Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReferenceMolecule modified +
IntraChainCrosslinkedResidue modified +
Summation modified +
FunctionalStatusType modified +
CatalystActivity modified +
ExternalOntology modified +
FunctionalStatus modified +
CatalystActivityReference modified +
_Deleted modified +
Publication modified +
DeletedControlledVocabulary modified +
ControlledVocabulary modified +
Pathway modified +
CandidateSet modified +
ReferenceRNASequence modified +
StableIdentifierHistory modified +
GeneticallyModifiedResidue modified +
EntitySet modified +
Species modified +
ReplacedResidue modified +
GO_MolecularFunction modified +
ControlReference modified +
Regulation modified +
MarkerReference modified +
ReactionlikeEvent modified +
ReferenceEntity modified +
RegulationReference modified +
Drug modified +
CellLineagePath modified +
RetractionStatus modified +
FrontPage modified +
FragmentInsertionModification modified +
ModifiedResidue modified +
EvidenceType modified +
PathwayDiagram modified +
ReactionType modified +
InterChainCrosslinkedResidue modified +
OtherEntity modified +
Compartment modified +
ReferenceIsoform modified +
FragmentModification modified +
GO_BiologicalProcess modified +
InstanceEdit modified +
PositiveGeneExpressionRegulation modified +
AbstractModifiedResidue modified +
SequenceOntology modified +
TranscriptionalModification modified +
PhysicalEntity modified +
StableIdentifier modified +
LiteratureReference modified +
ProteinDrug modified +
Affiliation modified +
ReferenceGroup modified +
RNADrug modified +
FragmentReplacedModification modified +
InteractionEvent modified +
_DeletedInstance modified +
NegativeGeneExpressionRegulation modified +
NegativeRegulation modified +
PositiveRegulation modified +
FragmentDeletionModification modified +
DrugActionType modified +
Person modified +
StableIdentifierReleaseStatus modified +
GroupModifiedResidue modified +
Polymer modified +
Requirement modified +
Book modified +
ReferenceTherapeutic modified +
Anatomy modified +
ChemicalDrug modified +
GO_CellularComponent modified +
Reaction modified +
DatabaseObject modified +
DefinedSet modified +
CellDevelopmentStep modified +
EntityWithAccessionedSequence modified +
CrosslinkedResidue modified +
FailedReaction modified +
Depolymerisation modified +
ReferenceDatabase modified +
BlackBoxEvent modified +
_Release modified +
CellType modified +
TranslationalModification modified +
DatabaseIdentifier modified +
EntityFunctionalStatus modified +
ModifiedNucleotide modified +
Polymerisation modified +
PsiMod modified +
SimpleEntity modified +
NonsenseMutation modified +
Complex modified +
ReferenceDNASequence modified +
ReferenceSequence modified +
NegativePrecedingEventReason modified +
Cell modified +
Disease modified +
Taxon modified +
Event modified +
Figure modified +
ReviewStatus modified +
URL modified +
ReferenceGeneProduct modified +
_UpdateTracker modified +
PhysicalEntityCellType modified +
GenomeEncodedEntity modified +
NegativePrecedingEvent modified +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
InteractionEvent internalReviewed +
_Deleted replacementInstances +
Complex reviewed +
SimpleEntity reviewed +
Polymerisation reviewed +
Polymer reviewed +
OtherEntity reviewed +
BlackBoxEvent reviewed +
Drug reviewed +
CellLineagePath reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
FailedReaction reviewed +
EntityWithAccessionedSequence reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
DefinedSet reviewed +
CellDevelopmentStep reviewed +
Event reviewed +
EntitySet reviewed +
Cell reviewed +
Reaction reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
ProteinDrug reviewed +
Pathway reviewed +
PhysicalEntity reviewed +
Drug revised +
BlackBoxEvent revised +
CellLineagePath revised +
OtherEntity revised +
Polymerisation revised +
Polymer revised +
SimpleEntity revised +
Complex revised +
PhysicalEntity revised +
Pathway revised +
CandidateSet revised +
ProteinDrug revised +
ChemicalDrug revised +
RNADrug revised +
Reaction revised +
Cell revised +
DefinedSet revised +
CellDevelopmentStep revised +
Event revised +
EntitySet revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
GenomeEncodedEntity revised +
FailedReaction revised +
ReactionlikeEvent revised +
Depolymerisation revised +
EntityWithAccessionedSequence edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
Depolymerisation edited +
ReactionlikeEvent edited +
FailedReaction edited +
ChemicalDrug edited +
CandidateSet edited +
ProteinDrug edited +
Pathway edited +
PhysicalEntity edited +
EntitySet edited +
DefinedSet edited +
CellDevelopmentStep edited +
Event edited +
Cell edited +
RNADrug edited +
Reaction edited +
Polymerisation edited +
Polymer edited +
OtherEntity edited +
Complex edited +
SimpleEntity edited +
BlackBoxEvent edited +
Drug edited +
CellLineagePath edited +
Person created 1
StableIdentifierReleaseStatus created 1
DrugActionType created 1
PositiveRegulation created 1
FragmentDeletionModification created 1
NegativeRegulation created 1
Book created 1
Requirement created 1
Polymer created 1
GroupModifiedResidue created 1
DatabaseObject created 1
CellDevelopmentStep created 1
DefinedSet created 1
Reaction created 1
GO_CellularComponent created 1
Anatomy created 1
ChemicalDrug created 1
ReferenceTherapeutic created 1
Depolymerisation created 1
FailedReaction created 1
EntityWithAccessionedSequence created 1
CrosslinkedResidue created 1
EntityFunctionalStatus created 1
DatabaseIdentifier created 1
TranslationalModification created 1
CellType created 1
_Release created 1
ReferenceDatabase created 1
BlackBoxEvent created 1
Complex created 1
SimpleEntity created 1
NonsenseMutation created 1
PsiMod created 1
Polymerisation created 1
ModifiedNucleotide created 1
URL created 1
Figure created 1
ReviewStatus created 1
Event created 1
Disease created 1
Taxon created 1
Cell created 1
NegativePrecedingEventReason created 1
ReferenceSequence created 1
ReferenceDNASequence created 1
NegativePrecedingEvent created 1
GenomeEncodedEntity created 1
PhysicalEntityCellType created 1
_UpdateTracker created 1
ReferenceGeneProduct created 1
FunctionalStatus created 1
FunctionalStatusType created 1
CatalystActivity created 1
ExternalOntology created 1
IntraChainCrosslinkedResidue created 1
Summation created 1
ReferenceMolecule created 1
DeletedControlledVocabulary created 1
Publication created 1
_Deleted created 1
CatalystActivityReference created 1
EntitySet created 1
GeneticallyModifiedResidue created 1
StableIdentifierHistory created 1
ReferenceRNASequence created 1
CandidateSet created 1
ControlledVocabulary created 1
Pathway created 1
RegulationReference created 1
ReferenceEntity created 1
ReactionlikeEvent created 1
Regulation created 1
MarkerReference created 1
ControlReference created 1
GO_MolecularFunction created 1
ReplacedResidue created 1
Species created 1
EvidenceType created 1
PathwayDiagram created 1
ReactionType created 1
ModifiedResidue created 1
FragmentInsertionModification created 1
RetractionStatus created 1
FrontPage created 1
CellLineagePath created 1
Drug created 1
SequenceOntology created 1
AbstractModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
GO_BiologicalProcess created 1
InstanceEdit created 1
ReferenceIsoform created 1
FragmentModification created 1
Compartment created 1
OtherEntity created 1
InterChainCrosslinkedResidue created 1
FragmentReplacedModification created 1
RNADrug created 1
ReferenceGroup created 1
Affiliation created 1
ProteinDrug created 1
LiteratureReference created 1
PhysicalEntity created 1
StableIdentifier created 1
TranscriptionalModification created 1
_DeletedInstance created 1
NegativeGeneExpressionRegulation created 1
InteractionEvent created 1
BlackBoxEvent structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
ReactionlikeEvent authored +
Depolymerisation authored +
FailedReaction authored +
GenomeEncodedEntity authored 1
EntityWithAccessionedSequence authored 1
InteractionEvent authored +
DefinedSet authored 1
CellDevelopmentStep authored +
EntitySet authored 1
Event authored +
RNADrug authored 1
Reaction authored +
Cell authored 1
ProteinDrug authored 1
CandidateSet authored 1
ChemicalDrug authored 1
PhysicalEntity authored 1
Pathway authored +
Complex authored 1
SimpleEntity authored 1
OtherEntity authored 1
Polymerisation authored +
Polymer authored 1
Drug authored 1
BlackBoxEvent authored +
CellLineagePath authored +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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