Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
SimpleEntity edited +
Complex edited +
Reaction edited +
EntitySet edited +
CandidateSet edited +
Event edited +
Pathway edited +
OtherEntity edited +
Depolymerisation edited +
ReactionlikeEvent edited +
Polymer edited +
DefinedSet edited +
EntityWithAccessionedSequence edited +
CellDevelopmentStep edited +
BlackBoxEvent edited +
RNADrug edited +
CellLineagePath edited +
PhysicalEntity edited +
Cell edited +
FailedReaction edited +
Drug edited +
Polymerisation edited +
ChemicalDrug edited +
ProteinDrug edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
ProteinDrug reviewed +
InteractionEvent reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
ChemicalDrug reviewed +
Cell reviewed +
Drug reviewed +
FailedReaction reviewed +
CellLineagePath reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
DefinedSet reviewed +
ReactionlikeEvent reviewed +
Depolymerisation reviewed +
EntityWithAccessionedSequence reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
RNADrug reviewed +
Pathway reviewed +
OtherEntity reviewed +
Event reviewed +
CandidateSet reviewed +
Complex reviewed +
Reaction reviewed +
EntitySet reviewed +
SimpleEntity reviewed +
ProteinDrug revised +
InteractionEvent revised +
GenomeEncodedEntity revised +
Polymerisation revised +
ChemicalDrug revised +
Cell revised +
Drug revised +
FailedReaction revised +
CellLineagePath revised +
PhysicalEntity revised +
Depolymerisation revised +
ReactionlikeEvent revised +
Polymer revised +
DefinedSet revised +
CellDevelopmentStep revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
RNADrug revised +
Pathway revised +
OtherEntity revised +
CandidateSet revised +
Event revised +
SimpleEntity revised +
EntitySet revised +
Reaction revised +
Complex revised +
Depolymerisation authored +
DefinedSet authored 1
Polymer authored 1
ReactionlikeEvent authored +
CellDevelopmentStep authored +
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
RNADrug authored 1
OtherEntity authored 1
Pathway authored +
CandidateSet authored 1
Event authored +
SimpleEntity authored 1
EntitySet authored 1
Reaction authored +
Complex authored 1
ProteinDrug authored 1
InteractionEvent authored +
GenomeEncodedEntity authored 1
Polymerisation authored +
ChemicalDrug authored 1
Cell authored 1
FailedReaction authored +
Drug authored 1
CellLineagePath authored +
PhysicalEntity authored 1
AbstractModifiedResidue modified +
SimpleEntity modified +
Reaction modified +
StableIdentifierReleaseStatus modified +
ReferenceMolecule modified +
ReviewStatus modified +
Pathway modified +
DatabaseIdentifier modified +
_UpdateTracker modified +
DrugActionType modified +
Book modified +
NegativeRegulation modified +
ReferenceRNASequence modified +
EntityWithAccessionedSequence modified +
CellDevelopmentStep modified +
Disease modified +
Regulation modified +
Polymer modified +
RegulationReference modified +
DefinedSet modified +
FrontPage modified +
_Deleted modified +
EvidenceType modified +
GO_CellularComponent modified +
PathwayDiagram modified +
FailedReaction modified +
FragmentInsertionModification modified +
Taxon modified +
TranslationalModification modified +
EntitySet modified +
FunctionalStatus modified +
DeletedControlledVocabulary modified +
PositiveRegulation modified +
CandidateSet modified +
Affiliation modified +
ReactionType modified +
Event modified +
DatabaseObject modified +
FragmentDeletionModification modified +
OtherEntity modified +
ReferenceDatabase modified +
FragmentModification modified +
Requirement modified +
Person modified +
StableIdentifierHistory modified +
Depolymerisation modified +
GO_MolecularFunction modified +
SequenceOntology modified +
Anatomy modified +
CellLineagePath modified +
IntraChainCrosslinkedResidue modified +
Drug modified +
InterChainCrosslinkedResidue modified +
ModifiedResidue modified +
ChemicalDrug modified +
NonsenseMutation modified +
InteractionEvent modified +
GenomeEncodedEntity modified +
ReferenceEntity modified +
_DeletedInstance modified +
ControlReference modified +
CrosslinkedResidue modified +
ReferenceDNASequence modified +
ReferenceTherapeutic modified +
RNADrug modified +
BlackBoxEvent modified +
LiteratureReference modified +
NegativePrecedingEvent modified +
PositiveGeneExpressionRegulation modified +
PhysicalEntity modified +
InstanceEdit modified +
ReferenceGeneProduct modified +
Summation modified +
Cell modified +
ControlledVocabulary modified +
NegativeGeneExpressionRegulation modified +
ReferenceIsoform modified +
ModifiedNucleotide modified +
ReplacedResidue modified +
MarkerReference modified +
Polymerisation modified +
StableIdentifier modified +
CellType modified +
Species modified +
ProteinDrug modified +
TranscriptionalModification modified +
Complex modified +
FragmentReplacedModification modified +
Figure modified +
Publication modified +
CatalystActivityReference modified +
RetractionStatus modified +
URL modified +
CatalystActivity modified +
ExternalOntology modified +
_Release modified +
NegativePrecedingEventReason modified +
EntityFunctionalStatus modified +
ReactionlikeEvent modified +
PsiMod modified +
ReferenceSequence modified +
GroupModifiedResidue modified +
GeneticallyModifiedResidue modified +
PhysicalEntityCellType modified +
ReferenceGroup modified +
FunctionalStatusType modified +
GO_BiologicalProcess modified +
Compartment modified +
ReferenceDNASequence created 1
NegativePrecedingEvent created 1
LiteratureReference created 1
BlackBoxEvent created 1
RNADrug created 1
ReferenceTherapeutic created 1
ControlReference created 1
_DeletedInstance created 1
ReferenceEntity created 1
CrosslinkedResidue created 1
Polymerisation created 1
ReplacedResidue created 1
MarkerReference created 1
ModifiedNucleotide created 1
TranscriptionalModification created 1
ProteinDrug created 1
CellType created 1
Species created 1
StableIdentifier created 1
InstanceEdit created 1
PhysicalEntity created 1
PositiveGeneExpressionRegulation created 1
NegativeGeneExpressionRegulation created 1
ControlledVocabulary created 1
ReferenceIsoform created 1
Cell created 1
ReferenceGeneProduct created 1
Summation created 1
_Release created 1
ExternalOntology created 1
CatalystActivity created 1
RetractionStatus created 1
URL created 1
ReactionlikeEvent created 1
EntityFunctionalStatus created 1
NegativePrecedingEventReason created 1
FragmentReplacedModification created 1
Complex created 1
CatalystActivityReference created 1
Publication created 1
Figure created 1
GO_BiologicalProcess created 1
FunctionalStatusType created 1
ReferenceGroup created 1
Compartment created 1
PhysicalEntityCellType created 1
GeneticallyModifiedResidue created 1
GroupModifiedResidue created 1
ReferenceSequence created 1
PsiMod created 1
NegativeRegulation created 1
DrugActionType created 1
Book created 1
_UpdateTracker created 1
DatabaseIdentifier created 1
ReviewStatus created 1
Pathway created 1
DefinedSet created 1
Regulation created 1
Polymer created 1
RegulationReference created 1
Disease created 1
EntityWithAccessionedSequence created 1
CellDevelopmentStep created 1
ReferenceRNASequence created 1
Reaction created 1
AbstractModifiedResidue created 1
SimpleEntity created 1
ReferenceMolecule created 1
StableIdentifierReleaseStatus created 1
TranslationalModification created 1
PathwayDiagram created 1
GO_CellularComponent created 1
EvidenceType created 1
_Deleted created 1
FrontPage created 1
Taxon created 1
FragmentInsertionModification created 1
FailedReaction created 1
FragmentModification created 1
Requirement created 1
ReferenceDatabase created 1
Person created 1
OtherEntity created 1
GO_MolecularFunction created 1
SequenceOntology created 1
Depolymerisation created 1
StableIdentifierHistory created 1
DeletedControlledVocabulary created 1
EntitySet created 1
FunctionalStatus created 1
FragmentDeletionModification created 1
DatabaseObject created 1
Event created 1
ReactionType created 1
CandidateSet created 1
PositiveRegulation created 1
Affiliation created 1
ChemicalDrug created 1
InterChainCrosslinkedResidue created 1
ModifiedResidue created 1
InteractionEvent created 1
GenomeEncodedEntity created 1
NonsenseMutation created 1
CellLineagePath created 1
Anatomy created 1
Drug created 1
IntraChainCrosslinkedResidue created 1
CellLineagePath internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath structureModified +
Reaction structureModified +
Event structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
Pathway structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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