Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CandidateSet reviewed +
CellDevelopmentStep reviewed +
RNADrug reviewed +
BlackBoxEvent reviewed +
Cell reviewed +
Pathway reviewed +
DefinedSet reviewed +
ChemicalDrug reviewed +
EntitySet reviewed +
CellLineagePath reviewed +
Reaction reviewed +
SimpleEntity reviewed +
Complex reviewed +
ProteinDrug reviewed +
FailedReaction reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
GenomeEncodedEntity reviewed +
Drug reviewed +
EntityWithAccessionedSequence reviewed +
Polymer reviewed +
Event reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
InteractionEvent reviewed +
Polymerisation reviewed +
NegativeGeneExpressionRegulation created 1
PhysicalEntityCellType created 1
InteractionEvent created 1
EntityFunctionalStatus created 1
Polymer created 1
Event created 1
Depolymerisation created 1
PhysicalEntity created 1
ProteinDrug created 1
_Deleted created 1
ReferenceDatabase created 1
ReferenceMolecule created 1
CatalystActivityReference created 1
FunctionalStatusType created 1
PathwayDiagram created 1
CellType created 1
GO_CellularComponent created 1
SimpleEntity created 1
Reaction created 1
URL created 1
FragmentReplacedModification created 1
SequenceOntology created 1
ReactionType created 1
FragmentInsertionModification created 1
ModifiedResidue created 1
DefinedSet created 1
LiteratureReference created 1
GroupModifiedResidue created 1
AbstractModifiedResidue created 1
Anatomy created 1
PositiveGeneExpressionRegulation created 1
EntityWithAccessionedSequence created 1
PsiMod created 1
GO_MolecularFunction created 1
OtherEntity created 1
ModifiedNucleotide created 1
ReferenceEntity created 1
ReferenceIsoform created 1
Person created 1
ControlReference created 1
Summation created 1
Complex created 1
Figure created 1
ReferenceRNASequence created 1
EntitySet created 1
FragmentModification created 1
NonsenseMutation created 1
DatabaseIdentifier created 1
StableIdentifierReleaseStatus created 1
ReviewStatus created 1
NegativePrecedingEvent created 1
Cell created 1
BlackBoxEvent created 1
RNADrug created 1
InstanceEdit created 1
Polymerisation created 1
GO_BiologicalProcess created 1
PositiveRegulation created 1
Book created 1
CrosslinkedResidue created 1
RetractionStatus created 1
GenomeEncodedEntity created 1
FragmentDeletionModification created 1
ReferenceGroup created 1
StableIdentifierHistory created 1
Compartment created 1
CellLineagePath created 1
ChemicalDrug created 1
Regulation created 1
MarkerReference created 1
DatabaseObject created 1
GeneticallyModifiedResidue created 1
Affiliation created 1
CellDevelopmentStep created 1
InterChainCrosslinkedResidue created 1
Species created 1
EvidenceType created 1
_DeletedInstance created 1
ReactionlikeEvent created 1
Drug created 1
ReferenceDNASequence created 1
DeletedControlledVocabulary created 1
ControlledVocabulary created 1
StableIdentifier created 1
NegativePrecedingEventReason created 1
FailedReaction created 1
ReferenceSequence created 1
TranslationalModification created 1
ExternalOntology created 1
RegulationReference created 1
IntraChainCrosslinkedResidue created 1
FrontPage created 1
ReferenceGeneProduct created 1
ReplacedResidue created 1
CatalystActivity created 1
Taxon created 1
Requirement created 1
ReferenceTherapeutic created 1
Publication created 1
FunctionalStatus created 1
TranscriptionalModification created 1
_Release created 1
NegativeRegulation created 1
Pathway created 1
DrugActionType created 1
Disease created 1
CandidateSet created 1
_UpdateTracker created 1
Event structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
FailedReaction structureModified +
CellLineagePath revised +
EntitySet revised +
ChemicalDrug revised +
DefinedSet revised +
Complex revised +
Reaction revised +
SimpleEntity revised +
Cell revised +
CellDevelopmentStep revised +
BlackBoxEvent revised +
RNADrug revised +
CandidateSet revised +
Pathway revised +
Polymer revised +
Depolymerisation revised +
Event revised +
EntityWithAccessionedSequence revised +
Drug revised +
Polymerisation revised +
InteractionEvent revised +
ReactionlikeEvent revised +
ProteinDrug revised +
GenomeEncodedEntity revised +
PhysicalEntity revised +
OtherEntity revised +
FailedReaction revised +
_Deleted replacementInstances +
Drug edited +
EntityWithAccessionedSequence edited +
Depolymerisation edited +
Polymer edited +
Event edited +
Polymerisation edited +
ReactionlikeEvent edited +
InteractionEvent edited +
ProteinDrug edited +
PhysicalEntity edited +
OtherEntity edited +
GenomeEncodedEntity edited +
FailedReaction edited +
CellLineagePath edited +
EntitySet edited +
ChemicalDrug edited +
DefinedSet edited +
Complex edited +
Reaction edited +
SimpleEntity edited +
Cell edited +
CandidateSet edited +
CellDevelopmentStep edited +
BlackBoxEvent edited +
RNADrug edited +
Pathway edited +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
Pathway authored +
CandidateSet authored 1
CellDevelopmentStep authored +
BlackBoxEvent authored +
RNADrug authored 1
Cell authored 1
Reaction authored +
SimpleEntity authored 1
Complex authored 1
ChemicalDrug authored 1
EntitySet authored 1
DefinedSet authored 1
CellLineagePath authored +
FailedReaction authored +
OtherEntity authored 1
PhysicalEntity authored 1
GenomeEncodedEntity authored 1
ProteinDrug authored 1
ReactionlikeEvent authored +
InteractionEvent authored +
Polymerisation authored +
EntityWithAccessionedSequence authored 1
Drug authored 1
Polymer authored 1
Event authored +
Depolymerisation authored +
StableIdentifierReleaseStatus modified +
ReviewStatus modified +
NegativePrecedingEvent modified +
DatabaseIdentifier modified +
FragmentModification modified +
NonsenseMutation modified +
Cell modified +
BlackBoxEvent modified +
RNADrug modified +
Complex modified +
Figure modified +
EntitySet modified +
ReferenceRNASequence modified +
OtherEntity modified +
ReferenceIsoform modified +
ReferenceEntity modified +
ModifiedNucleotide modified +
ControlReference modified +
Person modified +
Summation modified +
AbstractModifiedResidue modified +
Anatomy modified +
PositiveGeneExpressionRegulation modified +
EntityWithAccessionedSequence modified +
GO_MolecularFunction modified +
PsiMod modified +
LiteratureReference modified +
GroupModifiedResidue modified +
PathwayDiagram modified +
GO_CellularComponent modified +
CellType modified +
Reaction modified +
SimpleEntity modified +
FragmentInsertionModification modified +
ReactionType modified +
URL modified +
SequenceOntology modified +
FragmentReplacedModification modified +
ModifiedResidue modified +
DefinedSet modified +
PhysicalEntity modified +
CatalystActivityReference modified +
ReferenceMolecule modified +
ProteinDrug modified +
_Deleted modified +
ReferenceDatabase modified +
FunctionalStatusType modified +
PhysicalEntityCellType modified +
NegativeGeneExpressionRegulation modified +
EntityFunctionalStatus modified +
InteractionEvent modified +
Event modified +
Polymer modified +
Depolymerisation modified +
TranscriptionalModification modified +
_Release modified +
Pathway modified +
NegativeRegulation modified +
DrugActionType modified +
_UpdateTracker modified +
CandidateSet modified +
Disease modified +
ReferenceGeneProduct modified +
CatalystActivity modified +
ReplacedResidue modified +
Taxon modified +
FunctionalStatus modified +
Publication modified +
Requirement modified +
ReferenceTherapeutic modified +
StableIdentifier modified +
TranslationalModification modified +
FailedReaction modified +
ReferenceSequence modified +
NegativePrecedingEventReason modified +
ExternalOntology modified +
IntraChainCrosslinkedResidue modified +
FrontPage modified +
RegulationReference modified +
_DeletedInstance modified +
ReactionlikeEvent modified +
EvidenceType modified +
Drug modified +
ReferenceDNASequence modified +
ControlledVocabulary modified +
DeletedControlledVocabulary modified +
Regulation modified +
MarkerReference modified +
DatabaseObject modified +
GeneticallyModifiedResidue modified +
Species modified +
CellDevelopmentStep modified +
Affiliation modified +
InterChainCrosslinkedResidue modified +
Compartment modified +
StableIdentifierHistory modified +
CellLineagePath modified +
ChemicalDrug modified +
GenomeEncodedEntity modified +
RetractionStatus modified +
FragmentDeletionModification modified +
ReferenceGroup modified +
Polymerisation modified +
GO_BiologicalProcess modified +
InstanceEdit modified +
PositiveRegulation modified +
Book modified +
CrosslinkedResidue modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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