Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Species created 1
PhysicalEntity created 1
NonsenseMutation created 1
ModifiedNucleotide created 1
AbstractModifiedResidue created 1
DatabaseIdentifier created 1
_DeletedInstance created 1
StableIdentifierReleaseStatus created 1
GroupModifiedResidue created 1
RegulationReference created 1
PositiveGeneExpressionRegulation created 1
ModifiedResidue created 1
ReferenceTherapeutic created 1
DrugActionType created 1
Reaction created 1
PsiMod created 1
ReferenceGeneProduct created 1
InterChainCrosslinkedResidue created 1
InstanceEdit created 1
Event created 1
ChemicalDrug created 1
URL created 1
Taxon created 1
EvidenceType created 1
RetractionStatus created 1
PhysicalEntityCellType created 1
CellType created 1
NegativeGeneExpressionRegulation created 1
TranscriptionalModification created 1
Regulation created 1
Affiliation created 1
OtherEntity created 1
Drug created 1
FunctionalStatusType created 1
CrosslinkedResidue created 1
Compartment created 1
FragmentReplacedModification created 1
_Release created 1
FragmentInsertionModification created 1
ProteinDrug created 1
IntraChainCrosslinkedResidue created 1
GO_BiologicalProcess created 1
EntitySet created 1
Figure created 1
SequenceOntology created 1
EntityWithAccessionedSequence created 1
CatalystActivity created 1
Polymer created 1
ReactionlikeEvent created 1
ReferenceDNASequence created 1
Complex created 1
StableIdentifierHistory created 1
ReactionType created 1
NegativeRegulation created 1
Depolymerisation created 1
GenomeEncodedEntity created 1
Anatomy created 1
SimpleEntity created 1
FunctionalStatus created 1
DefinedSet created 1
CatalystActivityReference created 1
Disease created 1
ReferenceRNASequence created 1
RNADrug created 1
StableIdentifier created 1
GO_MolecularFunction created 1
FrontPage created 1
Pathway created 1
DatabaseObject created 1
ControlledVocabulary created 1
CellLineagePath created 1
DeletedControlledVocabulary created 1
ReferenceSequence created 1
ExternalOntology created 1
_Deleted created 1
Publication created 1
PathwayDiagram created 1
FailedReaction created 1
ControlReference created 1
FragmentDeletionModification created 1
ReferenceEntity created 1
ReferenceIsoform created 1
GeneticallyModifiedResidue created 1
ReferenceGroup created 1
ReplacedResidue created 1
TranslationalModification created 1
Cell created 1
CandidateSet created 1
ReferenceMolecule created 1
InteractionEvent created 1
_UpdateTracker created 1
FragmentModification created 1
ReferenceDatabase created 1
Book created 1
CellDevelopmentStep created 1
PositiveRegulation created 1
EntityFunctionalStatus created 1
NegativePrecedingEventReason created 1
ReviewStatus created 1
Summation created 1
Person created 1
BlackBoxEvent created 1
NegativePrecedingEvent created 1
Requirement created 1
LiteratureReference created 1
MarkerReference created 1
Polymerisation created 1
GO_CellularComponent created 1
CellDevelopmentStep internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
EntitySet modified +
GO_BiologicalProcess modified +
Polymer modified +
CatalystActivity modified +
Figure modified +
SequenceOntology modified +
EntityWithAccessionedSequence modified +
StableIdentifierHistory modified +
Complex modified +
ReferenceDNASequence modified +
ReactionlikeEvent modified +
Anatomy modified +
Depolymerisation modified +
NegativeRegulation modified +
GenomeEncodedEntity modified +
ReactionType modified +
Drug modified +
OtherEntity modified +
_Release modified +
FragmentReplacedModification modified +
Compartment modified +
CrosslinkedResidue modified +
FunctionalStatusType modified +
FragmentInsertionModification modified +
IntraChainCrosslinkedResidue modified +
ProteinDrug modified +
ChemicalDrug modified +
Event modified +
URL modified +
Taxon modified +
PhysicalEntityCellType modified +
RetractionStatus modified +
EvidenceType modified +
TranscriptionalModification modified +
CellType modified +
NegativeGeneExpressionRegulation modified +
Affiliation modified +
Regulation modified +
ModifiedNucleotide modified +
NonsenseMutation modified +
PhysicalEntity modified +
Species modified +
PositiveGeneExpressionRegulation modified +
GroupModifiedResidue modified +
RegulationReference modified +
_DeletedInstance modified +
StableIdentifierReleaseStatus modified +
AbstractModifiedResidue modified +
DatabaseIdentifier modified +
Reaction modified +
DrugActionType modified +
ReferenceTherapeutic modified +
ModifiedResidue modified +
InstanceEdit modified +
InterChainCrosslinkedResidue modified +
ReferenceGeneProduct modified +
PsiMod modified +
NegativePrecedingEventReason modified +
CellDevelopmentStep modified +
EntityFunctionalStatus modified +
PositiveRegulation modified +
Book modified +
ReferenceDatabase modified +
FragmentModification modified +
BlackBoxEvent modified +
Person modified +
Summation modified +
ReviewStatus modified +
MarkerReference modified +
Requirement modified +
LiteratureReference modified +
NegativePrecedingEvent modified +
GO_CellularComponent modified +
Polymerisation modified +
GeneticallyModifiedResidue modified +
ReferenceIsoform modified +
ReferenceEntity modified +
FragmentDeletionModification modified +
ReferenceGroup modified +
ReplacedResidue modified +
CandidateSet modified +
TranslationalModification modified +
Cell modified +
_UpdateTracker modified +
InteractionEvent modified +
ReferenceMolecule modified +
CellLineagePath modified +
ReferenceSequence modified +
DeletedControlledVocabulary modified +
PathwayDiagram modified +
_Deleted modified +
Publication modified +
ExternalOntology modified +
ControlReference modified +
FailedReaction modified +
FunctionalStatus modified +
DefinedSet modified +
SimpleEntity modified +
ReferenceRNASequence modified +
Disease modified +
CatalystActivityReference modified +
Pathway modified +
GO_MolecularFunction modified +
FrontPage modified +
StableIdentifier modified +
RNADrug modified +
ControlledVocabulary modified +
DatabaseObject modified +
Complex revised +
ReactionlikeEvent revised +
FailedReaction revised +
Polymerisation revised +
GenomeEncodedEntity revised +
Depolymerisation revised +
CellLineagePath revised +
EntitySet revised +
ChemicalDrug revised +
CellDevelopmentStep revised +
Event revised +
EntityWithAccessionedSequence revised +
Polymer revised +
BlackBoxEvent revised +
RNADrug revised +
Cell revised +
Pathway revised +
CandidateSet revised +
Reaction revised +
InteractionEvent revised +
ProteinDrug revised +
Drug revised +
SimpleEntity revised +
OtherEntity revised +
DefinedSet revised +
PhysicalEntity revised +
EntityWithAccessionedSequence edited +
Polymer edited +
BlackBoxEvent edited +
ChemicalDrug edited +
CellDevelopmentStep edited +
Event edited +
CellLineagePath edited +
EntitySet edited +
FailedReaction edited +
Depolymerisation edited +
Polymerisation edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
Complex edited +
SimpleEntity edited +
Drug edited +
OtherEntity edited +
PhysicalEntity edited +
DefinedSet edited +
ProteinDrug edited +
InteractionEvent edited +
Cell edited +
RNADrug edited +
CandidateSet edited +
Pathway edited +
Reaction edited +
_Deleted replacementInstances +
ReactionlikeEvent reviewed +
Complex reviewed +
FailedReaction reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
Depolymerisation reviewed +
ChemicalDrug reviewed +
CellDevelopmentStep reviewed +
Event reviewed +
CellLineagePath reviewed +
EntitySet reviewed +
EntityWithAccessionedSequence reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
Cell reviewed +
RNADrug reviewed +
Pathway reviewed +
CandidateSet reviewed +
Reaction reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
SimpleEntity reviewed +
OtherEntity reviewed +
Drug reviewed +
PhysicalEntity reviewed +
DefinedSet reviewed +
CellDevelopmentStep structureModified +
Event structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Pathway structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
RNADrug authored 1
Cell authored 1
CandidateSet authored 1
Reaction authored +
Pathway authored +
InteractionEvent authored +
ProteinDrug authored 1
OtherEntity authored 1
SimpleEntity authored 1
Drug authored 1
DefinedSet authored 1
PhysicalEntity authored 1
Complex authored 1
ReactionlikeEvent authored +
FailedReaction authored +
Depolymerisation authored +
Polymerisation authored +
GenomeEncodedEntity authored 1
EntitySet authored 1
CellLineagePath authored +
CellDevelopmentStep authored +
Event authored +
ChemicalDrug authored 1
EntityWithAccessionedSequence authored 1
Polymer authored 1
BlackBoxEvent authored +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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