Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Complex revised +
Pathway revised +
Drug revised +
DefinedSet revised +
Depolymerisation revised +
Cell revised +
GenomeEncodedEntity revised +
ReactionlikeEvent revised +
CellLineagePath revised +
Polymer revised +
PhysicalEntity revised +
RNADrug revised +
EntitySet revised +
InteractionEvent revised +
Event revised +
BlackBoxEvent revised +
ChemicalDrug revised +
Polymerisation revised +
CandidateSet revised +
Reaction revised +
SimpleEntity revised +
FailedReaction revised +
CellDevelopmentStep revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
OtherEntity revised +
EntityFunctionalStatus created 1
FunctionalStatus created 1
ReferenceSequence created 1
GenomeEncodedEntity created 1
DeletedControlledVocabulary created 1
TranscriptionalModification created 1
SequenceOntology created 1
DefinedSet created 1
InterChainCrosslinkedResidue created 1
_Deleted created 1
Figure created 1
GO_BiologicalProcess created 1
_UpdateTracker created 1
ControlReference created 1
Person created 1
PathwayDiagram created 1
StableIdentifier created 1
TranslationalModification created 1
RetractionStatus created 1
FragmentDeletionModification created 1
Book created 1
CellLineagePath created 1
StableIdentifierReleaseStatus created 1
Summation created 1
ReactionlikeEvent created 1
NonsenseMutation created 1
Cell created 1
GeneticallyModifiedResidue created 1
ReferenceTherapeutic created 1
Pathway created 1
CrosslinkedResidue created 1
GO_MolecularFunction created 1
PositiveRegulation created 1
EntityWithAccessionedSequence created 1
CatalystActivityReference created 1
CellDevelopmentStep created 1
Disease created 1
ChemicalDrug created 1
ModifiedNucleotide created 1
LiteratureReference created 1
EvidenceType created 1
_DeletedInstance created 1
ControlledVocabulary created 1
Event created 1
ReferenceIsoform created 1
EntitySet created 1
RNADrug created 1
MarkerReference created 1
InteractionEvent created 1
_Release created 1
PhysicalEntity created 1
NegativeRegulation created 1
ReferenceGeneProduct created 1
Polymer created 1
RegulationReference created 1
Compartment created 1
URL created 1
Publication created 1
DatabaseIdentifier created 1
ReactionType created 1
Affiliation created 1
NegativePrecedingEventReason created 1
Requirement created 1
NegativeGeneExpressionRegulation created 1
FragmentModification created 1
ExternalOntology created 1
ProteinDrug created 1
OtherEntity created 1
SimpleEntity created 1
Anatomy created 1
Polymerisation created 1
ReferenceDatabase created 1
ReviewStatus created 1
ReplacedResidue created 1
CellType created 1
FragmentInsertionModification created 1
FunctionalStatusType created 1
ReferenceMolecule created 1
Species created 1
PositiveGeneExpressionRegulation created 1
NegativePrecedingEvent created 1
CatalystActivity created 1
PhysicalEntityCellType created 1
StableIdentifierHistory created 1
ReferenceRNASequence created 1
Depolymerisation created 1
InstanceEdit created 1
PsiMod created 1
Complex created 1
Drug created 1
Regulation created 1
FrontPage created 1
ReferenceEntity created 1
ReferenceGroup created 1
AbstractModifiedResidue created 1
DatabaseObject created 1
FailedReaction created 1
IntraChainCrosslinkedResidue created 1
CandidateSet created 1
Reaction created 1
ModifiedResidue created 1
GroupModifiedResidue created 1
DrugActionType created 1
BlackBoxEvent created 1
Taxon created 1
FragmentReplacedModification created 1
GO_CellularComponent created 1
ReferenceDNASequence created 1
ChemicalDrug edited +
CandidateSet edited +
Reaction edited +
Polymerisation edited +
SimpleEntity edited +
FailedReaction edited +
CellDevelopmentStep edited +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
OtherEntity edited +
EntitySet edited +
RNADrug edited +
InteractionEvent edited +
Event edited +
BlackBoxEvent edited +
ReactionlikeEvent edited +
GenomeEncodedEntity edited +
CellLineagePath edited +
Polymer edited +
PhysicalEntity edited +
Complex edited +
Pathway edited +
Drug edited +
DefinedSet edited +
Depolymerisation edited +
Cell edited +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
PhysicalEntity authored 1
Polymer authored 1
CellLineagePath authored +
DefinedSet authored 1
Drug authored 1
Pathway authored +
Complex authored 1
Cell authored 1
Depolymerisation authored +
Polymerisation authored +
CandidateSet authored 1
Reaction authored +
ChemicalDrug authored 1
OtherEntity authored 1
EntityWithAccessionedSequence authored 1
ProteinDrug authored 1
CellDevelopmentStep authored +
FailedReaction authored +
SimpleEntity authored 1
Event authored +
InteractionEvent authored +
RNADrug authored 1
EntitySet authored 1
BlackBoxEvent authored +
InteractionEvent structureModified +
Pathway structureModified +
Event structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
Reaction structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
Polymer reviewed +
CellLineagePath reviewed +
PhysicalEntity reviewed +
Drug reviewed +
Complex reviewed +
Pathway reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
Cell reviewed +
ChemicalDrug reviewed +
Polymerisation reviewed +
CandidateSet reviewed +
Reaction reviewed +
FailedReaction reviewed +
CellDevelopmentStep reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
OtherEntity reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
EntitySet reviewed +
RNADrug reviewed +
Event reviewed +
BlackBoxEvent reviewed +
_Deleted replacementInstances +
ControlledVocabulary modified +
_DeletedInstance modified +
EvidenceType modified +
LiteratureReference modified +
ModifiedNucleotide modified +
MarkerReference modified +
InteractionEvent modified +
EntitySet modified +
ReferenceIsoform modified +
RNADrug modified +
Event modified +
CellDevelopmentStep modified +
EntityWithAccessionedSequence modified +
CatalystActivityReference modified +
ChemicalDrug modified +
Disease modified +
ReferenceTherapeutic modified +
GeneticallyModifiedResidue modified +
Cell modified +
NonsenseMutation modified +
PositiveRegulation modified +
CrosslinkedResidue modified +
Pathway modified +
GO_MolecularFunction modified +
CellLineagePath modified +
ReactionlikeEvent modified +
Summation modified +
StableIdentifierReleaseStatus modified +
FragmentDeletionModification modified +
RetractionStatus modified +
Book modified +
_UpdateTracker modified +
GO_BiologicalProcess modified +
Figure modified +
StableIdentifier modified +
TranslationalModification modified +
PathwayDiagram modified +
Person modified +
ControlReference modified +
SequenceOntology modified +
_Deleted modified +
InterChainCrosslinkedResidue modified +
DefinedSet modified +
ReferenceSequence modified +
EntityFunctionalStatus modified +
FunctionalStatus modified +
TranscriptionalModification modified +
DeletedControlledVocabulary modified +
GenomeEncodedEntity modified +
ReferenceDNASequence modified +
FragmentReplacedModification modified +
GO_CellularComponent modified +
DrugActionType modified +
BlackBoxEvent modified +
Taxon modified +
DatabaseObject modified +
FailedReaction modified +
AbstractModifiedResidue modified +
ReferenceGroup modified +
FrontPage modified +
ReferenceEntity modified +
GroupModifiedResidue modified +
ModifiedResidue modified +
Reaction modified +
CandidateSet modified +
IntraChainCrosslinkedResidue modified +
Depolymerisation modified +
ReferenceRNASequence modified +
PhysicalEntityCellType modified +
StableIdentifierHistory modified +
Regulation modified +
Drug modified +
Complex modified +
PsiMod modified +
InstanceEdit modified +
Species modified +
CatalystActivity modified +
NegativePrecedingEvent modified +
PositiveGeneExpressionRegulation modified +
CellType modified +
ReviewStatus modified +
ReplacedResidue modified +
ReferenceMolecule modified +
FunctionalStatusType modified +
FragmentInsertionModification modified +
Anatomy modified +
SimpleEntity modified +
OtherEntity modified +
ExternalOntology modified +
FragmentModification modified +
ProteinDrug modified +
ReferenceDatabase modified +
Polymerisation modified +
ReactionType modified +
DatabaseIdentifier modified +
URL modified +
Publication modified +
NegativeGeneExpressionRegulation modified +
Requirement modified +
Affiliation modified +
NegativePrecedingEventReason modified +
Polymer modified +
RegulationReference modified +
NegativeRegulation modified +
ReferenceGeneProduct modified +
PhysicalEntity modified +
_Release modified +
Compartment modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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