Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
BlackBoxEvent structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
InteractionEvent structureModified +
Pathway structureModified +
CellLineagePath structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
PhysicalEntityCellType modified +
SequenceOntology modified +
DatabaseIdentifier modified +
_Release modified +
EvidenceType modified +
ReferenceDatabase modified +
EntitySet modified +
ReferenceTherapeutic modified +
ModifiedResidue modified +
GO_BiologicalProcess modified +
DefinedSet modified +
NegativePrecedingEvent modified +
NegativeGeneExpressionRegulation modified +
FragmentInsertionModification modified +
CellLineagePath modified +
MarkerReference modified +
Summation modified +
ReferenceEntity modified +
Anatomy modified +
PhysicalEntity modified +
Taxon modified +
InteractionEvent modified +
GO_CellularComponent modified +
Requirement modified +
Depolymerisation modified +
ReferenceIsoform modified +
OtherEntity modified +
ReferenceGroup modified +
Polymer modified +
Event modified +
InstanceEdit modified +
GroupModifiedResidue modified +
FragmentDeletionModification modified +
_DeletedInstance modified +
CrosslinkedResidue modified +
ReferenceDNASequence modified +
Person modified +
URL modified +
Cell modified +
TranslationalModification modified +
ChemicalDrug modified +
FragmentReplacedModification modified +
Compartment modified +
Polymerisation modified +
Disease modified +
Regulation modified +
Species modified +
ReferenceRNASequence modified +
SimpleEntity modified +
FunctionalStatusType modified +
Affiliation modified +
Pathway modified +
GenomeEncodedEntity modified +
IntraChainCrosslinkedResidue modified +
CandidateSet modified +
ControlReference modified +
BlackBoxEvent modified +
Complex modified +
ReferenceGeneProduct modified +
CellDevelopmentStep modified +
Drug modified +
DeletedControlledVocabulary modified +
Figure modified +
StableIdentifierReleaseStatus modified +
StableIdentifier modified +
_Deleted modified +
InterChainCrosslinkedResidue modified +
Reaction modified +
ProteinDrug modified +
NonsenseMutation modified +
ExternalOntology modified +
PositiveRegulation modified +
ReactionType modified +
LiteratureReference modified +
ReferenceSequence modified +
DatabaseObject modified +
NegativeRegulation modified +
StableIdentifierHistory modified +
PsiMod modified +
GeneticallyModifiedResidue modified +
GO_MolecularFunction modified +
TranscriptionalModification modified +
ControlledVocabulary modified +
AbstractModifiedResidue modified +
RetractionStatus modified +
CellType modified +
DrugActionType modified +
RegulationReference modified +
EntityFunctionalStatus modified +
_UpdateTracker modified +
Book modified +
FrontPage modified +
CatalystActivity modified +
ReactionlikeEvent modified +
NegativePrecedingEventReason modified +
PositiveGeneExpressionRegulation modified +
FunctionalStatus modified +
ReplacedResidue modified +
RNADrug modified +
Publication modified +
ReferenceMolecule modified +
ReviewStatus modified +
EntityWithAccessionedSequence modified +
PathwayDiagram modified +
FragmentModification modified +
CatalystActivityReference modified +
ModifiedNucleotide modified +
FailedReaction modified +
GenomeEncodedEntity reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
FailedReaction reviewed +
Depolymerisation reviewed +
Drug reviewed +
CellDevelopmentStep reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
ReactionlikeEvent reviewed +
RNADrug reviewed +
Pathway reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
ProteinDrug reviewed +
DefinedSet reviewed +
Polymerisation reviewed +
OtherEntity reviewed +
Polymer reviewed +
Event reviewed +
EntitySet reviewed +
Cell reviewed +
_Deleted replacementInstances +
CellDevelopmentStep revised +
Drug revised +
Depolymerisation revised +
FailedReaction revised +
BlackBoxEvent revised +
Complex revised +
CandidateSet revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
PhysicalEntity revised +
GenomeEncodedEntity revised +
Pathway revised +
RNADrug revised +
ReactionlikeEvent revised +
SimpleEntity revised +
CellLineagePath revised +
Polymerisation revised +
DefinedSet revised +
ProteinDrug revised +
ChemicalDrug revised +
Reaction revised +
EntitySet revised +
Cell revised +
Event revised +
Polymer revised +
OtherEntity revised +
RegulationReference created 1
DrugActionType created 1
ControlledVocabulary created 1
TranscriptionalModification created 1
AbstractModifiedResidue created 1
RetractionStatus created 1
CellType created 1
_UpdateTracker created 1
Book created 1
FrontPage created 1
EntityFunctionalStatus created 1
RNADrug created 1
ReplacedResidue created 1
ReferenceMolecule created 1
Publication created 1
ReviewStatus created 1
CatalystActivity created 1
ReactionlikeEvent created 1
PositiveGeneExpressionRegulation created 1
NegativePrecedingEventReason created 1
FunctionalStatus created 1
ModifiedNucleotide created 1
FailedReaction created 1
PathwayDiagram created 1
CatalystActivityReference created 1
FragmentModification created 1
EntityWithAccessionedSequence created 1
StableIdentifier created 1
_Deleted created 1
InterChainCrosslinkedResidue created 1
Figure created 1
StableIdentifierReleaseStatus created 1
NonsenseMutation created 1
PositiveRegulation created 1
ExternalOntology created 1
Reaction created 1
ProteinDrug created 1
DatabaseObject created 1
ReferenceSequence created 1
ReactionType created 1
LiteratureReference created 1
StableIdentifierHistory created 1
PsiMod created 1
GeneticallyModifiedResidue created 1
GO_MolecularFunction created 1
NegativeRegulation created 1
_DeletedInstance created 1
ReferenceDNASequence created 1
CrosslinkedResidue created 1
Person created 1
URL created 1
Cell created 1
OtherEntity created 1
Event created 1
ReferenceGroup created 1
Polymer created 1
GroupModifiedResidue created 1
InstanceEdit created 1
FragmentDeletionModification created 1
Compartment created 1
Disease created 1
Regulation created 1
Polymerisation created 1
TranslationalModification created 1
ChemicalDrug created 1
FragmentReplacedModification created 1
Affiliation created 1
Pathway created 1
Species created 1
ReferenceRNASequence created 1
SimpleEntity created 1
FunctionalStatusType created 1
ControlReference created 1
CandidateSet created 1
Complex created 1
BlackBoxEvent created 1
ReferenceGeneProduct created 1
CellDevelopmentStep created 1
Drug created 1
DeletedControlledVocabulary created 1
GenomeEncodedEntity created 1
IntraChainCrosslinkedResidue created 1
EvidenceType created 1
ReferenceDatabase created 1
_Release created 1
EntitySet created 1
PhysicalEntityCellType created 1
SequenceOntology created 1
DatabaseIdentifier created 1
NegativePrecedingEvent created 1
NegativeGeneExpressionRegulation created 1
FragmentInsertionModification created 1
GO_BiologicalProcess created 1
ModifiedResidue created 1
ReferenceTherapeutic created 1
DefinedSet created 1
ReferenceEntity created 1
CellLineagePath created 1
MarkerReference created 1
Summation created 1
GO_CellularComponent created 1
Requirement created 1
Depolymerisation created 1
ReferenceIsoform created 1
Anatomy created 1
PhysicalEntity created 1
InteractionEvent created 1
Taxon created 1
Polymerisation authored +
Reaction authored +
ProteinDrug authored 1
DefinedSet authored 1
ChemicalDrug authored 1
EntitySet authored 1
Cell authored 1
Event authored +
Polymer authored 1
OtherEntity authored 1
Complex authored 1
BlackBoxEvent authored +
CandidateSet authored 1
Depolymerisation authored +
Drug authored 1
CellDevelopmentStep authored +
FailedReaction authored +
GenomeEncodedEntity authored 1
InteractionEvent authored +
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
RNADrug authored 1
Pathway authored +
SimpleEntity authored 1
CellLineagePath authored +
ReactionlikeEvent authored +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
GenomeEncodedEntity edited +
PhysicalEntity edited +
InteractionEvent edited +
EntityWithAccessionedSequence edited +
CandidateSet edited +
BlackBoxEvent edited +
Complex edited +
FailedReaction edited +
Depolymerisation edited +
Drug edited +
CellDevelopmentStep edited +
CellLineagePath edited +
SimpleEntity edited +
ReactionlikeEvent edited +
RNADrug edited +
Pathway edited +
Reaction edited +
ChemicalDrug edited +
ProteinDrug edited +
DefinedSet edited +
Polymerisation edited +
OtherEntity edited +
Polymer edited +
Event edited +
EntitySet edited +
Cell edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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