Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
EntitySet authored 1
CellDevelopmentStep authored +
ReactionlikeEvent authored +
FailedReaction authored +
RNADrug authored 1
Pathway authored +
Cell authored 1
ChemicalDrug authored 1
Reaction authored +
DefinedSet authored 1
InteractionEvent authored +
PhysicalEntity authored 1
CandidateSet authored 1
Polymer authored 1
CellLineagePath authored +
Drug authored 1
Complex authored 1
ProteinDrug authored 1
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
GenomeEncodedEntity authored 1
SimpleEntity authored 1
Depolymerisation authored +
OtherEntity authored 1
Event authored +
Polymerisation authored +
Event reviewed +
SimpleEntity reviewed +
Depolymerisation reviewed +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
Polymerisation reviewed +
Complex reviewed +
ProteinDrug reviewed +
Drug reviewed +
CellLineagePath reviewed +
Polymer reviewed +
EntityWithAccessionedSequence reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
Cell reviewed +
CandidateSet reviewed +
PhysicalEntity reviewed +
DefinedSet reviewed +
InteractionEvent reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
EntitySet reviewed +
Pathway reviewed +
RNADrug reviewed +
FailedReaction reviewed +
EntityWithAccessionedSequence edited +
Drug edited +
CellLineagePath edited +
Polymer edited +
Complex edited +
ProteinDrug edited +
Polymerisation edited +
GenomeEncodedEntity edited +
BlackBoxEvent edited +
Event edited +
Depolymerisation edited +
OtherEntity edited +
SimpleEntity edited +
RNADrug edited +
FailedReaction edited +
Pathway edited +
EntitySet edited +
ReactionlikeEvent edited +
CellDevelopmentStep edited +
DefinedSet edited +
InteractionEvent edited +
PhysicalEntity edited +
CandidateSet edited +
ChemicalDrug edited +
Cell edited +
Reaction edited +
InteractionEvent structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
Event structureModified +
Reaction structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Pathway structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Complex revised +
ProteinDrug revised +
CellLineagePath revised +
Polymer revised +
Drug revised +
EntityWithAccessionedSequence revised +
OtherEntity revised +
Depolymerisation revised +
SimpleEntity revised +
Event revised +
BlackBoxEvent revised +
GenomeEncodedEntity revised +
Polymerisation revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
EntitySet revised +
Pathway revised +
RNADrug revised +
FailedReaction revised +
Reaction revised +
Cell revised +
ChemicalDrug revised +
CandidateSet revised +
InteractionEvent revised +
DefinedSet revised +
PhysicalEntity revised +
DatabaseIdentifier created 1
_Deleted created 1
Affiliation created 1
_DeletedInstance created 1
Reaction created 1
Summation created 1
LiteratureReference created 1
ReferenceDNASequence created 1
GroupModifiedResidue created 1
GO_BiologicalProcess created 1
CellDevelopmentStep created 1
PositiveRegulation created 1
FragmentModification created 1
FailedReaction created 1
ReferenceGroup created 1
IntraChainCrosslinkedResidue created 1
RetractionStatus created 1
GenomeEncodedEntity created 1
CrosslinkedResidue created 1
Book created 1
ModifiedResidue created 1
MarkerReference created 1
GO_MolecularFunction created 1
SequenceOntology created 1
EntityFunctionalStatus created 1
PsiMod created 1
Compartment created 1
Polymer created 1
StableIdentifierReleaseStatus created 1
NegativePrecedingEventReason created 1
Species created 1
Person created 1
Disease created 1
Cell created 1
NegativeGeneExpressionRegulation created 1
ControlReference created 1
TranslationalModification created 1
FragmentDeletionModification created 1
ExternalOntology created 1
NonsenseMutation created 1
Publication created 1
Taxon created 1
ReferenceMolecule created 1
RegulationReference created 1
BlackBoxEvent created 1
Requirement created 1
GO_CellularComponent created 1
OtherEntity created 1
Anatomy created 1
DrugActionType created 1
ReferenceGeneProduct created 1
ReferenceRNASequence created 1
EntityWithAccessionedSequence created 1
ReplacedResidue created 1
ReferenceIsoform created 1
NegativePrecedingEvent created 1
ControlledVocabulary created 1
FragmentInsertionModification created 1
TranscriptionalModification created 1
InteractionEvent created 1
FrontPage created 1
NegativeRegulation created 1
EntitySet created 1
PathwayDiagram created 1
PositiveGeneExpressionRegulation created 1
ReactionlikeEvent created 1
RNADrug created 1
ModifiedNucleotide created 1
Regulation created 1
_Release created 1
GeneticallyModifiedResidue created 1
StableIdentifier created 1
AbstractModifiedResidue created 1
Polymerisation created 1
InstanceEdit created 1
ReactionType created 1
Drug created 1
EvidenceType created 1
ReferenceTherapeutic created 1
CatalystActivity created 1
ProteinDrug created 1
FragmentReplacedModification created 1
ChemicalDrug created 1
PhysicalEntityCellType created 1
DefinedSet created 1
PhysicalEntity created 1
CandidateSet created 1
CellType created 1
ReviewStatus created 1
StableIdentifierHistory created 1
ReferenceSequence created 1
Pathway created 1
FunctionalStatusType created 1
Figure created 1
SimpleEntity created 1
Depolymerisation created 1
CatalystActivityReference created 1
Event created 1
DeletedControlledVocabulary created 1
CellLineagePath created 1
InterChainCrosslinkedResidue created 1
ReferenceDatabase created 1
Complex created 1
ReferenceEntity created 1
_UpdateTracker created 1
FunctionalStatus created 1
DatabaseObject created 1
URL created 1
MarkerReference modified +
ModifiedResidue modified +
GO_MolecularFunction modified +
SequenceOntology modified +
PsiMod modified +
EntityFunctionalStatus modified +
IntraChainCrosslinkedResidue modified +
ReferenceGroup modified +
RetractionStatus modified +
GenomeEncodedEntity modified +
CrosslinkedResidue modified +
Book modified +
Disease modified +
Person modified +
Compartment modified +
Polymer modified +
Species modified +
NegativePrecedingEventReason modified +
StableIdentifierReleaseStatus modified +
ReferenceDNASequence modified +
Summation modified +
LiteratureReference modified +
GroupModifiedResidue modified +
Affiliation modified +
_DeletedInstance modified +
DatabaseIdentifier modified +
_Deleted modified +
Reaction modified +
FailedReaction modified +
FragmentModification modified +
GO_BiologicalProcess modified +
PositiveRegulation modified +
CellDevelopmentStep modified +
DrugActionType modified +
GO_CellularComponent modified +
BlackBoxEvent modified +
Requirement modified +
RegulationReference modified +
Anatomy modified +
OtherEntity modified +
EntityWithAccessionedSequence modified +
ReplacedResidue modified +
ReferenceRNASequence modified +
ReferenceGeneProduct modified +
NegativeGeneExpressionRegulation modified +
Cell modified +
NonsenseMutation modified +
Publication modified +
ExternalOntology modified +
ReferenceMolecule modified +
Taxon modified +
ControlReference modified +
FragmentDeletionModification modified +
TranslationalModification modified +
InstanceEdit modified +
Polymerisation modified +
ReactionType modified +
AbstractModifiedResidue modified +
StableIdentifier modified +
GeneticallyModifiedResidue modified +
FragmentReplacedModification modified +
Drug modified +
ProteinDrug modified +
EvidenceType modified +
ReferenceTherapeutic modified +
CatalystActivity modified +
FragmentInsertionModification modified +
TranscriptionalModification modified +
InteractionEvent modified +
NegativeRegulation modified +
FrontPage modified +
NegativePrecedingEvent modified +
ReferenceIsoform modified +
ControlledVocabulary modified +
ModifiedNucleotide modified +
RNADrug modified +
_Release modified +
Regulation modified +
PositiveGeneExpressionRegulation modified +
EntitySet modified +
PathwayDiagram modified +
ReactionlikeEvent modified +
DeletedControlledVocabulary modified +
Figure modified +
Event modified +
CatalystActivityReference modified +
SimpleEntity modified +
Depolymerisation modified +
_UpdateTracker modified +
DatabaseObject modified +
FunctionalStatus modified +
URL modified +
CellLineagePath modified +
Complex modified +
ReferenceEntity modified +
ReferenceDatabase modified +
InterChainCrosslinkedResidue modified +
PhysicalEntity modified +
DefinedSet modified +
CandidateSet modified +
ChemicalDrug modified +
PhysicalEntityCellType modified +
StableIdentifierHistory modified +
ReferenceSequence modified +
FunctionalStatusType modified +
Pathway modified +
ReviewStatus modified +
CellType modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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