Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
OtherEntity authored 1
Complex authored 1
FailedReaction authored +
ReactionlikeEvent authored +
RNADrug authored 1
ChemicalDrug authored 1
CandidateSet authored 1
DefinedSet authored 1
EntityWithAccessionedSequence authored 1
InteractionEvent authored +
ProteinDrug authored 1
Event authored +
Pathway authored +
Polymerisation authored +
Depolymerisation authored +
PhysicalEntity authored 1
Polymer authored 1
GenomeEncodedEntity authored 1
BlackBoxEvent authored +
CellLineagePath authored +
Cell authored 1
Drug authored 1
SimpleEntity authored 1
CellDevelopmentStep authored +
Reaction authored +
EntitySet authored 1
ReactionlikeEvent structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
Event structureModified +
Reaction structureModified +
Pathway structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
SimpleEntity modified +
ReferenceTherapeutic modified +
TranslationalModification modified +
Anatomy modified +
Publication modified +
EvidenceType modified +
GeneticallyModifiedResidue modified +
StableIdentifierHistory modified +
PhysicalEntity modified +
GO_CellularComponent modified +
NegativePrecedingEventReason modified +
InterChainCrosslinkedResidue modified +
GroupModifiedResidue modified +
EntitySet modified +
ExternalOntology modified +
CatalystActivityReference modified +
NegativeGeneExpressionRegulation modified +
DefinedSet modified +
Species modified +
EntityWithAccessionedSequence modified +
InstanceEdit modified +
OtherEntity modified +
DatabaseIdentifier modified +
ReviewStatus modified +
Polymerisation modified +
FrontPage modified +
GO_MolecularFunction modified +
CellDevelopmentStep modified +
ReferenceEntity modified +
Drug modified +
NegativeRegulation modified +
Polymer modified +
Affiliation modified +
FragmentModification modified +
GO_BiologicalProcess modified +
ReferenceGroup modified +
URL modified +
Person modified +
_DeletedInstance modified +
CellType modified +
ReactionType modified +
Figure modified +
RNADrug modified +
CatalystActivity modified +
ModifiedResidue modified +
FragmentInsertionModification modified +
AbstractModifiedResidue modified +
RegulationReference modified +
ReplacedResidue modified +
Event modified +
FragmentReplacedModification modified +
_UpdateTracker modified +
PositiveGeneExpressionRegulation modified +
CrosslinkedResidue modified +
Cell modified +
StableIdentifierReleaseStatus modified +
NegativePrecedingEvent modified +
BlackBoxEvent modified +
CellLineagePath modified +
GenomeEncodedEntity modified +
DatabaseObject modified +
Compartment modified +
Reaction modified +
ReferenceMolecule modified +
PhysicalEntityCellType modified +
ReferenceSequence modified +
ChemicalDrug modified +
ReactionlikeEvent modified +
FailedReaction modified +
EntityFunctionalStatus modified +
MarkerReference modified +
ReferenceIsoform modified +
ReferenceGeneProduct modified +
RetractionStatus modified +
Disease modified +
Requirement modified +
Regulation modified +
DeletedControlledVocabulary modified +
ProteinDrug modified +
Summation modified +
ControlReference modified +
_Deleted modified +
TranscriptionalModification modified +
PathwayDiagram modified +
PositiveRegulation modified +
SequenceOntology modified +
Taxon modified +
DrugActionType modified +
FunctionalStatus modified +
IntraChainCrosslinkedResidue modified +
PsiMod modified +
NonsenseMutation modified +
FragmentDeletionModification modified +
ReferenceRNASequence modified +
FunctionalStatusType modified +
ReferenceDNASequence modified +
CandidateSet modified +
ControlledVocabulary modified +
Complex modified +
_Release modified +
Book modified +
Depolymerisation modified +
Pathway modified +
ModifiedNucleotide modified +
ReferenceDatabase modified +
StableIdentifier modified +
LiteratureReference modified +
InteractionEvent modified +
_Deleted replacementInstances +
Pathway edited +
Depolymerisation edited +
Polymerisation edited +
InteractionEvent edited +
Event edited +
ProteinDrug edited +
ChemicalDrug edited +
RNADrug edited +
EntityWithAccessionedSequence edited +
CandidateSet edited +
DefinedSet edited +
Complex edited +
FailedReaction edited +
OtherEntity edited +
ReactionlikeEvent edited +
EntitySet edited +
Reaction edited +
Drug edited +
Cell edited +
CellDevelopmentStep edited +
SimpleEntity edited +
GenomeEncodedEntity edited +
Polymer edited +
PhysicalEntity edited +
CellLineagePath edited +
BlackBoxEvent edited +
Polymer reviewed +
PhysicalEntity reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
CellLineagePath reviewed +
Cell reviewed +
Drug reviewed +
SimpleEntity reviewed +
CellDevelopmentStep reviewed +
Reaction reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
Complex reviewed +
FailedReaction reviewed +
OtherEntity reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
DefinedSet reviewed +
CandidateSet reviewed +
EntityWithAccessionedSequence reviewed +
InteractionEvent reviewed +
ProteinDrug reviewed +
Event reviewed +
Pathway reviewed +
Polymerisation reviewed +
Depolymerisation reviewed +
CellDevelopmentStep created 1
ReferenceEntity created 1
Drug created 1
NegativeRegulation created 1
Affiliation created 1
Polymer created 1
ReferenceGroup created 1
FragmentModification created 1
GO_BiologicalProcess created 1
Person created 1
URL created 1
_DeletedInstance created 1
Figure created 1
ReactionType created 1
CellType created 1
RNADrug created 1
ModifiedResidue created 1
CatalystActivity created 1
FragmentInsertionModification created 1
Event created 1
ReplacedResidue created 1
RegulationReference created 1
AbstractModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
_UpdateTracker created 1
FragmentReplacedModification created 1
TranslationalModification created 1
Publication created 1
Anatomy created 1
ReferenceTherapeutic created 1
SimpleEntity created 1
GeneticallyModifiedResidue created 1
EvidenceType created 1
StableIdentifierHistory created 1
GO_CellularComponent created 1
PhysicalEntity created 1
InterChainCrosslinkedResidue created 1
NegativePrecedingEventReason created 1
EntitySet created 1
GroupModifiedResidue created 1
CatalystActivityReference created 1
ExternalOntology created 1
NegativeGeneExpressionRegulation created 1
EntityWithAccessionedSequence created 1
Species created 1
DefinedSet created 1
InstanceEdit created 1
OtherEntity created 1
DatabaseIdentifier created 1
ReviewStatus created 1
Polymerisation created 1
FrontPage created 1
GO_MolecularFunction created 1
ControlReference created 1
SequenceOntology created 1
TranscriptionalModification created 1
_Deleted created 1
PathwayDiagram created 1
PositiveRegulation created 1
Taxon created 1
DrugActionType created 1
FunctionalStatus created 1
PsiMod created 1
NonsenseMutation created 1
FragmentDeletionModification created 1
IntraChainCrosslinkedResidue created 1
FunctionalStatusType created 1
ReferenceRNASequence created 1
ReferenceDNASequence created 1
CandidateSet created 1
ControlledVocabulary created 1
_Release created 1
Complex created 1
Book created 1
Depolymerisation created 1
Pathway created 1
ModifiedNucleotide created 1
ReferenceDatabase created 1
InteractionEvent created 1
LiteratureReference created 1
StableIdentifier created 1
Cell created 1
CrosslinkedResidue created 1
CellLineagePath created 1
NegativePrecedingEvent created 1
BlackBoxEvent created 1
StableIdentifierReleaseStatus created 1
GenomeEncodedEntity created 1
Compartment created 1
DatabaseObject created 1
PhysicalEntityCellType created 1
Reaction created 1
ReferenceMolecule created 1
ChemicalDrug created 1
ReferenceSequence created 1
ReactionlikeEvent created 1
FailedReaction created 1
ReferenceIsoform created 1
MarkerReference created 1
ReferenceGeneProduct created 1
EntityFunctionalStatus created 1
Disease created 1
RetractionStatus created 1
DeletedControlledVocabulary created 1
Regulation created 1
Requirement created 1
ProteinDrug created 1
Summation created 1
ChemicalDrug revised +
RNADrug revised +
EntityWithAccessionedSequence revised +
CandidateSet revised +
DefinedSet revised +
Complex revised +
OtherEntity revised +
FailedReaction revised +
ReactionlikeEvent revised +
Pathway revised +
Polymerisation revised +
Depolymerisation revised +
InteractionEvent revised +
Event revised +
ProteinDrug revised +
Drug revised +
Cell revised +
CellDevelopmentStep revised +
SimpleEntity revised +
GenomeEncodedEntity revised +
Polymer revised +
PhysicalEntity revised +
CellLineagePath revised +
BlackBoxEvent revised +
EntitySet revised +
Reaction revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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