Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
FragmentReplacedModification modified +
ReferenceSequence modified +
ReferenceMolecule modified +
PhysicalEntity modified +
InstanceEdit modified +
ReferenceDatabase modified +
NegativePrecedingEvent modified +
Pathway modified +
ExternalOntology modified +
ModifiedResidue modified +
FrontPage modified +
EntityFunctionalStatus modified +
GenomeEncodedEntity modified +
Affiliation modified +
TranscriptionalModification modified +
Book modified +
CatalystActivity modified +
Person modified +
NegativePrecedingEventReason modified +
ReferenceDNASequence modified +
Complex modified +
PsiMod modified +
OtherEntity modified +
GO_CellularComponent modified +
CellDevelopmentStep modified +
GroupModifiedResidue modified +
GeneticallyModifiedResidue modified +
ReactionType modified +
Drug modified +
FunctionalStatusType modified +
StableIdentifier modified +
Anatomy modified +
Disease modified +
DefinedSet modified +
AbstractModifiedResidue modified +
ModifiedNucleotide modified +
TranslationalModification modified +
PositiveGeneExpressionRegulation modified +
RegulationReference modified +
EntityWithAccessionedSequence modified +
ReferenceEntity modified +
SimpleEntity modified +
ReferenceTherapeutic modified +
Compartment modified +
CandidateSet modified +
RNADrug modified +
PhysicalEntityCellType modified +
PathwayDiagram modified +
SequenceOntology modified +
GO_BiologicalProcess modified +
FragmentModification modified +
InteractionEvent modified +
ControlledVocabulary modified +
CellLineagePath modified +
_Release modified +
Requirement modified +
ChemicalDrug modified +
NonsenseMutation modified +
Summation modified +
Polymerisation modified +
Reaction modified +
ReviewStatus modified +
DatabaseObject modified +
Polymer modified +
Cell modified +
Taxon modified +
InterChainCrosslinkedResidue modified +
DatabaseIdentifier modified +
ReferenceRNASequence modified +
_UpdateTracker modified +
ReferenceGeneProduct modified +
NegativeRegulation modified +
LiteratureReference modified +
CatalystActivityReference modified +
ProteinDrug modified +
ReferenceGroup modified +
StableIdentifierHistory modified +
Publication modified +
Depolymerisation modified +
FragmentInsertionModification modified +
RetractionStatus modified +
PositiveRegulation modified +
CrosslinkedResidue modified +
ReferenceIsoform modified +
FailedReaction modified +
CellType modified +
FunctionalStatus modified +
ReactionlikeEvent modified +
EvidenceType modified +
Event modified +
FragmentDeletionModification modified +
MarkerReference modified +
ReplacedResidue modified +
NegativeGeneExpressionRegulation modified +
EntitySet modified +
ControlReference modified +
BlackBoxEvent modified +
_Deleted modified +
IntraChainCrosslinkedResidue modified +
DeletedControlledVocabulary modified +
Regulation modified +
Species modified +
URL modified +
GO_MolecularFunction modified +
Figure modified +
_DeletedInstance modified +
DrugActionType modified +
StableIdentifierReleaseStatus modified +
Reaction authored +
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
Polymerisation authored +
FailedReaction authored +
ChemicalDrug authored 1
Pathway authored +
DefinedSet authored 1
Depolymerisation authored +
PhysicalEntity authored 1
CellLineagePath authored +
InteractionEvent authored +
RNADrug authored 1
CandidateSet authored 1
Drug authored 1
ProteinDrug authored 1
BlackBoxEvent authored +
CellDevelopmentStep authored +
EntitySet authored 1
OtherEntity authored 1
Complex authored 1
SimpleEntity authored 1
Event authored +
Cell authored 1
Polymer authored 1
EntityWithAccessionedSequence authored 1
ReferenceEntity created 1
EntityWithAccessionedSequence created 1
ReferenceTherapeutic created 1
SimpleEntity created 1
Compartment created 1
RNADrug created 1
PhysicalEntityCellType created 1
CandidateSet created 1
FunctionalStatusType created 1
StableIdentifier created 1
AbstractModifiedResidue created 1
DefinedSet created 1
Disease created 1
Anatomy created 1
PositiveGeneExpressionRegulation created 1
TranslationalModification created 1
ModifiedNucleotide created 1
RegulationReference created 1
NegativePrecedingEventReason created 1
Person created 1
CatalystActivity created 1
Book created 1
TranscriptionalModification created 1
Affiliation created 1
OtherEntity created 1
PsiMod created 1
Complex created 1
ReferenceDNASequence created 1
ReactionType created 1
GeneticallyModifiedResidue created 1
GroupModifiedResidue created 1
CellDevelopmentStep created 1
GO_CellularComponent created 1
Drug created 1
InstanceEdit created 1
PhysicalEntity created 1
ReferenceMolecule created 1
ReferenceSequence created 1
FragmentReplacedModification created 1
Pathway created 1
NegativePrecedingEvent created 1
ReferenceDatabase created 1
ModifiedResidue created 1
ExternalOntology created 1
GenomeEncodedEntity created 1
EntityFunctionalStatus created 1
FrontPage created 1
Event created 1
EvidenceType created 1
NegativeGeneExpressionRegulation created 1
ReplacedResidue created 1
MarkerReference created 1
FragmentDeletionModification created 1
GO_MolecularFunction created 1
URL created 1
_Deleted created 1
ControlReference created 1
BlackBoxEvent created 1
DeletedControlledVocabulary created 1
IntraChainCrosslinkedResidue created 1
Regulation created 1
Species created 1
EntitySet created 1
DrugActionType created 1
StableIdentifierReleaseStatus created 1
_DeletedInstance created 1
Figure created 1
Depolymerisation created 1
Publication created 1
StableIdentifierHistory created 1
CrosslinkedResidue created 1
PositiveRegulation created 1
FragmentInsertionModification created 1
RetractionStatus created 1
CellType created 1
FailedReaction created 1
ReferenceIsoform created 1
ReactionlikeEvent created 1
FunctionalStatus created 1
InterChainCrosslinkedResidue created 1
Cell created 1
Taxon created 1
Polymer created 1
ReferenceRNASequence created 1
DatabaseIdentifier created 1
ProteinDrug created 1
ReferenceGroup created 1
LiteratureReference created 1
CatalystActivityReference created 1
NegativeRegulation created 1
_UpdateTracker created 1
ReferenceGeneProduct created 1
CellLineagePath created 1
ControlledVocabulary created 1
InteractionEvent created 1
GO_BiologicalProcess created 1
FragmentModification created 1
SequenceOntology created 1
PathwayDiagram created 1
Summation created 1
NonsenseMutation created 1
ChemicalDrug created 1
Requirement created 1
_Release created 1
Reaction created 1
DatabaseObject created 1
ReviewStatus created 1
Polymerisation created 1
InteractionEvent structureModified +
CellLineagePath structureModified +
Event structureModified +
Depolymerisation structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
DefinedSet edited +
Pathway edited +
InteractionEvent edited +
CellLineagePath edited +
PhysicalEntity edited +
Depolymerisation edited +
Polymerisation edited +
ReactionlikeEvent edited +
GenomeEncodedEntity edited +
Reaction edited +
ChemicalDrug edited +
FailedReaction edited +
SimpleEntity edited +
Complex edited +
OtherEntity edited +
EntityWithAccessionedSequence edited +
Polymer edited +
Cell edited +
Event edited +
CandidateSet edited +
Drug edited +
RNADrug edited +
EntitySet edited +
BlackBoxEvent edited +
CellDevelopmentStep edited +
ProteinDrug edited +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
_Deleted replacementInstances +
ProteinDrug reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
EntitySet reviewed +
RNADrug reviewed +
Drug reviewed +
CandidateSet reviewed +
Event reviewed +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
Polymer reviewed +
OtherEntity reviewed +
Complex reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
Reaction reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
Polymerisation reviewed +
Depolymerisation reviewed +
PhysicalEntity reviewed +
CellLineagePath reviewed +
InteractionEvent reviewed +
Pathway reviewed +
DefinedSet reviewed +
SimpleEntity revised +
Complex revised +
OtherEntity revised +
Polymer revised +
EntityWithAccessionedSequence revised +
Cell revised +
Event revised +
Drug revised +
CandidateSet revised +
RNADrug revised +
EntitySet revised +
BlackBoxEvent revised +
CellDevelopmentStep revised +
ProteinDrug revised +
DefinedSet revised +
Pathway revised +
InteractionEvent revised +
CellLineagePath revised +
PhysicalEntity revised +
Depolymerisation revised +
Polymerisation revised +
ReactionlikeEvent revised +
GenomeEncodedEntity revised +
Reaction revised +
ChemicalDrug revised +
FailedReaction revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

Follow Reactome