Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymer authored 1
EntityWithAccessionedSequence authored 1
Pathway authored +
Drug authored 1
CellDevelopmentStep authored +
PhysicalEntity authored 1
ChemicalDrug authored 1
Reaction authored +
SimpleEntity authored 1
FailedReaction authored +
EntitySet authored 1
DefinedSet authored 1
Depolymerisation authored +
BlackBoxEvent authored +
Event authored +
OtherEntity authored 1
RNADrug authored 1
InteractionEvent authored +
CellLineagePath authored +
ProteinDrug authored 1
Complex authored 1
ReactionlikeEvent authored +
Cell authored 1
Polymerisation authored +
CandidateSet authored 1
GenomeEncodedEntity authored 1
FailedReaction reviewed +
SimpleEntity reviewed +
Reaction reviewed +
PhysicalEntity reviewed +
ChemicalDrug reviewed +
Drug reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
CellDevelopmentStep reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
Complex reviewed +
Cell reviewed +
ReactionlikeEvent reviewed +
RNADrug reviewed +
OtherEntity reviewed +
CellLineagePath reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
DefinedSet reviewed +
EntitySet reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
Event reviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
Polymerisation structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Event structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
_Deleted replacementInstances +
DatabaseObject modified +
RetractionStatus modified +
Disease modified +
NegativePrecedingEventReason modified +
StableIdentifier modified +
Pathway modified +
FunctionalStatus modified +
Anatomy modified +
FragmentModification modified +
_Deleted modified +
TranslationalModification modified +
FragmentReplacedModification modified +
EntityFunctionalStatus modified +
DefinedSet modified +
GO_BiologicalProcess modified +
Person modified +
Regulation modified +
StableIdentifierHistory modified +
FragmentInsertionModification modified +
ReactionlikeEvent modified +
FrontPage modified +
CrosslinkedResidue modified +
Summation modified +
NegativePrecedingEvent modified +
ReferenceIsoform modified +
DeletedControlledVocabulary modified +
Compartment modified +
EvidenceType modified +
ModifiedNucleotide modified +
Reaction modified +
ChemicalDrug modified +
IntraChainCrosslinkedResidue modified +
LiteratureReference modified +
Event modified +
ControlledVocabulary modified +
GroupModifiedResidue modified +
ReferenceGroup modified +
OtherEntity modified +
ProteinDrug modified +
Book modified +
GO_CellularComponent modified +
FragmentDeletionModification modified +
Species modified +
InterChainCrosslinkedResidue modified +
ReferenceEntity modified +
GenomeEncodedEntity modified +
ReplacedResidue modified +
CatalystActivity modified +
PathwayDiagram modified +
CatalystActivityReference modified +
NonsenseMutation modified +
Drug modified +
_DeletedInstance modified +
Taxon modified +
PhysicalEntityCellType modified +
DrugActionType modified +
GO_MolecularFunction modified +
GeneticallyModifiedResidue modified +
PhysicalEntity modified +
DatabaseIdentifier modified +
NegativeRegulation modified +
ReferenceTherapeutic modified +
CellType modified +
BlackBoxEvent modified +
ControlReference modified +
Depolymerisation modified +
SequenceOntology modified +
ReferenceRNASequence modified +
RNADrug modified +
CellLineagePath modified +
InteractionEvent modified +
Affiliation modified +
PsiMod modified +
FunctionalStatusType modified +
Figure modified +
ReferenceDNASequence modified +
Polymerisation modified +
TranscriptionalModification modified +
Polymer modified +
_UpdateTracker modified +
RegulationReference modified +
InstanceEdit modified +
Publication modified +
NegativeGeneExpressionRegulation modified +
EntityWithAccessionedSequence modified +
PositiveGeneExpressionRegulation modified +
ModifiedResidue modified +
CellDevelopmentStep modified +
ReactionType modified +
ReviewStatus modified +
_Release modified +
ReferenceGeneProduct modified +
FailedReaction modified +
SimpleEntity modified +
AbstractModifiedResidue modified +
ReferenceSequence modified +
EntitySet modified +
MarkerReference modified +
URL modified +
Requirement modified +
ReferenceMolecule modified +
PositiveRegulation modified +
Complex modified +
Cell modified +
ReferenceDatabase modified +
CandidateSet modified +
StableIdentifierReleaseStatus modified +
ExternalOntology modified +
EvidenceType created 1
Compartment created 1
DeletedControlledVocabulary created 1
IntraChainCrosslinkedResidue created 1
ChemicalDrug created 1
Reaction created 1
ModifiedNucleotide created 1
ProteinDrug created 1
ReferenceGroup created 1
OtherEntity created 1
ControlledVocabulary created 1
GroupModifiedResidue created 1
Event created 1
LiteratureReference created 1
CatalystActivity created 1
ReplacedResidue created 1
GenomeEncodedEntity created 1
ReferenceEntity created 1
InterChainCrosslinkedResidue created 1
FragmentDeletionModification created 1
GO_CellularComponent created 1
Species created 1
Book created 1
FunctionalStatus created 1
Pathway created 1
NegativePrecedingEventReason created 1
Disease created 1
StableIdentifier created 1
RetractionStatus created 1
DatabaseObject created 1
TranslationalModification created 1
_Deleted created 1
FragmentModification created 1
Anatomy created 1
GO_BiologicalProcess created 1
EntityFunctionalStatus created 1
FragmentReplacedModification created 1
DefinedSet created 1
NegativePrecedingEvent created 1
ReferenceIsoform created 1
Summation created 1
CrosslinkedResidue created 1
FrontPage created 1
ReactionlikeEvent created 1
FragmentInsertionModification created 1
Regulation created 1
StableIdentifierHistory created 1
Person created 1
ReviewStatus created 1
ReactionType created 1
ModifiedResidue created 1
CellDevelopmentStep created 1
PositiveGeneExpressionRegulation created 1
EntityWithAccessionedSequence created 1
NegativeGeneExpressionRegulation created 1
Publication created 1
InstanceEdit created 1
RegulationReference created 1
_UpdateTracker created 1
Polymer created 1
SimpleEntity created 1
FailedReaction created 1
_Release created 1
ReferenceGeneProduct created 1
Requirement created 1
URL created 1
EntitySet created 1
MarkerReference created 1
ReferenceSequence created 1
AbstractModifiedResidue created 1
StableIdentifierReleaseStatus created 1
ExternalOntology created 1
CandidateSet created 1
ReferenceDatabase created 1
Cell created 1
Complex created 1
ReferenceMolecule created 1
PositiveRegulation created 1
PhysicalEntityCellType created 1
_DeletedInstance created 1
Taxon created 1
NonsenseMutation created 1
Drug created 1
CatalystActivityReference created 1
PathwayDiagram created 1
ReferenceTherapeutic created 1
PhysicalEntity created 1
DatabaseIdentifier created 1
NegativeRegulation created 1
GeneticallyModifiedResidue created 1
GO_MolecularFunction created 1
DrugActionType created 1
InteractionEvent created 1
CellLineagePath created 1
ReferenceRNASequence created 1
RNADrug created 1
SequenceOntology created 1
BlackBoxEvent created 1
ControlReference created 1
Depolymerisation created 1
CellType created 1
TranscriptionalModification created 1
Polymerisation created 1
Figure created 1
FunctionalStatusType created 1
PsiMod created 1
ReferenceDNASequence created 1
Affiliation created 1
Complex edited +
ReactionlikeEvent edited +
Cell edited +
CandidateSet edited +
Polymerisation edited +
GenomeEncodedEntity edited +
EntitySet edited +
DefinedSet edited +
BlackBoxEvent edited +
Event edited +
Depolymerisation edited +
OtherEntity edited +
RNADrug edited +
InteractionEvent edited +
ProteinDrug edited +
CellLineagePath edited +
ChemicalDrug edited +
PhysicalEntity edited +
Reaction edited +
SimpleEntity edited +
FailedReaction edited +
Polymer edited +
EntityWithAccessionedSequence edited +
Pathway edited +
Drug edited +
CellDevelopmentStep edited +
ReactionlikeEvent revised +
Cell revised +
Complex revised +
Polymerisation revised +
CandidateSet revised +
GenomeEncodedEntity revised +
Event revised +
BlackBoxEvent revised +
Depolymerisation revised +
EntitySet revised +
DefinedSet revised +
InteractionEvent revised +
CellLineagePath revised +
ProteinDrug revised +
OtherEntity revised +
RNADrug revised +
PhysicalEntity revised +
ChemicalDrug revised +
Reaction revised +
SimpleEntity revised +
FailedReaction revised +
Polymer revised +
CellDevelopmentStep revised +
Pathway revised +
EntityWithAccessionedSequence revised +
Drug revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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