Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
RNADrug authored 1
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
FailedReaction authored +
ReactionlikeEvent authored +
Cell authored 1
BlackBoxEvent authored +
Reaction authored +
Polymer authored 1
Event authored +
CellLineagePath authored +
Pathway authored +
ProteinDrug authored 1
ChemicalDrug authored 1
Drug authored 1
OtherEntity authored 1
Complex authored 1
InteractionEvent authored +
CellDevelopmentStep authored +
DefinedSet authored 1
EntitySet authored 1
Depolymerisation authored +
Polymerisation authored +
SimpleEntity authored 1
CandidateSet authored 1
GenomeEncodedEntity authored 1
ReplacedResidue modified +
PsiMod modified +
CellDevelopmentStep modified +
RetractionStatus modified +
FrontPage modified +
ReferenceGeneProduct modified +
EntityFunctionalStatus modified +
DeletedControlledVocabulary modified +
NegativePrecedingEventReason modified +
Species modified +
_DeletedInstance modified +
Complex modified +
InteractionEvent modified +
ModifiedResidue modified +
Regulation modified +
Taxon modified +
RegulationReference modified +
GeneticallyModifiedResidue modified +
EntityWithAccessionedSequence modified +
Book modified +
GO_CellularComponent modified +
ReferenceGroup modified +
Compartment modified +
ReferenceSequence modified +
Reaction modified +
ReviewStatus modified +
FragmentReplacedModification modified +
Figure modified +
ControlledVocabulary modified +
Affiliation modified +
GenomeEncodedEntity modified +
InstanceEdit modified +
CandidateSet modified +
ReferenceTherapeutic modified +
ModifiedNucleotide modified +
SimpleEntity modified +
Anatomy modified +
URL modified +
DrugActionType modified +
_Release modified +
CatalystActivity modified +
ProteinDrug modified +
TranslationalModification modified +
Polymer modified +
InterChainCrosslinkedResidue modified +
ChemicalDrug modified +
IntraChainCrosslinkedResidue modified +
FunctionalStatusType modified +
Drug modified +
ReferenceRNASequence modified +
SequenceOntology modified +
TranscriptionalModification modified +
AbstractModifiedResidue modified +
EvidenceType modified +
FunctionalStatus modified +
ControlReference modified +
ReferenceDatabase modified +
BlackBoxEvent modified +
EntitySet modified +
DefinedSet modified +
CellType modified +
PositiveRegulation modified +
Disease modified +
GroupModifiedResidue modified +
OtherEntity modified +
CrosslinkedResidue modified +
PositiveGeneExpressionRegulation modified +
NegativeRegulation modified +
FragmentInsertionModification modified +
Person modified +
MarkerReference modified +
PathwayDiagram modified +
Pathway modified +
DatabaseIdentifier modified +
Event modified +
CatalystActivityReference modified +
PhysicalEntity modified +
RNADrug modified +
GO_BiologicalProcess modified +
StableIdentifier modified +
Cell modified +
Requirement modified +
ReferenceDNASequence modified +
FragmentModification modified +
DatabaseObject modified +
Depolymerisation modified +
NegativeGeneExpressionRegulation modified +
ExternalOntology modified +
Polymerisation modified +
FragmentDeletionModification modified +
StableIdentifierHistory modified +
Summation modified +
_UpdateTracker modified +
NonsenseMutation modified +
StableIdentifierReleaseStatus modified +
ReactionType modified +
ReferenceMolecule modified +
ReferenceIsoform modified +
NegativePrecedingEvent modified +
_Deleted modified +
Publication modified +
CellLineagePath modified +
LiteratureReference modified +
ReferenceEntity modified +
FailedReaction modified +
GO_MolecularFunction modified +
ReactionlikeEvent modified +
PhysicalEntityCellType modified +
ReactionlikeEvent reviewed +
Cell reviewed +
BlackBoxEvent reviewed +
Reaction reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
EntityWithAccessionedSequence reviewed +
Drug reviewed +
ChemicalDrug reviewed +
Event reviewed +
Polymer reviewed +
CellLineagePath reviewed +
ProteinDrug reviewed +
Pathway reviewed +
Complex reviewed +
InteractionEvent reviewed +
OtherEntity reviewed +
Polymerisation reviewed +
SimpleEntity reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
CellDevelopmentStep reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
EntitySet reviewed +
Polymerisation structureModified +
CellLineagePath structureModified +
Event structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Reaction structureModified +
FailedReaction structureModified +
GenomeEncodedEntity created 1
ReferenceTherapeutic created 1
CandidateSet created 1
InstanceEdit created 1
ModifiedNucleotide created 1
SimpleEntity created 1
Affiliation created 1
FragmentReplacedModification created 1
Figure created 1
ControlledVocabulary created 1
DrugActionType created 1
URL created 1
Anatomy created 1
TranscriptionalModification created 1
Drug created 1
IntraChainCrosslinkedResidue created 1
FunctionalStatusType created 1
ChemicalDrug created 1
ReferenceRNASequence created 1
SequenceOntology created 1
Polymer created 1
InterChainCrosslinkedResidue created 1
_Release created 1
CatalystActivity created 1
TranslationalModification created 1
ProteinDrug created 1
FunctionalStatus created 1
ControlReference created 1
BlackBoxEvent created 1
ReferenceDatabase created 1
AbstractModifiedResidue created 1
EvidenceType created 1
ReferenceGeneProduct created 1
FrontPage created 1
EntityFunctionalStatus created 1
RetractionStatus created 1
ReplacedResidue created 1
PsiMod created 1
CellDevelopmentStep created 1
ModifiedResidue created 1
_DeletedInstance created 1
Species created 1
InteractionEvent created 1
Complex created 1
NegativePrecedingEventReason created 1
DeletedControlledVocabulary created 1
GeneticallyModifiedResidue created 1
RegulationReference created 1
Regulation created 1
Taxon created 1
ReviewStatus created 1
ReferenceSequence created 1
Reaction created 1
GO_CellularComponent created 1
Compartment created 1
ReferenceGroup created 1
EntityWithAccessionedSequence created 1
Book created 1
ExternalOntology created 1
Polymerisation created 1
NegativeGeneExpressionRegulation created 1
DatabaseObject created 1
Depolymerisation created 1
ReactionType created 1
ReferenceIsoform created 1
ReferenceMolecule created 1
_UpdateTracker created 1
NonsenseMutation created 1
StableIdentifierReleaseStatus created 1
FragmentDeletionModification created 1
StableIdentifierHistory created 1
Summation created 1
NegativePrecedingEvent created 1
LiteratureReference created 1
_Deleted created 1
CellLineagePath created 1
Publication created 1
ReactionlikeEvent created 1
PhysicalEntityCellType created 1
GO_MolecularFunction created 1
ReferenceEntity created 1
FailedReaction created 1
Disease created 1
CellType created 1
PositiveRegulation created 1
EntitySet created 1
DefinedSet created 1
PathwayDiagram created 1
MarkerReference created 1
Person created 1
OtherEntity created 1
PositiveGeneExpressionRegulation created 1
GroupModifiedResidue created 1
CrosslinkedResidue created 1
FragmentInsertionModification created 1
NegativeRegulation created 1
CatalystActivityReference created 1
DatabaseIdentifier created 1
Event created 1
Pathway created 1
Requirement created 1
ReferenceDNASequence created 1
FragmentModification created 1
GO_BiologicalProcess created 1
Cell created 1
StableIdentifier created 1
RNADrug created 1
PhysicalEntity created 1
ReactionlikeEvent revised +
Reaction revised +
Cell revised +
BlackBoxEvent revised +
RNADrug revised +
FailedReaction revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
Drug revised +
ChemicalDrug revised +
Event revised +
Polymer revised +
CellLineagePath revised +
Pathway revised +
ProteinDrug revised +
InteractionEvent revised +
Complex revised +
OtherEntity revised +
Polymerisation revised +
CandidateSet revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
Depolymerisation revised +
EntitySet revised +
CellDevelopmentStep revised +
DefinedSet revised +
OtherEntity edited +
Complex edited +
InteractionEvent edited +
DefinedSet edited +
CellDevelopmentStep edited +
EntitySet edited +
Depolymerisation edited +
SimpleEntity edited +
GenomeEncodedEntity edited +
CandidateSet edited +
Polymerisation edited +
PhysicalEntity edited +
FailedReaction edited +
EntityWithAccessionedSequence edited +
RNADrug edited +
Reaction edited +
Cell edited +
BlackBoxEvent edited +
ReactionlikeEvent edited +
ProteinDrug edited +
Pathway edited +
CellLineagePath edited +
Event edited +
Polymer edited +
Drug edited +
ChemicalDrug edited +
CellLineagePath internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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