Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
MarkerReference modified +
Requirement modified +
PhysicalEntityCellType modified +
StableIdentifierHistory modified +
OtherEntity modified +
StableIdentifierReleaseStatus modified +
ReplacedResidue modified +
Figure modified +
StableIdentifier modified +
_DeletedInstance modified +
NegativeRegulation modified +
ReferenceGroup modified +
RetractionStatus modified +
GO_BiologicalProcess modified +
CandidateSet modified +
Complex modified +
DrugActionType modified +
CatalystActivityReference modified +
ExternalOntology modified +
SequenceOntology modified +
GO_CellularComponent modified +
ControlledVocabulary modified +
AbstractModifiedResidue modified +
CellDevelopmentStep modified +
NegativeGeneExpressionRegulation modified +
_UpdateTracker modified +
FunctionalStatus modified +
IntraChainCrosslinkedResidue modified +
Anatomy modified +
FragmentDeletionModification modified +
DefinedSet modified +
ChemicalDrug modified +
Drug modified +
ReferenceDNASequence modified +
Depolymerisation modified +
Affiliation modified +
FrontPage modified +
BlackBoxEvent modified +
EntitySet modified +
ReferenceGeneProduct modified +
GO_MolecularFunction modified +
FragmentModification modified +
EntityWithAccessionedSequence modified +
GroupModifiedResidue modified +
Polymer modified +
NegativePrecedingEventReason modified +
Species modified +
EntityFunctionalStatus modified +
PositiveRegulation modified +
InterChainCrosslinkedResidue modified +
LiteratureReference modified +
TranslationalModification modified +
FunctionalStatusType modified +
Regulation modified +
PathwayDiagram modified +
RNADrug modified +
Disease modified +
PsiMod modified +
FragmentInsertionModification modified +
InstanceEdit modified +
Book modified +
FragmentReplacedModification modified +
EvidenceType modified +
RegulationReference modified +
_Release modified +
PhysicalEntity modified +
Reaction modified +
ReviewStatus modified +
CatalystActivity modified +
PositiveGeneExpressionRegulation modified +
ReactionType modified +
GeneticallyModifiedResidue modified +
Polymerisation modified +
ReactionlikeEvent modified +
CellType modified +
DatabaseIdentifier modified +
DatabaseObject modified +
ModifiedResidue modified +
Event modified +
DeletedControlledVocabulary modified +
Summation modified +
CrosslinkedResidue modified +
NonsenseMutation modified +
CellLineagePath modified +
_Deleted modified +
ReferenceMolecule modified +
Compartment modified +
Publication modified +
ControlReference modified +
Cell modified +
NegativePrecedingEvent modified +
URL modified +
GenomeEncodedEntity modified +
ReferenceTherapeutic modified +
ReferenceDatabase modified +
ReferenceIsoform modified +
Person modified +
ProteinDrug modified +
SimpleEntity modified +
ReferenceEntity modified +
ReferenceRNASequence modified +
FailedReaction modified +
Taxon modified +
Pathway modified +
TranscriptionalModification modified +
ReferenceSequence modified +
InteractionEvent modified +
ModifiedNucleotide modified +
PhysicalEntity edited +
ReactionlikeEvent edited +
Polymerisation edited +
Reaction edited +
Cell edited +
CellLineagePath edited +
ChemicalDrug edited +
Drug edited +
EntitySet edited +
RNADrug edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
OtherEntity edited +
BlackBoxEvent edited +
Pathway edited +
Event edited +
FailedReaction edited +
DefinedSet edited +
InteractionEvent edited +
SimpleEntity edited +
Complex edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
ProteinDrug edited +
Polymer edited +
CellDevelopmentStep edited +
CellDevelopmentStep revised +
Polymer revised +
ProteinDrug revised +
Complex revised +
CandidateSet revised +
EntityWithAccessionedSequence revised +
SimpleEntity revised +
InteractionEvent revised +
DefinedSet revised +
FailedReaction revised +
Event revised +
Pathway revised +
OtherEntity revised +
GenomeEncodedEntity revised +
BlackBoxEvent revised +
RNADrug revised +
Depolymerisation revised +
EntitySet revised +
Drug revised +
ChemicalDrug revised +
CellLineagePath revised +
Cell revised +
Reaction revised +
ReactionlikeEvent revised +
Polymerisation revised +
PhysicalEntity revised +
FailedReaction internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
EntitySet reviewed +
RNADrug reviewed +
Depolymerisation reviewed +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
Cell reviewed +
ChemicalDrug reviewed +
CellLineagePath reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
Polymerisation reviewed +
Reaction reviewed +
PhysicalEntity reviewed +
CellDevelopmentStep reviewed +
SimpleEntity reviewed +
Complex reviewed +
CandidateSet reviewed +
EntityWithAccessionedSequence reviewed +
ProteinDrug reviewed +
Polymer reviewed +
DefinedSet reviewed +
InteractionEvent reviewed +
Pathway reviewed +
Event reviewed +
FailedReaction reviewed +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
Reaction structureModified +
Event structureModified +
Pathway structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
Cell authored 1
CellLineagePath authored +
ChemicalDrug authored 1
Drug authored 1
EntitySet authored 1
RNADrug authored 1
Depolymerisation authored +
GenomeEncodedEntity authored 1
OtherEntity authored 1
BlackBoxEvent authored +
PhysicalEntity authored 1
Polymerisation authored +
ReactionlikeEvent authored +
Reaction authored +
SimpleEntity authored 1
CandidateSet authored 1
EntityWithAccessionedSequence authored 1
Complex authored 1
Polymer authored 1
ProteinDrug authored 1
CellDevelopmentStep authored +
Pathway authored +
Event authored +
FailedReaction authored +
DefinedSet authored 1
InteractionEvent authored +
PathwayDiagram created 1
Regulation created 1
FunctionalStatusType created 1
TranslationalModification created 1
LiteratureReference created 1
InterChainCrosslinkedResidue created 1
PositiveRegulation created 1
EntityFunctionalStatus created 1
Species created 1
NegativePrecedingEventReason created 1
Polymer created 1
EntityWithAccessionedSequence created 1
GroupModifiedResidue created 1
FragmentModification created 1
GO_MolecularFunction created 1
ReferenceGeneProduct created 1
EntitySet created 1
FrontPage created 1
BlackBoxEvent created 1
Depolymerisation created 1
Affiliation created 1
ReferenceDNASequence created 1
Drug created 1
ChemicalDrug created 1
FragmentDeletionModification created 1
DefinedSet created 1
Anatomy created 1
FunctionalStatus created 1
IntraChainCrosslinkedResidue created 1
_UpdateTracker created 1
NegativeGeneExpressionRegulation created 1
CellDevelopmentStep created 1
AbstractModifiedResidue created 1
ControlledVocabulary created 1
GO_CellularComponent created 1
SequenceOntology created 1
CatalystActivityReference created 1
ExternalOntology created 1
Complex created 1
CandidateSet created 1
DrugActionType created 1
GO_BiologicalProcess created 1
RetractionStatus created 1
NegativeRegulation created 1
ReferenceGroup created 1
_DeletedInstance created 1
StableIdentifier created 1
Figure created 1
ReplacedResidue created 1
OtherEntity created 1
StableIdentifierReleaseStatus created 1
StableIdentifierHistory created 1
PhysicalEntityCellType created 1
Requirement created 1
MarkerReference created 1
ModifiedNucleotide created 1
InteractionEvent created 1
ReferenceSequence created 1
TranscriptionalModification created 1
Taxon created 1
Pathway created 1
FailedReaction created 1
ReferenceRNASequence created 1
ReferenceEntity created 1
SimpleEntity created 1
ProteinDrug created 1
Person created 1
ReferenceIsoform created 1
ReferenceDatabase created 1
ReferenceTherapeutic created 1
URL created 1
GenomeEncodedEntity created 1
NegativePrecedingEvent created 1
Cell created 1
Publication created 1
ControlReference created 1
Compartment created 1
ReferenceMolecule created 1
NonsenseMutation created 1
_Deleted created 1
CellLineagePath created 1
CrosslinkedResidue created 1
Summation created 1
Event created 1
DeletedControlledVocabulary created 1
ModifiedResidue created 1
DatabaseObject created 1
CellType created 1
DatabaseIdentifier created 1
Polymerisation created 1
GeneticallyModifiedResidue created 1
ReactionlikeEvent created 1
ReviewStatus created 1
CatalystActivity created 1
Reaction created 1
ReactionType created 1
PositiveGeneExpressionRegulation created 1
PhysicalEntity created 1
_Release created 1
EvidenceType created 1
RegulationReference created 1
FragmentReplacedModification created 1
Book created 1
FragmentInsertionModification created 1
InstanceEdit created 1
PsiMod created 1
Disease created 1
RNADrug created 1
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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