Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ControlReference created 1
IntraChainCrosslinkedResidue created 1
Pathway created 1
FailedReaction created 1
AbstractModifiedResidue created 1
ReferenceGeneProduct created 1
ReactionlikeEvent created 1
CrosslinkedResidue created 1
InterChainCrosslinkedResidue created 1
OtherEntity created 1
StableIdentifier created 1
DatabaseIdentifier created 1
SimpleEntity created 1
NegativeRegulation created 1
CellDevelopmentStep created 1
ReactionType created 1
Reaction created 1
Figure created 1
NonsenseMutation created 1
StableIdentifierReleaseStatus created 1
Event created 1
ModifiedNucleotide created 1
DefinedSet created 1
NegativeGeneExpressionRegulation created 1
Polymerisation created 1
FragmentModification created 1
ReferenceRNASequence created 1
ReferenceEntity created 1
ReplacedResidue created 1
MarkerReference created 1
FragmentReplacedModification created 1
Disease created 1
ControlledVocabulary created 1
FragmentInsertionModification created 1
StableIdentifierHistory created 1
FragmentDeletionModification created 1
Compartment created 1
NegativePrecedingEventReason created 1
FunctionalStatusType created 1
ChemicalDrug created 1
Species created 1
Polymer created 1
SequenceOntology created 1
ReferenceSequence created 1
TranscriptionalModification created 1
Drug created 1
EntitySet created 1
CellType created 1
ReviewStatus created 1
ReferenceDNASequence created 1
ReferenceDatabase created 1
PhysicalEntity created 1
PsiMod created 1
DatabaseObject created 1
DrugActionType created 1
FrontPage created 1
RegulationReference created 1
Summation created 1
ProteinDrug created 1
GroupModifiedResidue created 1
TranslationalModification created 1
Requirement created 1
CellLineagePath created 1
GO_BiologicalProcess created 1
_UpdateTracker created 1
FunctionalStatus created 1
EntityWithAccessionedSequence created 1
Regulation created 1
PositiveRegulation created 1
ReferenceTherapeutic created 1
URL created 1
Complex created 1
InteractionEvent created 1
_DeletedInstance created 1
_Deleted created 1
PhysicalEntityCellType created 1
Anatomy created 1
CatalystActivityReference created 1
_Release created 1
GO_CellularComponent created 1
Depolymerisation created 1
Person created 1
EntityFunctionalStatus created 1
PathwayDiagram created 1
RNADrug created 1
ReferenceIsoform created 1
Book created 1
GenomeEncodedEntity created 1
ReferenceGroup created 1
DeletedControlledVocabulary created 1
NegativePrecedingEvent created 1
ExternalOntology created 1
LiteratureReference created 1
ModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
BlackBoxEvent created 1
ReferenceMolecule created 1
CandidateSet created 1
EvidenceType created 1
GO_MolecularFunction created 1
Cell created 1
GeneticallyModifiedResidue created 1
Publication created 1
Taxon created 1
CatalystActivity created 1
RetractionStatus created 1
InstanceEdit created 1
Affiliation created 1
_Deleted replacementInstances +
CellDevelopmentStep revised +
SimpleEntity revised +
InteractionEvent revised +
Cell revised +
Polymer revised +
ChemicalDrug revised +
OtherEntity revised +
Complex revised +
CandidateSet revised +
Event revised +
Depolymerisation revised +
Reaction revised +
EntitySet revised +
Drug revised +
ProteinDrug revised +
FailedReaction revised +
Polymerisation revised +
Pathway revised +
GenomeEncodedEntity revised +
DefinedSet revised +
RNADrug revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
ReactionlikeEvent revised +
CellLineagePath revised +
Pathway internalReviewed +
Polymerisation internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep reviewed +
SimpleEntity reviewed +
InteractionEvent reviewed +
Cell reviewed +
ChemicalDrug reviewed +
Polymer reviewed +
OtherEntity reviewed +
Complex reviewed +
CandidateSet reviewed +
Depolymerisation reviewed +
Event reviewed +
Reaction reviewed +
Drug reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
FailedReaction reviewed +
Polymerisation reviewed +
Pathway reviewed +
GenomeEncodedEntity reviewed +
DefinedSet reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
EntityWithAccessionedSequence reviewed +
BlackBoxEvent reviewed +
ReactionlikeEvent reviewed +
CellLineagePath reviewed +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
Pathway structureModified +
Depolymerisation structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
CellLineagePath structureModified +
GenomeEncodedEntity edited +
Pathway edited +
Polymerisation edited +
FailedReaction edited +
ProteinDrug edited +
PhysicalEntity edited +
RNADrug edited +
DefinedSet edited +
ReactionlikeEvent edited +
BlackBoxEvent edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
Cell edited +
InteractionEvent edited +
SimpleEntity edited +
CellDevelopmentStep edited +
CandidateSet edited +
OtherEntity edited +
Complex edited +
Polymer edited +
ChemicalDrug edited +
Event edited +
Depolymerisation edited +
EntitySet edited +
Drug edited +
Reaction edited +
Drug modified +
EntitySet modified +
TranscriptionalModification modified +
CellType modified +
ReferenceDatabase modified +
ReviewStatus modified +
ReferenceDNASequence modified +
NegativePrecedingEventReason modified +
Compartment modified +
Species modified +
ChemicalDrug modified +
Polymer modified +
FunctionalStatusType modified +
ReferenceSequence modified +
SequenceOntology modified +
FragmentReplacedModification modified +
ReplacedResidue modified +
MarkerReference modified +
Disease modified +
ControlledVocabulary modified +
FragmentInsertionModification modified +
StableIdentifierHistory modified +
FragmentDeletionModification modified +
ModifiedNucleotide modified +
DefinedSet modified +
FragmentModification modified +
Polymerisation modified +
NegativeGeneExpressionRegulation modified +
ReferenceEntity modified +
ReferenceRNASequence modified +
Figure modified +
ReactionType modified +
Reaction modified +
NonsenseMutation modified +
Event modified +
StableIdentifierReleaseStatus modified +
InterChainCrosslinkedResidue modified +
CrosslinkedResidue modified +
StableIdentifier modified +
OtherEntity modified +
SimpleEntity modified +
DatabaseIdentifier modified +
CellDevelopmentStep modified +
NegativeRegulation modified +
AbstractModifiedResidue modified +
ReactionlikeEvent modified +
ReferenceGeneProduct modified +
ControlReference modified +
IntraChainCrosslinkedResidue modified +
Pathway modified +
FailedReaction modified +
CatalystActivity modified +
RetractionStatus modified +
InstanceEdit modified +
Affiliation modified +
CandidateSet modified +
GO_MolecularFunction modified +
EvidenceType modified +
Publication modified +
Taxon modified +
Cell modified +
GeneticallyModifiedResidue modified +
ExternalOntology modified +
NegativePrecedingEvent modified +
LiteratureReference modified +
BlackBoxEvent modified +
PositiveGeneExpressionRegulation modified +
ModifiedResidue modified +
ReferenceMolecule modified +
RNADrug modified +
PathwayDiagram modified +
EntityFunctionalStatus modified +
Person modified +
Book modified +
ReferenceIsoform modified +
ReferenceGroup modified +
GenomeEncodedEntity modified +
DeletedControlledVocabulary modified +
Anatomy modified +
_Deleted modified +
PhysicalEntityCellType modified +
GO_CellularComponent modified +
_Release modified +
CatalystActivityReference modified +
Depolymerisation modified +
PositiveRegulation modified +
ReferenceTherapeutic modified +
URL modified +
Complex modified +
InteractionEvent modified +
_DeletedInstance modified +
CellLineagePath modified +
Requirement modified +
GO_BiologicalProcess modified +
FunctionalStatus modified +
_UpdateTracker modified +
Regulation modified +
EntityWithAccessionedSequence modified +
PhysicalEntity modified +
PsiMod modified +
DrugActionType modified +
DatabaseObject modified +
RegulationReference modified +
FrontPage modified +
ProteinDrug modified +
Summation modified +
GroupModifiedResidue modified +
TranslationalModification modified +
SimpleEntity authored 1
InteractionEvent authored +
Cell authored 1
CellDevelopmentStep authored +
CandidateSet authored 1
ChemicalDrug authored 1
Polymer authored 1
Complex authored 1
OtherEntity authored 1
Depolymerisation authored +
Event authored +
EntitySet authored 1
Drug authored 1
Reaction authored +
Pathway authored +
Polymerisation authored +
GenomeEncodedEntity authored 1
ProteinDrug authored 1
FailedReaction authored +
RNADrug authored 1
PhysicalEntity authored 1
DefinedSet authored 1
BlackBoxEvent authored +
ReactionlikeEvent authored +
EntityWithAccessionedSequence authored 1
CellLineagePath authored +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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