Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymerisation authored +
BlackBoxEvent authored +
Complex authored 1
GenomeEncodedEntity authored 1
CandidateSet authored 1
FailedReaction authored +
CellLineagePath authored +
OtherEntity authored 1
Pathway authored +
Polymer authored 1
Cell authored 1
RNADrug authored 1
Event authored +
SimpleEntity authored 1
Drug authored 1
InteractionEvent authored +
Depolymerisation authored +
ReactionlikeEvent authored +
ChemicalDrug authored 1
EntitySet authored 1
DefinedSet authored 1
Reaction authored +
ProteinDrug authored 1
CellDevelopmentStep authored +
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
Reaction reviewed +
EntitySet reviewed +
ChemicalDrug reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
Drug reviewed +
InteractionEvent reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
Complex reviewed +
Polymerisation reviewed +
SimpleEntity reviewed +
Event reviewed +
RNADrug reviewed +
Cell reviewed +
OtherEntity reviewed +
CellLineagePath reviewed +
FailedReaction reviewed +
Pathway reviewed +
Polymer reviewed +
ReferenceSequence created 1
Requirement created 1
PositiveGeneExpressionRegulation created 1
ReferenceGroup created 1
SequenceOntology created 1
RNADrug created 1
Cell created 1
RetractionStatus created 1
FailedReaction created 1
SimpleEntity created 1
NonsenseMutation created 1
Book created 1
EntityFunctionalStatus created 1
DeletedControlledVocabulary created 1
Depolymerisation created 1
RegulationReference created 1
TranscriptionalModification created 1
ReactionlikeEvent created 1
NegativePrecedingEventReason created 1
CellType created 1
LiteratureReference created 1
PsiMod created 1
CellDevelopmentStep created 1
Regulation created 1
_DeletedInstance created 1
ReferenceTherapeutic created 1
PhysicalEntity created 1
Complex created 1
_Deleted created 1
NegativePrecedingEvent created 1
GroupModifiedResidue created 1
_Release created 1
FragmentModification created 1
CellLineagePath created 1
OtherEntity created 1
InstanceEdit created 1
Pathway created 1
Polymer created 1
FunctionalStatusType created 1
Event created 1
ReactionType created 1
MarkerReference created 1
ReferenceIsoform created 1
Reaction created 1
ReferenceMolecule created 1
Taxon created 1
NegativeRegulation created 1
Summation created 1
EntitySet created 1
FrontPage created 1
ProteinDrug created 1
FunctionalStatus created 1
Figure created 1
Person created 1
ExternalOntology created 1
ControlledVocabulary created 1
InterChainCrosslinkedResidue created 1
ReplacedResidue created 1
StableIdentifier created 1
GeneticallyModifiedResidue created 1
GO_CellularComponent created 1
StableIdentifierReleaseStatus created 1
Polymerisation created 1
ModifiedResidue created 1
GenomeEncodedEntity created 1
AbstractModifiedResidue created 1
Species created 1
GO_MolecularFunction created 1
TranslationalModification created 1
FragmentReplacedModification created 1
Publication created 1
DatabaseIdentifier created 1
InteractionEvent created 1
ControlReference created 1
PositiveRegulation created 1
DefinedSet created 1
CatalystActivity created 1
ReferenceDNASequence created 1
FragmentInsertionModification created 1
ReferenceEntity created 1
_UpdateTracker created 1
NegativeGeneExpressionRegulation created 1
BlackBoxEvent created 1
GO_BiologicalProcess created 1
CandidateSet created 1
ReviewStatus created 1
Anatomy created 1
IntraChainCrosslinkedResidue created 1
FragmentDeletionModification created 1
URL created 1
ReferenceRNASequence created 1
ReferenceGeneProduct created 1
DatabaseObject created 1
CrosslinkedResidue created 1
Affiliation created 1
EvidenceType created 1
Disease created 1
Drug created 1
PhysicalEntityCellType created 1
StableIdentifierHistory created 1
Compartment created 1
ChemicalDrug created 1
ReferenceDatabase created 1
ModifiedNucleotide created 1
EntityWithAccessionedSequence created 1
DrugActionType created 1
PathwayDiagram created 1
CatalystActivityReference created 1
FrontPage modified +
ProteinDrug modified +
FunctionalStatus modified +
Figure modified +
Person modified +
ExternalOntology modified +
ControlledVocabulary modified +
InterChainCrosslinkedResidue modified +
ReplacedResidue modified +
StableIdentifier modified +
GeneticallyModifiedResidue modified +
MarkerReference modified +
ReferenceIsoform modified +
Taxon modified +
ReferenceMolecule modified +
Reaction modified +
Summation modified +
NegativeRegulation modified +
EntitySet modified +
CellLineagePath modified +
OtherEntity modified +
InstanceEdit modified +
Polymer modified +
Pathway modified +
FunctionalStatusType modified +
Event modified +
ReactionType modified +
Complex modified +
_Deleted modified +
NegativePrecedingEvent modified +
GroupModifiedResidue modified +
_Release modified +
FragmentModification modified +
CellDevelopmentStep modified +
Regulation modified +
ReferenceTherapeutic modified +
_DeletedInstance modified +
PhysicalEntity modified +
Depolymerisation modified +
TranscriptionalModification modified +
RegulationReference modified +
ReactionlikeEvent modified +
NegativePrecedingEventReason modified +
CellType modified +
LiteratureReference modified +
PsiMod modified +
RNADrug modified +
Cell modified +
RetractionStatus modified +
FailedReaction modified +
NonsenseMutation modified +
SimpleEntity modified +
Book modified +
EntityFunctionalStatus modified +
DeletedControlledVocabulary modified +
ReferenceSequence modified +
Requirement modified +
PositiveGeneExpressionRegulation modified +
ReferenceGroup modified +
SequenceOntology modified +
ModifiedNucleotide modified +
EntityWithAccessionedSequence modified +
DrugActionType modified +
CatalystActivityReference modified +
PathwayDiagram modified +
Affiliation modified +
EvidenceType modified +
Disease modified +
Drug modified +
PhysicalEntityCellType modified +
StableIdentifierHistory modified +
Compartment modified +
ChemicalDrug modified +
ReferenceDatabase modified +
ReviewStatus modified +
IntraChainCrosslinkedResidue modified +
Anatomy modified +
FragmentDeletionModification modified +
URL modified +
ReferenceRNASequence modified +
ReferenceGeneProduct modified +
DatabaseObject modified +
CrosslinkedResidue modified +
BlackBoxEvent modified +
GO_BiologicalProcess modified +
CandidateSet modified +
ReferenceDNASequence modified +
ReferenceEntity modified +
FragmentInsertionModification modified +
_UpdateTracker modified +
NegativeGeneExpressionRegulation modified +
Publication modified +
DatabaseIdentifier modified +
InteractionEvent modified +
DefinedSet modified +
PositiveRegulation modified +
ControlReference modified +
CatalystActivity modified +
Species modified +
GO_MolecularFunction modified +
TranslationalModification modified +
FragmentReplacedModification modified +
GO_CellularComponent modified +
StableIdentifierReleaseStatus modified +
ModifiedResidue modified +
Polymerisation modified +
GenomeEncodedEntity modified +
AbstractModifiedResidue modified +
ReactionlikeEvent edited +
Depolymerisation edited +
InteractionEvent edited +
Drug edited +
Reaction edited +
ChemicalDrug edited +
EntitySet edited +
DefinedSet edited +
CellDevelopmentStep edited +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
PhysicalEntity edited +
Complex edited +
BlackBoxEvent edited +
Polymerisation edited +
CandidateSet edited +
GenomeEncodedEntity edited +
RNADrug edited +
Cell edited +
Polymer edited +
Pathway edited +
CellLineagePath edited +
OtherEntity edited +
FailedReaction edited +
SimpleEntity edited +
Event edited +
Event structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
InteractionEvent revised +
Drug revised +
ReactionlikeEvent revised +
Depolymerisation revised +
EntitySet revised +
DefinedSet revised +
ChemicalDrug revised +
Reaction revised +
ProteinDrug revised +
CellDevelopmentStep revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
Polymerisation revised +
Complex revised +
BlackBoxEvent revised +
GenomeEncodedEntity revised +
CandidateSet revised +
Pathway revised +
Polymer revised +
CellLineagePath revised +
OtherEntity revised +
FailedReaction revised +
Cell revised +
RNADrug revised +
Event revised +
SimpleEntity revised +
_Deleted replacementInstances +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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