Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
Cell authored 1
Drug authored 1
Complex authored 1
SimpleEntity authored 1
ProteinDrug authored 1
CellLineagePath authored +
OtherEntity authored 1
Pathway authored +
ReactionlikeEvent authored +
Event authored +
BlackBoxEvent authored +
InteractionEvent authored +
Polymer authored 1
GenomeEncodedEntity authored 1
EntityWithAccessionedSequence authored 1
CellDevelopmentStep authored +
Polymerisation authored +
CandidateSet authored 1
DefinedSet authored 1
Depolymerisation authored +
EntitySet authored 1
RNADrug authored 1
Reaction authored +
FailedReaction authored +
ChemicalDrug authored 1
PhysicalEntity authored 1
StableIdentifier modified +
InterChainCrosslinkedResidue modified +
EntitySet modified +
ControlledVocabulary modified +
ModifiedNucleotide modified +
ReferenceTherapeutic modified +
GenomeEncodedEntity modified +
IntraChainCrosslinkedResidue modified +
NonsenseMutation modified +
InstanceEdit modified +
InteractionEvent modified +
_UpdateTracker modified +
DeletedControlledVocabulary modified +
CrosslinkedResidue modified +
URL modified +
TranslationalModification modified +
CellLineagePath modified +
ReferenceSequence modified +
Figure modified +
ControlReference modified +
GO_BiologicalProcess modified +
_Deleted modified +
AbstractModifiedResidue modified +
NegativePrecedingEventReason modified +
PhysicalEntity modified +
Depolymerisation modified +
FragmentInsertionModification modified +
Anatomy modified +
Requirement modified +
ReactionType modified +
ReferenceRNASequence modified +
FunctionalStatus modified +
SequenceOntology modified +
Compartment modified +
NegativeGeneExpressionRegulation modified +
ReferenceEntity modified +
RegulationReference modified +
ReferenceGeneProduct modified +
DrugActionType modified +
ReactionlikeEvent modified +
_DeletedInstance modified +
StableIdentifierReleaseStatus modified +
StableIdentifierHistory modified +
Complex modified +
ExternalOntology modified +
PathwayDiagram modified +
Book modified +
Disease modified +
ReferenceDNASequence modified +
ChemicalDrug modified +
Regulation modified +
Reaction modified +
Polymerisation modified +
DefinedSet modified +
FragmentDeletionModification modified +
LiteratureReference modified +
EntityWithAccessionedSequence modified +
GO_MolecularFunction modified +
ReplacedResidue modified +
FrontPage modified +
CatalystActivity modified +
CellType modified +
_Release modified +
FragmentModification modified +
MarkerReference modified +
ReferenceDatabase modified +
Pathway modified +
OtherEntity modified +
ReferenceIsoform modified +
GeneticallyModifiedResidue modified +
SimpleEntity modified +
ProteinDrug modified +
Person modified +
PositiveGeneExpressionRegulation modified +
ReferenceGroup modified +
Drug modified +
FunctionalStatusType modified +
Cell modified +
FailedReaction modified +
CatalystActivityReference modified +
RNADrug modified +
CandidateSet modified +
ReviewStatus modified +
FragmentReplacedModification modified +
Species modified +
TranscriptionalModification modified +
CellDevelopmentStep modified +
Taxon modified +
Polymer modified +
PositiveRegulation modified +
DatabaseObject modified +
BlackBoxEvent modified +
EvidenceType modified +
Event modified +
EntityFunctionalStatus modified +
GO_CellularComponent modified +
Publication modified +
RetractionStatus modified +
PhysicalEntityCellType modified +
NegativePrecedingEvent modified +
ModifiedResidue modified +
DatabaseIdentifier modified +
ReferenceMolecule modified +
Summation modified +
GroupModifiedResidue modified +
PsiMod modified +
NegativeRegulation modified +
Affiliation modified +
OtherEntity revised +
CellLineagePath revised +
ProteinDrug revised +
SimpleEntity revised +
InteractionEvent revised +
BlackBoxEvent revised +
ReactionlikeEvent revised +
Pathway revised +
Event revised +
Cell revised +
Complex revised +
Drug revised +
DefinedSet revised +
CandidateSet revised +
Polymerisation revised +
ChemicalDrug revised +
PhysicalEntity revised +
FailedReaction revised +
EntitySet revised +
Depolymerisation revised +
RNADrug revised +
Reaction revised +
Polymer revised +
GenomeEncodedEntity revised +
CellDevelopmentStep revised +
EntityWithAccessionedSequence revised +
CellLineagePath reviewed +
SimpleEntity reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
Pathway reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
Cell reviewed +
Complex reviewed +
Drug reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
Polymerisation reviewed +
EntitySet reviewed +
Depolymerisation reviewed +
Reaction reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
GenomeEncodedEntity reviewed +
Polymer reviewed +
CellDevelopmentStep reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
Pathway structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
ControlledVocabulary created 1
ModifiedNucleotide created 1
InterChainCrosslinkedResidue created 1
StableIdentifier created 1
EntitySet created 1
IntraChainCrosslinkedResidue created 1
NonsenseMutation created 1
GenomeEncodedEntity created 1
InstanceEdit created 1
ReferenceTherapeutic created 1
TranslationalModification created 1
CellLineagePath created 1
DeletedControlledVocabulary created 1
_UpdateTracker created 1
InteractionEvent created 1
URL created 1
CrosslinkedResidue created 1
GO_BiologicalProcess created 1
_Deleted created 1
NegativePrecedingEventReason created 1
AbstractModifiedResidue created 1
ReferenceSequence created 1
Figure created 1
ControlReference created 1
Requirement created 1
Anatomy created 1
ReactionType created 1
PhysicalEntity created 1
FragmentInsertionModification created 1
Depolymerisation created 1
NegativeGeneExpressionRegulation created 1
Compartment created 1
ReferenceEntity created 1
FunctionalStatus created 1
ReferenceRNASequence created 1
SequenceOntology created 1
DrugActionType created 1
ReferenceGeneProduct created 1
RegulationReference created 1
StableIdentifierReleaseStatus created 1
ReactionlikeEvent created 1
_DeletedInstance created 1
ExternalOntology created 1
Book created 1
PathwayDiagram created 1
Complex created 1
StableIdentifierHistory created 1
DefinedSet created 1
Polymerisation created 1
FragmentDeletionModification created 1
ChemicalDrug created 1
ReferenceDNASequence created 1
Regulation created 1
Disease created 1
Reaction created 1
_Release created 1
CellType created 1
FrontPage created 1
CatalystActivity created 1
MarkerReference created 1
FragmentModification created 1
EntityWithAccessionedSequence created 1
LiteratureReference created 1
ReplacedResidue created 1
GO_MolecularFunction created 1
GeneticallyModifiedResidue created 1
ReferenceIsoform created 1
OtherEntity created 1
Person created 1
ProteinDrug created 1
SimpleEntity created 1
ReferenceDatabase created 1
Pathway created 1
Cell created 1
FunctionalStatusType created 1
PositiveGeneExpressionRegulation created 1
ReferenceGroup created 1
Drug created 1
CandidateSet created 1
ReviewStatus created 1
FragmentReplacedModification created 1
CatalystActivityReference created 1
FailedReaction created 1
RNADrug created 1
PositiveRegulation created 1
Polymer created 1
DatabaseObject created 1
CellDevelopmentStep created 1
Taxon created 1
TranscriptionalModification created 1
Species created 1
RetractionStatus created 1
Publication created 1
NegativePrecedingEvent created 1
PhysicalEntityCellType created 1
EvidenceType created 1
BlackBoxEvent created 1
EntityFunctionalStatus created 1
GO_CellularComponent created 1
Event created 1
Summation created 1
GroupModifiedResidue created 1
ReferenceMolecule created 1
PsiMod created 1
NegativeRegulation created 1
Affiliation created 1
DatabaseIdentifier created 1
ModifiedResidue created 1
Cell edited +
Complex edited +
Drug edited +
CellLineagePath edited +
SimpleEntity edited +
ProteinDrug edited +
OtherEntity edited +
ReactionlikeEvent edited +
Pathway edited +
Event edited +
InteractionEvent edited +
BlackBoxEvent edited +
Polymer edited +
GenomeEncodedEntity edited +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
CandidateSet edited +
DefinedSet edited +
Polymerisation edited +
EntitySet edited +
Depolymerisation edited +
RNADrug edited +
Reaction edited +
ChemicalDrug edited +
PhysicalEntity edited +
FailedReaction edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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