Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Event revised +
Polymerisation revised +
Drug revised +
Pathway revised +
ReactionlikeEvent revised +
ProteinDrug revised +
RNADrug revised +
EntityWithAccessionedSequence revised +
Depolymerisation revised +
Cell revised +
DefinedSet revised +
CellDevelopmentStep revised +
FailedReaction revised +
ChemicalDrug revised +
CellLineagePath revised +
Complex revised +
EntitySet revised +
OtherEntity revised +
Polymer revised +
PhysicalEntity revised +
Reaction revised +
BlackBoxEvent revised +
InteractionEvent revised +
GenomeEncodedEntity revised +
CandidateSet revised +
SimpleEntity revised +
_Release created 1
ReviewStatus created 1
ReferenceDatabase created 1
GO_BiologicalProcess created 1
EntitySet created 1
ReferenceIsoform created 1
PhysicalEntityCellType created 1
StableIdentifier created 1
OtherEntity created 1
Polymer created 1
DeletedControlledVocabulary created 1
RegulationReference created 1
Reaction created 1
BlackBoxEvent created 1
FragmentDeletionModification created 1
FragmentModification created 1
GenomeEncodedEntity created 1
EntityFunctionalStatus created 1
FragmentInsertionModification created 1
SequenceOntology created 1
Publication created 1
Anatomy created 1
InterChainCrosslinkedResidue created 1
FrontPage created 1
PathwayDiagram created 1
CatalystActivityReference created 1
TranslationalModification created 1
LiteratureReference created 1
DatabaseObject created 1
AbstractModifiedResidue created 1
GO_CellularComponent created 1
Depolymerisation created 1
NegativeGeneExpressionRegulation created 1
ReferenceSequence created 1
CrosslinkedResidue created 1
ModifiedResidue created 1
Disease created 1
GeneticallyModifiedResidue created 1
FailedReaction created 1
InstanceEdit created 1
ControlReference created 1
ReferenceDNASequence created 1
GroupModifiedResidue created 1
_UpdateTracker created 1
FragmentReplacedModification created 1
FunctionalStatusType created 1
StableIdentifierHistory created 1
Drug created 1
RNADrug created 1
ReferenceGroup created 1
TranscriptionalModification created 1
IntraChainCrosslinkedResidue created 1
CatalystActivity created 1
Cell created 1
NegativePrecedingEventReason created 1
DefinedSet created 1
ControlledVocabulary created 1
_Deleted created 1
ModifiedNucleotide created 1
CellLineagePath created 1
CellDevelopmentStep created 1
NegativePrecedingEvent created 1
ReactionType created 1
Figure created 1
Compartment created 1
PsiMod created 1
RetractionStatus created 1
SimpleEntity created 1
Person created 1
CandidateSet created 1
ReplacedResidue created 1
Taxon created 1
Species created 1
DatabaseIdentifier created 1
MarkerReference created 1
StableIdentifierReleaseStatus created 1
_DeletedInstance created 1
GO_MolecularFunction created 1
Summation created 1
PositiveGeneExpressionRegulation created 1
NonsenseMutation created 1
EntityWithAccessionedSequence created 1
ProteinDrug created 1
FunctionalStatus created 1
ReferenceEntity created 1
ReferenceMolecule created 1
ChemicalDrug created 1
CellType created 1
NegativeRegulation created 1
Complex created 1
InteractionEvent created 1
URL created 1
PhysicalEntity created 1
Affiliation created 1
DrugActionType created 1
PositiveRegulation created 1
EvidenceType created 1
ReferenceRNASequence created 1
Event created 1
Regulation created 1
Polymerisation created 1
ReferenceGeneProduct created 1
Requirement created 1
ExternalOntology created 1
ReactionlikeEvent created 1
Book created 1
Pathway created 1
ReferenceTherapeutic created 1
EntitySet edited +
Complex edited +
ChemicalDrug edited +
CellLineagePath edited +
CellDevelopmentStep edited +
FailedReaction edited +
SimpleEntity edited +
CandidateSet edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
OtherEntity edited +
Polymer edited +
PhysicalEntity edited +
Reaction edited +
BlackBoxEvent edited +
Polymerisation edited +
Drug edited +
Event edited +
Cell edited +
DefinedSet edited +
Depolymerisation edited +
RNADrug edited +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
Pathway edited +
ProteinDrug edited +
Depolymerisation structureModified +
InteractionEvent structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
Event structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
Polymerisation modified +
ReferenceGeneProduct modified +
ReferenceRNASequence modified +
Event modified +
Regulation modified +
ReferenceTherapeutic modified +
Pathway modified +
ReactionlikeEvent modified +
Book modified +
ExternalOntology modified +
Requirement modified +
Complex modified +
NegativeRegulation modified +
ChemicalDrug modified +
CellType modified +
PositiveRegulation modified +
EvidenceType modified +
DrugActionType modified +
URL modified +
PhysicalEntity modified +
Affiliation modified +
InteractionEvent modified +
PositiveGeneExpressionRegulation modified +
NonsenseMutation modified +
Summation modified +
GO_MolecularFunction modified +
_DeletedInstance modified +
DatabaseIdentifier modified +
Taxon modified +
Species modified +
MarkerReference modified +
StableIdentifierReleaseStatus modified +
ReferenceMolecule modified +
FunctionalStatus modified +
ReferenceEntity modified +
ProteinDrug modified +
EntityWithAccessionedSequence modified +
ReactionType modified +
Figure modified +
Compartment modified +
NegativePrecedingEvent modified +
CellDevelopmentStep modified +
ModifiedNucleotide modified +
_Deleted modified +
CellLineagePath modified +
CandidateSet modified +
ReplacedResidue modified +
SimpleEntity modified +
RetractionStatus modified +
Person modified +
PsiMod modified +
Drug modified +
StableIdentifierHistory modified +
FunctionalStatusType modified +
FragmentReplacedModification modified +
_UpdateTracker modified +
CatalystActivity modified +
Cell modified +
ControlledVocabulary modified +
DefinedSet modified +
NegativePrecedingEventReason modified +
TranscriptionalModification modified +
IntraChainCrosslinkedResidue modified +
RNADrug modified +
ReferenceGroup modified +
ControlReference modified +
ReferenceDNASequence modified +
InstanceEdit modified +
GeneticallyModifiedResidue modified +
FailedReaction modified +
Disease modified +
ModifiedResidue modified +
GroupModifiedResidue modified +
LiteratureReference modified +
TranslationalModification modified +
CatalystActivityReference modified +
DatabaseObject modified +
FrontPage modified +
InterChainCrosslinkedResidue modified +
PathwayDiagram modified +
Anatomy modified +
FragmentInsertionModification modified +
Publication modified +
SequenceOntology modified +
ReferenceSequence modified +
Depolymerisation modified +
NegativeGeneExpressionRegulation modified +
CrosslinkedResidue modified +
GO_CellularComponent modified +
AbstractModifiedResidue modified +
PhysicalEntityCellType modified +
ReferenceIsoform modified +
StableIdentifier modified +
ReferenceDatabase modified +
GO_BiologicalProcess modified +
EntitySet modified +
ReviewStatus modified +
_Release modified +
GenomeEncodedEntity modified +
EntityFunctionalStatus modified +
FragmentDeletionModification modified +
FragmentModification modified +
Polymer modified +
DeletedControlledVocabulary modified +
OtherEntity modified +
Reaction modified +
RegulationReference modified +
BlackBoxEvent modified +
_Deleted replacementInstances +
CellLineagePath authored +
ChemicalDrug authored 1
CellDevelopmentStep authored +
FailedReaction authored +
EntitySet authored 1
Complex authored 1
InteractionEvent authored +
PhysicalEntity authored 1
Polymer authored 1
OtherEntity authored 1
BlackBoxEvent authored +
Reaction authored +
SimpleEntity authored 1
CandidateSet authored 1
GenomeEncodedEntity authored 1
Event authored +
Polymerisation authored +
Drug authored 1
RNADrug authored 1
EntityWithAccessionedSequence authored 1
Pathway authored +
ReactionlikeEvent authored +
ProteinDrug authored 1
Cell authored 1
DefinedSet authored 1
Depolymerisation authored +
Event internalReviewed +
FailedReaction internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
FailedReaction reviewed +
CellDevelopmentStep reviewed +
ChemicalDrug reviewed +
CellLineagePath reviewed +
Complex reviewed +
EntitySet reviewed +
BlackBoxEvent reviewed +
Reaction reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
OtherEntity reviewed +
InteractionEvent reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
Event reviewed +
Drug reviewed +
Polymerisation reviewed +
ProteinDrug reviewed +
ReactionlikeEvent reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
RNADrug reviewed +
Depolymerisation reviewed +
DefinedSet reviewed +
Cell reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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