Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Depolymerisation authored +
PhysicalEntity authored 1
InteractionEvent authored +
OtherEntity authored 1
EntitySet authored 1
Drug authored 1
Event authored +
Polymerisation authored +
Polymer authored 1
Complex authored 1
RNADrug authored 1
SimpleEntity authored 1
DefinedSet authored 1
BlackBoxEvent authored +
Cell authored 1
FailedReaction authored +
CellDevelopmentStep authored +
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
GenomeEncodedEntity authored 1
ProteinDrug authored 1
Pathway authored +
ReactionlikeEvent authored +
ChemicalDrug authored 1
Reaction authored +
CellLineagePath authored +
Depolymerisation modified +
CatalystActivity modified +
NegativeGeneExpressionRegulation modified +
InteractionEvent modified +
ReferenceGeneProduct modified +
FunctionalStatusType modified +
FunctionalStatus modified +
Species modified +
LiteratureReference modified +
DrugActionType modified +
NegativeRegulation modified +
FragmentInsertionModification modified +
InterChainCrosslinkedResidue modified +
GO_BiologicalProcess modified +
NegativePrecedingEventReason modified +
GroupModifiedResidue modified +
ReferenceGroup modified +
DefinedSet modified +
FragmentDeletionModification modified +
FailedReaction modified +
EntityWithAccessionedSequence modified +
CandidateSet modified +
PathwayDiagram modified +
NegativePrecedingEvent modified +
ProteinDrug modified +
GeneticallyModifiedResidue modified +
Pathway modified +
Compartment modified +
ReferenceSequence modified +
CellLineagePath modified +
Publication modified +
DeletedControlledVocabulary modified +
_UpdateTracker modified +
PhysicalEntityCellType modified +
Book modified +
MarkerReference modified +
TranscriptionalModification modified +
PsiMod modified +
PositiveGeneExpressionRegulation modified +
_Release modified +
OtherEntity modified +
StableIdentifierHistory modified +
EvidenceType modified +
ExternalOntology modified +
Event modified +
ReferenceTherapeutic modified +
Polymerisation modified +
Complex modified +
DatabaseObject modified +
ReactionType modified +
RNADrug modified +
ControlReference modified +
StableIdentifierReleaseStatus modified +
StableIdentifier modified +
CrosslinkedResidue modified +
Summation modified +
CellDevelopmentStep modified +
ControlledVocabulary modified +
_DeletedInstance modified +
GO_MolecularFunction modified +
Taxon modified +
ReactionlikeEvent modified +
ReferenceDNASequence modified +
Reaction modified +
NonsenseMutation modified +
ReferenceDatabase modified +
_Deleted modified +
Drug modified +
RegulationReference modified +
GO_CellularComponent modified +
DatabaseIdentifier modified +
URL modified +
ReferenceEntity modified +
Polymer modified +
TranslationalModification modified +
FrontPage modified +
ReferenceIsoform modified +
Figure modified +
Cell modified +
BlackBoxEvent modified +
ReviewStatus modified +
FragmentReplacedModification modified +
ModifiedResidue modified +
Person modified +
ReferenceMolecule modified +
PhysicalEntity modified +
EntitySet modified +
InstanceEdit modified +
Disease modified +
ReplacedResidue modified +
Requirement modified +
Anatomy modified +
Affiliation modified +
ModifiedNucleotide modified +
IntraChainCrosslinkedResidue modified +
SimpleEntity modified +
ReferenceRNASequence modified +
Regulation modified +
PositiveRegulation modified +
CellType modified +
SequenceOntology modified +
EntityFunctionalStatus modified +
GenomeEncodedEntity modified +
FragmentModification modified +
CatalystActivityReference modified +
ChemicalDrug modified +
AbstractModifiedResidue modified +
RetractionStatus modified +
ChemicalDrug edited +
ReactionlikeEvent edited +
Reaction edited +
CellLineagePath edited +
ProteinDrug edited +
GenomeEncodedEntity edited +
EntityWithAccessionedSequence edited +
CandidateSet edited +
Pathway edited +
CellDevelopmentStep edited +
FailedReaction edited +
BlackBoxEvent edited +
Cell edited +
RNADrug edited +
DefinedSet edited +
SimpleEntity edited +
Complex edited +
Polymer edited +
Polymerisation edited +
Event edited +
Drug edited +
Depolymerisation edited +
OtherEntity edited +
EntitySet edited +
InteractionEvent edited +
PhysicalEntity edited +
IntraChainCrosslinkedResidue created 1
SimpleEntity created 1
ReferenceRNASequence created 1
PositiveRegulation created 1
Regulation created 1
CellType created 1
EntityFunctionalStatus created 1
SequenceOntology created 1
GenomeEncodedEntity created 1
FragmentModification created 1
CatalystActivityReference created 1
AbstractModifiedResidue created 1
ChemicalDrug created 1
RetractionStatus created 1
PhysicalEntity created 1
EntitySet created 1
InstanceEdit created 1
Disease created 1
ReplacedResidue created 1
Requirement created 1
Anatomy created 1
Affiliation created 1
ModifiedNucleotide created 1
TranslationalModification created 1
FrontPage created 1
ReferenceIsoform created 1
Figure created 1
ReviewStatus created 1
BlackBoxEvent created 1
Cell created 1
FragmentReplacedModification created 1
ModifiedResidue created 1
Person created 1
ReferenceMolecule created 1
ReferenceDatabase created 1
_Deleted created 1
Drug created 1
RegulationReference created 1
GO_CellularComponent created 1
DatabaseIdentifier created 1
ReferenceEntity created 1
URL created 1
Polymer created 1
ReactionType created 1
RNADrug created 1
ControlReference created 1
StableIdentifierReleaseStatus created 1
StableIdentifier created 1
CrosslinkedResidue created 1
Summation created 1
CellDevelopmentStep created 1
ControlledVocabulary created 1
_DeletedInstance created 1
Taxon created 1
GO_MolecularFunction created 1
ReactionlikeEvent created 1
NonsenseMutation created 1
Reaction created 1
ReferenceDNASequence created 1
DeletedControlledVocabulary created 1
_UpdateTracker created 1
Book created 1
MarkerReference created 1
PhysicalEntityCellType created 1
PsiMod created 1
TranscriptionalModification created 1
PositiveGeneExpressionRegulation created 1
OtherEntity created 1
_Release created 1
StableIdentifierHistory created 1
EvidenceType created 1
ExternalOntology created 1
Event created 1
ReferenceTherapeutic created 1
Polymerisation created 1
Complex created 1
DatabaseObject created 1
NegativePrecedingEventReason created 1
GO_BiologicalProcess created 1
GroupModifiedResidue created 1
ReferenceGroup created 1
DefinedSet created 1
FragmentDeletionModification created 1
FailedReaction created 1
CandidateSet created 1
EntityWithAccessionedSequence created 1
NegativePrecedingEvent created 1
PathwayDiagram created 1
ProteinDrug created 1
Pathway created 1
GeneticallyModifiedResidue created 1
Compartment created 1
ReferenceSequence created 1
CellLineagePath created 1
Publication created 1
Depolymerisation created 1
CatalystActivity created 1
InteractionEvent created 1
NegativeGeneExpressionRegulation created 1
ReferenceGeneProduct created 1
FunctionalStatusType created 1
FunctionalStatus created 1
Species created 1
LiteratureReference created 1
DrugActionType created 1
InterChainCrosslinkedResidue created 1
NegativeRegulation created 1
FragmentInsertionModification created 1
_Deleted replacementInstances +
Drug reviewed +
Depolymerisation reviewed +
EntitySet reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
Complex reviewed +
Polymer reviewed +
Polymerisation reviewed +
Event reviewed +
CellDevelopmentStep reviewed +
FailedReaction reviewed +
Cell reviewed +
BlackBoxEvent reviewed +
RNADrug reviewed +
DefinedSet reviewed +
SimpleEntity reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
CellLineagePath reviewed +
Reaction reviewed +
ProteinDrug reviewed +
GenomeEncodedEntity reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
Pathway reviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
Drug revised +
Depolymerisation revised +
InteractionEvent revised +
PhysicalEntity revised +
EntitySet revised +
OtherEntity revised +
Polymer revised +
Complex revised +
Event revised +
Polymerisation revised +
BlackBoxEvent revised +
Cell revised +
FailedReaction revised +
CellDevelopmentStep revised +
RNADrug revised +
SimpleEntity revised +
DefinedSet revised +
ReactionlikeEvent revised +
ChemicalDrug revised +
CellLineagePath revised +
Reaction revised +
CandidateSet revised +
EntityWithAccessionedSequence revised +
GenomeEncodedEntity revised +
ProteinDrug revised +
Pathway revised +
Event structureModified +
Pathway structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Reaction structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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