Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Event structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
Pathway structureModified +
CellLineagePath structureModified +
OtherEntity created 1
ReferenceTherapeutic created 1
Event created 1
FragmentReplacedModification created 1
EntitySet created 1
Reaction created 1
ReferenceGroup created 1
Polymerisation created 1
EvidenceType created 1
PhysicalEntity created 1
Affiliation created 1
FrontPage created 1
Book created 1
CellDevelopmentStep created 1
ReferenceSequence created 1
Compartment created 1
CellLineagePath created 1
ProteinDrug created 1
_Deleted created 1
FragmentDeletionModification created 1
ChemicalDrug created 1
ModifiedResidue created 1
NegativePrecedingEvent created 1
Depolymerisation created 1
Requirement created 1
GO_BiologicalProcess created 1
NonsenseMutation created 1
Regulation created 1
ReactionType created 1
Polymer created 1
ReferenceGeneProduct created 1
FunctionalStatusType created 1
InteractionEvent created 1
MarkerReference created 1
PsiMod created 1
ReferenceDatabase created 1
RetractionStatus created 1
ReferenceIsoform created 1
ReferenceRNASequence created 1
SequenceOntology created 1
ReplacedResidue created 1
Pathway created 1
TranscriptionalModification created 1
PhysicalEntityCellType created 1
LiteratureReference created 1
ExternalOntology created 1
Disease created 1
Complex created 1
CatalystActivity created 1
ReferenceDNASequence created 1
RegulationReference created 1
ReferenceEntity created 1
Cell created 1
DefinedSet created 1
GroupModifiedResidue created 1
_Release created 1
EntityFunctionalStatus created 1
Drug created 1
CatalystActivityReference created 1
CrosslinkedResidue created 1
Summation created 1
AbstractModifiedResidue created 1
PositiveRegulation created 1
IntraChainCrosslinkedResidue created 1
NegativeGeneExpressionRegulation created 1
Taxon created 1
TranslationalModification created 1
Person created 1
GO_MolecularFunction created 1
DeletedControlledVocabulary created 1
Figure created 1
Anatomy created 1
FunctionalStatus created 1
Publication created 1
PathwayDiagram created 1
DatabaseObject created 1
StableIdentifierReleaseStatus created 1
StableIdentifierHistory created 1
SimpleEntity created 1
FragmentModification created 1
InterChainCrosslinkedResidue created 1
_UpdateTracker created 1
EntityWithAccessionedSequence created 1
FailedReaction created 1
ReactionlikeEvent created 1
PositiveGeneExpressionRegulation created 1
Species created 1
ModifiedNucleotide created 1
ReviewStatus created 1
BlackBoxEvent created 1
ReferenceMolecule created 1
ControlledVocabulary created 1
FragmentInsertionModification created 1
NegativeRegulation created 1
DrugActionType created 1
StableIdentifier created 1
_DeletedInstance created 1
CellType created 1
DatabaseIdentifier created 1
GenomeEncodedEntity created 1
CandidateSet created 1
InstanceEdit created 1
GeneticallyModifiedResidue created 1
GO_CellularComponent created 1
ControlReference created 1
NegativePrecedingEventReason created 1
URL created 1
RNADrug created 1
CellDevelopmentStep revised +
GenomeEncodedEntity revised +
Drug revised +
CandidateSet revised +
CellLineagePath revised +
Pathway revised +
RNADrug revised +
EntitySet revised +
Depolymerisation revised +
FailedReaction revised +
Complex revised +
ChemicalDrug revised +
EntityWithAccessionedSequence revised +
SimpleEntity revised +
ProteinDrug revised +
Event revised +
OtherEntity revised +
InteractionEvent revised +
DefinedSet revised +
PhysicalEntity revised +
Polymerisation revised +
Polymer revised +
BlackBoxEvent revised +
Cell revised +
Reaction revised +
ReactionlikeEvent revised +
Polymer edited +
BlackBoxEvent edited +
Polymerisation edited +
DefinedSet edited +
InteractionEvent edited +
PhysicalEntity edited +
ReactionlikeEvent edited +
Reaction edited +
Cell edited +
ChemicalDrug edited +
Complex edited +
FailedReaction edited +
Depolymerisation edited +
EntitySet edited +
OtherEntity edited +
SimpleEntity edited +
ProteinDrug edited +
Event edited +
EntityWithAccessionedSequence edited +
RNADrug edited +
Pathway edited +
CellLineagePath edited +
GenomeEncodedEntity edited +
Drug edited +
CandidateSet edited +
CellDevelopmentStep edited +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
_Deleted replacementInstances +
EntitySet authored 1
Depolymerisation authored +
FailedReaction authored +
ChemicalDrug authored 1
Complex authored 1
EntityWithAccessionedSequence authored 1
ProteinDrug authored 1
SimpleEntity authored 1
Event authored +
OtherEntity authored 1
DefinedSet authored 1
InteractionEvent authored +
PhysicalEntity authored 1
Polymerisation authored +
Polymer authored 1
BlackBoxEvent authored +
Cell authored 1
Reaction authored +
ReactionlikeEvent authored +
CellDevelopmentStep authored +
GenomeEncodedEntity authored 1
CandidateSet authored 1
Drug authored 1
CellLineagePath authored +
RNADrug authored 1
Pathway authored +
ReferenceIsoform modified +
ReferenceDatabase modified +
RetractionStatus modified +
MarkerReference modified +
PsiMod modified +
TranscriptionalModification modified +
Pathway modified +
ReplacedResidue modified +
ReferenceRNASequence modified +
SequenceOntology modified +
Requirement modified +
Depolymerisation modified +
GO_BiologicalProcess modified +
NegativePrecedingEvent modified +
ModifiedResidue modified +
FragmentDeletionModification modified +
ChemicalDrug modified +
_Deleted modified +
ProteinDrug modified +
InteractionEvent modified +
FunctionalStatusType modified +
ReferenceGeneProduct modified +
Polymer modified +
ReactionType modified +
Regulation modified +
NonsenseMutation modified +
CellDevelopmentStep modified +
Book modified +
FrontPage modified +
Affiliation modified +
CellLineagePath modified +
ReferenceSequence modified +
Compartment modified +
EntitySet modified +
FragmentReplacedModification modified +
Event modified +
ReferenceTherapeutic modified +
OtherEntity modified +
EvidenceType modified +
PhysicalEntity modified +
ReferenceGroup modified +
Polymerisation modified +
Reaction modified +
ControlReference modified +
GO_CellularComponent modified +
InstanceEdit modified +
GeneticallyModifiedResidue modified +
DatabaseIdentifier modified +
GenomeEncodedEntity modified +
CandidateSet modified +
CellType modified +
RNADrug modified +
URL modified +
NegativePrecedingEventReason modified +
FailedReaction modified +
EntityWithAccessionedSequence modified +
SimpleEntity modified +
InterChainCrosslinkedResidue modified +
FragmentModification modified +
_UpdateTracker modified +
StableIdentifierHistory modified +
StableIdentifierReleaseStatus modified +
_DeletedInstance modified +
StableIdentifier modified +
DrugActionType modified +
NegativeRegulation modified +
ReferenceMolecule modified +
ControlledVocabulary modified +
FragmentInsertionModification modified +
BlackBoxEvent modified +
ModifiedNucleotide modified +
ReviewStatus modified +
Species modified +
PositiveGeneExpressionRegulation modified +
ReactionlikeEvent modified +
IntraChainCrosslinkedResidue modified +
NegativeGeneExpressionRegulation modified +
AbstractModifiedResidue modified +
PositiveRegulation modified +
Summation modified +
CrosslinkedResidue modified +
EntityFunctionalStatus modified +
Drug modified +
CatalystActivityReference modified +
PathwayDiagram modified +
Publication modified +
DatabaseObject modified +
FunctionalStatus modified +
Anatomy modified +
Figure modified +
DeletedControlledVocabulary modified +
Taxon modified +
TranslationalModification modified +
GO_MolecularFunction modified +
Person modified +
ReferenceDNASequence modified +
CatalystActivity modified +
Complex modified +
Disease modified +
ExternalOntology modified +
LiteratureReference modified +
PhysicalEntityCellType modified +
DefinedSet modified +
GroupModifiedResidue modified +
_Release modified +
Cell modified +
RegulationReference modified +
ReferenceEntity modified +
CellLineagePath reviewed +
Pathway reviewed +
RNADrug reviewed +
CellDevelopmentStep reviewed +
GenomeEncodedEntity reviewed +
Drug reviewed +
CandidateSet reviewed +
PhysicalEntity reviewed +
DefinedSet reviewed +
InteractionEvent reviewed +
Polymerisation reviewed +
Polymer reviewed +
BlackBoxEvent reviewed +
Cell reviewed +
Reaction reviewed +
ReactionlikeEvent reviewed +
EntitySet reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
Complex reviewed +
EntityWithAccessionedSequence reviewed +
SimpleEntity reviewed +
ProteinDrug reviewed +
Event reviewed +
OtherEntity reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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