Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
EntitySet edited +
Cell edited +
ProteinDrug edited +
CellDevelopmentStep edited +
DefinedSet edited +
CellLineagePath edited +
Complex edited +
Event edited +
GenomeEncodedEntity edited +
Reaction edited +
BlackBoxEvent edited +
OtherEntity edited +
PhysicalEntity edited +
ChemicalDrug edited +
CandidateSet edited +
Depolymerisation edited +
ReactionlikeEvent edited +
EntityWithAccessionedSequence edited +
Drug edited +
Polymerisation edited +
RNADrug edited +
Polymer edited +
FailedReaction edited +
SimpleEntity edited +
InteractionEvent edited +
Pathway edited +
RNADrug reviewed +
Polymerisation reviewed +
Drug reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
ReactionlikeEvent reviewed +
Depolymerisation reviewed +
ChemicalDrug reviewed +
InteractionEvent reviewed +
Pathway reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
Polymer reviewed +
CellLineagePath reviewed +
DefinedSet reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
Cell reviewed +
EntitySet reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
Reaction reviewed +
BlackBoxEvent reviewed +
GenomeEncodedEntity reviewed +
Event reviewed +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Event structureModified +
Pathway structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
ChemicalDrug created 1
ReplacedResidue created 1
Anatomy created 1
Depolymerisation created 1
Drug created 1
DeletedControlledVocabulary created 1
InstanceEdit created 1
RNADrug created 1
FragmentDeletionModification created 1
ModifiedNucleotide created 1
Disease created 1
Polymer created 1
PathwayDiagram created 1
FragmentModification created 1
Pathway created 1
CellType created 1
MarkerReference created 1
Figure created 1
ProteinDrug created 1
Compartment created 1
NonsenseMutation created 1
CatalystActivity created 1
IntraChainCrosslinkedResidue created 1
StableIdentifier created 1
Complex created 1
Event created 1
ControlledVocabulary created 1
_DeletedInstance created 1
FragmentInsertionModification created 1
OtherEntity created 1
DatabaseObject created 1
PhysicalEntity created 1
Species created 1
ReferenceMolecule created 1
ReferenceTherapeutic created 1
Book created 1
ReferenceGeneProduct created 1
Summation created 1
StableIdentifierHistory created 1
TranscriptionalModification created 1
GO_BiologicalProcess created 1
GO_MolecularFunction created 1
RetractionStatus created 1
NegativeRegulation created 1
FunctionalStatusType created 1
FragmentReplacedModification created 1
DatabaseIdentifier created 1
EntitySet created 1
EntityFunctionalStatus created 1
ReferenceEntity created 1
FunctionalStatus created 1
FrontPage created 1
NegativeGeneExpressionRegulation created 1
DefinedSet created 1
_UpdateTracker created 1
ReferenceRNASequence created 1
_Release created 1
CrosslinkedResidue created 1
ReactionType created 1
GroupModifiedResidue created 1
Taxon created 1
NegativePrecedingEventReason created 1
ReactionlikeEvent created 1
EntityWithAccessionedSequence created 1
Affiliation created 1
ReferenceIsoform created 1
NegativePrecedingEvent created 1
CatalystActivityReference created 1
StableIdentifierReleaseStatus created 1
Requirement created 1
ReferenceGroup created 1
Regulation created 1
LiteratureReference created 1
URL created 1
PositiveGeneExpressionRegulation created 1
Cell created 1
TranslationalModification created 1
CellDevelopmentStep created 1
EvidenceType created 1
SequenceOntology created 1
GenomeEncodedEntity created 1
ReferenceDatabase created 1
ReferenceDNASequence created 1
GeneticallyModifiedResidue created 1
CandidateSet created 1
ModifiedResidue created 1
Polymerisation created 1
ExternalOntology created 1
InterChainCrosslinkedResidue created 1
FailedReaction created 1
_Deleted created 1
InteractionEvent created 1
Publication created 1
SimpleEntity created 1
PsiMod created 1
ControlReference created 1
PositiveRegulation created 1
RegulationReference created 1
Person created 1
CellLineagePath created 1
GO_CellularComponent created 1
DrugActionType created 1
AbstractModifiedResidue created 1
Reaction created 1
PhysicalEntityCellType created 1
ReviewStatus created 1
BlackBoxEvent created 1
ReferenceSequence created 1
_Deleted replacementInstances +
Taxon modified +
NegativePrecedingEventReason modified +
GroupModifiedResidue modified +
CrosslinkedResidue modified +
ReactionType modified +
_Release modified +
ReferenceRNASequence modified +
DefinedSet modified +
_UpdateTracker modified +
NegativeGeneExpressionRegulation modified +
FrontPage modified +
FunctionalStatus modified +
EntityFunctionalStatus modified +
ReferenceEntity modified +
EntitySet modified +
DatabaseIdentifier modified +
FragmentReplacedModification modified +
FunctionalStatusType modified +
NegativeRegulation modified +
RetractionStatus modified +
GO_BiologicalProcess modified +
GO_MolecularFunction modified +
TranscriptionalModification modified +
StableIdentifierHistory modified +
Summation modified +
ReferenceGeneProduct modified +
Book modified +
ReferenceTherapeutic modified +
Species modified +
ReferenceMolecule modified +
PhysicalEntity modified +
DatabaseObject modified +
OtherEntity modified +
FragmentInsertionModification modified +
_DeletedInstance modified +
ControlledVocabulary modified +
Event modified +
Complex modified +
StableIdentifier modified +
IntraChainCrosslinkedResidue modified +
CatalystActivity modified +
NonsenseMutation modified +
Compartment modified +
ProteinDrug modified +
Figure modified +
MarkerReference modified +
Pathway modified +
CellType modified +
FragmentModification modified +
PathwayDiagram modified +
Disease modified +
Polymer modified +
ModifiedNucleotide modified +
FragmentDeletionModification modified +
RNADrug modified +
DeletedControlledVocabulary modified +
InstanceEdit modified +
Drug modified +
Depolymerisation modified +
ReplacedResidue modified +
Anatomy modified +
ChemicalDrug modified +
ReferenceSequence modified +
BlackBoxEvent modified +
Reaction modified +
PhysicalEntityCellType modified +
ReviewStatus modified +
AbstractModifiedResidue modified +
DrugActionType modified +
GO_CellularComponent modified +
CellLineagePath modified +
Person modified +
RegulationReference modified +
PositiveRegulation modified +
PsiMod modified +
ControlReference modified +
InteractionEvent modified +
SimpleEntity modified +
Publication modified +
_Deleted modified +
FailedReaction modified +
InterChainCrosslinkedResidue modified +
Polymerisation modified +
ExternalOntology modified +
ModifiedResidue modified +
GeneticallyModifiedResidue modified +
CandidateSet modified +
ReferenceDatabase modified +
ReferenceDNASequence modified +
SequenceOntology modified +
GenomeEncodedEntity modified +
EvidenceType modified +
CellDevelopmentStep modified +
TranslationalModification modified +
Cell modified +
PositiveGeneExpressionRegulation modified +
LiteratureReference modified +
URL modified +
ReferenceGroup modified +
Regulation modified +
Requirement modified +
StableIdentifierReleaseStatus modified +
CatalystActivityReference modified +
NegativePrecedingEvent modified +
ReferenceIsoform modified +
Affiliation modified +
EntityWithAccessionedSequence modified +
ReactionlikeEvent modified +
Cell authored 1
EntitySet authored 1
ProteinDrug authored 1
CellDevelopmentStep authored +
CellLineagePath authored +
DefinedSet authored 1
Complex authored 1
Event authored +
GenomeEncodedEntity authored 1
Reaction authored +
BlackBoxEvent authored +
OtherEntity authored 1
PhysicalEntity authored 1
ChemicalDrug authored 1
CandidateSet authored 1
ReactionlikeEvent authored +
Depolymerisation authored +
EntityWithAccessionedSequence authored 1
Drug authored 1
RNADrug authored 1
Polymerisation authored +
Polymer authored 1
FailedReaction authored +
SimpleEntity authored 1
InteractionEvent authored +
Pathway authored +
GenomeEncodedEntity revised +
Event revised +
OtherEntity revised +
PhysicalEntity revised +
Reaction revised +
BlackBoxEvent revised +
ProteinDrug revised +
Cell revised +
EntitySet revised +
CellLineagePath revised +
DefinedSet revised +
Complex revised +
CellDevelopmentStep revised +
FailedReaction revised +
Polymer revised +
SimpleEntity revised +
InteractionEvent revised +
Pathway revised +
CandidateSet revised +
Depolymerisation revised +
ReactionlikeEvent revised +
ChemicalDrug revised +
RNADrug revised +
Polymerisation revised +
Drug revised +
EntityWithAccessionedSequence revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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