Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellLineagePath edited +
OtherEntity edited +
Event edited +
EntityWithAccessionedSequence edited +
Cell edited +
GenomeEncodedEntity edited +
SimpleEntity edited +
Complex edited +
InteractionEvent edited +
EntitySet edited +
ReactionlikeEvent edited +
FailedReaction edited +
Drug edited +
Depolymerisation edited +
Pathway edited +
RNADrug edited +
BlackBoxEvent edited +
CandidateSet edited +
ChemicalDrug edited +
ProteinDrug edited +
DefinedSet edited +
Polymer edited +
CellDevelopmentStep edited +
PhysicalEntity edited +
Polymerisation edited +
Reaction edited +
CatalystActivity created 1
Affiliation created 1
CandidateSet created 1
BlackBoxEvent created 1
ControlledVocabulary created 1
PhysicalEntity created 1
DatabaseIdentifier created 1
Person created 1
GO_CellularComponent created 1
PhysicalEntityCellType created 1
NegativeRegulation created 1
ReferenceGroup created 1
CatalystActivityReference created 1
Disease created 1
Event created 1
SequenceOntology created 1
CellLineagePath created 1
ReferenceTherapeutic created 1
RNADrug created 1
Pathway created 1
LiteratureReference created 1
ReviewStatus created 1
ExternalOntology created 1
GroupModifiedResidue created 1
DatabaseObject created 1
ModifiedNucleotide created 1
GeneticallyModifiedResidue created 1
Drug created 1
EvidenceType created 1
_DeletedInstance created 1
FunctionalStatusType created 1
Complex created 1
DefinedSet created 1
ReferenceSequence created 1
ChemicalDrug created 1
StableIdentifierReleaseStatus created 1
InterChainCrosslinkedResidue created 1
Polymerisation created 1
PositiveGeneExpressionRegulation created 1
Anatomy created 1
NonsenseMutation created 1
PathwayDiagram created 1
ReplacedResidue created 1
Publication created 1
SimpleEntity created 1
Summation created 1
ModifiedResidue created 1
ReactionType created 1
EntityWithAccessionedSequence created 1
CellType created 1
InstanceEdit created 1
Taxon created 1
RegulationReference created 1
Figure created 1
FragmentModification created 1
FragmentReplacedModification created 1
Compartment created 1
ReactionlikeEvent created 1
InteractionEvent created 1
DeletedControlledVocabulary created 1
ControlReference created 1
ProteinDrug created 1
_Release created 1
TranscriptionalModification created 1
AbstractModifiedResidue created 1
Regulation created 1
Reaction created 1
RetractionStatus created 1
ReferenceEntity created 1
MarkerReference created 1
PositiveRegulation created 1
Book created 1
StableIdentifierHistory created 1
CrosslinkedResidue created 1
_Deleted created 1
Cell created 1
TranslationalModification created 1
GO_MolecularFunction created 1
NegativePrecedingEventReason created 1
Species created 1
DrugActionType created 1
ReferenceDatabase created 1
ReferenceIsoform created 1
ReferenceGeneProduct created 1
FailedReaction created 1
IntraChainCrosslinkedResidue created 1
StableIdentifier created 1
ReferenceRNASequence created 1
EntitySet created 1
FragmentDeletionModification created 1
FunctionalStatus created 1
NegativePrecedingEvent created 1
FrontPage created 1
URL created 1
_UpdateTracker created 1
ReferenceMolecule created 1
CellDevelopmentStep created 1
Polymer created 1
GenomeEncodedEntity created 1
OtherEntity created 1
PsiMod created 1
ReferenceDNASequence created 1
Depolymerisation created 1
NegativeGeneExpressionRegulation created 1
GO_BiologicalProcess created 1
FragmentInsertionModification created 1
EntityFunctionalStatus created 1
Requirement created 1
CellDevelopmentStep reviewed +
Reaction reviewed +
Polymerisation reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
DefinedSet reviewed +
ProteinDrug reviewed +
CandidateSet reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
Pathway reviewed +
RNADrug reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
InteractionEvent reviewed +
Complex reviewed +
Drug reviewed +
FailedReaction reviewed +
EntityWithAccessionedSequence reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
Cell reviewed +
OtherEntity reviewed +
CellLineagePath reviewed +
ProteinDrug revised +
DefinedSet revised +
ChemicalDrug revised +
BlackBoxEvent revised +
CandidateSet revised +
PhysicalEntity revised +
Polymerisation revised +
Reaction revised +
CellDevelopmentStep revised +
Polymer revised +
Cell revised +
SimpleEntity revised +
GenomeEncodedEntity revised +
EntityWithAccessionedSequence revised +
Event revised +
OtherEntity revised +
CellLineagePath revised +
RNADrug revised +
Pathway revised +
Depolymerisation revised +
Drug revised +
FailedReaction revised +
Complex revised +
InteractionEvent revised +
EntitySet revised +
ReactionlikeEvent revised +
NegativePrecedingEventReason modified +
GO_MolecularFunction modified +
Cell modified +
TranslationalModification modified +
_Deleted modified +
FragmentDeletionModification modified +
EntitySet modified +
StableIdentifier modified +
ReferenceRNASequence modified +
IntraChainCrosslinkedResidue modified +
FailedReaction modified +
ReferenceGeneProduct modified +
ReferenceIsoform modified +
DrugActionType modified +
ReferenceDatabase modified +
Species modified +
AbstractModifiedResidue modified +
TranscriptionalModification modified +
_Release modified +
ControlReference modified +
ProteinDrug modified +
DeletedControlledVocabulary modified +
CrosslinkedResidue modified +
StableIdentifierHistory modified +
Book modified +
ReferenceEntity modified +
MarkerReference modified +
PositiveRegulation modified +
RetractionStatus modified +
Reaction modified +
Regulation modified +
PsiMod modified +
OtherEntity modified +
GenomeEncodedEntity modified +
Requirement modified +
EntityFunctionalStatus modified +
FragmentInsertionModification modified +
GO_BiologicalProcess modified +
Depolymerisation modified +
NegativeGeneExpressionRegulation modified +
ReferenceDNASequence modified +
ReferenceMolecule modified +
URL modified +
_UpdateTracker modified +
NegativePrecedingEvent modified +
FrontPage modified +
FunctionalStatus modified +
Polymer modified +
CellDevelopmentStep modified +
CellLineagePath modified +
SequenceOntology modified +
Event modified +
Disease modified +
Complex modified +
FunctionalStatusType modified +
_DeletedInstance modified +
ModifiedNucleotide modified +
Drug modified +
GeneticallyModifiedResidue modified +
EvidenceType modified +
DatabaseObject modified +
GroupModifiedResidue modified +
ExternalOntology modified +
Pathway modified +
ReviewStatus modified +
LiteratureReference modified +
RNADrug modified +
ReferenceTherapeutic modified +
ControlledVocabulary modified +
CandidateSet modified +
BlackBoxEvent modified +
Affiliation modified +
CatalystActivity modified +
CatalystActivityReference modified +
PhysicalEntityCellType modified +
ReferenceGroup modified +
NegativeRegulation modified +
GO_CellularComponent modified +
Person modified +
DatabaseIdentifier modified +
PhysicalEntity modified +
FragmentModification modified +
Figure modified +
RegulationReference modified +
Taxon modified +
CellType modified +
InstanceEdit modified +
EntityWithAccessionedSequence modified +
ReactionType modified +
ModifiedResidue modified +
Summation modified +
SimpleEntity modified +
InteractionEvent modified +
ReactionlikeEvent modified +
Compartment modified +
FragmentReplacedModification modified +
InterChainCrosslinkedResidue modified +
StableIdentifierReleaseStatus modified +
ChemicalDrug modified +
ReferenceSequence modified +
DefinedSet modified +
ReplacedResidue modified +
Publication modified +
PathwayDiagram modified +
NonsenseMutation modified +
Anatomy modified +
PositiveGeneExpressionRegulation modified +
Polymerisation modified +
_Deleted replacementInstances +
Event structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
Reaction structureModified +
Pathway structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
CellLineagePath authored +
OtherEntity authored 1
Cell authored 1
SimpleEntity authored 1
GenomeEncodedEntity authored 1
Event authored +
EntityWithAccessionedSequence authored 1
Drug authored 1
FailedReaction authored +
InteractionEvent authored +
Complex authored 1
ReactionlikeEvent authored +
EntitySet authored 1
Pathway authored +
RNADrug authored 1
Depolymerisation authored +
BlackBoxEvent authored +
CandidateSet authored 1
ProteinDrug authored 1
DefinedSet authored 1
ChemicalDrug authored 1
Polymer authored 1
PhysicalEntity authored 1
Reaction authored +
Polymerisation authored +
CellDevelopmentStep authored +
Event internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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