Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
ReferenceDNASequence modified +
Event modified +
ReferenceEntity modified +
StableIdentifierReleaseStatus modified +
Person modified +
TranslationalModification modified +
FrontPage modified +
DefinedSet modified +
TranscriptionalModification modified +
ReactionlikeEvent modified +
_UpdateTracker modified +
DatabaseObject modified +
ReferenceTherapeutic modified +
FragmentInsertionModification modified +
DrugActionType modified +
ReactionType modified +
FragmentModification modified +
ControlledVocabulary modified +
FunctionalStatus modified +
PositiveGeneExpressionRegulation modified +
ReplacedResidue modified +
EvidenceType modified +
SimpleEntity modified +
GenomeEncodedEntity modified +
FailedReaction modified +
URL modified +
EntityWithAccessionedSequence modified +
GO_CellularComponent modified +
Affiliation modified +
PathwayDiagram modified +
CellType modified +
NonsenseMutation modified +
DeletedControlledVocabulary modified +
Regulation modified +
Anatomy modified +
NegativePrecedingEventReason modified +
InterChainCrosslinkedResidue modified +
EntityFunctionalStatus modified +
Pathway modified +
ChemicalDrug modified +
InteractionEvent modified +
ReferenceIsoform modified +
Requirement modified +
Publication modified +
SequenceOntology modified +
ReferenceGeneProduct modified +
RegulationReference modified +
FunctionalStatusType modified +
NegativeGeneExpressionRegulation modified +
ReferenceDatabase modified +
ControlReference modified +
Book modified +
InstanceEdit modified +
StableIdentifierHistory modified +
PhysicalEntityCellType modified +
FragmentDeletionModification modified +
ModifiedNucleotide modified +
MarkerReference modified +
PositiveRegulation modified +
GO_BiologicalProcess modified +
ReviewStatus modified +
Cell modified +
OtherEntity modified +
AbstractModifiedResidue modified +
NegativePrecedingEvent modified +
FragmentReplacedModification modified +
IntraChainCrosslinkedResidue modified +
_Release modified +
NegativeRegulation modified +
Summation modified +
LiteratureReference modified +
DatabaseIdentifier modified +
CatalystActivityReference modified +
CatalystActivity modified +
GeneticallyModifiedResidue modified +
Reaction modified +
GroupModifiedResidue modified +
EntitySet modified +
Polymerisation modified +
Disease modified +
CellLineagePath modified +
PhysicalEntity modified +
RNADrug modified +
ReferenceSequence modified +
GO_MolecularFunction modified +
CrosslinkedResidue modified +
Compartment modified +
StableIdentifier modified +
Polymer modified +
PsiMod modified +
RetractionStatus modified +
ModifiedResidue modified +
Figure modified +
ProteinDrug modified +
CellDevelopmentStep modified +
ReferenceMolecule modified +
ReferenceGroup modified +
ExternalOntology modified +
Taxon modified +
BlackBoxEvent modified +
_DeletedInstance modified +
Drug modified +
Complex modified +
Species modified +
Depolymerisation modified +
CandidateSet modified +
ReferenceRNASequence modified +
_Deleted modified +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
CellLineagePath structureModified +
Event structureModified +
Polymerisation structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
Cell edited +
Event edited +
OtherEntity edited +
DefinedSet edited +
ProteinDrug edited +
InteractionEvent edited +
ReactionlikeEvent edited +
ChemicalDrug edited +
CellDevelopmentStep edited +
Pathway edited +
Drug edited +
Complex edited +
BlackBoxEvent edited +
Reaction edited +
EntitySet edited +
Polymerisation edited +
PhysicalEntity edited +
CellLineagePath edited +
SimpleEntity edited +
GenomeEncodedEntity edited +
Depolymerisation edited +
RNADrug edited +
FailedReaction edited +
EntityWithAccessionedSequence edited +
Polymer edited +
CandidateSet edited +
RNADrug revised +
FailedReaction revised +
Depolymerisation revised +
Polymer revised +
EntityWithAccessionedSequence revised +
CandidateSet revised +
Reaction revised +
Polymerisation revised +
EntitySet revised +
SimpleEntity revised +
GenomeEncodedEntity revised +
CellLineagePath revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
Pathway revised +
InteractionEvent revised +
ChemicalDrug revised +
ReactionlikeEvent revised +
BlackBoxEvent revised +
Drug revised +
Complex revised +
Event revised +
Cell revised +
OtherEntity revised +
DefinedSet revised +
ProteinDrug revised +
InteractionEvent authored +
ReactionlikeEvent authored +
ChemicalDrug authored 1
CellDevelopmentStep authored +
Pathway authored +
Drug authored 1
Complex authored 1
BlackBoxEvent authored +
Cell authored 1
Event authored +
OtherEntity authored 1
DefinedSet authored 1
ProteinDrug authored 1
Depolymerisation authored +
RNADrug authored 1
FailedReaction authored +
Polymer authored 1
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
Reaction authored +
EntitySet authored 1
Polymerisation authored +
PhysicalEntity authored 1
CellLineagePath authored +
SimpleEntity authored 1
GenomeEncodedEntity authored 1
ReferenceEntity created 1
Event created 1
ReferenceDNASequence created 1
Person created 1
TranslationalModification created 1
StableIdentifierReleaseStatus created 1
FrontPage created 1
DefinedSet created 1
TranscriptionalModification created 1
_UpdateTracker created 1
ReactionlikeEvent created 1
ReferenceTherapeutic created 1
FragmentInsertionModification created 1
DatabaseObject created 1
FunctionalStatus created 1
ControlledVocabulary created 1
ReactionType created 1
DrugActionType created 1
FragmentModification created 1
PositiveGeneExpressionRegulation created 1
EvidenceType created 1
ReplacedResidue created 1
GenomeEncodedEntity created 1
SimpleEntity created 1
URL created 1
FailedReaction created 1
EntityWithAccessionedSequence created 1
Affiliation created 1
GO_CellularComponent created 1
CellType created 1
PathwayDiagram created 1
NonsenseMutation created 1
DeletedControlledVocabulary created 1
Anatomy created 1
Regulation created 1
Pathway created 1
EntityFunctionalStatus created 1
NegativePrecedingEventReason created 1
InterChainCrosslinkedResidue created 1
InteractionEvent created 1
ChemicalDrug created 1
ReferenceIsoform created 1
Publication created 1
Requirement created 1
ReferenceGeneProduct created 1
SequenceOntology created 1
RegulationReference created 1
FunctionalStatusType created 1
NegativeGeneExpressionRegulation created 1
ReferenceDatabase created 1
ControlReference created 1
Book created 1
InstanceEdit created 1
ModifiedNucleotide created 1
StableIdentifierHistory created 1
PhysicalEntityCellType created 1
FragmentDeletionModification created 1
MarkerReference created 1
ReviewStatus created 1
GO_BiologicalProcess created 1
PositiveRegulation created 1
Cell created 1
OtherEntity created 1
AbstractModifiedResidue created 1
FragmentReplacedModification created 1
NegativePrecedingEvent created 1
NegativeRegulation created 1
_Release created 1
IntraChainCrosslinkedResidue created 1
Summation created 1
DatabaseIdentifier created 1
LiteratureReference created 1
CatalystActivityReference created 1
CatalystActivity created 1
GeneticallyModifiedResidue created 1
Polymerisation created 1
EntitySet created 1
Reaction created 1
GroupModifiedResidue created 1
PhysicalEntity created 1
CellLineagePath created 1
Disease created 1
RNADrug created 1
ReferenceSequence created 1
GO_MolecularFunction created 1
StableIdentifier created 1
Compartment created 1
CrosslinkedResidue created 1
Polymer created 1
PsiMod created 1
RetractionStatus created 1
Figure created 1
ModifiedResidue created 1
ProteinDrug created 1
CellDevelopmentStep created 1
ReferenceMolecule created 1
BlackBoxEvent created 1
Taxon created 1
ReferenceGroup created 1
ExternalOntology created 1
Complex created 1
_DeletedInstance created 1
Drug created 1
Species created 1
Depolymerisation created 1
CandidateSet created 1
_Deleted created 1
ReferenceRNASequence created 1
FailedReaction reviewed +
RNADrug reviewed +
Depolymerisation reviewed +
Polymer reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
EntitySet reviewed +
Reaction reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
PhysicalEntity reviewed +
CellLineagePath reviewed +
CellDevelopmentStep reviewed +
Pathway reviewed +
ReactionlikeEvent reviewed +
InteractionEvent reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
Complex reviewed +
Drug reviewed +
Event reviewed +
Cell reviewed +
ProteinDrug reviewed +
DefinedSet reviewed +
OtherEntity reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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