Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymerisation reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
ReactionlikeEvent reviewed +
InteractionEvent reviewed +
Cell reviewed +
Depolymerisation reviewed +
Reaction reviewed +
SimpleEntity reviewed +
CandidateSet reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
OtherEntity reviewed +
Drug reviewed +
DefinedSet reviewed +
FailedReaction reviewed +
Pathway reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
EntitySet reviewed +
EntityWithAccessionedSequence reviewed +
BlackBoxEvent reviewed +
InteractionEvent edited +
CellLineagePath edited +
ProteinDrug edited +
GenomeEncodedEntity edited +
Polymerisation edited +
Event edited +
ReactionlikeEvent edited +
Polymer edited +
ChemicalDrug edited +
RNADrug edited +
Cell edited +
Depolymerisation edited +
Reaction edited +
SimpleEntity edited +
CandidateSet edited +
FailedReaction edited +
Complex edited +
Pathway edited +
DefinedSet edited +
Drug edited +
OtherEntity edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
EntitySet edited +
BlackBoxEvent edited +
CellDevelopmentStep edited +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
_Deleted replacementInstances +
ReferenceEntity modified +
ChemicalDrug modified +
EvidenceType modified +
NegativePrecedingEvent modified +
RNADrug modified +
_Release modified +
RegulationReference modified +
Requirement modified +
PositiveGeneExpressionRegulation modified +
ReferenceDNASequence modified +
FunctionalStatusType modified +
DatabaseIdentifier modified +
InstanceEdit modified +
Event modified +
ProteinDrug modified +
GenomeEncodedEntity modified +
ReactionlikeEvent modified +
Publication modified +
URL modified +
GO_MolecularFunction modified +
GroupModifiedResidue modified +
DeletedControlledVocabulary modified +
CellDevelopmentStep modified +
NegativeGeneExpressionRegulation modified +
ControlledVocabulary modified +
CellType modified +
ControlReference modified +
ReferenceDatabase modified +
Affiliation modified +
MarkerReference modified +
NonsenseMutation modified +
FunctionalStatus modified +
Depolymerisation modified +
PhysicalEntityCellType modified +
ReactionType modified +
PsiMod modified +
Person modified +
Polymerisation modified +
Book modified +
PositiveRegulation modified +
ReferenceSequence modified +
EntityWithAccessionedSequence modified +
PathwayDiagram modified +
ReferenceMolecule modified +
TranslationalModification modified +
ReferenceRNASequence modified +
ReferenceIsoform modified +
ReviewStatus modified +
EntityFunctionalStatus modified +
Pathway modified +
Complex modified +
Regulation modified +
AbstractModifiedResidue modified +
OtherEntity modified +
_UpdateTracker modified +
DefinedSet modified +
Anatomy modified +
FrontPage modified +
DatabaseObject modified +
IntraChainCrosslinkedResidue modified +
Summation modified +
SequenceOntology modified +
GO_BiologicalProcess modified +
Reaction modified +
CandidateSet modified +
LiteratureReference modified +
ReferenceGeneProduct modified +
CrosslinkedResidue modified +
InteractionEvent modified +
Taxon modified +
InterChainCrosslinkedResidue modified +
StableIdentifierReleaseStatus modified +
Compartment modified +
ReferenceGroup modified +
CellLineagePath modified +
EntitySet modified +
_Deleted modified +
Figure modified +
StableIdentifierHistory modified +
NegativeRegulation modified +
FragmentReplacedModification modified +
Species modified +
CatalystActivityReference modified +
PhysicalEntity modified +
TranscriptionalModification modified +
_DeletedInstance modified +
ModifiedResidue modified +
Polymer modified +
GeneticallyModifiedResidue modified +
Cell modified +
SimpleEntity modified +
NegativePrecedingEventReason modified +
Disease modified +
ReferenceTherapeutic modified +
RetractionStatus modified +
FragmentInsertionModification modified +
BlackBoxEvent modified +
StableIdentifier modified +
ReplacedResidue modified +
FragmentDeletionModification modified +
DrugActionType modified +
FailedReaction modified +
FragmentModification modified +
GO_CellularComponent modified +
Drug modified +
ModifiedNucleotide modified +
ExternalOntology modified +
CatalystActivity modified +
Anatomy created 1
FrontPage created 1
DatabaseObject created 1
IntraChainCrosslinkedResidue created 1
SequenceOntology created 1
Summation created 1
Reaction created 1
GO_BiologicalProcess created 1
CandidateSet created 1
LiteratureReference created 1
CrosslinkedResidue created 1
ReferenceGeneProduct created 1
Taxon created 1
InteractionEvent created 1
InterChainCrosslinkedResidue created 1
StableIdentifierReleaseStatus created 1
Compartment created 1
CellLineagePath created 1
ReferenceGroup created 1
EntitySet created 1
_Deleted created 1
Figure created 1
StableIdentifierHistory created 1
NegativeRegulation created 1
Species created 1
FragmentReplacedModification created 1
PhysicalEntity created 1
CatalystActivityReference created 1
_DeletedInstance created 1
TranscriptionalModification created 1
ModifiedResidue created 1
Polymer created 1
GeneticallyModifiedResidue created 1
Cell created 1
SimpleEntity created 1
NegativePrecedingEventReason created 1
Disease created 1
ReferenceTherapeutic created 1
FragmentInsertionModification created 1
RetractionStatus created 1
BlackBoxEvent created 1
StableIdentifier created 1
FragmentDeletionModification created 1
ReplacedResidue created 1
DrugActionType created 1
GO_CellularComponent created 1
FragmentModification created 1
FailedReaction created 1
Drug created 1
ExternalOntology created 1
ModifiedNucleotide created 1
CatalystActivity created 1
ReferenceEntity created 1
ChemicalDrug created 1
EvidenceType created 1
RNADrug created 1
NegativePrecedingEvent created 1
_Release created 1
Requirement created 1
RegulationReference created 1
ReferenceDNASequence created 1
PositiveGeneExpressionRegulation created 1
FunctionalStatusType created 1
DatabaseIdentifier created 1
InstanceEdit created 1
Event created 1
ProteinDrug created 1
GenomeEncodedEntity created 1
ReactionlikeEvent created 1
Publication created 1
URL created 1
GO_MolecularFunction created 1
GroupModifiedResidue created 1
DeletedControlledVocabulary created 1
CellDevelopmentStep created 1
NegativeGeneExpressionRegulation created 1
ControlledVocabulary created 1
CellType created 1
ReferenceDatabase created 1
ControlReference created 1
Affiliation created 1
MarkerReference created 1
Depolymerisation created 1
NonsenseMutation created 1
FunctionalStatus created 1
PhysicalEntityCellType created 1
ReactionType created 1
PsiMod created 1
Person created 1
Polymerisation created 1
Book created 1
PositiveRegulation created 1
ReferenceSequence created 1
EntityWithAccessionedSequence created 1
PathwayDiagram created 1
TranslationalModification created 1
ReferenceMolecule created 1
ReferenceRNASequence created 1
ReferenceIsoform created 1
ReviewStatus created 1
Pathway created 1
EntityFunctionalStatus created 1
Regulation created 1
Complex created 1
AbstractModifiedResidue created 1
OtherEntity created 1
_UpdateTracker created 1
DefinedSet created 1
ChemicalDrug revised +
Polymer revised +
RNADrug revised +
Depolymerisation revised +
Reaction revised +
Cell revised +
CandidateSet revised +
SimpleEntity revised +
InteractionEvent revised +
Polymerisation revised +
Event revised +
ProteinDrug revised +
GenomeEncodedEntity revised +
CellLineagePath revised +
ReactionlikeEvent revised +
EntitySet revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
CellDevelopmentStep revised +
FailedReaction revised +
Pathway revised +
Complex revised +
OtherEntity revised +
Drug revised +
PhysicalEntity revised +
DefinedSet revised +
Pathway structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
Event structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
Reaction structureModified +
ReactionlikeEvent authored +
Event authored +
Polymerisation authored +
GenomeEncodedEntity authored 1
ProteinDrug authored 1
CellLineagePath authored +
InteractionEvent authored +
CandidateSet authored 1
SimpleEntity authored 1
Reaction authored +
Depolymerisation authored +
Cell authored 1
RNADrug authored 1
Polymer authored 1
ChemicalDrug authored 1
OtherEntity authored 1
Drug authored 1
PhysicalEntity authored 1
DefinedSet authored 1
Pathway authored +
Complex authored 1
FailedReaction authored +
CellDevelopmentStep authored +
BlackBoxEvent authored +
EntitySet authored 1
EntityWithAccessionedSequence authored 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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