Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
Event revised +
CellLineagePath revised +
RNADrug revised +
BlackBoxEvent revised +
ReactionlikeEvent revised +
FailedReaction revised +
Polymer revised +
Reaction revised +
Complex revised +
EntitySet revised +
CandidateSet revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
SimpleEntity revised +
ChemicalDrug revised +
OtherEntity revised +
Drug revised +
PhysicalEntity revised +
GenomeEncodedEntity revised +
Depolymerisation revised +
Pathway revised +
ProteinDrug revised +
Cell revised +
CellDevelopmentStep revised +
Polymerisation revised +
DefinedSet revised +
Depolymerisation reviewed +
GenomeEncodedEntity reviewed +
PhysicalEntity reviewed +
Drug reviewed +
DefinedSet reviewed +
Polymerisation reviewed +
CellDevelopmentStep reviewed +
Pathway reviewed +
ProteinDrug reviewed +
Cell reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
InteractionEvent reviewed +
CandidateSet reviewed +
OtherEntity reviewed +
ChemicalDrug reviewed +
Reaction reviewed +
Polymer reviewed +
FailedReaction reviewed +
EntitySet reviewed +
Complex reviewed +
CellLineagePath reviewed +
Event reviewed +
RNADrug reviewed +
ReactionlikeEvent reviewed +
BlackBoxEvent reviewed +
Event edited +
CellLineagePath edited +
RNADrug edited +
BlackBoxEvent edited +
ReactionlikeEvent edited +
FailedReaction edited +
Polymer edited +
Reaction edited +
Complex edited +
EntitySet edited +
CandidateSet edited +
InteractionEvent edited +
EntityWithAccessionedSequence edited +
SimpleEntity edited +
ChemicalDrug edited +
OtherEntity edited +
Drug edited +
PhysicalEntity edited +
GenomeEncodedEntity edited +
Depolymerisation edited +
ProteinDrug edited +
Pathway edited +
Cell edited +
CellDevelopmentStep edited +
Polymerisation edited +
DefinedSet edited +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
ModifiedNucleotide modified +
Polymer modified +
ReviewStatus modified +
_Deleted modified +
Regulation modified +
RNADrug modified +
ControlledVocabulary modified +
ReferenceTherapeutic modified +
ReferenceGeneProduct modified +
GeneticallyModifiedResidue modified +
CellDevelopmentStep modified +
PathwayDiagram modified +
GO_BiologicalProcess modified +
Person modified +
GroupModifiedResidue modified +
DefinedSet modified +
EntityWithAccessionedSequence modified +
Affiliation modified +
NegativeGeneExpressionRegulation modified +
CrosslinkedResidue modified +
InstanceEdit modified +
Publication modified +
DatabaseObject modified +
ReferenceDatabase modified +
InterChainCrosslinkedResidue modified +
FunctionalStatus modified +
TranscriptionalModification modified +
Disease modified +
PsiMod modified +
StableIdentifierReleaseStatus modified +
BlackBoxEvent modified +
CellType modified +
ReferenceGroup modified +
Anatomy modified +
StableIdentifierHistory modified +
DrugActionType modified +
SequenceOntology modified +
LiteratureReference modified +
EvidenceType modified +
_UpdateTracker modified +
GenomeEncodedEntity modified +
FragmentInsertionModification modified +
Polymerisation modified +
FunctionalStatusType modified +
Species modified +
SimpleEntity modified +
Summation modified +
StableIdentifier modified +
Requirement modified +
NegativeRegulation modified +
IntraChainCrosslinkedResidue modified +
FailedReaction modified +
PhysicalEntityCellType modified +
_Release modified +
Reaction modified +
MarkerReference modified +
Taxon modified +
FragmentReplacedModification modified +
PositiveRegulation modified +
ReactionType modified +
ReactionlikeEvent modified +
TranslationalModification modified +
ReferenceEntity modified +
ModifiedResidue modified +
Drug modified +
ReferenceDNASequence modified +
PhysicalEntity modified +
Depolymerisation modified +
ReplacedResidue modified +
Book modified +
Pathway modified +
ProteinDrug modified +
Cell modified +
Compartment modified +
EntityFunctionalStatus modified +
Figure modified +
ReferenceSequence modified +
InteractionEvent modified +
ExternalOntology modified +
GO_CellularComponent modified +
ChemicalDrug modified +
OtherEntity modified +
DeletedControlledVocabulary modified +
RegulationReference modified +
ReferenceMolecule modified +
RetractionStatus modified +
FragmentDeletionModification modified +
FragmentModification modified +
EntitySet modified +
Complex modified +
NonsenseMutation modified +
CatalystActivity modified +
ReferenceRNASequence modified +
CellLineagePath modified +
Event modified +
URL modified +
NegativePrecedingEvent modified +
ReferenceIsoform modified +
GO_MolecularFunction modified +
_DeletedInstance modified +
CatalystActivityReference modified +
PositiveGeneExpressionRegulation modified +
DatabaseIdentifier modified +
CandidateSet modified +
FrontPage modified +
NegativePrecedingEventReason modified +
AbstractModifiedResidue modified +
ControlReference modified +
Reaction authored +
Polymer authored 1
FailedReaction authored +
Complex authored 1
EntitySet authored 1
CellLineagePath authored +
Event authored +
RNADrug authored 1
ReactionlikeEvent authored +
BlackBoxEvent authored +
Depolymerisation authored +
GenomeEncodedEntity authored 1
PhysicalEntity authored 1
Drug authored 1
DefinedSet authored 1
Polymerisation authored +
Pathway authored +
Cell authored 1
ProteinDrug authored 1
CellDevelopmentStep authored +
SimpleEntity authored 1
InteractionEvent authored +
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
OtherEntity authored 1
ChemicalDrug authored 1
Depolymerisation structureModified +
Reaction structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
InteractionEvent structureModified +
Event structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
PsiMod created 1
TranscriptionalModification created 1
Disease created 1
ReferenceGroup created 1
Anatomy created 1
StableIdentifierReleaseStatus created 1
CellType created 1
BlackBoxEvent created 1
DatabaseObject created 1
Publication created 1
InstanceEdit created 1
ReferenceDatabase created 1
FunctionalStatus created 1
InterChainCrosslinkedResidue created 1
SimpleEntity created 1
Requirement created 1
IntraChainCrosslinkedResidue created 1
NegativeRegulation created 1
StableIdentifier created 1
Summation created 1
EvidenceType created 1
StableIdentifierHistory created 1
DrugActionType created 1
SequenceOntology created 1
LiteratureReference created 1
FragmentInsertionModification created 1
GenomeEncodedEntity created 1
_UpdateTracker created 1
Polymerisation created 1
Species created 1
FunctionalStatusType created 1
Regulation created 1
RNADrug created 1
ControlledVocabulary created 1
ReferenceTherapeutic created 1
Polymer created 1
ModifiedNucleotide created 1
ReviewStatus created 1
_Deleted created 1
EntityWithAccessionedSequence created 1
Affiliation created 1
CrosslinkedResidue created 1
NegativeGeneExpressionRegulation created 1
ReferenceGeneProduct created 1
GeneticallyModifiedResidue created 1
GO_BiologicalProcess created 1
CellDevelopmentStep created 1
PathwayDiagram created 1
DefinedSet created 1
GroupModifiedResidue created 1
Person created 1
ReferenceRNASequence created 1
CatalystActivity created 1
CellLineagePath created 1
Event created 1
NegativePrecedingEvent created 1
ReferenceIsoform created 1
URL created 1
GO_MolecularFunction created 1
DeletedControlledVocabulary created 1
RegulationReference created 1
ReferenceMolecule created 1
RetractionStatus created 1
Complex created 1
NonsenseMutation created 1
EntitySet created 1
FragmentDeletionModification created 1
FragmentModification created 1
CandidateSet created 1
FrontPage created 1
AbstractModifiedResidue created 1
NegativePrecedingEventReason created 1
ControlReference created 1
_DeletedInstance created 1
CatalystActivityReference created 1
DatabaseIdentifier created 1
PositiveGeneExpressionRegulation created 1
PositiveRegulation created 1
ReactionType created 1
ReferenceEntity created 1
TranslationalModification created 1
ReactionlikeEvent created 1
_Release created 1
PhysicalEntityCellType created 1
FailedReaction created 1
MarkerReference created 1
Reaction created 1
Taxon created 1
FragmentReplacedModification created 1
ReferenceSequence created 1
ExternalOntology created 1
InteractionEvent created 1
GO_CellularComponent created 1
OtherEntity created 1
ChemicalDrug created 1
ReferenceDNASequence created 1
Drug created 1
ModifiedResidue created 1
Depolymerisation created 1
PhysicalEntity created 1
Compartment created 1
EntityFunctionalStatus created 1
Pathway created 1
ReplacedResidue created 1
Book created 1
Cell created 1
ProteinDrug created 1
Figure created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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