Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ProteinDrug revised +
ReactionlikeEvent revised +
RNADrug revised +
GenomeEncodedEntity revised +
Reaction revised +
ChemicalDrug revised +
Cell revised +
InteractionEvent revised +
EntitySet revised +
CellDevelopmentStep revised +
Event revised +
SimpleEntity revised +
Complex revised +
Drug revised +
CandidateSet revised +
Polymer revised +
OtherEntity revised +
DefinedSet revised +
Depolymerisation revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
Pathway revised +
Polymerisation revised +
CellLineagePath revised +
PhysicalEntity revised +
FailedReaction revised +
Publication modified +
Drug modified +
ReferenceDatabase modified +
ReferenceRNASequence modified +
SimpleEntity modified +
Polymer modified +
ControlledVocabulary modified +
Species modified +
Anatomy modified +
CrosslinkedResidue modified +
Depolymerisation modified +
FunctionalStatus modified +
CellLineagePath modified +
PhysicalEntity modified +
Polymerisation modified +
ReferenceDNASequence modified +
URL modified +
RNADrug modified +
Summation modified +
ReferenceEntity modified +
_DeletedInstance modified +
Reaction modified +
IntraChainCrosslinkedResidue modified +
ReferenceSequence modified +
CellDevelopmentStep modified +
ReactionType modified +
Compartment modified +
NonsenseMutation modified +
ReplacedResidue modified +
CandidateSet modified +
Event modified +
GO_MolecularFunction modified +
FragmentDeletionModification modified +
ReferenceIsoform modified +
PositiveRegulation modified +
DatabaseObject modified +
ExternalOntology modified +
ModifiedResidue modified +
FragmentInsertionModification modified +
PathwayDiagram modified +
Pathway modified +
StableIdentifier modified +
Book modified +
NegativeGeneExpressionRegulation modified +
AbstractModifiedResidue modified +
_Deleted modified +
RetractionStatus modified +
Regulation modified +
RegulationReference modified +
Cell modified +
InstanceEdit modified +
SequenceOntology modified +
ControlReference modified +
GroupModifiedResidue modified +
Person modified +
DrugActionType modified +
LiteratureReference modified +
BlackBoxEvent modified +
GeneticallyModifiedResidue modified +
DatabaseIdentifier modified +
ReferenceTherapeutic modified +
ReferenceGeneProduct modified +
FragmentReplacedModification modified +
Taxon modified +
CatalystActivity modified +
StableIdentifierReleaseStatus modified +
GO_CellularComponent modified +
FragmentModification modified +
ChemicalDrug modified +
_UpdateTracker modified +
Figure modified +
EntitySet modified +
NegativeRegulation modified +
Affiliation modified +
Complex modified +
PsiMod modified +
ModifiedNucleotide modified +
FunctionalStatusType modified +
_Release modified +
Requirement modified +
StableIdentifierHistory modified +
PositiveGeneExpressionRegulation modified +
EntityWithAccessionedSequence modified +
DeletedControlledVocabulary modified +
ReferenceGroup modified +
OtherEntity modified +
DefinedSet modified +
CatalystActivityReference modified +
ReferenceMolecule modified +
PhysicalEntityCellType modified +
TranscriptionalModification modified +
FailedReaction modified +
ReviewStatus modified +
ReactionlikeEvent modified +
CellType modified +
EvidenceType modified +
Disease modified +
NegativePrecedingEventReason modified +
ProteinDrug modified +
FrontPage modified +
GO_BiologicalProcess modified +
GenomeEncodedEntity modified +
TranslationalModification modified +
MarkerReference modified +
InteractionEvent modified +
EntityFunctionalStatus modified +
InterChainCrosslinkedResidue modified +
NegativePrecedingEvent modified +
CellDevelopmentStep created 1
ReferenceSequence created 1
ReplacedResidue created 1
NonsenseMutation created 1
Compartment created 1
ReactionType created 1
IntraChainCrosslinkedResidue created 1
Reaction created 1
Summation created 1
_DeletedInstance created 1
ReferenceEntity created 1
RNADrug created 1
PhysicalEntity created 1
FunctionalStatus created 1
CellLineagePath created 1
URL created 1
ReferenceDNASequence created 1
Polymerisation created 1
Species created 1
Depolymerisation created 1
CrosslinkedResidue created 1
Anatomy created 1
Polymer created 1
ControlledVocabulary created 1
Drug created 1
Publication created 1
ReferenceRNASequence created 1
SimpleEntity created 1
ReferenceDatabase created 1
SequenceOntology created 1
InstanceEdit created 1
Cell created 1
RegulationReference created 1
Book created 1
RetractionStatus created 1
Regulation created 1
AbstractModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
_Deleted created 1
PathwayDiagram created 1
StableIdentifier created 1
Pathway created 1
DatabaseObject created 1
ExternalOntology created 1
ReferenceIsoform created 1
PositiveRegulation created 1
FragmentInsertionModification created 1
ModifiedResidue created 1
CandidateSet created 1
FragmentDeletionModification created 1
GO_MolecularFunction created 1
Event created 1
EntitySet created 1
Figure created 1
Affiliation created 1
NegativeRegulation created 1
_UpdateTracker created 1
ChemicalDrug created 1
FragmentModification created 1
GO_CellularComponent created 1
StableIdentifierReleaseStatus created 1
CatalystActivity created 1
ReferenceGeneProduct created 1
Taxon created 1
FragmentReplacedModification created 1
BlackBoxEvent created 1
GeneticallyModifiedResidue created 1
ReferenceTherapeutic created 1
DatabaseIdentifier created 1
Person created 1
LiteratureReference created 1
DrugActionType created 1
GroupModifiedResidue created 1
ControlReference created 1
InterChainCrosslinkedResidue created 1
NegativePrecedingEvent created 1
InteractionEvent created 1
EntityFunctionalStatus created 1
TranslationalModification created 1
GO_BiologicalProcess created 1
GenomeEncodedEntity created 1
MarkerReference created 1
EvidenceType created 1
CellType created 1
ReactionlikeEvent created 1
FrontPage created 1
ProteinDrug created 1
Disease created 1
NegativePrecedingEventReason created 1
FailedReaction created 1
ReviewStatus created 1
TranscriptionalModification created 1
PhysicalEntityCellType created 1
DeletedControlledVocabulary created 1
ReferenceGroup created 1
EntityWithAccessionedSequence created 1
OtherEntity created 1
ReferenceMolecule created 1
DefinedSet created 1
CatalystActivityReference created 1
Requirement created 1
PositiveGeneExpressionRegulation created 1
StableIdentifierHistory created 1
PsiMod created 1
ModifiedNucleotide created 1
FunctionalStatusType created 1
Complex created 1
_Release created 1
_Deleted replacementInstances +
CellDevelopmentStep edited +
EntitySet edited +
Cell edited +
ChemicalDrug edited +
InteractionEvent edited +
Reaction edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
RNADrug edited +
ProteinDrug edited +
CellLineagePath edited +
FailedReaction edited +
PhysicalEntity edited +
Pathway edited +
Polymerisation edited +
BlackBoxEvent edited +
EntityWithAccessionedSequence edited +
DefinedSet edited +
OtherEntity edited +
Depolymerisation edited +
Polymer edited +
Complex edited +
CandidateSet edited +
Drug edited +
Event edited +
SimpleEntity edited +
Polymerisation structureModified +
Pathway structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Reaction structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
GenomeEncodedEntity authored 1
ProteinDrug authored 1
RNADrug authored 1
ReactionlikeEvent authored +
EntitySet authored 1
CellDevelopmentStep authored +
Reaction authored +
InteractionEvent authored +
Cell authored 1
ChemicalDrug authored 1
Polymer authored 1
SimpleEntity authored 1
Event authored +
Drug authored 1
CandidateSet authored 1
Complex authored 1
Pathway authored +
Polymerisation authored +
PhysicalEntity authored 1
FailedReaction authored +
CellLineagePath authored +
Depolymerisation authored +
OtherEntity authored 1
DefinedSet authored 1
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
CellDevelopmentStep reviewed +
EntitySet reviewed +
Cell reviewed +
ChemicalDrug reviewed +
InteractionEvent reviewed +
Reaction reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
RNADrug reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
Pathway reviewed +
Polymerisation reviewed +
BlackBoxEvent reviewed +
EntityWithAccessionedSequence reviewed +
OtherEntity reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
Polymer reviewed +
Complex reviewed +
Drug reviewed +
CandidateSet reviewed +
Event reviewed +
SimpleEntity reviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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