Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
EntityWithAccessionedSequence revised +
OtherEntity revised +
DefinedSet revised +
Complex revised +
ReactionlikeEvent revised +
Event revised +
ChemicalDrug revised +
CellLineagePath revised +
RNADrug revised +
CandidateSet revised +
BlackBoxEvent revised +
EntitySet revised +
Drug revised +
Reaction revised +
Pathway revised +
Polymer revised +
InteractionEvent revised +
ProteinDrug revised +
PhysicalEntity revised +
GenomeEncodedEntity revised +
Polymerisation revised +
CellDevelopmentStep revised +
FailedReaction revised +
SimpleEntity revised +
Depolymerisation revised +
Cell revised +
DeletedControlledVocabulary created 1
Polymer created 1
Pathway created 1
ReferenceGeneProduct created 1
_Deleted created 1
Polymerisation created 1
ControlReference created 1
EvidenceType created 1
StableIdentifierHistory created 1
CrosslinkedResidue created 1
ReplacedResidue created 1
Disease created 1
RNADrug created 1
RegulationReference created 1
ModifiedNucleotide created 1
IntraChainCrosslinkedResidue created 1
ControlledVocabulary created 1
TranscriptionalModification created 1
Affiliation created 1
SequenceOntology created 1
CellLineagePath created 1
Requirement created 1
ReferenceGroup created 1
NegativePrecedingEvent created 1
Species created 1
OtherEntity created 1
Figure created 1
ProteinDrug created 1
InteractionEvent created 1
_UpdateTracker created 1
Publication created 1
Reaction created 1
FunctionalStatus created 1
CellType created 1
_Release created 1
Cell created 1
SimpleEntity created 1
GenomeEncodedEntity created 1
BlackBoxEvent created 1
InstanceEdit created 1
MarkerReference created 1
Regulation created 1
Complex created 1
PsiMod created 1
PhysicalEntityCellType created 1
FrontPage created 1
NegativeRegulation created 1
AbstractModifiedResidue created 1
PathwayDiagram created 1
PositiveGeneExpressionRegulation created 1
FragmentReplacedModification created 1
ReferenceRNASequence created 1
CatalystActivityReference created 1
PhysicalEntity created 1
ModifiedResidue created 1
CellDevelopmentStep created 1
GO_MolecularFunction created 1
Depolymerisation created 1
ReviewStatus created 1
ReactionType created 1
ReferenceIsoform created 1
Anatomy created 1
ReferenceTherapeutic created 1
CandidateSet created 1
FunctionalStatusType created 1
DatabaseObject created 1
EntitySet created 1
Drug created 1
URL created 1
CatalystActivity created 1
RetractionStatus created 1
GroupModifiedResidue created 1
ReactionlikeEvent created 1
FragmentInsertionModification created 1
ReferenceDNASequence created 1
Person created 1
GO_CellularComponent created 1
Event created 1
ReferenceDatabase created 1
FragmentModification created 1
ExternalOntology created 1
DrugActionType created 1
Summation created 1
DatabaseIdentifier created 1
NegativeGeneExpressionRegulation created 1
ReferenceMolecule created 1
FailedReaction created 1
Taxon created 1
ReferenceSequence created 1
FragmentDeletionModification created 1
EntityFunctionalStatus created 1
GeneticallyModifiedResidue created 1
_DeletedInstance created 1
ReferenceEntity created 1
StableIdentifier created 1
StableIdentifierReleaseStatus created 1
Book created 1
GO_BiologicalProcess created 1
TranslationalModification created 1
ChemicalDrug created 1
InterChainCrosslinkedResidue created 1
EntityWithAccessionedSequence created 1
NonsenseMutation created 1
NegativePrecedingEventReason created 1
DefinedSet created 1
PositiveRegulation created 1
Compartment created 1
LiteratureReference created 1
PhysicalEntity edited +
InteractionEvent edited +
ProteinDrug edited +
Polymer edited +
Reaction edited +
Pathway edited +
SimpleEntity edited +
Depolymerisation edited +
Cell edited +
CellDevelopmentStep edited +
FailedReaction edited +
Polymerisation edited +
GenomeEncodedEntity edited +
BlackBoxEvent edited +
CandidateSet edited +
RNADrug edited +
Drug edited +
EntitySet edited +
ReactionlikeEvent edited +
Complex edited +
CellLineagePath edited +
ChemicalDrug edited +
Event edited +
EntityWithAccessionedSequence edited +
OtherEntity edited +
DefinedSet edited +
CandidateSet reviewed +
RNADrug reviewed +
BlackBoxEvent reviewed +
EntitySet reviewed +
Drug reviewed +
Pathway reviewed +
Polymer reviewed +
Reaction reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
PhysicalEntity reviewed +
GenomeEncodedEntity reviewed +
FailedReaction reviewed +
CellDevelopmentStep reviewed +
Polymerisation reviewed +
Depolymerisation reviewed +
Cell reviewed +
SimpleEntity reviewed +
OtherEntity reviewed +
EntityWithAccessionedSequence reviewed +
DefinedSet reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
ChemicalDrug reviewed +
CellLineagePath reviewed +
_Deleted replacementInstances +
Event structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Reaction structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
FunctionalStatusType modified +
CandidateSet modified +
ReferenceTherapeutic modified +
RetractionStatus modified +
CatalystActivity modified +
Drug modified +
URL modified +
DatabaseObject modified +
EntitySet modified +
ModifiedResidue modified +
PhysicalEntity modified +
CatalystActivityReference modified +
ReactionType modified +
Anatomy modified +
ReferenceIsoform modified +
ReviewStatus modified +
Depolymerisation modified +
GO_MolecularFunction modified +
CellDevelopmentStep modified +
FragmentModification modified +
ExternalOntology modified +
ReferenceDatabase modified +
NegativeGeneExpressionRegulation modified +
DatabaseIdentifier modified +
Summation modified +
DrugActionType modified +
ReferenceDNASequence modified +
GroupModifiedResidue modified +
ReactionlikeEvent modified +
FragmentInsertionModification modified +
Event modified +
Person modified +
GO_CellularComponent modified +
FragmentDeletionModification modified +
ReferenceSequence modified +
StableIdentifier modified +
ReferenceEntity modified +
EntityFunctionalStatus modified +
GeneticallyModifiedResidue modified +
_DeletedInstance modified +
ReferenceMolecule modified +
Taxon modified +
FailedReaction modified +
NegativePrecedingEventReason modified +
NonsenseMutation modified +
InterChainCrosslinkedResidue modified +
EntityWithAccessionedSequence modified +
Compartment modified +
LiteratureReference modified +
DefinedSet modified +
PositiveRegulation modified +
StableIdentifierReleaseStatus modified +
ChemicalDrug modified +
TranslationalModification modified +
Book modified +
GO_BiologicalProcess modified +
ModifiedNucleotide modified +
RNADrug modified +
RegulationReference modified +
Disease modified +
ReplacedResidue modified +
Affiliation modified +
TranscriptionalModification modified +
ControlledVocabulary modified +
IntraChainCrosslinkedResidue modified +
_Deleted modified +
ReferenceGeneProduct modified +
Polymer modified +
Pathway modified +
DeletedControlledVocabulary modified +
CrosslinkedResidue modified +
StableIdentifierHistory modified +
EvidenceType modified +
Polymerisation modified +
ControlReference modified +
OtherEntity modified +
Species modified +
Figure modified +
SequenceOntology modified +
NegativePrecedingEvent modified +
ReferenceGroup modified +
Requirement modified +
CellLineagePath modified +
InstanceEdit modified +
BlackBoxEvent modified +
MarkerReference modified +
CellType modified +
_Release modified +
FunctionalStatus modified +
Reaction modified +
Publication modified +
_UpdateTracker modified +
InteractionEvent modified +
ProteinDrug modified +
GenomeEncodedEntity modified +
Cell modified +
SimpleEntity modified +
AbstractModifiedResidue modified +
NegativeRegulation modified +
PhysicalEntityCellType modified +
FrontPage modified +
PsiMod modified +
PositiveGeneExpressionRegulation modified +
FragmentReplacedModification modified +
ReferenceRNASequence modified +
PathwayDiagram modified +
Complex modified +
Regulation modified +
Pathway authored +
Reaction authored +
Polymer authored 1
PhysicalEntity authored 1
InteractionEvent authored +
ProteinDrug authored 1
GenomeEncodedEntity authored 1
Cell authored 1
Depolymerisation authored +
SimpleEntity authored 1
CellDevelopmentStep authored +
FailedReaction authored +
Polymerisation authored +
CandidateSet authored 1
RNADrug authored 1
BlackBoxEvent authored +
Drug authored 1
EntitySet authored 1
Complex authored 1
ReactionlikeEvent authored +
ChemicalDrug authored 1
Event authored +
CellLineagePath authored +
EntityWithAccessionedSequence authored 1
OtherEntity authored 1
DefinedSet authored 1
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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