Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
PhysicalEntity authored 1
ReactionlikeEvent authored +
CellDevelopmentStep authored +
Depolymerisation authored +
OtherEntity authored 1
EntitySet authored 1
Complex authored 1
EntityWithAccessionedSequence authored 1
Drug authored 1
Polymerisation authored +
CellLineagePath authored +
Pathway authored +
RNADrug authored 1
ChemicalDrug authored 1
Reaction authored +
Polymer authored 1
GenomeEncodedEntity authored 1
FailedReaction authored +
CandidateSet authored 1
Event authored +
BlackBoxEvent authored +
SimpleEntity authored 1
Cell authored 1
DefinedSet authored 1
ProteinDrug authored 1
InteractionEvent authored +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
Pathway structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Event structureModified +
Pathway reviewed +
CellLineagePath reviewed +
EntityWithAccessionedSequence reviewed +
Drug reviewed +
Polymerisation reviewed +
EntitySet reviewed +
Complex reviewed +
Depolymerisation reviewed +
OtherEntity reviewed +
CellDevelopmentStep reviewed +
PhysicalEntity reviewed +
ReactionlikeEvent reviewed +
DefinedSet reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
CandidateSet reviewed +
SimpleEntity reviewed +
BlackBoxEvent reviewed +
Event reviewed +
Cell reviewed +
FailedReaction reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
ChemicalDrug reviewed +
Reaction reviewed +
RNADrug reviewed +
EntityWithAccessionedSequence edited +
Polymerisation edited +
Drug edited +
EntitySet edited +
Complex edited +
Pathway edited +
CellLineagePath edited +
PhysicalEntity edited +
ReactionlikeEvent edited +
Depolymerisation edited +
OtherEntity edited +
CellDevelopmentStep edited +
FailedReaction edited +
Polymer edited +
GenomeEncodedEntity edited +
DefinedSet edited +
InteractionEvent edited +
ProteinDrug edited +
CandidateSet edited +
BlackBoxEvent edited +
Event edited +
SimpleEntity edited +
Cell edited +
RNADrug edited +
ChemicalDrug edited +
Reaction edited +
_Deleted replacementInstances +
ReferenceDatabase modified +
OtherEntity modified +
NonsenseMutation modified +
InstanceEdit modified +
StableIdentifierReleaseStatus modified +
URL modified +
Book modified +
ReferenceRNASequence modified +
PathwayDiagram modified +
CellType modified +
CatalystActivityReference modified +
ModifiedResidue modified +
Drug modified +
_Deleted modified +
Publication modified +
NegativePrecedingEventReason modified +
ChemicalDrug modified +
Summation modified +
RNADrug modified +
Figure modified +
IntraChainCrosslinkedResidue modified +
InteractionEvent modified +
InterChainCrosslinkedResidue modified +
DefinedSet modified +
ExternalOntology modified +
GroupModifiedResidue modified +
Requirement modified +
FragmentInsertionModification modified +
NegativeGeneExpressionRegulation modified +
Compartment modified +
Depolymerisation modified +
FragmentReplacedModification modified +
ControlReference modified +
CellDevelopmentStep modified +
PhysicalEntity modified +
TranslationalModification modified +
CellLineagePath modified +
ReferenceGroup modified +
EntityFunctionalStatus modified +
_Release modified +
ReactionType modified +
Person modified +
Reaction modified +
ControlledVocabulary modified +
ReviewStatus modified +
_UpdateTracker modified +
_DeletedInstance modified +
CandidateSet modified +
ReferenceDNASequence modified +
NegativePrecedingEvent modified +
ReferenceEntity modified +
FragmentModification modified +
GenomeEncodedEntity modified +
Anatomy modified +
GO_BiologicalProcess modified +
DatabaseIdentifier modified +
ReactionlikeEvent modified +
Pathway modified +
GO_MolecularFunction modified +
Polymerisation modified +
EntityWithAccessionedSequence modified +
Taxon modified +
Complex modified +
EntitySet modified +
DrugActionType modified +
RegulationReference modified +
LiteratureReference modified +
CatalystActivity modified +
StableIdentifierHistory modified +
ReplacedResidue modified +
Affiliation modified +
FragmentDeletionModification modified +
StableIdentifier modified +
GeneticallyModifiedResidue modified +
PsiMod modified +
ProteinDrug modified +
Species modified +
ReferenceMolecule modified +
Cell modified +
FunctionalStatus modified +
GO_CellularComponent modified +
AbstractModifiedResidue modified +
ReferenceGeneProduct modified +
Polymer modified +
Regulation modified +
ReferenceSequence modified +
ReferenceIsoform modified +
RetractionStatus modified +
NegativeRegulation modified +
PositiveGeneExpressionRegulation modified +
FrontPage modified +
EvidenceType modified +
PositiveRegulation modified +
TranscriptionalModification modified +
SequenceOntology modified +
DeletedControlledVocabulary modified +
Disease modified +
FunctionalStatusType modified +
ModifiedNucleotide modified +
SimpleEntity modified +
BlackBoxEvent modified +
Event modified +
CrosslinkedResidue modified +
PhysicalEntityCellType modified +
FailedReaction modified +
DatabaseObject modified +
MarkerReference modified +
ReferenceTherapeutic modified +
ReactionlikeEvent revised +
PhysicalEntity revised +
OtherEntity revised +
Depolymerisation revised +
CellDevelopmentStep revised +
Drug revised +
Polymerisation revised +
EntityWithAccessionedSequence revised +
Complex revised +
EntitySet revised +
Pathway revised +
CellLineagePath revised +
RNADrug revised +
Reaction revised +
ChemicalDrug revised +
FailedReaction revised +
GenomeEncodedEntity revised +
Polymer revised +
ProteinDrug revised +
InteractionEvent revised +
DefinedSet revised +
Cell revised +
CandidateSet revised +
Event revised +
BlackBoxEvent revised +
SimpleEntity revised +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
CellType created 1
CatalystActivityReference created 1
ReferenceRNASequence created 1
PathwayDiagram created 1
ModifiedResidue created 1
Drug created 1
InstanceEdit created 1
OtherEntity created 1
ReferenceDatabase created 1
NonsenseMutation created 1
StableIdentifierReleaseStatus created 1
Book created 1
URL created 1
Requirement created 1
InteractionEvent created 1
IntraChainCrosslinkedResidue created 1
DefinedSet created 1
GroupModifiedResidue created 1
InterChainCrosslinkedResidue created 1
ExternalOntology created 1
FragmentInsertionModification created 1
Publication created 1
NegativePrecedingEventReason created 1
ChemicalDrug created 1
_Deleted created 1
RNADrug created 1
Figure created 1
Summation created 1
CellLineagePath created 1
TranslationalModification created 1
ReferenceGroup created 1
EntityFunctionalStatus created 1
FragmentReplacedModification created 1
ControlReference created 1
CellDevelopmentStep created 1
NegativeGeneExpressionRegulation created 1
Depolymerisation created 1
Compartment created 1
PhysicalEntity created 1
_DeletedInstance created 1
CandidateSet created 1
_UpdateTracker created 1
GenomeEncodedEntity created 1
FragmentModification created 1
Anatomy created 1
GO_BiologicalProcess created 1
ReferenceDNASequence created 1
ReferenceEntity created 1
NegativePrecedingEvent created 1
Person created 1
Reaction created 1
ReactionType created 1
_Release created 1
ReviewStatus created 1
ControlledVocabulary created 1
GO_MolecularFunction created 1
Pathway created 1
Taxon created 1
Complex created 1
DrugActionType created 1
RegulationReference created 1
EntitySet created 1
Polymerisation created 1
EntityWithAccessionedSequence created 1
ReactionlikeEvent created 1
DatabaseIdentifier created 1
Cell created 1
ProteinDrug created 1
Species created 1
ReferenceMolecule created 1
AbstractModifiedResidue created 1
ReferenceGeneProduct created 1
Polymer created 1
GO_CellularComponent created 1
FunctionalStatus created 1
StableIdentifierHistory created 1
Affiliation created 1
ReplacedResidue created 1
CatalystActivity created 1
StableIdentifier created 1
FragmentDeletionModification created 1
LiteratureReference created 1
PsiMod created 1
GeneticallyModifiedResidue created 1
RetractionStatus created 1
ReferenceIsoform created 1
FrontPage created 1
PositiveGeneExpressionRegulation created 1
NegativeRegulation created 1
Regulation created 1
ReferenceSequence created 1
ModifiedNucleotide created 1
FunctionalStatusType created 1
BlackBoxEvent created 1
Event created 1
SimpleEntity created 1
Disease created 1
DatabaseObject created 1
MarkerReference created 1
ReferenceTherapeutic created 1
PhysicalEntityCellType created 1
CrosslinkedResidue created 1
FailedReaction created 1
EvidenceType created 1
SequenceOntology created 1
DeletedControlledVocabulary created 1
PositiveRegulation created 1
TranscriptionalModification created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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