Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
FailedReaction authored +
PhysicalEntity authored 1
Polymerisation authored +
CellLineagePath authored +
GenomeEncodedEntity authored 1
InteractionEvent authored +
Depolymerisation authored +
Cell authored 1
CellDevelopmentStep authored +
ProteinDrug authored 1
ReactionlikeEvent authored +
SimpleEntity authored 1
Polymer authored 1
BlackBoxEvent authored +
CandidateSet authored 1
Event authored +
Complex authored 1
EntityWithAccessionedSequence authored 1
Pathway authored +
DefinedSet authored 1
OtherEntity authored 1
Reaction authored +
Drug authored 1
ChemicalDrug authored 1
EntitySet authored 1
RNADrug authored 1
ChemicalDrug revised +
RNADrug revised +
EntitySet revised +
OtherEntity revised +
DefinedSet revised +
Pathway revised +
EntityWithAccessionedSequence revised +
Drug revised +
Reaction revised +
BlackBoxEvent revised +
Polymer revised +
SimpleEntity revised +
ReactionlikeEvent revised +
Complex revised +
Event revised +
CandidateSet revised +
GenomeEncodedEntity revised +
CellLineagePath revised +
Polymerisation revised +
PhysicalEntity revised +
FailedReaction revised +
ProteinDrug revised +
CellDevelopmentStep revised +
Cell revised +
Depolymerisation revised +
InteractionEvent revised +
Figure modified +
EntitySet modified +
NegativePrecedingEventReason modified +
GroupModifiedResidue modified +
Summation modified +
CrosslinkedResidue modified +
Reaction modified +
PositiveRegulation modified +
GO_CellularComponent modified +
AbstractModifiedResidue modified +
DrugActionType modified +
ReferenceDatabase modified +
Affiliation modified +
Pathway modified +
EntityWithAccessionedSequence modified +
Person modified +
StableIdentifierReleaseStatus modified +
PositiveGeneExpressionRegulation modified +
ReferenceEntity modified +
ReviewStatus modified +
TranslationalModification modified +
CellDevelopmentStep modified +
ExternalOntology modified +
StableIdentifierHistory modified +
FragmentInsertionModification modified +
Polymerisation modified +
PhysicalEntity modified +
FailedReaction modified +
RNADrug modified +
FrontPage modified +
FragmentReplacedModification modified +
FunctionalStatus modified +
ReferenceSequence modified +
_UpdateTracker modified +
ReferenceMolecule modified +
DatabaseObject modified +
Drug modified +
DeletedControlledVocabulary modified +
NonsenseMutation modified +
CandidateSet modified +
SequenceOntology modified +
PathwayDiagram modified +
BlackBoxEvent modified +
Book modified +
_Deleted modified +
Cell modified +
Depolymerisation modified +
InteractionEvent modified +
CellLineagePath modified +
MarkerReference modified +
Disease modified +
ModifiedResidue modified +
PsiMod modified +
_Release modified +
InstanceEdit modified +
ReplacedResidue modified +
IntraChainCrosslinkedResidue modified +
ChemicalDrug modified +
URL modified +
Taxon modified +
OtherEntity modified +
Requirement modified +
StableIdentifier modified +
Species modified +
Complex modified +
DatabaseIdentifier modified +
CatalystActivity modified +
Compartment modified +
Polymer modified +
PhysicalEntityCellType modified +
SimpleEntity modified +
GO_BiologicalProcess modified +
CatalystActivityReference modified +
ReactionlikeEvent modified +
Publication modified +
RegulationReference modified +
NegativePrecedingEvent modified +
ReferenceRNASequence modified +
TranscriptionalModification modified +
CellType modified +
ControlReference modified +
ReferenceIsoform modified +
_DeletedInstance modified +
ModifiedNucleotide modified +
RetractionStatus modified +
DefinedSet modified +
FragmentModification modified +
GO_MolecularFunction modified +
Event modified +
FragmentDeletionModification modified +
GeneticallyModifiedResidue modified +
ReferenceTherapeutic modified +
Anatomy modified +
LiteratureReference modified +
EntityFunctionalStatus modified +
ReactionType modified +
ReferenceDNASequence modified +
ReferenceGroup modified +
ReferenceGeneProduct modified +
ProteinDrug modified +
FunctionalStatusType modified +
ControlledVocabulary modified +
GenomeEncodedEntity modified +
EvidenceType modified +
InterChainCrosslinkedResidue modified +
NegativeGeneExpressionRegulation modified +
Regulation modified +
NegativeRegulation modified +
EntitySet reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
Reaction reviewed +
Drug reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
DefinedSet reviewed +
OtherEntity reviewed +
CandidateSet reviewed +
Event reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
SimpleEntity reviewed +
Polymer reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
InteractionEvent reviewed +
Cell reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
Polymerisation reviewed +
GenomeEncodedEntity reviewed +
CellLineagePath reviewed +
ProteinDrug edited +
CellDevelopmentStep edited +
Cell edited +
InteractionEvent edited +
Depolymerisation edited +
CellLineagePath edited +
GenomeEncodedEntity edited +
Polymerisation edited +
FailedReaction edited +
PhysicalEntity edited +
Complex edited +
Event edited +
CandidateSet edited +
BlackBoxEvent edited +
Polymer edited +
SimpleEntity edited +
ReactionlikeEvent edited +
Drug edited +
Reaction edited +
OtherEntity edited +
DefinedSet edited +
Pathway edited +
EntityWithAccessionedSequence edited +
RNADrug edited +
EntitySet edited +
ChemicalDrug edited +
_Deleted replacementInstances +
Event structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
Pathway structureModified +
Polymerisation structureModified +
ReferenceDatabase created 1
EntityWithAccessionedSequence created 1
Affiliation created 1
Pathway created 1
PositiveRegulation created 1
GO_CellularComponent created 1
AbstractModifiedResidue created 1
DrugActionType created 1
CrosslinkedResidue created 1
Reaction created 1
Summation created 1
NegativePrecedingEventReason created 1
GroupModifiedResidue created 1
EntitySet created 1
Figure created 1
Polymerisation created 1
FailedReaction created 1
PhysicalEntity created 1
FragmentInsertionModification created 1
CellDevelopmentStep created 1
StableIdentifierHistory created 1
ExternalOntology created 1
ReferenceEntity created 1
ReviewStatus created 1
TranslationalModification created 1
Person created 1
PositiveGeneExpressionRegulation created 1
StableIdentifierReleaseStatus created 1
DeletedControlledVocabulary created 1
Drug created 1
DatabaseObject created 1
FunctionalStatus created 1
ReferenceSequence created 1
_UpdateTracker created 1
ReferenceMolecule created 1
FrontPage created 1
FragmentReplacedModification created 1
RNADrug created 1
ModifiedResidue created 1
MarkerReference created 1
CellLineagePath created 1
Disease created 1
Cell created 1
Depolymerisation created 1
InteractionEvent created 1
_Deleted created 1
Book created 1
PathwayDiagram created 1
BlackBoxEvent created 1
CandidateSet created 1
SequenceOntology created 1
NonsenseMutation created 1
StableIdentifier created 1
OtherEntity created 1
Requirement created 1
Taxon created 1
ChemicalDrug created 1
URL created 1
ReplacedResidue created 1
IntraChainCrosslinkedResidue created 1
_Release created 1
PsiMod created 1
InstanceEdit created 1
NegativePrecedingEvent created 1
RegulationReference created 1
Publication created 1
GO_BiologicalProcess created 1
SimpleEntity created 1
CatalystActivityReference created 1
ReactionlikeEvent created 1
PhysicalEntityCellType created 1
Polymer created 1
CatalystActivity created 1
Compartment created 1
DatabaseIdentifier created 1
Complex created 1
Species created 1
DefinedSet created 1
RetractionStatus created 1
ModifiedNucleotide created 1
_DeletedInstance created 1
ReferenceIsoform created 1
ControlReference created 1
ReferenceRNASequence created 1
TranscriptionalModification created 1
CellType created 1
NegativeRegulation created 1
EvidenceType created 1
GenomeEncodedEntity created 1
NegativeGeneExpressionRegulation created 1
InterChainCrosslinkedResidue created 1
Regulation created 1
ControlledVocabulary created 1
FunctionalStatusType created 1
ProteinDrug created 1
ReactionType created 1
ReferenceDNASequence created 1
ReferenceGroup created 1
ReferenceGeneProduct created 1
FragmentDeletionModification created 1
GeneticallyModifiedResidue created 1
ReferenceTherapeutic created 1
EntityFunctionalStatus created 1
Anatomy created 1
LiteratureReference created 1
GO_MolecularFunction created 1
FragmentModification created 1
Event created 1
Polymerisation internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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