Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
CellLineagePath reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
EntityWithAccessionedSequence reviewed +
ReactionlikeEvent reviewed +
FailedReaction reviewed +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
PhysicalEntity reviewed +
SimpleEntity reviewed +
Polymer reviewed +
Drug reviewed +
Pathway reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
Event reviewed +
Complex reviewed +
OtherEntity reviewed +
RNADrug reviewed +
Depolymerisation reviewed +
Cell reviewed +
Reaction reviewed +
CandidateSet reviewed +
EntitySet reviewed +
DefinedSet reviewed +
CellDevelopmentStep structureModified +
Pathway structureModified +
InteractionEvent structureModified +
Reaction structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
Event structureModified +
EntitySet revised +
CandidateSet revised +
Reaction revised +
DefinedSet revised +
RNADrug revised +
OtherEntity revised +
ChemicalDrug revised +
Event revised +
Complex revised +
ProteinDrug revised +
Cell revised +
Depolymerisation revised +
SimpleEntity revised +
PhysicalEntity revised +
InteractionEvent revised +
CellDevelopmentStep revised +
Pathway revised +
Drug revised +
Polymer revised +
EntityWithAccessionedSequence revised +
Polymerisation revised +
CellLineagePath revised +
GenomeEncodedEntity revised +
BlackBoxEvent revised +
FailedReaction revised +
ReactionlikeEvent revised +
_Deleted replacementInstances +
ReactionlikeEvent authored +
FailedReaction authored +
BlackBoxEvent authored +
CellLineagePath authored +
GenomeEncodedEntity authored 1
Polymerisation authored +
EntityWithAccessionedSequence authored 1
Polymer authored 1
Drug authored 1
Pathway authored +
CellDevelopmentStep authored +
InteractionEvent authored +
PhysicalEntity authored 1
SimpleEntity authored 1
Depolymerisation authored +
Cell authored 1
ProteinDrug authored 1
Event authored +
ChemicalDrug authored 1
Complex authored 1
RNADrug authored 1
OtherEntity authored 1
DefinedSet authored 1
Reaction authored +
CandidateSet authored 1
EntitySet authored 1
RetractionStatus created 1
_UpdateTracker created 1
InteractionEvent created 1
_Deleted created 1
SimpleEntity created 1
CellType created 1
Summation created 1
ExternalOntology created 1
CatalystActivity created 1
NegativePrecedingEventReason created 1
Anatomy created 1
CellLineagePath created 1
ReferenceGeneProduct created 1
DatabaseObject created 1
Publication created 1
CandidateSet created 1
PhysicalEntityCellType created 1
NonsenseMutation created 1
CrosslinkedResidue created 1
Figure created 1
ReferenceRNASequence created 1
FragmentModification created 1
Person created 1
URL created 1
Affiliation created 1
PsiMod created 1
ReferenceGroup created 1
PhysicalEntity created 1
DrugActionType created 1
ReferenceMolecule created 1
Pathway created 1
Polymer created 1
ReactionType created 1
InterChainCrosslinkedResidue created 1
DatabaseIdentifier created 1
FunctionalStatusType created 1
Compartment created 1
Regulation created 1
EntityWithAccessionedSequence created 1
CatalystActivityReference created 1
Disease created 1
EvidenceType created 1
TranslationalModification created 1
BlackBoxEvent created 1
Requirement created 1
FailedReaction created 1
EntitySet created 1
MarkerReference created 1
EntityFunctionalStatus created 1
FragmentDeletionModification created 1
ReferenceSequence created 1
ControlledVocabulary created 1
Event created 1
ModifiedNucleotide created 1
StableIdentifierHistory created 1
Complex created 1
ModifiedResidue created 1
ReferenceDatabase created 1
RNADrug created 1
OtherEntity created 1
GroupModifiedResidue created 1
ReferenceTherapeutic created 1
PositiveRegulation created 1
StableIdentifier created 1
Drug created 1
ReplacedResidue created 1
LiteratureReference created 1
ReviewStatus created 1
Polymerisation created 1
SequenceOntology created 1
GO_MolecularFunction created 1
GenomeEncodedEntity created 1
ReactionlikeEvent created 1
PathwayDiagram created 1
GO_BiologicalProcess created 1
Reaction created 1
FragmentReplacedModification created 1
_Release created 1
NegativeGeneExpressionRegulation created 1
Taxon created 1
ChemicalDrug created 1
ReferenceIsoform created 1
FunctionalStatus created 1
FragmentInsertionModification created 1
NegativePrecedingEvent created 1
AbstractModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
Species created 1
CellDevelopmentStep created 1
NegativeRegulation created 1
TranscriptionalModification created 1
ReferenceEntity created 1
DeletedControlledVocabulary created 1
FrontPage created 1
Book created 1
_DeletedInstance created 1
ReferenceDNASequence created 1
DefinedSet created 1
GO_CellularComponent created 1
ProteinDrug created 1
IntraChainCrosslinkedResidue created 1
InstanceEdit created 1
ControlReference created 1
Depolymerisation created 1
RegulationReference created 1
StableIdentifierReleaseStatus created 1
Cell created 1
GeneticallyModifiedResidue created 1
RNADrug modified +
OtherEntity modified +
ModifiedResidue modified +
ReferenceDatabase modified +
Complex modified +
ModifiedNucleotide modified +
StableIdentifierHistory modified +
Event modified +
ReferenceTherapeutic modified +
GroupModifiedResidue modified +
MarkerReference modified +
EntitySet modified +
ControlledVocabulary modified +
ReferenceSequence modified +
FragmentDeletionModification modified +
EntityFunctionalStatus modified +
CatalystActivityReference modified +
EntityWithAccessionedSequence modified +
Disease modified +
Regulation modified +
FailedReaction modified +
BlackBoxEvent modified +
Requirement modified +
TranslationalModification modified +
EvidenceType modified +
ReferenceMolecule modified +
DrugActionType modified +
PhysicalEntity modified +
FunctionalStatusType modified +
DatabaseIdentifier modified +
Compartment modified +
InterChainCrosslinkedResidue modified +
ReactionType modified +
Polymer modified +
Pathway modified +
URL modified +
Affiliation modified +
PsiMod modified +
ReferenceGroup modified +
Person modified +
Figure modified +
CrosslinkedResidue modified +
NonsenseMutation modified +
CandidateSet modified +
PhysicalEntityCellType modified +
FragmentModification modified +
ReferenceRNASequence modified +
ReferenceGeneProduct modified +
CellLineagePath modified +
DatabaseObject modified +
Publication modified +
SimpleEntity modified +
_Deleted modified +
_UpdateTracker modified +
InteractionEvent modified +
RetractionStatus modified +
Anatomy modified +
NegativePrecedingEventReason modified +
CatalystActivity modified +
ExternalOntology modified +
Summation modified +
CellType modified +
ControlReference modified +
IntraChainCrosslinkedResidue modified +
InstanceEdit modified +
ProteinDrug modified +
GeneticallyModifiedResidue modified +
Cell modified +
StableIdentifierReleaseStatus modified +
RegulationReference modified +
Depolymerisation modified +
_DeletedInstance modified +
GO_CellularComponent modified +
DefinedSet modified +
ReferenceDNASequence modified +
ReferenceEntity modified +
TranscriptionalModification modified +
NegativeRegulation modified +
Book modified +
FrontPage modified +
DeletedControlledVocabulary modified +
AbstractModifiedResidue modified +
CellDevelopmentStep modified +
Species modified +
PositiveGeneExpressionRegulation modified +
FunctionalStatus modified +
Taxon modified +
ReferenceIsoform modified +
ChemicalDrug modified +
NegativePrecedingEvent modified +
FragmentInsertionModification modified +
FragmentReplacedModification modified +
Reaction modified +
GO_BiologicalProcess modified +
PathwayDiagram modified +
NegativeGeneExpressionRegulation modified +
_Release modified +
GenomeEncodedEntity modified +
Polymerisation modified +
GO_MolecularFunction modified +
SequenceOntology modified +
ReviewStatus modified +
LiteratureReference modified +
ReactionlikeEvent modified +
PositiveRegulation modified +
ReplacedResidue modified +
Drug modified +
StableIdentifier modified +
InteractionEvent edited +
PhysicalEntity edited +
SimpleEntity edited +
Drug edited +
Polymer edited +
Pathway edited +
CellDevelopmentStep edited +
CellLineagePath edited +
GenomeEncodedEntity edited +
Polymerisation edited +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
FailedReaction edited +
BlackBoxEvent edited +
Reaction edited +
CandidateSet edited +
EntitySet edited +
DefinedSet edited +
ProteinDrug edited +
Complex edited +
Event edited +
ChemicalDrug edited +
OtherEntity edited +
RNADrug edited +
Depolymerisation edited +
Cell edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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