Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReferenceRNASequence modified +
PsiMod modified +
DatabaseObject modified +
GenomeEncodedEntity modified +
RetractionStatus modified +
CatalystActivity modified +
StableIdentifierHistory modified +
ReferenceTherapeutic modified +
ExternalOntology modified +
PositiveRegulation modified +
Polymerisation modified +
_Release modified +
Anatomy modified +
Reaction modified +
FragmentModification modified +
MarkerReference modified +
Summation modified +
ReactionType modified +
FunctionalStatus modified +
FragmentReplacedModification modified +
ControlReference modified +
ModifiedNucleotide modified +
GeneticallyModifiedResidue modified +
Drug modified +
TranscriptionalModification modified +
EntitySet modified +
BlackBoxEvent modified +
Complex modified +
ReactionlikeEvent modified +
Affiliation modified +
StableIdentifier modified +
ChemicalDrug modified +
SequenceOntology modified +
Publication modified +
CellDevelopmentStep modified +
Person modified +
NegativePrecedingEventReason modified +
StableIdentifierReleaseStatus modified +
DatabaseIdentifier modified +
IntraChainCrosslinkedResidue modified +
NegativePrecedingEvent modified +
DeletedControlledVocabulary modified +
ReferenceGroup modified +
CandidateSet modified +
EntityFunctionalStatus modified +
Species modified +
InstanceEdit modified +
DrugActionType modified +
Regulation modified +
FailedReaction modified +
ReferenceGeneProduct modified +
LiteratureReference modified +
Taxon modified +
Event modified +
URL modified +
Depolymerisation modified +
PhysicalEntity modified +
RegulationReference modified +
GO_BiologicalProcess modified +
ReplacedResidue modified +
CrosslinkedResidue modified +
EntityWithAccessionedSequence modified +
ReferenceDNASequence modified +
ReferenceSequence modified +
Disease modified +
Cell modified +
PhysicalEntityCellType modified +
PositiveGeneExpressionRegulation modified +
FragmentInsertionModification modified +
CellType modified +
RNADrug modified +
GO_CellularComponent modified +
ReviewStatus modified +
FunctionalStatusType modified +
FragmentDeletionModification modified +
CellLineagePath modified +
ReferenceDatabase modified +
AbstractModifiedResidue modified +
SimpleEntity modified +
ProteinDrug modified +
GroupModifiedResidue modified +
CatalystActivityReference modified +
Figure modified +
NegativeRegulation modified +
_UpdateTracker modified +
Requirement modified +
Polymer modified +
GO_MolecularFunction modified +
PathwayDiagram modified +
_Deleted modified +
OtherEntity modified +
ControlledVocabulary modified +
ReferenceEntity modified +
ModifiedResidue modified +
ReferenceIsoform modified +
InterChainCrosslinkedResidue modified +
Compartment modified +
_DeletedInstance modified +
Book modified +
TranslationalModification modified +
NegativeGeneExpressionRegulation modified +
Pathway modified +
InteractionEvent modified +
DefinedSet modified +
NonsenseMutation modified +
FrontPage modified +
ReferenceMolecule modified +
EvidenceType modified +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
Drug authored 1
PhysicalEntity authored 1
Polymer authored 1
Reaction authored +
Depolymerisation authored +
InteractionEvent authored +
Polymerisation authored +
Event authored +
DefinedSet authored 1
FailedReaction authored +
Pathway authored +
ProteinDrug authored 1
SimpleEntity authored 1
CellLineagePath authored +
CandidateSet authored 1
RNADrug authored 1
CellDevelopmentStep authored +
GenomeEncodedEntity authored 1
ChemicalDrug authored 1
ReactionlikeEvent authored +
Cell authored 1
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
Complex authored 1
EntitySet authored 1
OtherEntity authored 1
RNADrug edited +
CandidateSet edited +
OtherEntity edited +
BlackBoxEvent edited +
EntitySet edited +
Complex edited +
EntityWithAccessionedSequence edited +
Cell edited +
ReactionlikeEvent edited +
ChemicalDrug edited +
GenomeEncodedEntity edited +
CellDevelopmentStep edited +
Depolymerisation edited +
Reaction edited +
Polymer edited +
PhysicalEntity edited +
Drug edited +
CellLineagePath edited +
ProteinDrug edited +
SimpleEntity edited +
Pathway edited +
FailedReaction edited +
Event edited +
DefinedSet edited +
InteractionEvent edited +
Polymerisation edited +
DefinedSet revised +
Event revised +
Polymerisation revised +
InteractionEvent revised +
Pathway revised +
FailedReaction revised +
ProteinDrug revised +
SimpleEntity revised +
CellLineagePath revised +
Drug revised +
Reaction revised +
Polymer revised +
PhysicalEntity revised +
Depolymerisation revised +
CellDevelopmentStep revised +
GenomeEncodedEntity revised +
ReactionlikeEvent revised +
ChemicalDrug revised +
Cell revised +
BlackBoxEvent revised +
Complex revised +
EntitySet revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
CandidateSet revised +
RNADrug revised +
PhysicalEntity reviewed +
Polymer reviewed +
Reaction reviewed +
Depolymerisation reviewed +
Drug reviewed +
SimpleEntity reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
Polymerisation reviewed +
InteractionEvent reviewed +
Event reviewed +
DefinedSet reviewed +
FailedReaction reviewed +
Pathway reviewed +
RNADrug reviewed +
CandidateSet reviewed +
ReactionlikeEvent reviewed +
ChemicalDrug reviewed +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
EntitySet reviewed +
OtherEntity reviewed +
CellDevelopmentStep reviewed +
GenomeEncodedEntity reviewed +
Figure created 1
NegativeRegulation created 1
_UpdateTracker created 1
GroupModifiedResidue created 1
CatalystActivityReference created 1
AbstractModifiedResidue created 1
ReferenceDatabase created 1
ProteinDrug created 1
SimpleEntity created 1
CellLineagePath created 1
_Deleted created 1
PathwayDiagram created 1
GO_MolecularFunction created 1
Requirement created 1
Polymer created 1
PositiveGeneExpressionRegulation created 1
Cell created 1
PhysicalEntityCellType created 1
EntityWithAccessionedSequence created 1
ReferenceDNASequence created 1
ReferenceSequence created 1
Disease created 1
GO_CellularComponent created 1
FragmentDeletionModification created 1
ReviewStatus created 1
FunctionalStatusType created 1
RNADrug created 1
CellType created 1
FragmentInsertionModification created 1
InteractionEvent created 1
NonsenseMutation created 1
FrontPage created 1
DefinedSet created 1
Pathway created 1
NegativeGeneExpressionRegulation created 1
EvidenceType created 1
ReferenceMolecule created 1
ReferenceEntity created 1
ControlledVocabulary created 1
OtherEntity created 1
TranslationalModification created 1
Book created 1
Compartment created 1
_DeletedInstance created 1
InterChainCrosslinkedResidue created 1
ModifiedResidue created 1
ReferenceIsoform created 1
Polymerisation created 1
ModifiedNucleotide created 1
GeneticallyModifiedResidue created 1
Drug created 1
FunctionalStatus created 1
ReactionType created 1
FragmentReplacedModification created 1
ControlReference created 1
Reaction created 1
Summation created 1
MarkerReference created 1
FragmentModification created 1
_Release created 1
Anatomy created 1
RetractionStatus created 1
GenomeEncodedEntity created 1
PsiMod created 1
DatabaseObject created 1
ReferenceRNASequence created 1
PositiveRegulation created 1
CatalystActivity created 1
ExternalOntology created 1
StableIdentifierHistory created 1
ReferenceTherapeutic created 1
Taxon created 1
Event created 1
ReferenceGeneProduct created 1
FailedReaction created 1
LiteratureReference created 1
DrugActionType created 1
Regulation created 1
InstanceEdit created 1
CrosslinkedResidue created 1
ReplacedResidue created 1
PhysicalEntity created 1
GO_BiologicalProcess created 1
RegulationReference created 1
Depolymerisation created 1
URL created 1
CellDevelopmentStep created 1
Person created 1
NegativePrecedingEventReason created 1
StableIdentifierReleaseStatus created 1
SequenceOntology created 1
Publication created 1
StableIdentifier created 1
ReactionlikeEvent created 1
ChemicalDrug created 1
Affiliation created 1
TranscriptionalModification created 1
BlackBoxEvent created 1
EntitySet created 1
Complex created 1
Species created 1
EntityFunctionalStatus created 1
CandidateSet created 1
DeletedControlledVocabulary created 1
NegativePrecedingEvent created 1
ReferenceGroup created 1
IntraChainCrosslinkedResidue created 1
DatabaseIdentifier created 1
_Deleted replacementInstances +
Reaction structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
Event structureModified +
FailedReaction structureModified +
Pathway structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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