Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Depolymerisation internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Pathway authored +
OtherEntity authored 1
Polymer authored 1
DefinedSet authored 1
Event authored +
EntitySet authored 1
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
CellLineagePath authored +
CandidateSet authored 1
ProteinDrug authored 1
Cell authored 1
Polymerisation authored +
Depolymerisation authored +
InteractionEvent authored +
EntityWithAccessionedSequence authored 1
Drug authored 1
PhysicalEntity authored 1
Reaction authored +
Complex authored 1
FailedReaction authored +
RNADrug authored 1
BlackBoxEvent authored +
CellDevelopmentStep authored +
SimpleEntity authored 1
ChemicalDrug authored 1
_Deleted replacementInstances +
Polymerisation structureModified +
Pathway structureModified +
Depolymerisation structureModified +
Event structureModified +
Reaction structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
ChemicalDrug edited +
SimpleEntity edited +
BlackBoxEvent edited +
CellDevelopmentStep edited +
FailedReaction edited +
RNADrug edited +
PhysicalEntity edited +
Reaction edited +
Complex edited +
Drug edited +
EntityWithAccessionedSequence edited +
InteractionEvent edited +
Depolymerisation edited +
Polymerisation edited +
ProteinDrug edited +
Cell edited +
CandidateSet edited +
ReactionlikeEvent edited +
CellLineagePath edited +
GenomeEncodedEntity edited +
EntitySet edited +
Event edited +
DefinedSet edited +
Polymer edited +
Pathway edited +
OtherEntity edited +
Depolymerisation reviewed +
Polymerisation reviewed +
ChemicalDrug reviewed +
SimpleEntity reviewed +
RNADrug reviewed +
FailedReaction reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
Drug reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
Reaction reviewed +
Complex reviewed +
InteractionEvent reviewed +
EntitySet reviewed +
Event reviewed +
Polymer reviewed +
DefinedSet reviewed +
Pathway reviewed +
OtherEntity reviewed +
ProteinDrug reviewed +
Cell reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
CellLineagePath reviewed +
InteractionEvent revised +
Reaction revised +
PhysicalEntity revised +
Complex revised +
Drug revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
CellDevelopmentStep revised +
FailedReaction revised +
RNADrug revised +
SimpleEntity revised +
ChemicalDrug revised +
Polymerisation revised +
Depolymerisation revised +
ReactionlikeEvent revised +
CellLineagePath revised +
GenomeEncodedEntity revised +
CandidateSet revised +
ProteinDrug revised +
Cell revised +
OtherEntity revised +
Pathway revised +
DefinedSet revised +
Polymer revised +
Event revised +
EntitySet revised +
Disease created 1
ReferenceGroup created 1
RegulationReference created 1
PhysicalEntity created 1
ControlledVocabulary created 1
Figure created 1
StableIdentifierReleaseStatus created 1
_Deleted created 1
ReferenceIsoform created 1
GO_CellularComponent created 1
ReactionlikeEvent created 1
GroupModifiedResidue created 1
NegativeRegulation created 1
FragmentReplacedModification created 1
Cell created 1
ReactionType created 1
OtherEntity created 1
Pathway created 1
Publication created 1
PsiMod created 1
_Release created 1
DatabaseIdentifier created 1
Anatomy created 1
CrosslinkedResidue created 1
EvidenceType created 1
ReferenceMolecule created 1
DatabaseObject created 1
ModifiedNucleotide created 1
ReferenceGeneProduct created 1
ControlReference created 1
Requirement created 1
IntraChainCrosslinkedResidue created 1
GO_BiologicalProcess created 1
PositiveRegulation created 1
GenomeEncodedEntity created 1
CellType created 1
CandidateSet created 1
SequenceOntology created 1
ReferenceDatabase created 1
NegativePrecedingEventReason created 1
TranslationalModification created 1
FunctionalStatusType created 1
PositiveGeneExpressionRegulation created 1
TranscriptionalModification created 1
InstanceEdit created 1
GeneticallyModifiedResidue created 1
DeletedControlledVocabulary created 1
NonsenseMutation created 1
RetractionStatus created 1
Polymer created 1
Species created 1
_UpdateTracker created 1
NegativeGeneExpressionRegulation created 1
Event created 1
StableIdentifier created 1
Complex created 1
Reaction created 1
Drug created 1
CellDevelopmentStep created 1
ReferenceSequence created 1
PathwayDiagram created 1
SimpleEntity created 1
Compartment created 1
Book created 1
StableIdentifierHistory created 1
GO_MolecularFunction created 1
_DeletedInstance created 1
Person created 1
ReferenceTherapeutic created 1
FragmentInsertionModification created 1
Taxon created 1
FrontPage created 1
FragmentDeletionModification created 1
ProteinDrug created 1
FunctionalStatus created 1
CatalystActivity created 1
ReferenceRNASequence created 1
DefinedSet created 1
Regulation created 1
DrugActionType created 1
InteractionEvent created 1
InterChainCrosslinkedResidue created 1
Summation created 1
PhysicalEntityCellType created 1
MarkerReference created 1
EntityWithAccessionedSequence created 1
ReviewStatus created 1
BlackBoxEvent created 1
FailedReaction created 1
RNADrug created 1
ReferenceDNASequence created 1
ChemicalDrug created 1
CatalystActivityReference created 1
Polymerisation created 1
ExternalOntology created 1
ReferenceEntity created 1
Depolymerisation created 1
FragmentModification created 1
AbstractModifiedResidue created 1
URL created 1
CellLineagePath created 1
NegativePrecedingEvent created 1
Affiliation created 1
ModifiedResidue created 1
EntityFunctionalStatus created 1
ReplacedResidue created 1
LiteratureReference created 1
EntitySet created 1
CellLineagePath modified +
NegativePrecedingEvent modified +
Affiliation modified +
ModifiedResidue modified +
ReplacedResidue modified +
EntityFunctionalStatus modified +
LiteratureReference modified +
EntitySet modified +
InterChainCrosslinkedResidue modified +
InteractionEvent modified +
Summation modified +
PhysicalEntityCellType modified +
ReviewStatus modified +
EntityWithAccessionedSequence modified +
MarkerReference modified +
BlackBoxEvent modified +
RNADrug modified +
FailedReaction modified +
ChemicalDrug modified +
ReferenceDNASequence modified +
CatalystActivityReference modified +
Polymerisation modified +
ReferenceEntity modified +
ExternalOntology modified +
FragmentModification modified +
Depolymerisation modified +
AbstractModifiedResidue modified +
URL modified +
FrontPage modified +
FragmentDeletionModification modified +
ProteinDrug modified +
FunctionalStatus modified +
CatalystActivity modified +
ReferenceRNASequence modified +
DefinedSet modified +
Regulation modified +
DrugActionType modified +
Reaction modified +
StableIdentifier modified +
Complex modified +
Drug modified +
CellDevelopmentStep modified +
ReferenceSequence modified +
SimpleEntity modified +
PathwayDiagram modified +
Compartment modified +
Book modified +
StableIdentifierHistory modified +
GO_MolecularFunction modified +
_DeletedInstance modified +
Person modified +
ReferenceTherapeutic modified +
FragmentInsertionModification modified +
Taxon modified +
PositiveRegulation modified +
GO_BiologicalProcess modified +
GenomeEncodedEntity modified +
CellType modified +
CandidateSet modified +
SequenceOntology modified +
ReferenceDatabase modified +
NegativePrecedingEventReason modified +
TranslationalModification modified +
FunctionalStatusType modified +
PositiveGeneExpressionRegulation modified +
TranscriptionalModification modified +
DeletedControlledVocabulary modified +
InstanceEdit modified +
GeneticallyModifiedResidue modified +
NonsenseMutation modified +
RetractionStatus modified +
Polymer modified +
Species modified +
_UpdateTracker modified +
NegativeGeneExpressionRegulation modified +
Event modified +
Anatomy modified +
CrosslinkedResidue modified +
EvidenceType modified +
ReferenceMolecule modified +
DatabaseObject modified +
ModifiedNucleotide modified +
ReferenceGeneProduct modified +
ControlReference modified +
IntraChainCrosslinkedResidue modified +
Requirement modified +
ReactionlikeEvent modified +
GroupModifiedResidue modified +
NegativeRegulation modified +
FragmentReplacedModification modified +
Cell modified +
ReactionType modified +
Publication modified +
OtherEntity modified +
Pathway modified +
PsiMod modified +
_Release modified +
DatabaseIdentifier modified +
ReferenceGroup modified +
Disease modified +
RegulationReference modified +
PhysicalEntity modified +
ControlledVocabulary modified +
Figure modified +
StableIdentifierReleaseStatus modified +
_Deleted modified +
ReferenceIsoform modified +
GO_CellularComponent modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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