Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
_Deleted replacementInstances +
DeletedControlledVocabulary created 1
RetractionStatus created 1
Complex created 1
CatalystActivity created 1
ReviewStatus created 1
FailedReaction created 1
TranscriptionalModification created 1
GenomeEncodedEntity created 1
Affiliation created 1
Compartment created 1
DefinedSet created 1
IntraChainCrosslinkedResidue created 1
ReferenceEntity created 1
NegativeRegulation created 1
ReferenceMolecule created 1
EntityFunctionalStatus created 1
GeneticallyModifiedResidue created 1
Publication created 1
Reaction created 1
FrontPage created 1
ReplacedResidue created 1
Species created 1
ReferenceGroup created 1
InteractionEvent created 1
FragmentInsertionModification created 1
ModifiedNucleotide created 1
MarkerReference created 1
CellLineagePath created 1
Anatomy created 1
FragmentModification created 1
ProteinDrug created 1
Cell created 1
FunctionalStatus created 1
_Deleted created 1
ControlledVocabulary created 1
_Release created 1
SimpleEntity created 1
FragmentDeletionModification created 1
FunctionalStatusType created 1
ReferenceIsoform created 1
ReactionType created 1
ReactionlikeEvent created 1
Requirement created 1
NonsenseMutation created 1
ReferenceTherapeutic created 1
GO_BiologicalProcess created 1
Person created 1
InstanceEdit created 1
DatabaseObject created 1
BlackBoxEvent created 1
NegativePrecedingEventReason created 1
ModifiedResidue created 1
OtherEntity created 1
AbstractModifiedResidue created 1
StableIdentifier created 1
Pathway created 1
PathwayDiagram created 1
StableIdentifierHistory created 1
EvidenceType created 1
Polymerisation created 1
GroupModifiedResidue created 1
ReferenceDatabase created 1
NegativePrecedingEvent created 1
NegativeGeneExpressionRegulation created 1
_DeletedInstance created 1
SequenceOntology created 1
Drug created 1
PositiveRegulation created 1
Book created 1
ExternalOntology created 1
StableIdentifierReleaseStatus created 1
Disease created 1
CatalystActivityReference created 1
_UpdateTracker created 1
URL created 1
Polymer created 1
LiteratureReference created 1
Event created 1
PsiMod created 1
ChemicalDrug created 1
EntitySet created 1
RNADrug created 1
ReferenceGeneProduct created 1
ReferenceSequence created 1
FragmentReplacedModification created 1
CrosslinkedResidue created 1
PhysicalEntityCellType created 1
CellDevelopmentStep created 1
Regulation created 1
Figure created 1
Summation created 1
PhysicalEntity created 1
CandidateSet created 1
EntityWithAccessionedSequence created 1
RegulationReference created 1
Taxon created 1
DatabaseIdentifier created 1
Depolymerisation created 1
ReferenceRNASequence created 1
ControlReference created 1
InterChainCrosslinkedResidue created 1
PositiveGeneExpressionRegulation created 1
ReferenceDNASequence created 1
CellType created 1
GO_CellularComponent created 1
GO_MolecularFunction created 1
DrugActionType created 1
TranslationalModification created 1
EntityWithAccessionedSequence revised +
Drug revised +
PhysicalEntity revised +
CandidateSet revised +
SimpleEntity revised +
Depolymerisation revised +
Polymerisation revised +
CellLineagePath revised +
Complex revised +
Cell revised +
ProteinDrug revised +
DefinedSet revised +
CellDevelopmentStep revised +
FailedReaction revised +
GenomeEncodedEntity revised +
OtherEntity revised +
ChemicalDrug revised +
EntitySet revised +
InteractionEvent revised +
Event revised +
RNADrug revised +
Pathway revised +
ReactionlikeEvent revised +
Polymer revised +
BlackBoxEvent revised +
Reaction revised +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Event structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
Pathway authored +
RNADrug authored 1
Event authored +
InteractionEvent authored +
EntitySet authored 1
ChemicalDrug authored 1
OtherEntity authored 1
Reaction authored +
BlackBoxEvent authored +
Polymer authored 1
ReactionlikeEvent authored +
Depolymerisation authored +
SimpleEntity authored 1
CandidateSet authored 1
PhysicalEntity authored 1
Drug authored 1
EntityWithAccessionedSequence authored 1
GenomeEncodedEntity authored 1
CellDevelopmentStep authored +
FailedReaction authored +
DefinedSet authored 1
ProteinDrug authored 1
Cell authored 1
Complex authored 1
CellLineagePath authored +
Polymerisation authored +
EntityWithAccessionedSequence reviewed +
Drug reviewed +
PhysicalEntity reviewed +
CandidateSet reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
Polymerisation reviewed +
CellLineagePath reviewed +
Complex reviewed +
ProteinDrug reviewed +
Cell reviewed +
DefinedSet reviewed +
CellDevelopmentStep reviewed +
GenomeEncodedEntity reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
OtherEntity reviewed +
EntitySet reviewed +
InteractionEvent reviewed +
Event reviewed +
RNADrug reviewed +
Pathway reviewed +
ReactionlikeEvent reviewed +
Polymer reviewed +
BlackBoxEvent reviewed +
Reaction reviewed +
Reaction edited +
BlackBoxEvent edited +
Polymer edited +
ReactionlikeEvent edited +
Pathway edited +
RNADrug edited +
Event edited +
InteractionEvent edited +
EntitySet edited +
ChemicalDrug edited +
OtherEntity edited +
CellDevelopmentStep edited +
FailedReaction edited +
GenomeEncodedEntity edited +
DefinedSet edited +
Cell edited +
ProteinDrug edited +
Complex edited +
CellLineagePath edited +
Polymerisation edited +
SimpleEntity edited +
Depolymerisation edited +
CandidateSet edited +
PhysicalEntity edited +
Drug edited +
EntityWithAccessionedSequence edited +
RNADrug modified +
ReferenceSequence modified +
ReferenceGeneProduct modified +
PsiMod modified +
EntitySet modified +
ChemicalDrug modified +
Event modified +
Polymer modified +
LiteratureReference modified +
_UpdateTracker modified +
URL modified +
Disease modified +
CatalystActivityReference modified +
StableIdentifierReleaseStatus modified +
Book modified +
ExternalOntology modified +
PositiveRegulation modified +
SequenceOntology modified +
_DeletedInstance modified +
NegativeGeneExpressionRegulation modified +
Drug modified +
NegativePrecedingEvent modified +
GroupModifiedResidue modified +
ReferenceDatabase modified +
Polymerisation modified +
EvidenceType modified +
TranslationalModification modified +
DrugActionType modified +
GO_MolecularFunction modified +
PositiveGeneExpressionRegulation modified +
ReferenceDNASequence modified +
CellType modified +
GO_CellularComponent modified +
InterChainCrosslinkedResidue modified +
ReferenceRNASequence modified +
ControlReference modified +
Depolymerisation modified +
RegulationReference modified +
EntityWithAccessionedSequence modified +
Taxon modified +
DatabaseIdentifier modified +
PhysicalEntity modified +
Summation modified +
CandidateSet modified +
Regulation modified +
Figure modified +
PhysicalEntityCellType modified +
CellDevelopmentStep modified +
CrosslinkedResidue modified +
FragmentReplacedModification modified +
FragmentInsertionModification modified +
ModifiedNucleotide modified +
MarkerReference modified +
Species modified +
ReferenceGroup modified +
InteractionEvent modified +
ReplacedResidue modified +
FrontPage modified +
Reaction modified +
EntityFunctionalStatus modified +
GeneticallyModifiedResidue modified +
Publication modified +
ReferenceMolecule modified +
NegativeRegulation modified +
ReferenceEntity modified +
IntraChainCrosslinkedResidue modified +
Compartment modified +
DefinedSet modified +
FailedReaction modified +
TranscriptionalModification modified +
Affiliation modified +
GenomeEncodedEntity modified +
CatalystActivity modified +
ReviewStatus modified +
DeletedControlledVocabulary modified +
RetractionStatus modified +
Complex modified +
StableIdentifierHistory modified +
StableIdentifier modified +
PathwayDiagram modified +
Pathway modified +
AbstractModifiedResidue modified +
OtherEntity modified +
ModifiedResidue modified +
NegativePrecedingEventReason modified +
DatabaseObject modified +
InstanceEdit modified +
BlackBoxEvent modified +
ReferenceTherapeutic modified +
NonsenseMutation modified +
GO_BiologicalProcess modified +
Person modified +
ReactionlikeEvent modified +
ReactionType modified +
ReferenceIsoform modified +
Requirement modified +
FunctionalStatusType modified +
_Release modified +
FragmentDeletionModification modified +
SimpleEntity modified +
ControlledVocabulary modified +
_Deleted modified +
ProteinDrug modified +
FragmentModification modified +
Cell modified +
FunctionalStatus modified +
Anatomy modified +
CellLineagePath modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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