Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Book modified +
PhysicalEntity modified +
Species modified +
ChemicalDrug modified +
DefinedSet modified +
NonsenseMutation modified +
ReactionlikeEvent modified +
DatabaseIdentifier modified +
CellLineagePath modified +
DrugActionType modified +
EntitySet modified +
Compartment modified +
ReviewStatus modified +
FragmentReplacedModification modified +
_UpdateTracker modified +
Figure modified +
_Release modified +
Publication modified +
EntityFunctionalStatus modified +
PathwayDiagram modified +
StableIdentifierHistory modified +
MarkerReference modified +
_Deleted modified +
Anatomy modified +
CatalystActivity modified +
PhysicalEntityCellType modified +
Pathway modified +
TranslationalModification modified +
ReferenceTherapeutic modified +
Complex modified +
Taxon modified +
ReferenceGeneProduct modified +
GenomeEncodedEntity modified +
GroupModifiedResidue modified +
ModifiedNucleotide modified +
URL modified +
FragmentDeletionModification modified +
ModifiedResidue modified +
EntityWithAccessionedSequence modified +
RNADrug modified +
ReferenceRNASequence modified +
Drug modified +
CellDevelopmentStep modified +
ReferenceMolecule modified +
ReferenceIsoform modified +
CrosslinkedResidue modified +
PsiMod modified +
InstanceEdit modified +
ReactionType modified +
EvidenceType modified +
Polymer modified +
Requirement modified +
FunctionalStatusType modified +
Depolymerisation modified +
GeneticallyModifiedResidue modified +
Polymerisation modified +
_DeletedInstance modified +
ControlledVocabulary modified +
PositiveRegulation modified +
DatabaseObject modified +
Reaction modified +
ReferenceSequence modified +
GO_MolecularFunction modified +
GO_CellularComponent modified +
Cell modified +
CellType modified +
FunctionalStatus modified +
NegativeGeneExpressionRegulation modified +
AbstractModifiedResidue modified +
NegativePrecedingEventReason modified +
FailedReaction modified +
ExternalOntology modified +
ReferenceGroup modified +
StableIdentifier modified +
TranscriptionalModification modified +
SequenceOntology modified +
ReferenceEntity modified +
StableIdentifierReleaseStatus modified +
NegativeRegulation modified +
Person modified +
InteractionEvent modified +
SimpleEntity modified +
CatalystActivityReference modified +
InterChainCrosslinkedResidue modified +
LiteratureReference modified +
Disease modified +
FrontPage modified +
Summation modified +
RetractionStatus modified +
IntraChainCrosslinkedResidue modified +
OtherEntity modified +
RegulationReference modified +
FragmentInsertionModification modified +
Affiliation modified +
BlackBoxEvent modified +
ReplacedResidue modified +
GO_BiologicalProcess modified +
DeletedControlledVocabulary modified +
ControlReference modified +
FragmentModification modified +
Event modified +
ReferenceDatabase modified +
PositiveGeneExpressionRegulation modified +
ProteinDrug modified +
CandidateSet modified +
Regulation modified +
ReferenceDNASequence modified +
NegativePrecedingEvent modified +
Reaction edited +
GenomeEncodedEntity edited +
Cell edited +
ChemicalDrug edited +
PhysicalEntity edited +
ReactionlikeEvent edited +
DefinedSet edited +
FailedReaction edited +
CellLineagePath edited +
EntityWithAccessionedSequence edited +
EntitySet edited +
RNADrug edited +
OtherEntity edited +
Drug edited +
CellDevelopmentStep edited +
BlackBoxEvent edited +
Event edited +
Polymer edited +
Depolymerisation edited +
InteractionEvent edited +
CandidateSet edited +
ProteinDrug edited +
Polymerisation edited +
SimpleEntity edited +
Pathway edited +
Complex edited +
CatalystActivityReference created 1
SimpleEntity created 1
InterChainCrosslinkedResidue created 1
LiteratureReference created 1
StableIdentifierReleaseStatus created 1
Person created 1
InteractionEvent created 1
NegativeRegulation created 1
TranscriptionalModification created 1
StableIdentifier created 1
ReferenceGroup created 1
ReferenceEntity created 1
SequenceOntology created 1
Cell created 1
CellType created 1
Reaction created 1
GO_CellularComponent created 1
GO_MolecularFunction created 1
ReferenceSequence created 1
NegativePrecedingEventReason created 1
AbstractModifiedResidue created 1
ExternalOntology created 1
FailedReaction created 1
NegativeGeneExpressionRegulation created 1
FunctionalStatus created 1
ReferenceDNASequence created 1
NegativePrecedingEvent created 1
ReplacedResidue created 1
GO_BiologicalProcess created 1
DeletedControlledVocabulary created 1
ControlReference created 1
BlackBoxEvent created 1
Affiliation created 1
FragmentInsertionModification created 1
PositiveGeneExpressionRegulation created 1
ReferenceDatabase created 1
CandidateSet created 1
Regulation created 1
ProteinDrug created 1
Event created 1
FragmentModification created 1
IntraChainCrosslinkedResidue created 1
RetractionStatus created 1
OtherEntity created 1
RegulationReference created 1
Summation created 1
Disease created 1
FrontPage created 1
_Deleted created 1
Anatomy created 1
CatalystActivity created 1
Taxon created 1
Complex created 1
ReferenceGeneProduct created 1
TranslationalModification created 1
PhysicalEntityCellType created 1
Pathway created 1
ReferenceTherapeutic created 1
Publication created 1
EntityFunctionalStatus created 1
PathwayDiagram created 1
MarkerReference created 1
StableIdentifierHistory created 1
ReviewStatus created 1
FragmentReplacedModification created 1
Compartment created 1
Figure created 1
_UpdateTracker created 1
EntitySet created 1
CellLineagePath created 1
DrugActionType created 1
_Release created 1
ChemicalDrug created 1
Species created 1
PhysicalEntity created 1
Book created 1
DatabaseIdentifier created 1
DefinedSet created 1
NonsenseMutation created 1
ReactionlikeEvent created 1
_DeletedInstance created 1
ControlledVocabulary created 1
Polymerisation created 1
DatabaseObject created 1
PositiveRegulation created 1
EvidenceType created 1
PsiMod created 1
CellDevelopmentStep created 1
CrosslinkedResidue created 1
ReferenceIsoform created 1
ReferenceMolecule created 1
InstanceEdit created 1
ReactionType created 1
FunctionalStatusType created 1
Depolymerisation created 1
GeneticallyModifiedResidue created 1
Polymer created 1
Requirement created 1
RNADrug created 1
ModifiedResidue created 1
EntityWithAccessionedSequence created 1
Drug created 1
ReferenceRNASequence created 1
GenomeEncodedEntity created 1
GroupModifiedResidue created 1
FragmentDeletionModification created 1
URL created 1
ModifiedNucleotide created 1
DefinedSet authored 1
ReactionlikeEvent authored +
FailedReaction authored +
Reaction authored +
PhysicalEntity authored 1
ChemicalDrug authored 1
Cell authored 1
GenomeEncodedEntity authored 1
OtherEntity authored 1
Drug authored 1
CellLineagePath authored +
EntitySet authored 1
EntityWithAccessionedSequence authored 1
RNADrug authored 1
Event authored +
Polymer authored 1
Depolymerisation authored +
InteractionEvent authored +
ProteinDrug authored 1
CandidateSet authored 1
CellDevelopmentStep authored +
BlackBoxEvent authored +
Pathway authored +
Complex authored 1
SimpleEntity authored 1
Polymerisation authored +
RNADrug revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
Drug revised +
OtherEntity revised +
PhysicalEntity revised +
ChemicalDrug revised +
Cell revised +
GenomeEncodedEntity revised +
Reaction revised +
FailedReaction revised +
DefinedSet revised +
ReactionlikeEvent revised +
SimpleEntity revised +
Polymerisation revised +
Complex revised +
Pathway revised +
CellDevelopmentStep revised +
BlackBoxEvent revised +
Depolymerisation revised +
ProteinDrug revised +
InteractionEvent revised +
CandidateSet revised +
Event revised +
Polymer revised +
CellDevelopmentStep structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
Pathway structureModified +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
EntitySet reviewed +
RNADrug reviewed +
OtherEntity reviewed +
Drug reviewed +
Reaction reviewed +
GenomeEncodedEntity reviewed +
Cell reviewed +
ChemicalDrug reviewed +
PhysicalEntity reviewed +
ReactionlikeEvent reviewed +
DefinedSet reviewed +
FailedReaction reviewed +
Polymerisation reviewed +
SimpleEntity reviewed +
Pathway reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
Event reviewed +
Depolymerisation reviewed +
InteractionEvent reviewed +
ProteinDrug reviewed +
CandidateSet reviewed +
_Deleted replacementInstances +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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