Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Reaction modified +
FragmentDeletionModification modified +
ReferenceDatabase modified +
OtherEntity modified +
EntitySet modified +
ReferenceGeneProduct modified +
ReferenceDNASequence modified +
SimpleEntity modified +
NegativeRegulation modified +
ExternalOntology modified +
_Deleted modified +
ControlledVocabulary modified +
CatalystActivity modified +
PhysicalEntity modified +
Taxon modified +
StableIdentifier modified +
_DeletedInstance modified +
Cell modified +
FailedReaction modified +
PathwayDiagram modified +
CatalystActivityReference modified +
_Release modified +
Pathway modified +
EvidenceType modified +
InteractionEvent modified +
ReferenceIsoform modified +
ReviewStatus modified +
CrosslinkedResidue modified +
ReferenceRNASequence modified +
ModifiedNucleotide modified +
RNADrug modified +
ReferenceMolecule modified +
Polymer modified +
CandidateSet modified +
InterChainCrosslinkedResidue modified +
LiteratureReference modified +
NegativePrecedingEvent modified +
Event modified +
Publication modified +
BlackBoxEvent modified +
ReferenceTherapeutic modified +
Book modified +
GO_MolecularFunction modified +
DrugActionType modified +
SequenceOntology modified +
FragmentReplacedModification modified +
Figure modified +
Anatomy modified +
Drug modified +
PsiMod modified +
FunctionalStatusType modified +
RetractionStatus modified +
Species modified +
ModifiedResidue modified +
FragmentModification modified +
Summation modified +
GroupModifiedResidue modified +
GenomeEncodedEntity modified +
MarkerReference modified +
FragmentInsertionModification modified +
IntraChainCrosslinkedResidue modified +
EntityFunctionalStatus modified +
StableIdentifierHistory modified +
Compartment modified +
CellDevelopmentStep modified +
DatabaseIdentifier modified +
PositiveGeneExpressionRegulation modified +
InstanceEdit modified +
ChemicalDrug modified +
ReplacedResidue modified +
URL modified +
GO_CellularComponent modified +
Depolymerisation modified +
GeneticallyModifiedResidue modified +
CellLineagePath modified +
_UpdateTracker modified +
PositiveRegulation modified +
Complex modified +
ReactionlikeEvent modified +
StableIdentifierReleaseStatus modified +
Requirement modified +
Disease modified +
ProteinDrug modified +
DefinedSet modified +
Regulation modified +
RegulationReference modified +
Person modified +
ControlReference modified +
FrontPage modified +
TranslationalModification modified +
ReactionType modified +
Polymerisation modified +
Affiliation modified +
PhysicalEntityCellType modified +
CellType modified +
GO_BiologicalProcess modified +
ReferenceGroup modified +
FunctionalStatus modified +
DeletedControlledVocabulary modified +
NegativePrecedingEventReason modified +
ReferenceSequence modified +
NonsenseMutation modified +
DatabaseObject modified +
NegativeGeneExpressionRegulation modified +
TranscriptionalModification modified +
EntityWithAccessionedSequence modified +
AbstractModifiedResidue modified +
ReferenceEntity modified +
Reaction edited +
ProteinDrug edited +
DefinedSet edited +
InteractionEvent edited +
GenomeEncodedEntity edited +
OtherEntity edited +
RNADrug edited +
EntitySet edited +
Polymer edited +
CandidateSet edited +
SimpleEntity edited +
Polymerisation edited +
CellDevelopmentStep edited +
Event edited +
PhysicalEntity edited +
BlackBoxEvent edited +
ChemicalDrug edited +
Cell edited +
FailedReaction edited +
Depolymerisation edited +
CellLineagePath edited +
Drug edited +
EntityWithAccessionedSequence edited +
Pathway edited +
Complex edited +
ReactionlikeEvent edited +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
Reaction structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
Pathway structureModified +
CellLineagePath reviewed +
EntityWithAccessionedSequence reviewed +
Drug reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
Pathway reviewed +
ChemicalDrug reviewed +
Cell reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
SimpleEntity reviewed +
Event reviewed +
CellDevelopmentStep reviewed +
PhysicalEntity reviewed +
BlackBoxEvent reviewed +
ProteinDrug reviewed +
Reaction reviewed +
InteractionEvent reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
OtherEntity reviewed +
Polymer reviewed +
EntitySet reviewed +
RNADrug reviewed +
CellLineagePath authored +
Pathway authored +
ReactionlikeEvent authored +
Complex authored 1
EntityWithAccessionedSequence authored 1
Drug authored 1
ChemicalDrug authored 1
FailedReaction authored +
Depolymerisation authored +
Cell authored 1
SimpleEntity authored 1
Polymerisation authored +
CandidateSet authored 1
PhysicalEntity authored 1
BlackBoxEvent authored +
CellDevelopmentStep authored +
Event authored +
InteractionEvent authored +
DefinedSet authored 1
ProteinDrug authored 1
Reaction authored +
RNADrug authored 1
EntitySet authored 1
Polymer authored 1
GenomeEncodedEntity authored 1
OtherEntity authored 1
FailedReaction revised +
Depolymerisation revised +
Cell revised +
ChemicalDrug revised +
Pathway revised +
Complex revised +
ReactionlikeEvent revised +
EntityWithAccessionedSequence revised +
Drug revised +
CellLineagePath revised +
Polymer revised +
EntitySet revised +
RNADrug revised +
GenomeEncodedEntity revised +
OtherEntity revised +
InteractionEvent revised +
DefinedSet revised +
ProteinDrug revised +
Reaction revised +
PhysicalEntity revised +
BlackBoxEvent revised +
CellDevelopmentStep revised +
Event revised +
SimpleEntity revised +
Polymerisation revised +
CandidateSet revised +
ControlReference created 1
RegulationReference created 1
Person created 1
DefinedSet created 1
Regulation created 1
Disease created 1
ProteinDrug created 1
CellType created 1
PhysicalEntityCellType created 1
Affiliation created 1
Polymerisation created 1
ReactionType created 1
FrontPage created 1
TranslationalModification created 1
DeletedControlledVocabulary created 1
NegativePrecedingEventReason created 1
ReferenceSequence created 1
FunctionalStatus created 1
GO_BiologicalProcess created 1
ReferenceGroup created 1
AbstractModifiedResidue created 1
ReferenceEntity created 1
TranscriptionalModification created 1
EntityWithAccessionedSequence created 1
NonsenseMutation created 1
DatabaseObject created 1
NegativeGeneExpressionRegulation created 1
MarkerReference created 1
FragmentInsertionModification created 1
GenomeEncodedEntity created 1
Summation created 1
FragmentModification created 1
GroupModifiedResidue created 1
Species created 1
ModifiedResidue created 1
DatabaseIdentifier created 1
Compartment created 1
CellDevelopmentStep created 1
EntityFunctionalStatus created 1
StableIdentifierHistory created 1
IntraChainCrosslinkedResidue created 1
GO_CellularComponent created 1
Depolymerisation created 1
ReplacedResidue created 1
URL created 1
PositiveGeneExpressionRegulation created 1
ChemicalDrug created 1
InstanceEdit created 1
Complex created 1
StableIdentifierReleaseStatus created 1
ReactionlikeEvent created 1
Requirement created 1
PositiveRegulation created 1
CellLineagePath created 1
_UpdateTracker created 1
GeneticallyModifiedResidue created 1
ReferenceRNASequence created 1
CrosslinkedResidue created 1
ModifiedNucleotide created 1
ReferenceMolecule created 1
Polymer created 1
RNADrug created 1
ReviewStatus created 1
InteractionEvent created 1
EvidenceType created 1
ReferenceIsoform created 1
BlackBoxEvent created 1
Publication created 1
Event created 1
LiteratureReference created 1
InterChainCrosslinkedResidue created 1
NegativePrecedingEvent created 1
CandidateSet created 1
FragmentReplacedModification created 1
DrugActionType created 1
SequenceOntology created 1
ReferenceTherapeutic created 1
Book created 1
GO_MolecularFunction created 1
RetractionStatus created 1
PsiMod created 1
FunctionalStatusType created 1
Drug created 1
Figure created 1
Anatomy created 1
EntitySet created 1
ReferenceDatabase created 1
OtherEntity created 1
FragmentDeletionModification created 1
Reaction created 1
_Deleted created 1
CatalystActivity created 1
ControlledVocabulary created 1
Taxon created 1
PhysicalEntity created 1
NegativeRegulation created 1
ExternalOntology created 1
ReferenceDNASequence created 1
SimpleEntity created 1
ReferenceGeneProduct created 1
FailedReaction created 1
_DeletedInstance created 1
Cell created 1
StableIdentifier created 1
Pathway created 1
_Release created 1
CatalystActivityReference created 1
PathwayDiagram created 1
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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