Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ExternalOntology created 1
_Deleted created 1
Summation created 1
DrugActionType created 1
Figure created 1
SimpleEntity created 1
_DeletedInstance created 1
Book created 1
FailedReaction created 1
Taxon created 1
PhysicalEntity created 1
Compartment created 1
ReactionType created 1
NegativeGeneExpressionRegulation created 1
ReferenceGroup created 1
Person created 1
URL created 1
Pathway created 1
ProteinDrug created 1
Reaction created 1
CrosslinkedResidue created 1
ReferenceGeneProduct created 1
ReferenceIsoform created 1
MarkerReference created 1
ReferenceDNASequence created 1
Disease created 1
GenomeEncodedEntity created 1
Event created 1
_Release created 1
CellDevelopmentStep created 1
ModifiedResidue created 1
Polymerisation created 1
ReferenceTherapeutic created 1
RegulationReference created 1
GeneticallyModifiedResidue created 1
Polymer created 1
SequenceOntology created 1
Regulation created 1
DatabaseObject created 1
FragmentModification created 1
_UpdateTracker created 1
TranslationalModification created 1
Affiliation created 1
Anatomy created 1
ReplacedResidue created 1
EntitySet created 1
RNADrug created 1
FragmentInsertionModification created 1
StableIdentifierReleaseStatus created 1
Complex created 1
GO_CellularComponent created 1
ReferenceEntity created 1
NegativeRegulation created 1
ReferenceSequence created 1
FrontPage created 1
IntraChainCrosslinkedResidue created 1
Cell created 1
GO_BiologicalProcess created 1
ReferenceDatabase created 1
EntityWithAccessionedSequence created 1
FragmentDeletionModification created 1
OtherEntity created 1
ControlledVocabulary created 1
Depolymerisation created 1
ReferenceRNASequence created 1
RetractionStatus created 1
PositiveGeneExpressionRegulation created 1
Drug created 1
FragmentReplacedModification created 1
LiteratureReference created 1
BlackBoxEvent created 1
InteractionEvent created 1
StableIdentifierHistory created 1
InstanceEdit created 1
GroupModifiedResidue created 1
PsiMod created 1
EvidenceType created 1
CellType created 1
TranscriptionalModification created 1
EntityFunctionalStatus created 1
DatabaseIdentifier created 1
Requirement created 1
ControlReference created 1
CatalystActivityReference created 1
FunctionalStatusType created 1
PositiveRegulation created 1
NegativePrecedingEvent created 1
ReactionlikeEvent created 1
NonsenseMutation created 1
InterChainCrosslinkedResidue created 1
ModifiedNucleotide created 1
CatalystActivity created 1
GO_MolecularFunction created 1
FunctionalStatus created 1
ReferenceMolecule created 1
DeletedControlledVocabulary created 1
ChemicalDrug created 1
CandidateSet created 1
ReviewStatus created 1
NegativePrecedingEventReason created 1
DefinedSet created 1
AbstractModifiedResidue created 1
Species created 1
Publication created 1
StableIdentifier created 1
CellLineagePath created 1
PhysicalEntityCellType created 1
PathwayDiagram created 1
PhysicalEntity revised +
RNADrug revised +
DefinedSet revised +
Pathway revised +
EntitySet revised +
CellLineagePath revised +
ReactionlikeEvent revised +
Complex revised +
ProteinDrug revised +
Reaction revised +
GenomeEncodedEntity revised +
CellDevelopmentStep revised +
ChemicalDrug revised +
CandidateSet revised +
Event revised +
EntityWithAccessionedSequence revised +
Cell revised +
Drug revised +
Depolymerisation revised +
OtherEntity revised +
Polymerisation revised +
SimpleEntity revised +
BlackBoxEvent revised +
Polymer revised +
InteractionEvent revised +
FailedReaction revised +
BlackBoxEvent edited +
Polymer edited +
InteractionEvent edited +
SimpleEntity edited +
FailedReaction edited +
EntityWithAccessionedSequence edited +
Event edited +
Cell edited +
CellDevelopmentStep edited +
ChemicalDrug edited +
CandidateSet edited +
Polymerisation edited +
OtherEntity edited +
Drug edited +
Depolymerisation edited +
Complex edited +
ProteinDrug edited +
Reaction edited +
CellLineagePath edited +
ReactionlikeEvent edited +
GenomeEncodedEntity edited +
PhysicalEntity edited +
Pathway edited +
EntitySet edited +
DefinedSet edited +
RNADrug edited +
FailedReaction authored +
BlackBoxEvent authored +
Polymer authored 1
InteractionEvent authored +
SimpleEntity authored 1
Polymerisation authored +
OtherEntity authored 1
Drug authored 1
Depolymerisation authored +
EntityWithAccessionedSequence authored 1
Event authored +
Cell authored 1
CellDevelopmentStep authored +
CandidateSet authored 1
ChemicalDrug authored 1
GenomeEncodedEntity authored 1
Complex authored 1
ProteinDrug authored 1
Reaction authored +
CellLineagePath authored +
ReactionlikeEvent authored +
Pathway authored +
EntitySet authored 1
DefinedSet authored 1
RNADrug authored 1
PhysicalEntity authored 1
FailedReaction structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Reaction structureModified +
Depolymerisation structureModified +
Pathway structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
Event structureModified +
ReviewStatus modified +
DeletedControlledVocabulary modified +
CandidateSet modified +
ChemicalDrug modified +
PathwayDiagram modified +
PhysicalEntityCellType modified +
AbstractModifiedResidue modified +
Species modified +
Publication modified +
CellLineagePath modified +
StableIdentifier modified +
DefinedSet modified +
NegativePrecedingEventReason modified +
EvidenceType modified +
CellType modified +
BlackBoxEvent modified +
InteractionEvent modified +
LiteratureReference modified +
PsiMod modified +
GroupModifiedResidue modified +
InstanceEdit modified +
StableIdentifierHistory modified +
OtherEntity modified +
PositiveGeneExpressionRegulation modified +
Drug modified +
FragmentReplacedModification modified +
RetractionStatus modified +
Depolymerisation modified +
ControlledVocabulary modified +
ReferenceRNASequence modified +
ReferenceDatabase modified +
EntityWithAccessionedSequence modified +
GO_BiologicalProcess modified +
Cell modified +
FragmentDeletionModification modified +
GO_MolecularFunction modified +
ModifiedNucleotide modified +
InterChainCrosslinkedResidue modified +
CatalystActivity modified +
ReferenceMolecule modified +
FunctionalStatus modified +
NegativePrecedingEvent modified +
PositiveRegulation modified +
NonsenseMutation modified +
ReactionlikeEvent modified +
ControlReference modified +
Requirement modified +
FunctionalStatusType modified +
CatalystActivityReference modified +
EntityFunctionalStatus modified +
TranscriptionalModification modified +
DatabaseIdentifier modified +
_UpdateTracker modified +
TranslationalModification modified +
Polymer modified +
Regulation modified +
DatabaseObject modified +
FragmentModification modified +
SequenceOntology modified +
ModifiedResidue modified +
Polymerisation modified +
RegulationReference modified +
GeneticallyModifiedResidue modified +
ReferenceTherapeutic modified +
Event modified +
CellDevelopmentStep modified +
_Release modified +
FrontPage modified +
NegativeRegulation modified +
ReferenceSequence modified +
IntraChainCrosslinkedResidue modified +
Complex modified +
StableIdentifierReleaseStatus modified +
ReferenceEntity modified +
GO_CellularComponent modified +
EntitySet modified +
FragmentInsertionModification modified +
RNADrug modified +
Affiliation modified +
ReplacedResidue modified +
Anatomy modified +
FailedReaction modified +
Book modified +
SimpleEntity modified +
_DeletedInstance modified +
Figure modified +
_Deleted modified +
ExternalOntology modified +
DrugActionType modified +
Summation modified +
ReferenceDNASequence modified +
MarkerReference modified +
ReferenceIsoform modified +
GenomeEncodedEntity modified +
Disease modified +
ProteinDrug modified +
Reaction modified +
ReferenceGeneProduct modified +
CrosslinkedResidue modified +
URL modified +
Pathway modified +
NegativeGeneExpressionRegulation modified +
Person modified +
ReferenceGroup modified +
Compartment modified +
Taxon modified +
PhysicalEntity modified +
ReactionType modified +
_Deleted replacementInstances +
Cell reviewed +
Event reviewed +
EntityWithAccessionedSequence reviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
CellDevelopmentStep reviewed +
OtherEntity reviewed +
Polymerisation reviewed +
Depolymerisation reviewed +
Drug reviewed +
Polymer reviewed +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
PhysicalEntity reviewed +
EntitySet reviewed +
Pathway reviewed +
DefinedSet reviewed +
RNADrug reviewed +
Reaction reviewed +
ProteinDrug reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
CellLineagePath reviewed +
GenomeEncodedEntity reviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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