
OtherEntity created 1
Cell created 1
DatabaseIdentifier created 1
Requirement created 1
PositiveRegulation created 1
ModifiedNucleotide created 1
EntitySet created 1
CatalystActivityReference created 1
MarkerReference created 1
Reaction created 1
_UpdateTracker created 1
RetractionStatus created 1
Polymerisation created 1
DeletedControlledVocabulary created 1
Book created 1
InstanceEdit created 1
Summation created 1
DatabaseObject created 1
Drug created 1
ReactionlikeEvent created 1
CellType created 1
InterChainCrosslinkedResidue created 1
Disease created 1
DrugActionType created 1
ReferenceRNASequence created 1
Pathway created 1
GO_MolecularFunction created 1
ReferenceSequence created 1
ModifiedResidue created 1
DefinedSet created 1
ReferenceIsoform created 1
ReferenceGroup created 1
Publication created 1
Event created 1
FragmentModification created 1
GO_CellularComponent created 1
ReferenceGeneProduct created 1
FragmentDeletionModification created 1
RegulationReference created 1
FragmentReplacedModification created 1
PhysicalEntityCellType created 1
FrontPage created 1
BlackBoxEvent created 1
StableIdentifierReleaseStatus created 1
PhysicalEntity created 1
Species created 1
ReactionType created 1
ChemicalDrug created 1
EntityWithAccessionedSequence created 1
StableIdentifier created 1
CellLineagePath created 1
ReferenceDNASequence created 1
ReviewStatus created 1
GO_BiologicalProcess created 1
GroupModifiedResidue created 1
Polymer created 1
AbstractModifiedResidue created 1
TranscriptionalModification created 1
FunctionalStatusType created 1
ControlReference created 1
FailedReaction created 1
IntraChainCrosslinkedResidue created 1
NegativeRegulation created 1
ReferenceMolecule created 1
ReferenceTherapeutic created 1
_DeletedInstance created 1
ControlledVocabulary created 1
Complex created 1
LiteratureReference created 1
EvidenceType created 1
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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