Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
EntitySet authored 1
RNADrug authored 1
Drug authored 1
FailedReaction authored +
EntityWithAccessionedSequence authored 1
Depolymerisation authored +
Cell authored 1
Complex authored 1
Polymerisation authored +
GenomeEncodedEntity authored 1
ProteinDrug authored 1
Polymer authored 1
Pathway authored +
CellDevelopmentStep authored +
BlackBoxEvent authored +
CandidateSet authored 1
ChemicalDrug authored 1
Reaction authored +
Event authored +
PhysicalEntity authored 1
SimpleEntity authored 1
DefinedSet authored 1
CellLineagePath authored +
ReactionlikeEvent authored +
InteractionEvent authored +
OtherEntity authored 1
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
Polymer reviewed +
Pathway reviewed +
ProteinDrug reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
Complex reviewed +
Cell reviewed +
Depolymerisation reviewed +
EntityWithAccessionedSequence reviewed +
FailedReaction reviewed +
EntitySet reviewed +
RNADrug reviewed +
Drug reviewed +
InteractionEvent reviewed +
OtherEntity reviewed +
CellLineagePath reviewed +
ReactionlikeEvent reviewed +
SimpleEntity reviewed +
DefinedSet reviewed +
PhysicalEntity reviewed +
Event reviewed +
Reaction reviewed +
CandidateSet reviewed +
ChemicalDrug reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
_DeletedInstance modified +
ReferenceGroup modified +
CellLineagePath modified +
NonsenseMutation modified +
TranscriptionalModification modified +
PathwayDiagram modified +
ReferenceDatabase modified +
Taxon modified +
StableIdentifierHistory modified +
TranslationalModification modified +
FragmentInsertionModification modified +
Anatomy modified +
ReferenceGeneProduct modified +
_Deleted modified +
DatabaseIdentifier modified +
ControlledVocabulary modified +
GenomeEncodedEntity modified +
ReviewStatus modified +
NegativeRegulation modified +
NegativePrecedingEvent modified +
DrugActionType modified +
FragmentModification modified +
FunctionalStatusType modified +
FailedReaction modified +
FrontPage modified +
GO_BiologicalProcess modified +
InteractionEvent modified +
EntityFunctionalStatus modified +
OtherEntity modified +
GO_CellularComponent modified +
LiteratureReference modified +
URL modified +
ModifiedNucleotide modified +
PhysicalEntity modified +
InterChainCrosslinkedResidue modified +
GO_MolecularFunction modified +
ModifiedResidue modified +
ExternalOntology modified +
NegativeGeneExpressionRegulation modified +
ReferenceDNASequence modified +
ReferenceMolecule modified +
EvidenceType modified +
Regulation modified +
PsiMod modified +
CrosslinkedResidue modified +
ReactionlikeEvent modified +
StableIdentifier modified +
Person modified +
GroupModifiedResidue modified +
RegulationReference modified +
SimpleEntity modified +
PositiveGeneExpressionRegulation modified +
AbstractModifiedResidue modified +
Disease modified +
RetractionStatus modified +
CandidateSet modified +
InstanceEdit modified +
BlackBoxEvent modified +
Affiliation modified +
Polymer modified +
Pathway modified +
SequenceOntology modified +
ReactionType modified +
ProteinDrug modified +
Publication modified +
Polymerisation modified +
Requirement modified +
Complex modified +
MarkerReference modified +
Cell modified +
Depolymerisation modified +
EntityWithAccessionedSequence modified +
Figure modified +
ReferenceEntity modified +
Drug modified +
RNADrug modified +
StableIdentifierReleaseStatus modified +
NegativePrecedingEventReason modified +
PositiveRegulation modified +
DatabaseObject modified +
ReferenceRNASequence modified +
FragmentReplacedModification modified +
CellType modified +
DefinedSet modified +
ReferenceTherapeutic modified +
DeletedControlledVocabulary modified +
Event modified +
Reaction modified +
CatalystActivityReference modified +
Species modified +
ChemicalDrug modified +
CatalystActivity modified +
Summation modified +
CellDevelopmentStep modified +
GeneticallyModifiedResidue modified +
Book modified +
FragmentDeletionModification modified +
ReferenceIsoform modified +
IntraChainCrosslinkedResidue modified +
ControlReference modified +
FunctionalStatus modified +
ReplacedResidue modified +
_UpdateTracker modified +
Compartment modified +
ReferenceSequence modified +
_Release modified +
PhysicalEntityCellType modified +
EntitySet modified +
Depolymerisation structureModified +
Event structureModified +
Reaction structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
Pathway structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
Cell edited +
Polymerisation edited +
Complex edited +
ProteinDrug edited +
GenomeEncodedEntity edited +
Pathway edited +
Polymer edited +
EntitySet edited +
RNADrug edited +
Drug edited +
FailedReaction edited +
EntityWithAccessionedSequence edited +
Depolymerisation edited +
SimpleEntity edited +
DefinedSet edited +
CellLineagePath edited +
ReactionlikeEvent edited +
InteractionEvent edited +
OtherEntity edited +
CellDevelopmentStep edited +
BlackBoxEvent edited +
CandidateSet edited +
ChemicalDrug edited +
Reaction edited +
Event edited +
PhysicalEntity edited +
ReplacedResidue created 1
FunctionalStatus created 1
_UpdateTracker created 1
Compartment created 1
_Release created 1
ReferenceSequence created 1
EntitySet created 1
PhysicalEntityCellType created 1
Book created 1
GeneticallyModifiedResidue created 1
ReferenceIsoform created 1
FragmentDeletionModification created 1
ControlReference created 1
IntraChainCrosslinkedResidue created 1
DeletedControlledVocabulary created 1
CatalystActivityReference created 1
Species created 1
Event created 1
Reaction created 1
CatalystActivity created 1
ChemicalDrug created 1
CellDevelopmentStep created 1
Summation created 1
PositiveRegulation created 1
ReferenceRNASequence created 1
DatabaseObject created 1
ReferenceTherapeutic created 1
CellType created 1
FragmentReplacedModification created 1
DefinedSet created 1
Depolymerisation created 1
Figure created 1
EntityWithAccessionedSequence created 1
ReferenceEntity created 1
RNADrug created 1
StableIdentifierReleaseStatus created 1
NegativePrecedingEventReason created 1
Drug created 1
Polymer created 1
Pathway created 1
Affiliation created 1
ReactionType created 1
ProteinDrug created 1
SequenceOntology created 1
Complex created 1
Requirement created 1
Polymerisation created 1
Publication created 1
MarkerReference created 1
Cell created 1
PositiveGeneExpressionRegulation created 1
CandidateSet created 1
RetractionStatus created 1
Disease created 1
AbstractModifiedResidue created 1
BlackBoxEvent created 1
InstanceEdit created 1
GroupModifiedResidue created 1
StableIdentifier created 1
Person created 1
ReactionlikeEvent created 1
SimpleEntity created 1
RegulationReference created 1
CrosslinkedResidue created 1
PsiMod created 1
Regulation created 1
ReferenceMolecule created 1
EvidenceType created 1
PhysicalEntity created 1
GO_MolecularFunction created 1
InterChainCrosslinkedResidue created 1
ExternalOntology created 1
NegativeGeneExpressionRegulation created 1
ModifiedResidue created 1
ReferenceDNASequence created 1
GO_CellularComponent created 1
InteractionEvent created 1
EntityFunctionalStatus created 1
OtherEntity created 1
LiteratureReference created 1
ModifiedNucleotide created 1
URL created 1
DrugActionType created 1
FragmentModification created 1
NegativePrecedingEvent created 1
FunctionalStatusType created 1
FrontPage created 1
FailedReaction created 1
GO_BiologicalProcess created 1
ControlledVocabulary created 1
DatabaseIdentifier created 1
GenomeEncodedEntity created 1
ReviewStatus created 1
NegativeRegulation created 1
NonsenseMutation created 1
TranscriptionalModification created 1
TranslationalModification created 1
StableIdentifierHistory created 1
ReferenceDatabase created 1
Taxon created 1
PathwayDiagram created 1
Anatomy created 1
ReferenceGeneProduct created 1
FragmentInsertionModification created 1
_Deleted created 1
ReferenceGroup created 1
_DeletedInstance created 1
CellLineagePath created 1
Complex revised +
Polymerisation revised +
Cell revised +
Pathway revised +
Polymer revised +
ProteinDrug revised +
GenomeEncodedEntity revised +
FailedReaction revised +
EntitySet revised +
RNADrug revised +
Drug revised +
Depolymerisation revised +
EntityWithAccessionedSequence revised +
SimpleEntity revised +
DefinedSet revised +
OtherEntity revised +
InteractionEvent revised +
CellLineagePath revised +
ReactionlikeEvent revised +
CandidateSet revised +
ChemicalDrug revised +
CellDevelopmentStep revised +
BlackBoxEvent revised +
PhysicalEntity revised +
Reaction revised +
Event revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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