Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymer revised +
RNADrug revised +
SimpleEntity revised +
Reaction revised +
OtherEntity revised +
BlackBoxEvent revised +
ProteinDrug revised +
Pathway revised +
Complex revised +
Polymerisation revised +
Cell revised +
EntityWithAccessionedSequence revised +
ReactionlikeEvent revised +
InteractionEvent revised +
EntitySet revised +
Event revised +
GenomeEncodedEntity revised +
DefinedSet revised +
Drug revised +
FailedReaction revised +
CellDevelopmentStep revised +
ChemicalDrug revised +
PhysicalEntity revised +
CellLineagePath revised +
CandidateSet revised +
Depolymerisation revised +
ExternalOntology created 1
CatalystActivity created 1
ChemicalDrug created 1
CellDevelopmentStep created 1
DatabaseIdentifier created 1
_Release created 1
NegativePrecedingEvent created 1
_Deleted created 1
EntityWithAccessionedSequence created 1
ReferenceSequence created 1
ReferenceRNASequence created 1
EntitySet created 1
DatabaseObject created 1
InterChainCrosslinkedResidue created 1
Drug created 1
DefinedSet created 1
MarkerReference created 1
PsiMod created 1
ReplacedResidue created 1
Affiliation created 1
GO_CellularComponent created 1
CrosslinkedResidue created 1
Polymer created 1
RNADrug created 1
FragmentDeletionModification created 1
ReferenceDNASequence created 1
FunctionalStatus created 1
Book created 1
Disease created 1
ReferenceGeneProduct created 1
FragmentModification created 1
_UpdateTracker created 1
InteractionEvent created 1
ReferenceTherapeutic created 1
NegativeRegulation created 1
FunctionalStatusType created 1
RetractionStatus created 1
FrontPage created 1
FragmentReplacedModification created 1
DeletedControlledVocabulary created 1
Pathway created 1
ReactionType created 1
URL created 1
NegativePrecedingEventReason created 1
Requirement created 1
PhysicalEntityCellType created 1
_DeletedInstance created 1
FailedReaction created 1
InstanceEdit created 1
IntraChainCrosslinkedResidue created 1
PhysicalEntity created 1
Publication created 1
GeneticallyModifiedResidue created 1
Regulation created 1
CellLineagePath created 1
CandidateSet created 1
Depolymerisation created 1
Person created 1
Cell created 1
RegulationReference created 1
Figure created 1
Polymerisation created 1
ModifiedResidue created 1
CatalystActivityReference created 1
Anatomy created 1
TranslationalModification created 1
CellType created 1
EntityFunctionalStatus created 1
AbstractModifiedResidue created 1
ReviewStatus created 1
GenomeEncodedEntity created 1
ControlledVocabulary created 1
GO_MolecularFunction created 1
ReferenceGroup created 1
Complex created 1
PathwayDiagram created 1
ReferenceEntity created 1
BlackBoxEvent created 1
FragmentInsertionModification created 1
Summation created 1
PositiveRegulation created 1
Species created 1
NonsenseMutation created 1
LiteratureReference created 1
ReferenceDatabase created 1
StableIdentifier created 1
StableIdentifierReleaseStatus created 1
PositiveGeneExpressionRegulation created 1
DrugActionType created 1
Event created 1
ReactionlikeEvent created 1
ControlReference created 1
NegativeGeneExpressionRegulation created 1
StableIdentifierHistory created 1
Taxon created 1
ReferenceMolecule created 1
Compartment created 1
ModifiedNucleotide created 1
EvidenceType created 1
ReferenceIsoform created 1
ProteinDrug created 1
SimpleEntity created 1
Reaction created 1
GO_BiologicalProcess created 1
TranscriptionalModification created 1
OtherEntity created 1
GroupModifiedResidue created 1
SequenceOntology created 1
Cell edited +
Polymerisation edited +
EntityWithAccessionedSequence edited +
Event edited +
EntitySet edited +
ReactionlikeEvent edited +
InteractionEvent edited +
Drug edited +
GenomeEncodedEntity edited +
DefinedSet edited +
FailedReaction edited +
ChemicalDrug edited +
CellDevelopmentStep edited +
PhysicalEntity edited +
Depolymerisation edited +
CandidateSet edited +
CellLineagePath edited +
Reaction edited +
SimpleEntity edited +
Polymer edited +
RNADrug edited +
OtherEntity edited +
BlackBoxEvent edited +
Complex edited +
Pathway edited +
ProteinDrug edited +
Reaction structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Pathway structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
Event internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
CellDevelopmentStep internalReviewed +
PhysicalEntity reviewed +
CandidateSet reviewed +
Depolymerisation reviewed +
CellLineagePath reviewed +
FailedReaction reviewed +
CellDevelopmentStep reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
EntitySet reviewed +
InteractionEvent reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
DefinedSet reviewed +
Drug reviewed +
Cell reviewed +
Polymerisation reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
ProteinDrug reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
RNADrug reviewed +
SimpleEntity reviewed +
Reaction reviewed +
OtherEntity reviewed +
_Deleted replacementInstances +
ControlledVocabulary modified +
GO_MolecularFunction modified +
PathwayDiagram modified +
ReferenceGroup modified +
Complex modified +
ReferenceEntity modified +
FragmentInsertionModification modified +
BlackBoxEvent modified +
Summation modified +
FailedReaction modified +
IntraChainCrosslinkedResidue modified +
InstanceEdit modified +
_DeletedInstance modified +
Publication modified +
GeneticallyModifiedResidue modified +
PhysicalEntity modified +
Regulation modified +
Depolymerisation modified +
CandidateSet modified +
CellLineagePath modified +
CatalystActivityReference modified +
Person modified +
RegulationReference modified +
Polymerisation modified +
Figure modified +
Cell modified +
ModifiedResidue modified +
TranslationalModification modified +
Anatomy modified +
CellType modified +
GenomeEncodedEntity modified +
EntityFunctionalStatus modified +
AbstractModifiedResidue modified +
ReviewStatus modified +
Taxon modified +
ModifiedNucleotide modified +
ReferenceMolecule modified +
Compartment modified +
ReferenceIsoform modified +
ProteinDrug modified +
EvidenceType modified +
Reaction modified +
SimpleEntity modified +
GO_BiologicalProcess modified +
OtherEntity modified +
TranscriptionalModification modified +
GroupModifiedResidue modified +
SequenceOntology modified +
PositiveRegulation modified +
Species modified +
ReferenceDatabase modified +
NonsenseMutation modified +
LiteratureReference modified +
StableIdentifierReleaseStatus modified +
StableIdentifier modified +
DrugActionType modified +
PositiveGeneExpressionRegulation modified +
ReactionlikeEvent modified +
Event modified +
NegativeGeneExpressionRegulation modified +
ControlReference modified +
StableIdentifierHistory modified +
PsiMod modified +
ReplacedResidue modified +
Affiliation modified +
GO_CellularComponent modified +
RNADrug modified +
Polymer modified +
CrosslinkedResidue modified +
FragmentDeletionModification modified +
CatalystActivity modified +
ExternalOntology modified +
ChemicalDrug modified +
CellDevelopmentStep modified +
_Release modified +
DatabaseIdentifier modified +
NegativePrecedingEvent modified +
EntityWithAccessionedSequence modified +
_Deleted modified +
ReferenceSequence modified +
DatabaseObject modified +
EntitySet modified +
ReferenceRNASequence modified +
DefinedSet modified +
MarkerReference modified +
Drug modified +
InterChainCrosslinkedResidue modified +
FunctionalStatusType modified +
FrontPage modified +
RetractionStatus modified +
FragmentReplacedModification modified +
Pathway modified +
DeletedControlledVocabulary modified +
URL modified +
ReactionType modified +
Requirement modified +
NegativePrecedingEventReason modified +
PhysicalEntityCellType modified +
ReferenceDNASequence modified +
Book modified +
FunctionalStatus modified +
Disease modified +
ReferenceGeneProduct modified +
FragmentModification modified +
ReferenceTherapeutic modified +
InteractionEvent modified +
_UpdateTracker modified +
NegativeRegulation modified +
Complex authored 1
Pathway authored +
ProteinDrug authored 1
SimpleEntity authored 1
Reaction authored +
RNADrug authored 1
Polymer authored 1
OtherEntity authored 1
BlackBoxEvent authored +
FailedReaction authored +
ChemicalDrug authored 1
CellDevelopmentStep authored +
PhysicalEntity authored 1
CandidateSet authored 1
Depolymerisation authored +
CellLineagePath authored +
Cell authored 1
Polymerisation authored +
EntityWithAccessionedSequence authored 1
Event authored +
ReactionlikeEvent authored +
InteractionEvent authored +
EntitySet authored 1
Drug authored 1
GenomeEncodedEntity authored 1
DefinedSet authored 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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