Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Pathway internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
RNADrug edited +
Event edited +
SimpleEntity edited +
Polymerisation edited +
GenomeEncodedEntity edited +
CellLineagePath edited +
Complex edited +
Depolymerisation edited +
Polymer edited +
PhysicalEntity edited +
BlackBoxEvent edited +
Pathway edited +
Drug edited +
InteractionEvent edited +
EntityWithAccessionedSequence edited +
FailedReaction edited +
DefinedSet edited +
ReactionlikeEvent edited +
CandidateSet edited +
ChemicalDrug edited +
Reaction edited +
Cell edited +
CellDevelopmentStep edited +
ProteinDrug edited +
OtherEntity edited +
EntitySet edited +
NegativePrecedingEventReason created 1
InterChainCrosslinkedResidue created 1
PositiveGeneExpressionRegulation created 1
GO_MolecularFunction created 1
Depolymerisation created 1
FrontPage created 1
TranscriptionalModification created 1
Drug created 1
DeletedControlledVocabulary created 1
_UpdateTracker created 1
BlackBoxEvent created 1
GO_BiologicalProcess created 1
ReferenceDNASequence created 1
_Deleted created 1
Cell created 1
ExternalOntology created 1
ReferenceIsoform created 1
NegativePrecedingEvent created 1
URL created 1
ReferenceEntity created 1
ReferenceRNASequence created 1
PositiveRegulation created 1
ReferenceSequence created 1
StableIdentifierHistory created 1
GeneticallyModifiedResidue created 1
Polymer created 1
GO_CellularComponent created 1
CellLineagePath created 1
CellType created 1
SimpleEntity created 1
StableIdentifierReleaseStatus created 1
GroupModifiedResidue created 1
StableIdentifier created 1
PsiMod created 1
FragmentInsertionModification created 1
OtherEntity created 1
Book created 1
_Release created 1
Disease created 1
CandidateSet created 1
Compartment created 1
Species created 1
LiteratureReference created 1
ReactionlikeEvent created 1
EntityFunctionalStatus created 1
CrosslinkedResidue created 1
DatabaseIdentifier created 1
ReplacedResidue created 1
ReferenceGroup created 1
FragmentModification created 1
_DeletedInstance created 1
RNADrug created 1
ControlledVocabulary created 1
PhysicalEntity created 1
Person created 1
Complex created 1
Anatomy created 1
Requirement created 1
NegativeRegulation created 1
Publication created 1
DatabaseObject created 1
NonsenseMutation created 1
FunctionalStatusType created 1
ReferenceDatabase created 1
Regulation created 1
InstanceEdit created 1
ModifiedResidue created 1
Taxon created 1
ChemicalDrug created 1
Reaction created 1
ModifiedNucleotide created 1
ReferenceMolecule created 1
FragmentDeletionModification created 1
ReferenceGeneProduct created 1
EntityWithAccessionedSequence created 1
Affiliation created 1
Event created 1
CatalystActivity created 1
AbstractModifiedResidue created 1
TranslationalModification created 1
MarkerReference created 1
ReferenceTherapeutic created 1
IntraChainCrosslinkedResidue created 1
NegativeGeneExpressionRegulation created 1
CatalystActivityReference created 1
Polymerisation created 1
FunctionalStatus created 1
GenomeEncodedEntity created 1
ReactionType created 1
Figure created 1
Pathway created 1
DrugActionType created 1
PhysicalEntityCellType created 1
RetractionStatus created 1
FragmentReplacedModification created 1
Summation created 1
ReviewStatus created 1
EntitySet created 1
EvidenceType created 1
CellDevelopmentStep created 1
RegulationReference created 1
ProteinDrug created 1
PathwayDiagram created 1
DefinedSet created 1
SequenceOntology created 1
InteractionEvent created 1
FailedReaction created 1
ControlReference created 1
BlackBoxEvent reviewed +
Drug reviewed +
Pathway reviewed +
ReactionlikeEvent reviewed +
DefinedSet reviewed +
FailedReaction reviewed +
EntityWithAccessionedSequence reviewed +
InteractionEvent reviewed +
EntitySet reviewed +
OtherEntity reviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
Cell reviewed +
Reaction reviewed +
CandidateSet reviewed +
CellDevelopmentStep reviewed +
RNADrug reviewed +
Event reviewed +
CellLineagePath reviewed +
Polymerisation reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
Depolymerisation reviewed +
Complex reviewed +
BlackBoxEvent authored +
Pathway authored +
Drug authored 1
DefinedSet authored 1
ReactionlikeEvent authored +
EntityWithAccessionedSequence authored 1
FailedReaction authored +
InteractionEvent authored +
OtherEntity authored 1
EntitySet authored 1
Reaction authored +
ChemicalDrug authored 1
CandidateSet authored 1
CellDevelopmentStep authored +
Cell authored 1
ProteinDrug authored 1
RNADrug authored 1
Event authored +
Polymerisation authored +
GenomeEncodedEntity authored 1
CellLineagePath authored +
SimpleEntity authored 1
PhysicalEntity authored 1
Complex authored 1
Depolymerisation authored +
Polymer authored 1
BlackBoxEvent structureModified +
Event structureModified +
Pathway structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Reaction structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
Drug revised +
Pathway revised +
BlackBoxEvent revised +
ProteinDrug revised +
Reaction revised +
ChemicalDrug revised +
CandidateSet revised +
CellDevelopmentStep revised +
Cell revised +
EntitySet revised +
OtherEntity revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
FailedReaction revised +
ReactionlikeEvent revised +
DefinedSet revised +
Event revised +
RNADrug revised +
Polymer revised +
Complex revised +
Depolymerisation revised +
PhysicalEntity revised +
SimpleEntity revised +
CellLineagePath revised +
Polymerisation revised +
GenomeEncodedEntity revised +
ReplacedResidue modified +
DatabaseIdentifier modified +
ReferenceGroup modified +
FragmentModification modified +
RNADrug modified +
_DeletedInstance modified +
ControlledVocabulary modified +
PhysicalEntity modified +
Anatomy modified +
Complex modified +
Person modified +
Requirement modified +
DatabaseObject modified +
NegativeRegulation modified +
Publication modified +
NonsenseMutation modified +
FunctionalStatusType modified +
ModifiedResidue modified +
ReferenceDatabase modified +
Regulation modified +
InstanceEdit modified +
Reaction modified +
Taxon modified +
ChemicalDrug modified +
ModifiedNucleotide modified +
FragmentDeletionModification modified +
ReferenceGeneProduct modified +
EntityWithAccessionedSequence modified +
ReferenceMolecule modified +
Affiliation modified +
Event modified +
CatalystActivity modified +
AbstractModifiedResidue modified +
MarkerReference modified +
TranslationalModification modified +
ReferenceTherapeutic modified +
IntraChainCrosslinkedResidue modified +
NegativeGeneExpressionRegulation modified +
ReactionType modified +
Polymerisation modified +
CatalystActivityReference modified +
FunctionalStatus modified +
GenomeEncodedEntity modified +
DrugActionType modified +
Pathway modified +
Figure modified +
RetractionStatus modified +
PhysicalEntityCellType modified +
Summation modified +
ReviewStatus modified +
FragmentReplacedModification modified +
EntitySet modified +
EvidenceType modified +
ProteinDrug modified +
RegulationReference modified +
CellDevelopmentStep modified +
PathwayDiagram modified +
DefinedSet modified +
SequenceOntology modified +
InteractionEvent modified +
FailedReaction modified +
ControlReference modified +
NegativePrecedingEventReason modified +
PositiveGeneExpressionRegulation modified +
InterChainCrosslinkedResidue modified +
GO_MolecularFunction modified +
Depolymerisation modified +
FrontPage modified +
TranscriptionalModification modified +
Drug modified +
DeletedControlledVocabulary modified +
_UpdateTracker modified +
ReferenceDNASequence modified +
_Deleted modified +
BlackBoxEvent modified +
GO_BiologicalProcess modified +
Cell modified +
ExternalOntology modified +
URL modified +
ReferenceIsoform modified +
NegativePrecedingEvent modified +
ReferenceRNASequence modified +
ReferenceEntity modified +
ReferenceSequence modified +
PositiveRegulation modified +
GeneticallyModifiedResidue modified +
Polymer modified +
StableIdentifierHistory modified +
GO_CellularComponent modified +
CellLineagePath modified +
SimpleEntity modified +
CellType modified +
StableIdentifierReleaseStatus modified +
GroupModifiedResidue modified +
StableIdentifier modified +
FragmentInsertionModification modified +
PsiMod modified +
Disease modified +
_Release modified +
Book modified +
OtherEntity modified +
Species modified +
CandidateSet modified +
Compartment modified +
ReactionlikeEvent modified +
LiteratureReference modified +
CrosslinkedResidue modified +
EntityFunctionalStatus modified +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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