Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent edited +
ProteinDrug edited +
RNADrug edited +
EntitySet edited +
Event edited +
Drug edited +
Polymerisation edited +
CellDevelopmentStep edited +
GenomeEncodedEntity edited +
ChemicalDrug edited +
FailedReaction edited +
Reaction edited +
PhysicalEntity edited +
Complex edited +
OtherEntity edited +
SimpleEntity edited +
Cell edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
Polymer edited +
DefinedSet edited +
BlackBoxEvent edited +
Pathway edited +
Depolymerisation edited +
CandidateSet edited +
InteractionEvent edited +
ReactionlikeEvent structureModified +
Event structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
Pathway structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
PhysicalEntity authored 1
ChemicalDrug authored 1
FailedReaction authored +
Reaction authored +
OtherEntity authored 1
Complex authored 1
ReactionlikeEvent authored +
GenomeEncodedEntity authored 1
CellDevelopmentStep authored +
Polymerisation authored +
Event authored +
Drug authored 1
RNADrug authored 1
ProteinDrug authored 1
EntitySet authored 1
BlackBoxEvent authored +
DefinedSet authored 1
Polymer authored 1
CellLineagePath authored +
InteractionEvent authored +
CandidateSet authored 1
Pathway authored +
Depolymerisation authored +
SimpleEntity authored 1
Cell authored 1
EntityWithAccessionedSequence authored 1
DefinedSet reviewed +
BlackBoxEvent reviewed +
CellLineagePath reviewed +
Polymer reviewed +
CandidateSet reviewed +
InteractionEvent reviewed +
Pathway reviewed +
Depolymerisation reviewed +
Cell reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
Reaction reviewed +
OtherEntity reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
Polymerisation reviewed +
GenomeEncodedEntity reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
EntitySet reviewed +
RNADrug reviewed +
Drug reviewed +
Event reviewed +
Cell revised +
SimpleEntity revised +
EntityWithAccessionedSequence revised +
Polymer revised +
CellLineagePath revised +
DefinedSet revised +
BlackBoxEvent revised +
Pathway revised +
Depolymerisation revised +
InteractionEvent revised +
CandidateSet revised +
ReactionlikeEvent revised +
Event revised +
Drug revised +
EntitySet revised +
ProteinDrug revised +
RNADrug revised +
CellDevelopmentStep revised +
GenomeEncodedEntity revised +
Polymerisation revised +
FailedReaction revised +
ChemicalDrug revised +
Reaction revised +
PhysicalEntity revised +
Complex revised +
OtherEntity revised +
Pathway internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Figure modified +
FunctionalStatusType modified +
CellDevelopmentStep modified +
_DeletedInstance modified +
FragmentReplacedModification modified +
InterChainCrosslinkedResidue modified +
Complex modified +
ReferenceMolecule modified +
ReferenceDNASequence modified +
ControlledVocabulary modified +
GO_BiologicalProcess modified +
ControlReference modified +
ReferenceIsoform modified +
PhysicalEntityCellType modified +
NegativePrecedingEventReason modified +
_Release modified +
Taxon modified +
NegativeGeneExpressionRegulation modified +
Person modified +
Anatomy modified +
FrontPage modified +
ReferenceEntity modified +
DeletedControlledVocabulary modified +
GeneticallyModifiedResidue modified +
Depolymerisation modified +
ReferenceGroup modified +
Book modified +
CandidateSet modified +
TranscriptionalModification modified +
PositiveGeneExpressionRegulation modified +
CellLineagePath modified +
DefinedSet modified +
ReferenceDatabase modified +
ReferenceGeneProduct modified +
ProteinDrug modified +
GO_MolecularFunction modified +
Publication modified +
FailedReaction modified +
ChemicalDrug modified +
Compartment modified +
CatalystActivity modified +
NegativePrecedingEvent modified +
ReferenceSequence modified +
ReactionType modified +
EntityWithAccessionedSequence modified +
ReviewStatus modified +
PositiveRegulation modified +
URL modified +
Regulation modified +
ReferenceRNASequence modified +
SequenceOntology modified +
MarkerReference modified +
Pathway modified +
InteractionEvent modified +
NegativeRegulation modified +
StableIdentifierHistory modified +
EntityFunctionalStatus modified +
GroupModifiedResidue modified +
DatabaseIdentifier modified +
Drug modified +
AbstractModifiedResidue modified +
RNADrug modified +
EntitySet modified +
ReplacedResidue modified +
LiteratureReference modified +
GenomeEncodedEntity modified +
Polymerisation modified +
RegulationReference modified +
DatabaseObject modified +
Requirement modified +
Affiliation modified +
OtherEntity modified +
FragmentInsertionModification modified +
DrugActionType modified +
TranslationalModification modified +
Disease modified +
PsiMod modified +
_UpdateTracker modified +
StableIdentifier modified +
InstanceEdit modified +
Cell modified +
RetractionStatus modified +
BlackBoxEvent modified +
Event modified +
PathwayDiagram modified +
FragmentDeletionModification modified +
ReactionlikeEvent modified +
ModifiedResidue modified +
FragmentModification modified +
CrosslinkedResidue modified +
ModifiedNucleotide modified +
FunctionalStatus modified +
ReferenceTherapeutic modified +
IntraChainCrosslinkedResidue modified +
Reaction modified +
CellType modified +
Summation modified +
PhysicalEntity modified +
StableIdentifierReleaseStatus modified +
Species modified +
SimpleEntity modified +
NonsenseMutation modified +
ExternalOntology modified +
EvidenceType modified +
Polymer modified +
GO_CellularComponent modified +
CatalystActivityReference modified +
_Deleted modified +
ReferenceSequence created 1
NegativePrecedingEvent created 1
ReactionType created 1
CatalystActivity created 1
Compartment created 1
FailedReaction created 1
ChemicalDrug created 1
Publication created 1
GO_MolecularFunction created 1
ProteinDrug created 1
ReferenceGeneProduct created 1
DatabaseIdentifier created 1
GroupModifiedResidue created 1
EntityFunctionalStatus created 1
StableIdentifierHistory created 1
NegativeRegulation created 1
InteractionEvent created 1
MarkerReference created 1
SequenceOntology created 1
Pathway created 1
ReferenceRNASequence created 1
Regulation created 1
URL created 1
PositiveRegulation created 1
ReviewStatus created 1
EntityWithAccessionedSequence created 1
ReferenceIsoform created 1
ControlReference created 1
GO_BiologicalProcess created 1
ControlledVocabulary created 1
ReferenceDNASequence created 1
ReferenceMolecule created 1
Complex created 1
InterChainCrosslinkedResidue created 1
_DeletedInstance created 1
FragmentReplacedModification created 1
CellDevelopmentStep created 1
FunctionalStatusType created 1
Figure created 1
DefinedSet created 1
ReferenceDatabase created 1
CellLineagePath created 1
PositiveGeneExpressionRegulation created 1
Book created 1
CandidateSet created 1
TranscriptionalModification created 1
ReferenceGroup created 1
Depolymerisation created 1
GeneticallyModifiedResidue created 1
DeletedControlledVocabulary created 1
FrontPage created 1
ReferenceEntity created 1
Anatomy created 1
Person created 1
NegativeGeneExpressionRegulation created 1
Taxon created 1
_Release created 1
PhysicalEntityCellType created 1
NegativePrecedingEventReason created 1
PhysicalEntity created 1
Summation created 1
CellType created 1
Reaction created 1
IntraChainCrosslinkedResidue created 1
ReferenceTherapeutic created 1
FunctionalStatus created 1
ModifiedNucleotide created 1
CrosslinkedResidue created 1
ModifiedResidue created 1
FragmentModification created 1
ReactionlikeEvent created 1
FragmentDeletionModification created 1
PathwayDiagram created 1
Event created 1
CatalystActivityReference created 1
_Deleted created 1
GO_CellularComponent created 1
Polymer created 1
EvidenceType created 1
ExternalOntology created 1
NonsenseMutation created 1
SimpleEntity created 1
Species created 1
StableIdentifierReleaseStatus created 1
_UpdateTracker created 1
PsiMod created 1
Disease created 1
TranslationalModification created 1
DrugActionType created 1
Affiliation created 1
Requirement created 1
OtherEntity created 1
FragmentInsertionModification created 1
DatabaseObject created 1
RegulationReference created 1
Polymerisation created 1
GenomeEncodedEntity created 1
LiteratureReference created 1
ReplacedResidue created 1
EntitySet created 1
RNADrug created 1
AbstractModifiedResidue created 1
Drug created 1
BlackBoxEvent created 1
RetractionStatus created 1
Cell created 1
InstanceEdit created 1
StableIdentifier created 1
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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