Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
NegativeGeneExpressionRegulation created 1
Compartment created 1
CatalystActivityReference created 1
ModifiedResidue created 1
FragmentDeletionModification created 1
CellDevelopmentStep created 1
ReferenceEntity created 1
Complex created 1
GeneticallyModifiedResidue created 1
Polymer created 1
ReferenceGroup created 1
ReferenceIsoform created 1
DrugActionType created 1
ReferenceDNASequence created 1
FrontPage created 1
Figure created 1
SimpleEntity created 1
FragmentReplacedModification created 1
BlackBoxEvent created 1
NonsenseMutation created 1
Requirement created 1
GO_CellularComponent created 1
Summation created 1
DatabaseIdentifier created 1
Pathway created 1
URL created 1
DeletedControlledVocabulary created 1
ReferenceRNASequence created 1
TranscriptionalModification created 1
PhysicalEntityCellType created 1
GO_MolecularFunction created 1
FunctionalStatus created 1
Event created 1
_DeletedInstance created 1
NegativePrecedingEventReason created 1
StableIdentifierHistory created 1
ReferenceSequence created 1
ReferenceDatabase created 1
_Release created 1
Cell created 1
AbstractModifiedResidue created 1
NegativeRegulation created 1
StableIdentifierReleaseStatus created 1
LiteratureReference created 1
DatabaseObject created 1
FragmentModification created 1
OtherEntity created 1
InterChainCrosslinkedResidue created 1
ReferenceTherapeutic created 1
PathwayDiagram created 1
Species created 1
ExternalOntology created 1
ReactionlikeEvent created 1
CrosslinkedResidue created 1
InteractionEvent created 1
ReactionType created 1
StableIdentifier created 1
Anatomy created 1
Affiliation created 1
PhysicalEntity created 1
IntraChainCrosslinkedResidue created 1
RNADrug created 1
Taxon created 1
Publication created 1
InstanceEdit created 1
EvidenceType created 1
Depolymerisation created 1
Person created 1
FunctionalStatusType created 1
GO_BiologicalProcess created 1
FailedReaction created 1
GenomeEncodedEntity created 1
TranslationalModification created 1
CatalystActivity created 1
FragmentInsertionModification created 1
EntitySet created 1
MarkerReference created 1
PositiveRegulation created 1
ControlledVocabulary created 1
PsiMod created 1
Book created 1
CellType created 1
RetractionStatus created 1
DefinedSet created 1
CellLineagePath created 1
ProteinDrug created 1
ControlReference created 1
_Deleted created 1
ReferenceMolecule created 1
_UpdateTracker created 1
GroupModifiedResidue created 1
SequenceOntology created 1
ChemicalDrug created 1
PositiveGeneExpressionRegulation created 1
ModifiedNucleotide created 1
Drug created 1
ReferenceGeneProduct created 1
EntityWithAccessionedSequence created 1
ReplacedResidue created 1
CandidateSet created 1
RegulationReference created 1
EntityFunctionalStatus created 1
Regulation created 1
NegativePrecedingEvent created 1
Reaction created 1
Disease created 1
ReviewStatus created 1
Polymerisation created 1
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Event authored +
ProteinDrug authored 1
Polymer authored 1
PhysicalEntity authored 1
Complex authored 1
CellDevelopmentStep authored +
Cell authored 1
ChemicalDrug authored 1
SimpleEntity authored 1
BlackBoxEvent authored +
RNADrug authored 1
OtherEntity authored 1
EntityWithAccessionedSequence authored 1
Drug authored 1
Depolymerisation authored +
CandidateSet authored 1
GenomeEncodedEntity authored 1
EntitySet authored 1
ReactionlikeEvent authored +
Pathway authored +
FailedReaction authored +
InteractionEvent authored +
Reaction authored +
DefinedSet authored 1
CellLineagePath authored +
Polymerisation authored +
Reaction structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
Pathway structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
ProteinDrug reviewed +
Event reviewed +
Polymer reviewed +
PhysicalEntity reviewed +
CellDevelopmentStep reviewed +
Complex reviewed +
Cell reviewed +
SimpleEntity reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
RNADrug reviewed +
OtherEntity reviewed +
EntityWithAccessionedSequence reviewed +
Drug reviewed +
Depolymerisation reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
Pathway reviewed +
FailedReaction reviewed +
InteractionEvent reviewed +
Reaction reviewed +
DefinedSet reviewed +
Polymerisation reviewed +
CellLineagePath reviewed +
Reaction revised +
DefinedSet revised +
CellLineagePath revised +
Polymerisation revised +
FailedReaction revised +
Pathway revised +
ReactionlikeEvent revised +
EntitySet revised +
GenomeEncodedEntity revised +
CandidateSet revised +
InteractionEvent revised +
RNADrug revised +
BlackBoxEvent revised +
SimpleEntity revised +
ChemicalDrug revised +
Depolymerisation revised +
Drug revised +
EntityWithAccessionedSequence revised +
OtherEntity revised +
Event revised +
ProteinDrug revised +
Complex revised +
CellDevelopmentStep revised +
Cell revised +
PhysicalEntity revised +
Polymer revised +
_Deleted replacementInstances +
EntityWithAccessionedSequence modified +
ReferenceGeneProduct modified +
Drug modified +
ChemicalDrug modified +
PositiveGeneExpressionRegulation modified +
ModifiedNucleotide modified +
_UpdateTracker modified +
SequenceOntology modified +
GroupModifiedResidue modified +
_Deleted modified +
ReferenceMolecule modified +
ControlReference modified +
ProteinDrug modified +
Polymerisation modified +
Disease modified +
ReviewStatus modified +
Reaction modified +
NegativePrecedingEvent modified +
Regulation modified +
CandidateSet modified +
ReplacedResidue modified +
RegulationReference modified +
EntityFunctionalStatus modified +
Person modified +
FunctionalStatusType modified +
EvidenceType modified +
InstanceEdit modified +
Depolymerisation modified +
IntraChainCrosslinkedResidue modified +
Taxon modified +
RNADrug modified +
Publication modified +
PhysicalEntity modified +
StableIdentifier modified +
Anatomy modified +
Affiliation modified +
RetractionStatus modified +
DefinedSet modified +
CellLineagePath modified +
CellType modified +
PsiMod modified +
Book modified +
ControlledVocabulary modified +
PositiveRegulation modified +
MarkerReference modified +
TranslationalModification modified +
GenomeEncodedEntity modified +
CatalystActivity modified +
FragmentInsertionModification modified +
EntitySet modified +
FailedReaction modified +
GO_BiologicalProcess modified +
OtherEntity modified +
InterChainCrosslinkedResidue modified +
ReferenceTherapeutic modified +
StableIdentifierReleaseStatus modified +
DatabaseObject modified +
LiteratureReference modified +
FragmentModification modified +
NegativeRegulation modified +
_Release modified +
ReferenceDatabase modified +
Cell modified +
AbstractModifiedResidue modified +
NegativePrecedingEventReason modified +
_DeletedInstance modified +
StableIdentifierHistory modified +
ReferenceSequence modified +
FunctionalStatus modified +
Event modified +
ReactionType modified +
InteractionEvent modified +
CrosslinkedResidue modified +
Species modified +
ExternalOntology modified +
ReactionlikeEvent modified +
PathwayDiagram modified +
Summation modified +
GO_CellularComponent modified +
DatabaseIdentifier modified +
Requirement modified +
FragmentReplacedModification modified +
Figure modified +
SimpleEntity modified +
NonsenseMutation modified +
BlackBoxEvent modified +
ReferenceDNASequence modified +
DrugActionType modified +
FrontPage modified +
ReferenceGroup modified +
Polymer modified +
ReferenceIsoform modified +
CellDevelopmentStep modified +
ReferenceEntity modified +
Complex modified +
GeneticallyModifiedResidue modified +
Compartment modified +
ModifiedResidue modified +
CatalystActivityReference modified +
FragmentDeletionModification modified +
NegativeGeneExpressionRegulation modified +
GO_MolecularFunction modified +
PhysicalEntityCellType modified +
TranscriptionalModification modified +
ReferenceRNASequence modified +
Pathway modified +
URL modified +
DeletedControlledVocabulary modified +
Depolymerisation edited +
Drug edited +
EntityWithAccessionedSequence edited +
OtherEntity edited +
RNADrug edited +
BlackBoxEvent edited +
SimpleEntity edited +
ChemicalDrug edited +
CellDevelopmentStep edited +
Complex edited +
Cell edited +
PhysicalEntity edited +
Polymer edited +
Event edited +
ProteinDrug edited +
DefinedSet edited +
CellLineagePath edited +
Polymerisation edited +
Reaction edited +
InteractionEvent edited +
FailedReaction edited +
Pathway edited +
ReactionlikeEvent edited +
EntitySet edited +
CandidateSet edited +
GenomeEncodedEntity edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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