Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
GenomeEncodedEntity reviewed +
Depolymerisation reviewed +
OtherEntity reviewed +
FailedReaction reviewed +
Event reviewed +
Drug reviewed +
CellDevelopmentStep reviewed +
Complex reviewed +
Polymer reviewed +
SimpleEntity reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
RNADrug reviewed +
Pathway reviewed +
DefinedSet reviewed +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
ChemicalDrug reviewed +
PhysicalEntity reviewed +
Reaction reviewed +
ReactionlikeEvent reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
Cell reviewed +
ReactionlikeEvent structureModified +
Reaction structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
Event structureModified +
CandidateSet authored 1
Polymer authored 1
SimpleEntity authored 1
Complex authored 1
ProteinDrug authored 1
EntitySet authored 1
Polymerisation authored +
GenomeEncodedEntity authored 1
OtherEntity authored 1
Depolymerisation authored +
FailedReaction authored +
CellDevelopmentStep authored +
Event authored +
Drug authored 1
ChemicalDrug authored 1
PhysicalEntity authored 1
ReactionlikeEvent authored +
EntityWithAccessionedSequence authored 1
Reaction authored +
CellLineagePath authored +
Cell authored 1
RNADrug authored 1
Pathway authored +
InteractionEvent authored +
BlackBoxEvent authored +
DefinedSet authored 1
_Deleted replacementInstances +
PhysicalEntity modified +
ExternalOntology modified +
PsiMod modified +
Cell modified +
EntityFunctionalStatus modified +
StableIdentifierReleaseStatus modified +
ReferenceSequence modified +
GeneticallyModifiedResidue modified +
FunctionalStatusType modified +
Person modified +
LiteratureReference modified +
NegativeRegulation modified +
InteractionEvent modified +
ReferenceRNASequence modified +
ReferenceIsoform modified +
FragmentModification modified +
PathwayDiagram modified +
SimpleEntity modified +
ControlReference modified +
ReplacedResidue modified +
Disease modified +
ReferenceTherapeutic modified +
Publication modified +
ReactionType modified +
EntitySet modified +
PositiveGeneExpressionRegulation modified +
ProteinDrug modified +
PhysicalEntityCellType modified +
ModifiedResidue modified +
_Deleted modified +
FailedReaction modified +
DeletedControlledVocabulary modified +
CatalystActivity modified +
Drug modified +
SequenceOntology modified +
Requirement modified +
URL modified +
ReactionlikeEvent modified +
PositiveRegulation modified +
Summation modified +
DefinedSet modified +
Species modified +
Regulation modified +
CandidateSet modified +
FragmentReplacedModification modified +
ReferenceGeneProduct modified +
TranscriptionalModification modified +
FunctionalStatus modified +
ReviewStatus modified +
IntraChainCrosslinkedResidue modified +
NonsenseMutation modified +
NegativeGeneExpressionRegulation modified +
_Release modified +
CellDevelopmentStep modified +
StableIdentifier modified +
ReferenceGroup modified +
CellLineagePath modified +
CatalystActivityReference modified +
RNADrug modified +
CellType modified +
ReferenceMolecule modified +
AbstractModifiedResidue modified +
Compartment modified +
Figure modified +
Polymer modified +
Anatomy modified +
EvidenceType modified +
NegativePrecedingEventReason modified +
Polymerisation modified +
DrugActionType modified +
CrosslinkedResidue modified +
NegativePrecedingEvent modified +
TranslationalModification modified +
DatabaseIdentifier modified +
GroupModifiedResidue modified +
ModifiedNucleotide modified +
Book modified +
InstanceEdit modified +
GO_MolecularFunction modified +
RegulationReference modified +
GO_CellularComponent modified +
ChemicalDrug modified +
FragmentDeletionModification modified +
_DeletedInstance modified +
DatabaseObject modified +
RetractionStatus modified +
Reaction modified +
EntityWithAccessionedSequence modified +
Pathway modified +
MarkerReference modified +
BlackBoxEvent modified +
Complex modified +
ReferenceDNASequence modified +
GO_BiologicalProcess modified +
ReferenceEntity modified +
_UpdateTracker modified +
Taxon modified +
FrontPage modified +
ControlledVocabulary modified +
GenomeEncodedEntity modified +
FragmentInsertionModification modified +
ReferenceDatabase modified +
Depolymerisation modified +
StableIdentifierHistory modified +
OtherEntity modified +
Affiliation modified +
InterChainCrosslinkedResidue modified +
Event modified +
Polymerisation revised +
EntitySet revised +
ProteinDrug revised +
Complex revised +
SimpleEntity revised +
Polymer revised +
CandidateSet revised +
FailedReaction revised +
Event revised +
Drug revised +
CellDevelopmentStep revised +
GenomeEncodedEntity revised +
Depolymerisation revised +
OtherEntity revised +
Reaction revised +
ReactionlikeEvent revised +
EntityWithAccessionedSequence revised +
CellLineagePath revised +
Cell revised +
ChemicalDrug revised +
PhysicalEntity revised +
Pathway revised +
DefinedSet revised +
InteractionEvent revised +
BlackBoxEvent revised +
RNADrug revised +
FailedReaction created 1
DeletedControlledVocabulary created 1
SequenceOntology created 1
CatalystActivity created 1
Drug created 1
ModifiedResidue created 1
_Deleted created 1
ReactionType created 1
ReferenceTherapeutic created 1
Publication created 1
ProteinDrug created 1
PhysicalEntityCellType created 1
PositiveGeneExpressionRegulation created 1
EntitySet created 1
PathwayDiagram created 1
SimpleEntity created 1
Disease created 1
ReplacedResidue created 1
ControlReference created 1
InteractionEvent created 1
ReferenceRNASequence created 1
ReferenceIsoform created 1
FragmentModification created 1
NegativeRegulation created 1
Person created 1
FunctionalStatusType created 1
LiteratureReference created 1
PsiMod created 1
StableIdentifierReleaseStatus created 1
EntityFunctionalStatus created 1
GeneticallyModifiedResidue created 1
ReferenceSequence created 1
Cell created 1
ExternalOntology created 1
PhysicalEntity created 1
NonsenseMutation created 1
NegativeGeneExpressionRegulation created 1
CellDevelopmentStep created 1
StableIdentifier created 1
_Release created 1
FunctionalStatus created 1
TranscriptionalModification created 1
ReviewStatus created 1
IntraChainCrosslinkedResidue created 1
ReferenceGeneProduct created 1
CandidateSet created 1
Regulation created 1
FragmentReplacedModification created 1
Summation created 1
Species created 1
DefinedSet created 1
ReactionlikeEvent created 1
PositiveRegulation created 1
Requirement created 1
URL created 1
ModifiedNucleotide created 1
InstanceEdit created 1
Book created 1
NegativePrecedingEvent created 1
TranslationalModification created 1
DatabaseIdentifier created 1
GroupModifiedResidue created 1
CrosslinkedResidue created 1
DrugActionType created 1
Polymerisation created 1
Polymer created 1
Anatomy created 1
EvidenceType created 1
NegativePrecedingEventReason created 1
Figure created 1
CellType created 1
ReferenceMolecule created 1
AbstractModifiedResidue created 1
RNADrug created 1
Compartment created 1
ReferenceGroup created 1
CatalystActivityReference created 1
CellLineagePath created 1
InterChainCrosslinkedResidue created 1
Event created 1
FragmentInsertionModification created 1
GenomeEncodedEntity created 1
OtherEntity created 1
Affiliation created 1
ReferenceDatabase created 1
Depolymerisation created 1
StableIdentifierHistory created 1
Taxon created 1
ReferenceEntity created 1
_UpdateTracker created 1
ControlledVocabulary created 1
FrontPage created 1
Complex created 1
GO_BiologicalProcess created 1
ReferenceDNASequence created 1
MarkerReference created 1
Pathway created 1
BlackBoxEvent created 1
EntityWithAccessionedSequence created 1
Reaction created 1
ChemicalDrug created 1
GO_MolecularFunction created 1
RegulationReference created 1
GO_CellularComponent created 1
RetractionStatus created 1
DatabaseObject created 1
FragmentDeletionModification created 1
_DeletedInstance created 1
OtherEntity edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
CellDevelopmentStep edited +
Drug edited +
Event edited +
FailedReaction edited +
Polymer edited +
CandidateSet edited +
SimpleEntity edited +
Complex edited +
ProteinDrug edited +
EntitySet edited +
Polymerisation edited +
RNADrug edited +
BlackBoxEvent edited +
InteractionEvent edited +
DefinedSet edited +
Pathway edited +
PhysicalEntity edited +
ChemicalDrug edited +
Cell edited +
CellLineagePath edited +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
Reaction edited +
Depolymerisation internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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