Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Depolymerisation structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
Reaction structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
_Deleted replacementInstances +
_Deleted modified +
Drug modified +
Polymer modified +
RegulationReference modified +
_DeletedInstance modified +
MarkerReference modified +
StableIdentifierReleaseStatus modified +
CellDevelopmentStep modified +
BlackBoxEvent modified +
Event modified +
NonsenseMutation modified +
Depolymerisation modified +
DatabaseIdentifier modified +
TranslationalModification modified +
AbstractModifiedResidue modified +
CatalystActivityReference modified +
FragmentModification modified +
IntraChainCrosslinkedResidue modified +
CatalystActivity modified +
Requirement modified +
DrugActionType modified +
SimpleEntity modified +
ReplacedResidue modified +
InstanceEdit modified +
StableIdentifier modified +
ReactionType modified +
PathwayDiagram modified +
_Release modified +
ModifiedNucleotide modified +
EntitySet modified +
FrontPage modified +
ChemicalDrug modified +
Species modified +
GenomeEncodedEntity modified +
StableIdentifierHistory modified +
NegativeGeneExpressionRegulation modified +
SequenceOntology modified +
_UpdateTracker modified +
TranscriptionalModification modified +
ControlledVocabulary modified +
GO_MolecularFunction modified +
CellLineagePath modified +
ReactionlikeEvent modified +
NegativePrecedingEventReason modified +
Complex modified +
Affiliation modified +
EvidenceType modified +
RetractionStatus modified +
DeletedControlledVocabulary modified +
PositiveGeneExpressionRegulation modified +
FragmentInsertionModification modified +
Book modified +
NegativePrecedingEvent modified +
OtherEntity modified +
DatabaseObject modified +
Taxon modified +
InteractionEvent modified +
PsiMod modified +
ReferenceTherapeutic modified +
ReferenceGeneProduct modified +
Regulation modified +
GO_BiologicalProcess modified +
URL modified +
EntityWithAccessionedSequence modified +
NegativeRegulation modified +
Cell modified +
ReferenceIsoform modified +
ControlReference modified +
FailedReaction modified +
InterChainCrosslinkedResidue modified +
ProteinDrug modified +
FunctionalStatus modified +
Compartment modified +
ReferenceEntity modified +
PositiveRegulation modified +
Anatomy modified +
RNADrug modified +
FragmentReplacedModification modified +
FragmentDeletionModification modified +
Publication modified +
Person modified +
ExternalOntology modified +
Summation modified +
ReferenceGroup modified +
LiteratureReference modified +
FunctionalStatusType modified +
PhysicalEntity modified +
CrosslinkedResidue modified +
ModifiedResidue modified +
ReviewStatus modified +
Disease modified +
GO_CellularComponent modified +
EntityFunctionalStatus modified +
ReferenceSequence modified +
ReferenceDNASequence modified +
GroupModifiedResidue modified +
DefinedSet modified +
CellType modified +
Pathway modified +
CandidateSet modified +
ReferenceRNASequence modified +
PhysicalEntityCellType modified +
Polymerisation modified +
Reaction modified +
ReferenceDatabase modified +
GeneticallyModifiedResidue modified +
Figure modified +
ReferenceMolecule modified +
IntraChainCrosslinkedResidue created 1
Requirement created 1
CatalystActivity created 1
DrugActionType created 1
InstanceEdit created 1
ReplacedResidue created 1
SimpleEntity created 1
RegulationReference created 1
Drug created 1
Polymer created 1
_Deleted created 1
Event created 1
BlackBoxEvent created 1
CellDevelopmentStep created 1
_DeletedInstance created 1
StableIdentifierReleaseStatus created 1
MarkerReference created 1
Depolymerisation created 1
NonsenseMutation created 1
FragmentModification created 1
CatalystActivityReference created 1
AbstractModifiedResidue created 1
TranslationalModification created 1
DatabaseIdentifier created 1
ReactionlikeEvent created 1
CellLineagePath created 1
DeletedControlledVocabulary created 1
Affiliation created 1
EvidenceType created 1
RetractionStatus created 1
Complex created 1
NegativePrecedingEventReason created 1
Book created 1
FragmentInsertionModification created 1
PositiveGeneExpressionRegulation created 1
Taxon created 1
DatabaseObject created 1
OtherEntity created 1
NegativePrecedingEvent created 1
ReactionType created 1
StableIdentifier created 1
EntitySet created 1
_Release created 1
ModifiedNucleotide created 1
PathwayDiagram created 1
SequenceOntology created 1
_UpdateTracker created 1
TranscriptionalModification created 1
StableIdentifierHistory created 1
NegativeGeneExpressionRegulation created 1
GenomeEncodedEntity created 1
Species created 1
ChemicalDrug created 1
FrontPage created 1
GO_MolecularFunction created 1
ControlledVocabulary created 1
ProteinDrug created 1
ReferenceEntity created 1
Compartment created 1
FunctionalStatus created 1
Anatomy created 1
PositiveRegulation created 1
ReferenceTherapeutic created 1
PsiMod created 1
InteractionEvent created 1
URL created 1
EntityWithAccessionedSequence created 1
GO_BiologicalProcess created 1
Regulation created 1
ReferenceGeneProduct created 1
ReferenceIsoform created 1
NegativeRegulation created 1
Cell created 1
InterChainCrosslinkedResidue created 1
FailedReaction created 1
ControlReference created 1
DefinedSet created 1
ReferenceDNASequence created 1
GroupModifiedResidue created 1
ReferenceSequence created 1
Polymerisation created 1
Reaction created 1
PhysicalEntityCellType created 1
Pathway created 1
CellType created 1
CandidateSet created 1
ReferenceRNASequence created 1
Figure created 1
GeneticallyModifiedResidue created 1
ReferenceDatabase created 1
ReferenceMolecule created 1
Summation created 1
Person created 1
ExternalOntology created 1
FragmentDeletionModification created 1
Publication created 1
RNADrug created 1
FragmentReplacedModification created 1
LiteratureReference created 1
ReferenceGroup created 1
FunctionalStatusType created 1
Disease created 1
ReviewStatus created 1
GO_CellularComponent created 1
EntityFunctionalStatus created 1
ModifiedResidue created 1
CrosslinkedResidue created 1
PhysicalEntity created 1
FailedReaction authored +
PhysicalEntity authored 1
ChemicalDrug authored 1
Cell authored 1
Depolymerisation authored +
GenomeEncodedEntity authored 1
Event authored +
EntitySet authored 1
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
CellDevelopmentStep authored +
RNADrug authored 1
InteractionEvent authored +
Drug authored 1
Polymer authored 1
OtherEntity authored 1
SimpleEntity authored 1
Complex authored 1
Pathway authored +
CandidateSet authored 1
Reaction authored +
Polymerisation authored +
ReactionlikeEvent authored +
CellLineagePath authored +
ProteinDrug authored 1
DefinedSet authored 1
Polymerisation edited +
Reaction edited +
Complex edited +
CandidateSet edited +
Pathway edited +
ProteinDrug edited +
DefinedSet edited +
ReactionlikeEvent edited +
CellLineagePath edited +
OtherEntity edited +
SimpleEntity edited +
EntitySet edited +
BlackBoxEvent edited +
EntityWithAccessionedSequence edited +
Event edited +
CellDevelopmentStep edited +
Drug edited +
Polymer edited +
RNADrug edited +
InteractionEvent edited +
PhysicalEntity edited +
FailedReaction edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
ChemicalDrug edited +
Cell edited +
Polymer reviewed +
Drug reviewed +
InteractionEvent reviewed +
RNADrug reviewed +
EntitySet reviewed +
Event reviewed +
EntityWithAccessionedSequence reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
Depolymerisation reviewed +
GenomeEncodedEntity reviewed +
ChemicalDrug reviewed +
Cell reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
DefinedSet reviewed +
ReactionlikeEvent reviewed +
CellLineagePath reviewed +
Reaction reviewed +
Polymerisation reviewed +
Complex reviewed +
Pathway reviewed +
CandidateSet reviewed +
SimpleEntity reviewed +
OtherEntity reviewed +
SimpleEntity revised +
OtherEntity revised +
Reaction revised +
Polymerisation revised +
Complex revised +
Pathway revised +
CandidateSet revised +
DefinedSet revised +
ProteinDrug revised +
ReactionlikeEvent revised +
CellLineagePath revised +
PhysicalEntity revised +
FailedReaction revised +
Depolymerisation revised +
GenomeEncodedEntity revised +
ChemicalDrug revised +
Cell revised +
EntitySet revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
Event revised +
CellDevelopmentStep revised +
Drug revised +
Polymer revised +
InteractionEvent revised +
RNADrug revised +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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