Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
FailedReaction internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep edited +
Event edited +
Polymer edited +
Complex edited +
EntitySet edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
GenomeEncodedEntity edited +
FailedReaction edited +
Drug edited +
SimpleEntity edited +
Pathway edited +
RNADrug edited +
Depolymerisation edited +
BlackBoxEvent edited +
Cell edited +
ChemicalDrug edited +
CellLineagePath edited +
Polymerisation edited +
DefinedSet edited +
Reaction edited +
InteractionEvent edited +
OtherEntity edited +
PhysicalEntity edited +
ProteinDrug edited +
SimpleEntity revised +
Drug revised +
EntityWithAccessionedSequence revised +
FailedReaction revised +
GenomeEncodedEntity revised +
ReactionlikeEvent revised +
CellDevelopmentStep revised +
Event revised +
Complex revised +
CandidateSet revised +
Polymer revised +
EntitySet revised +
ProteinDrug revised +
PhysicalEntity revised +
OtherEntity revised +
InteractionEvent revised +
Reaction revised +
Cell revised +
DefinedSet revised +
Polymerisation revised +
CellLineagePath revised +
ChemicalDrug revised +
Depolymerisation revised +
RNADrug revised +
Pathway revised +
BlackBoxEvent revised +
_Deleted replacementInstances +
ProteinDrug reviewed +
PhysicalEntity reviewed +
OtherEntity reviewed +
InteractionEvent reviewed +
Reaction reviewed +
DefinedSet reviewed +
Polymerisation reviewed +
ChemicalDrug reviewed +
CellLineagePath reviewed +
Cell reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
RNADrug reviewed +
Pathway reviewed +
SimpleEntity reviewed +
Drug reviewed +
FailedReaction reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
EntityWithAccessionedSequence reviewed +
Event reviewed +
Complex reviewed +
Polymer reviewed +
EntitySet reviewed +
CandidateSet reviewed +
CellDevelopmentStep reviewed +
RegulationReference created 1
FragmentDeletionModification created 1
Requirement created 1
Figure created 1
Complex created 1
StableIdentifierReleaseStatus created 1
Disease created 1
PathwayDiagram created 1
DatabaseIdentifier created 1
AbstractModifiedResidue created 1
SequenceOntology created 1
FunctionalStatus created 1
Drug created 1
Publication created 1
DefinedSet created 1
InstanceEdit created 1
Cell created 1
TranslationalModification created 1
URL created 1
ReferenceGroup created 1
ControlReference created 1
OtherEntity created 1
Regulation created 1
ReviewStatus created 1
Reaction created 1
GroupModifiedResidue created 1
FailedReaction created 1
ReferenceTherapeutic created 1
ReactionlikeEvent created 1
CrosslinkedResidue created 1
Event created 1
CellDevelopmentStep created 1
NonsenseMutation created 1
ReferenceDNASequence created 1
_UpdateTracker created 1
EvidenceType created 1
PositiveRegulation created 1
CatalystActivity created 1
Summation created 1
ChemicalDrug created 1
ReferenceDatabase created 1
ModifiedResidue created 1
Book created 1
_Release created 1
DrugActionType created 1
NegativeGeneExpressionRegulation created 1
PhysicalEntity created 1
CatalystActivityReference created 1
ReferenceEntity created 1
LiteratureReference created 1
FragmentModification created 1
GenomeEncodedEntity created 1
TranscriptionalModification created 1
ModifiedNucleotide created 1
MarkerReference created 1
ReactionType created 1
EntitySet created 1
CandidateSet created 1
PsiMod created 1
ExternalOntology created 1
FunctionalStatusType created 1
SimpleEntity created 1
ControlledVocabulary created 1
EntityFunctionalStatus created 1
InterChainCrosslinkedResidue created 1
ReferenceRNASequence created 1
StableIdentifier created 1
CellLineagePath created 1
FragmentInsertionModification created 1
ReplacedResidue created 1
Affiliation created 1
PositiveGeneExpressionRegulation created 1
Species created 1
BlackBoxEvent created 1
Person created 1
_Deleted created 1
ReferenceSequence created 1
Depolymerisation created 1
NegativeRegulation created 1
GO_BiologicalProcess created 1
ProteinDrug created 1
GO_CellularComponent created 1
InteractionEvent created 1
StableIdentifierHistory created 1
ReferenceIsoform created 1
FrontPage created 1
EntityWithAccessionedSequence created 1
ReferenceGeneProduct created 1
DeletedControlledVocabulary created 1
Polymer created 1
DatabaseObject created 1
RetractionStatus created 1
FragmentReplacedModification created 1
GeneticallyModifiedResidue created 1
ReferenceMolecule created 1
Taxon created 1
Polymerisation created 1
CellType created 1
Anatomy created 1
RNADrug created 1
Compartment created 1
Pathway created 1
IntraChainCrosslinkedResidue created 1
_DeletedInstance created 1
NegativePrecedingEvent created 1
PhysicalEntityCellType created 1
NegativePrecedingEventReason created 1
GO_MolecularFunction created 1
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
Event structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
Reaction structureModified +
RNADrug modified +
Compartment modified +
Pathway modified +
IntraChainCrosslinkedResidue modified +
_DeletedInstance modified +
CellType modified +
Anatomy modified +
Polymerisation modified +
GO_MolecularFunction modified +
NegativePrecedingEventReason modified +
PhysicalEntityCellType modified +
NegativePrecedingEvent modified +
RetractionStatus modified +
Polymer modified +
DeletedControlledVocabulary modified +
DatabaseObject modified +
EntityWithAccessionedSequence modified +
ReferenceGeneProduct modified +
ReferenceIsoform modified +
FrontPage modified +
ReferenceMolecule modified +
Taxon modified +
GeneticallyModifiedResidue modified +
FragmentReplacedModification modified +
Depolymerisation modified +
BlackBoxEvent modified +
Person modified +
PositiveGeneExpressionRegulation modified +
Species modified +
ReferenceSequence modified +
_Deleted modified +
Affiliation modified +
StableIdentifier modified +
FragmentInsertionModification modified +
ReplacedResidue modified +
CellLineagePath modified +
InteractionEvent modified +
StableIdentifierHistory modified +
ProteinDrug modified +
GO_CellularComponent modified +
GO_BiologicalProcess modified +
NegativeRegulation modified +
PsiMod modified +
CandidateSet modified +
ReactionType modified +
EntitySet modified +
TranscriptionalModification modified +
MarkerReference modified +
ModifiedNucleotide modified +
FragmentModification modified +
LiteratureReference modified +
GenomeEncodedEntity modified +
EntityFunctionalStatus modified +
InterChainCrosslinkedResidue modified +
ReferenceRNASequence modified +
ControlledVocabulary modified +
ExternalOntology modified +
FunctionalStatusType modified +
SimpleEntity modified +
ModifiedResidue modified +
ReferenceDatabase modified +
Summation modified +
ChemicalDrug modified +
CatalystActivityReference modified +
ReferenceEntity modified +
PhysicalEntity modified +
DrugActionType modified +
_Release modified +
Book modified +
NegativeGeneExpressionRegulation modified +
CellDevelopmentStep modified +
NonsenseMutation modified +
Event modified +
FailedReaction modified +
ReactionlikeEvent modified +
ReferenceTherapeutic modified +
CrosslinkedResidue modified +
EvidenceType modified +
PositiveRegulation modified +
CatalystActivity modified +
ReferenceDNASequence modified +
_UpdateTracker modified +
TranslationalModification modified +
Cell modified +
InstanceEdit modified +
DefinedSet modified +
OtherEntity modified +
ControlReference modified +
Regulation modified +
GroupModifiedResidue modified +
Reaction modified +
ReviewStatus modified +
ReferenceGroup modified +
URL modified +
StableIdentifierReleaseStatus modified +
Complex modified +
Figure modified +
RegulationReference modified +
Requirement modified +
FragmentDeletionModification modified +
Drug modified +
Publication modified +
SequenceOntology modified +
FunctionalStatus modified +
Disease modified +
AbstractModifiedResidue modified +
DatabaseIdentifier modified +
PathwayDiagram modified +
Drug authored 1
SimpleEntity authored 1
CellDevelopmentStep authored +
EntitySet authored 1
Event authored +
Complex authored 1
Polymer authored 1
CandidateSet authored 1
EntityWithAccessionedSequence authored 1
ReactionlikeEvent authored +
GenomeEncodedEntity authored 1
FailedReaction authored +
Reaction authored +
OtherEntity authored 1
InteractionEvent authored +
PhysicalEntity authored 1
ProteinDrug authored 1
Pathway authored +
Depolymerisation authored +
RNADrug authored 1
BlackBoxEvent authored +
Cell authored 1
ChemicalDrug authored 1
CellLineagePath authored +
Polymerisation authored +
DefinedSet authored 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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