Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
StableIdentifier created 1
FragmentDeletionModification created 1
EntityWithAccessionedSequence created 1
Requirement created 1
FragmentModification created 1
Reaction created 1
Person created 1
Complex created 1
StableIdentifierHistory created 1
NonsenseMutation created 1
FailedReaction created 1
ReferenceSequence created 1
PhysicalEntity created 1
ReplacedResidue created 1
_UpdateTracker created 1
GenomeEncodedEntity created 1
NegativeRegulation created 1
DatabaseIdentifier created 1
DeletedControlledVocabulary created 1
EntitySet created 1
ReactionlikeEvent created 1
Drug created 1
RNADrug created 1
ReferenceIsoform created 1
ControlReference created 1
MarkerReference created 1
Regulation created 1
PhysicalEntityCellType created 1
URL created 1
ReferenceGroup created 1
AbstractModifiedResidue created 1
ReferenceDatabase created 1
CellLineagePath created 1
ReferenceEntity created 1
FunctionalStatusType created 1
ReferenceDNASequence created 1
ExternalOntology created 1
Figure created 1
NegativePrecedingEventReason created 1
_DeletedInstance created 1
PositiveGeneExpressionRegulation created 1
Compartment created 1
Taxon created 1
GO_BiologicalProcess created 1
CellDevelopmentStep created 1
CandidateSet created 1
ControlledVocabulary created 1
InteractionEvent created 1
StableIdentifierReleaseStatus created 1
CatalystActivity created 1
GO_CellularComponent created 1
Publication created 1
Cell created 1
Anatomy created 1
ModifiedNucleotide created 1
CatalystActivityReference created 1
ReferenceRNASequence created 1
GroupModifiedResidue created 1
CellType created 1
ReferenceGeneProduct created 1
GeneticallyModifiedResidue created 1
DefinedSet created 1
ModifiedResidue created 1
InterChainCrosslinkedResidue created 1
IntraChainCrosslinkedResidue created 1
OtherEntity created 1
ReferenceMolecule created 1
FrontPage created 1
Pathway created 1
EntityFunctionalStatus created 1
Polymerisation created 1
Polymer created 1
EvidenceType created 1
SequenceOntology created 1
PathwayDiagram created 1
TranslationalModification created 1
_Deleted created 1
NegativeGeneExpressionRegulation created 1
ChemicalDrug created 1
Depolymerisation created 1
LiteratureReference created 1
FragmentReplacedModification created 1
Disease created 1
PsiMod created 1
RegulationReference created 1
FunctionalStatus created 1
BlackBoxEvent created 1
PositiveRegulation created 1
SimpleEntity created 1
ReferenceTherapeutic created 1
NegativePrecedingEvent created 1
Book created 1
RetractionStatus created 1
DrugActionType created 1
InstanceEdit created 1
ReviewStatus created 1
Species created 1
TranscriptionalModification created 1
FragmentInsertionModification created 1
GO_MolecularFunction created 1
ReactionType created 1
ProteinDrug created 1
CrosslinkedResidue created 1
DatabaseObject created 1
Summation created 1
Event created 1
Affiliation created 1
_Release created 1
FailedReaction authored +
PhysicalEntity authored 1
GenomeEncodedEntity authored 1
CellDevelopmentStep authored +
CandidateSet authored 1
ProteinDrug authored 1
ChemicalDrug authored 1
Depolymerisation authored +
EntitySet authored 1
ReactionlikeEvent authored +
Drug authored 1
RNADrug authored 1
Event authored +
InteractionEvent authored +
Cell authored 1
EntityWithAccessionedSequence authored 1
CellLineagePath authored +
DefinedSet authored 1
BlackBoxEvent authored +
OtherEntity authored 1
Reaction authored +
SimpleEntity authored 1
Pathway authored +
Polymerisation authored +
Polymer authored 1
Complex authored 1
_Deleted replacementInstances +
Summation modified +
Event modified +
Affiliation modified +
_Release modified +
Species modified +
ReviewStatus modified +
GO_MolecularFunction modified +
FragmentInsertionModification modified +
TranscriptionalModification modified +
ProteinDrug modified +
ReactionType modified +
CrosslinkedResidue modified +
DatabaseObject modified +
SimpleEntity modified +
ReferenceTherapeutic modified +
Book modified +
NegativePrecedingEvent modified +
RetractionStatus modified +
InstanceEdit modified +
DrugActionType modified +
FunctionalStatus modified +
BlackBoxEvent modified +
PositiveRegulation modified +
Disease modified +
FragmentReplacedModification modified +
PsiMod modified +
RegulationReference modified +
SequenceOntology modified +
_Deleted modified +
ChemicalDrug modified +
NegativeGeneExpressionRegulation modified +
Depolymerisation modified +
PathwayDiagram modified +
TranslationalModification modified +
LiteratureReference modified +
FrontPage modified +
EntityFunctionalStatus modified +
Pathway modified +
Polymerisation modified +
EvidenceType modified +
Polymer modified +
GroupModifiedResidue modified +
ReferenceRNASequence modified +
ReferenceGeneProduct modified +
GeneticallyModifiedResidue modified +
DefinedSet modified +
ModifiedResidue modified +
CellType modified +
OtherEntity modified +
IntraChainCrosslinkedResidue modified +
ReferenceMolecule modified +
InterChainCrosslinkedResidue modified +
StableIdentifierReleaseStatus modified +
ControlledVocabulary modified +
InteractionEvent modified +
GO_CellularComponent modified +
CatalystActivity modified +
ModifiedNucleotide modified +
Publication modified +
Cell modified +
Anatomy modified +
CatalystActivityReference modified +
GO_BiologicalProcess modified +
CellDevelopmentStep modified +
CandidateSet modified +
ReferenceDNASequence modified +
ExternalOntology modified +
NegativePrecedingEventReason modified +
Figure modified +
Compartment modified +
_DeletedInstance modified +
PositiveGeneExpressionRegulation modified +
Taxon modified +
CellLineagePath modified +
ReferenceDatabase modified +
FunctionalStatusType modified +
ReferenceEntity modified +
ControlReference modified +
ReferenceIsoform modified +
PhysicalEntityCellType modified +
Regulation modified +
MarkerReference modified +
ReferenceGroup modified +
URL modified +
AbstractModifiedResidue modified +
ReplacedResidue modified +
_UpdateTracker modified +
PhysicalEntity modified +
ReferenceSequence modified +
FailedReaction modified +
GenomeEncodedEntity modified +
DatabaseIdentifier modified +
NegativeRegulation modified +
DeletedControlledVocabulary modified +
RNADrug modified +
Drug modified +
ReactionlikeEvent modified +
EntitySet modified +
Reaction modified +
Person modified +
StableIdentifierHistory modified +
Complex modified +
NonsenseMutation modified +
EntityWithAccessionedSequence modified +
StableIdentifier modified +
FragmentDeletionModification modified +
Requirement modified +
FragmentModification modified +
Polymerisation internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Cell revised +
Event revised +
InteractionEvent revised +
CandidateSet revised +
Depolymerisation revised +
ChemicalDrug revised +
ProteinDrug revised +
EntitySet revised +
RNADrug revised +
ReactionlikeEvent revised +
Drug revised +
FailedReaction revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
GenomeEncodedEntity revised +
Polymerisation revised +
Polymer revised +
Complex revised +
Reaction revised +
SimpleEntity revised +
Pathway revised +
DefinedSet revised +
BlackBoxEvent revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
CellLineagePath revised +
SimpleEntity edited +
Reaction edited +
Pathway edited +
Polymerisation edited +
Complex edited +
Polymer edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
DefinedSet edited +
OtherEntity edited +
BlackBoxEvent edited +
Event edited +
InteractionEvent edited +
Cell edited +
PhysicalEntity edited +
FailedReaction edited +
GenomeEncodedEntity edited +
CellDevelopmentStep edited +
Depolymerisation edited +
ChemicalDrug edited +
ProteinDrug edited +
CandidateSet edited +
Drug edited +
ReactionlikeEvent edited +
RNADrug edited +
EntitySet edited +
Polymerisation reviewed +
Complex reviewed +
Polymer reviewed +
Reaction reviewed +
SimpleEntity reviewed +
Pathway reviewed +
DefinedSet reviewed +
BlackBoxEvent reviewed +
OtherEntity reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
Cell reviewed +
InteractionEvent reviewed +
Event reviewed +
CandidateSet reviewed +
Depolymerisation reviewed +
ChemicalDrug reviewed +
ProteinDrug reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
RNADrug reviewed +
Drug reviewed +
FailedReaction reviewed +
PhysicalEntity reviewed +
GenomeEncodedEntity reviewed +
CellDevelopmentStep reviewed +
Polymerisation structureModified +
Pathway structureModified +
Reaction structureModified +
Event structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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