Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
FunctionalStatusType created 1
ReferenceEntity created 1
NegativeGeneExpressionRegulation created 1
NegativeRegulation created 1
ReviewStatus created 1
RNADrug created 1
StableIdentifier created 1
AbstractModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
ReferenceDatabase created 1
DefinedSet created 1
ReferenceDNASequence created 1
CrosslinkedResidue created 1
Disease created 1
SequenceOntology created 1
InstanceEdit created 1
IntraChainCrosslinkedResidue created 1
EntityWithAccessionedSequence created 1
FragmentDeletionModification created 1
NonsenseMutation created 1
FragmentModification created 1
GO_CellularComponent created 1
GO_BiologicalProcess created 1
Publication created 1
OtherEntity created 1
DeletedControlledVocabulary created 1
Requirement created 1
Taxon created 1
NegativePrecedingEventReason created 1
InteractionEvent created 1
CatalystActivityReference created 1
Person created 1
ControlledVocabulary created 1
Compartment created 1
ReferenceTherapeutic created 1
GenomeEncodedEntity created 1
CellType created 1
ReferenceSequence created 1
_DeletedInstance created 1
Drug created 1
Depolymerisation created 1
BlackBoxEvent created 1
ModifiedNucleotide created 1
PathwayDiagram created 1
ReactionlikeEvent created 1
StableIdentifierReleaseStatus created 1
DatabaseIdentifier created 1
ReferenceMolecule created 1
Polymer created 1
URL created 1
Regulation created 1
EntityFunctionalStatus created 1
Cell created 1
EntitySet created 1
CatalystActivity created 1
ProteinDrug created 1
GroupModifiedResidue created 1
CellDevelopmentStep created 1
_Release created 1
LiteratureReference created 1
ChemicalDrug created 1
CellLineagePath created 1
Book created 1
CandidateSet created 1
FrontPage created 1
InterChainCrosslinkedResidue created 1
FunctionalStatus created 1
GO_MolecularFunction created 1
Summation created 1
GeneticallyModifiedResidue created 1
Polymerisation created 1
ReplacedResidue created 1
PhysicalEntity created 1
ModifiedResidue created 1
Anatomy created 1
PhysicalEntityCellType created 1
ReferenceGeneProduct created 1
Figure created 1
TranscriptionalModification created 1
ReferenceRNASequence created 1
ReactionType created 1
ExternalOntology created 1
PsiMod created 1
FragmentInsertionModification created 1
ReferenceIsoform created 1
Pathway created 1
Species created 1
MarkerReference created 1
EvidenceType created 1
Event created 1
_Deleted created 1
ReferenceGroup created 1
RetractionStatus created 1
SimpleEntity created 1
DrugActionType created 1
NegativePrecedingEvent created 1
ControlReference created 1
FragmentReplacedModification created 1
RegulationReference created 1
StableIdentifierHistory created 1
PositiveRegulation created 1
Reaction created 1
_UpdateTracker created 1
DatabaseObject created 1
TranslationalModification created 1
Complex created 1
FailedReaction created 1
Affiliation created 1
Drug revised +
CellLineagePath revised +
Pathway revised +
ChemicalDrug revised +
Event revised +
CandidateSet revised +
Depolymerisation revised +
BlackBoxEvent revised +
RNADrug revised +
ReactionlikeEvent revised +
SimpleEntity revised +
Polymerisation revised +
DefinedSet revised +
Polymer revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
Reaction revised +
Cell revised +
OtherEntity revised +
EntitySet revised +
ProteinDrug revised +
CellDevelopmentStep revised +
InteractionEvent revised +
Complex revised +
FailedReaction revised +
GenomeEncodedEntity revised +
FailedReaction structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
CellLineagePath structureModified +
Event structureModified +
OtherEntity authored 1
ProteinDrug authored 1
EntitySet authored 1
CellDevelopmentStep authored +
Reaction authored +
Cell authored 1
FailedReaction authored +
GenomeEncodedEntity authored 1
Complex authored 1
InteractionEvent authored +
PhysicalEntity authored 1
DefinedSet authored 1
Polymer authored 1
EntityWithAccessionedSequence authored 1
ReactionlikeEvent authored +
Polymerisation authored +
SimpleEntity authored 1
ChemicalDrug authored 1
CellLineagePath authored +
Pathway authored +
Event authored +
Drug authored 1
BlackBoxEvent authored +
Depolymerisation authored +
RNADrug authored 1
CandidateSet authored 1
_Deleted replacementInstances +
EntityFunctionalStatus modified +
Cell modified +
CatalystActivity modified +
EntitySet modified +
ProteinDrug modified +
CellDevelopmentStep modified +
GroupModifiedResidue modified +
ReferenceMolecule modified +
Polymer modified +
Regulation modified +
URL modified +
ReactionlikeEvent modified +
StableIdentifierReleaseStatus modified +
DatabaseIdentifier modified +
ReferenceSequence modified +
_DeletedInstance modified +
Drug modified +
Depolymerisation modified +
BlackBoxEvent modified +
ModifiedNucleotide modified +
PathwayDiagram modified +
OtherEntity modified +
Requirement modified +
DeletedControlledVocabulary modified +
NegativePrecedingEventReason modified +
Taxon modified +
Person modified +
CatalystActivityReference modified +
InteractionEvent modified +
ControlledVocabulary modified +
Compartment modified +
ReferenceTherapeutic modified +
CellType modified +
GenomeEncodedEntity modified +
DefinedSet modified +
ReferenceDNASequence modified +
Disease modified +
CrosslinkedResidue modified +
SequenceOntology modified +
FragmentDeletionModification modified +
IntraChainCrosslinkedResidue modified +
EntityWithAccessionedSequence modified +
InstanceEdit modified +
NonsenseMutation modified +
FragmentModification modified +
GO_BiologicalProcess modified +
GO_CellularComponent modified +
Publication modified +
StableIdentifier modified +
AbstractModifiedResidue modified +
PositiveGeneExpressionRegulation modified +
ReferenceDatabase modified +
FunctionalStatusType modified +
ReferenceEntity modified +
NegativeGeneExpressionRegulation modified +
NegativeRegulation modified +
ReviewStatus modified +
RNADrug modified +
StableIdentifierHistory modified +
PositiveRegulation modified +
Reaction modified +
DatabaseObject modified +
_UpdateTracker modified +
TranslationalModification modified +
Complex modified +
FailedReaction modified +
Affiliation modified +
NegativePrecedingEvent modified +
ControlReference modified +
FragmentReplacedModification modified +
RegulationReference modified +
RetractionStatus modified +
ReferenceGroup modified +
SimpleEntity modified +
DrugActionType modified +
ReferenceIsoform modified +
Species modified +
MarkerReference modified +
Pathway modified +
EvidenceType modified +
Event modified +
_Deleted modified +
ReferenceRNASequence modified +
ReactionType modified +
ExternalOntology modified +
PsiMod modified +
FragmentInsertionModification modified +
ReplacedResidue modified +
PhysicalEntity modified +
Anatomy modified +
ModifiedResidue modified +
ReferenceGeneProduct modified +
PhysicalEntityCellType modified +
Figure modified +
TranscriptionalModification modified +
FunctionalStatus modified +
GO_MolecularFunction modified +
Summation modified +
GeneticallyModifiedResidue modified +
Polymerisation modified +
_Release modified +
LiteratureReference modified +
CellLineagePath modified +
ChemicalDrug modified +
Book modified +
FrontPage modified +
CandidateSet modified +
InterChainCrosslinkedResidue modified +
SimpleEntity edited +
Polymerisation edited +
ReactionlikeEvent edited +
CandidateSet edited +
Depolymerisation edited +
BlackBoxEvent edited +
RNADrug edited +
Drug edited +
CellLineagePath edited +
Pathway edited +
ChemicalDrug edited +
Event edited +
Complex edited +
InteractionEvent edited +
FailedReaction edited +
GenomeEncodedEntity edited +
Reaction edited +
Cell edited +
OtherEntity edited +
ProteinDrug edited +
EntitySet edited +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
DefinedSet edited +
Polymer edited +
PhysicalEntity edited +
Drug reviewed +
Event reviewed +
CellLineagePath reviewed +
Pathway reviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
RNADrug reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
SimpleEntity reviewed +
Polymerisation reviewed +
Polymer reviewed +
DefinedSet reviewed +
PhysicalEntity reviewed +
EntityWithAccessionedSequence reviewed +
Reaction reviewed +
Cell reviewed +
CellDevelopmentStep reviewed +
EntitySet reviewed +
OtherEntity reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
Complex reviewed +
GenomeEncodedEntity reviewed +
FailedReaction reviewed +
Event internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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