Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellLineagePath authored +
Complex authored 1
RNADrug authored 1
Event authored +
EntitySet authored 1
Polymerisation authored +
DefinedSet authored 1
SimpleEntity authored 1
Polymer authored 1
InteractionEvent authored +
Drug authored 1
ChemicalDrug authored 1
Pathway authored +
ProteinDrug authored 1
GenomeEncodedEntity authored 1
Depolymerisation authored +
PhysicalEntity authored 1
CandidateSet authored 1
EntityWithAccessionedSequence authored 1
Cell authored 1
CellDevelopmentStep authored +
OtherEntity authored 1
ReactionlikeEvent authored +
FailedReaction authored +
BlackBoxEvent authored +
Reaction authored +
Reaction edited +
BlackBoxEvent edited +
CellDevelopmentStep edited +
OtherEntity edited +
ReactionlikeEvent edited +
FailedReaction edited +
ProteinDrug edited +
GenomeEncodedEntity edited +
PhysicalEntity edited +
Depolymerisation edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
Cell edited +
SimpleEntity edited +
InteractionEvent edited +
Polymer edited +
Drug edited +
ChemicalDrug edited +
Pathway edited +
EntitySet edited +
Polymerisation edited +
DefinedSet edited +
Event edited +
CellLineagePath edited +
Complex edited +
RNADrug edited +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
PhysicalEntity reviewed +
Depolymerisation reviewed +
ProteinDrug reviewed +
GenomeEncodedEntity reviewed +
ChemicalDrug reviewed +
Drug reviewed +
Pathway reviewed +
InteractionEvent reviewed +
Polymer reviewed +
SimpleEntity reviewed +
BlackBoxEvent reviewed +
Reaction reviewed +
FailedReaction reviewed +
ReactionlikeEvent reviewed +
OtherEntity reviewed +
CellDevelopmentStep reviewed +
Event reviewed +
RNADrug reviewed +
Complex reviewed +
CellLineagePath reviewed +
Polymerisation reviewed +
DefinedSet reviewed +
EntitySet reviewed +
DatabaseObject created 1
DeletedControlledVocabulary created 1
InterChainCrosslinkedResidue created 1
NegativePrecedingEvent created 1
PhysicalEntityCellType created 1
DefinedSet created 1
Polymerisation created 1
EvidenceType created 1
Regulation created 1
_Release created 1
_Deleted created 1
GeneticallyModifiedResidue created 1
PathwayDiagram created 1
FrontPage created 1
Complex created 1
NegativeGeneExpressionRegulation created 1
PositiveRegulation created 1
IntraChainCrosslinkedResidue created 1
BlackBoxEvent created 1
FunctionalStatus created 1
Anatomy created 1
ReactionType created 1
Polymer created 1
GO_MolecularFunction created 1
Depolymerisation created 1
_UpdateTracker created 1
ModifiedResidue created 1
Publication created 1
NonsenseMutation created 1
ControlledVocabulary created 1
Affiliation created 1
Summation created 1
RegulationReference created 1
CellDevelopmentStep created 1
StableIdentifier created 1
ReviewStatus created 1
Reaction created 1
FragmentReplacedModification created 1
Person created 1
ReferenceTherapeutic created 1
CrosslinkedResidue created 1
Pathway created 1
ReferenceDNASequence created 1
GenomeEncodedEntity created 1
FragmentInsertionModification created 1
CatalystActivityReference created 1
CatalystActivity created 1
TranscriptionalModification created 1
PositiveGeneExpressionRegulation created 1
MarkerReference created 1
EntityFunctionalStatus created 1
Book created 1
RNADrug created 1
PsiMod created 1
ReferenceGroup created 1
InstanceEdit created 1
ControlReference created 1
DrugActionType created 1
Disease created 1
TranslationalModification created 1
AbstractModifiedResidue created 1
URL created 1
GO_BiologicalProcess created 1
ReferenceIsoform created 1
SimpleEntity created 1
DatabaseIdentifier created 1
InteractionEvent created 1
ChemicalDrug created 1
GO_CellularComponent created 1
ReferenceDatabase created 1
PhysicalEntity created 1
EntitySet created 1
ReplacedResidue created 1
FragmentModification created 1
ReferenceRNASequence created 1
ReferenceMolecule created 1
GroupModifiedResidue created 1
ModifiedNucleotide created 1
StableIdentifierReleaseStatus created 1
Compartment created 1
CellLineagePath created 1
Event created 1
Species created 1
_DeletedInstance created 1
Requirement created 1
NegativeRegulation created 1
Figure created 1
Taxon created 1
LiteratureReference created 1
OtherEntity created 1
FragmentDeletionModification created 1
FailedReaction created 1
ReactionlikeEvent created 1
ReferenceEntity created 1
ExternalOntology created 1
ReferenceGeneProduct created 1
CellType created 1
NegativePrecedingEventReason created 1
FunctionalStatusType created 1
StableIdentifierHistory created 1
Drug created 1
RetractionStatus created 1
ReferenceSequence created 1
ProteinDrug created 1
SequenceOntology created 1
CandidateSet created 1
EntityWithAccessionedSequence created 1
Cell created 1
Reaction structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
Event structureModified +
Pathway structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
_Deleted replacementInstances +
AbstractModifiedResidue modified +
Disease modified +
TranslationalModification modified +
DrugActionType modified +
ControlReference modified +
InstanceEdit modified +
ReferenceDatabase modified +
PhysicalEntity modified +
GO_CellularComponent modified +
ChemicalDrug modified +
InteractionEvent modified +
DatabaseIdentifier modified +
SimpleEntity modified +
ReferenceIsoform modified +
GO_BiologicalProcess modified +
URL modified +
PositiveGeneExpressionRegulation modified +
TranscriptionalModification modified +
CatalystActivity modified +
CatalystActivityReference modified +
FragmentInsertionModification modified +
ReferenceGroup modified +
PsiMod modified +
Book modified +
RNADrug modified +
EntityFunctionalStatus modified +
MarkerReference modified +
FunctionalStatusType modified +
CellType modified +
NegativePrecedingEventReason modified +
ReferenceGeneProduct modified +
ExternalOntology modified +
ReferenceEntity modified +
ReactionlikeEvent modified +
FragmentDeletionModification modified +
FailedReaction modified +
Figure modified +
Taxon modified +
LiteratureReference modified +
OtherEntity modified +
NegativeRegulation modified +
Cell modified +
EntityWithAccessionedSequence modified +
CandidateSet modified +
RetractionStatus modified +
SequenceOntology modified +
ProteinDrug modified +
ReferenceSequence modified +
Drug modified +
StableIdentifierHistory modified +
GroupModifiedResidue modified +
ReferenceMolecule modified +
ReferenceRNASequence modified +
FragmentModification modified +
ReplacedResidue modified +
EntitySet modified +
Species modified +
Requirement modified +
_DeletedInstance modified +
Event modified +
CellLineagePath modified +
Compartment modified +
StableIdentifierReleaseStatus modified +
ModifiedNucleotide modified +
Anatomy modified +
FunctionalStatus modified +
BlackBoxEvent modified +
IntraChainCrosslinkedResidue modified +
Depolymerisation modified +
_UpdateTracker modified +
ModifiedResidue modified +
GO_MolecularFunction modified +
Polymer modified +
ReactionType modified +
GeneticallyModifiedResidue modified +
_Release modified +
_Deleted modified +
Regulation modified +
EvidenceType modified +
Polymerisation modified +
DefinedSet modified +
PhysicalEntityCellType modified +
NegativePrecedingEvent modified +
InterChainCrosslinkedResidue modified +
DeletedControlledVocabulary modified +
DatabaseObject modified +
PositiveRegulation modified +
NegativeGeneExpressionRegulation modified +
Complex modified +
FrontPage modified +
PathwayDiagram modified +
ReferenceTherapeutic modified +
Person modified +
Reaction modified +
FragmentReplacedModification modified +
ReviewStatus modified +
StableIdentifier modified +
CellDevelopmentStep modified +
GenomeEncodedEntity modified +
Pathway modified +
ReferenceDNASequence modified +
CrosslinkedResidue modified +
ControlledVocabulary modified +
NonsenseMutation modified +
Publication modified +
RegulationReference modified +
Summation modified +
Affiliation modified +
Polymerisation revised +
DefinedSet revised +
EntitySet revised +
Complex revised +
CellLineagePath revised +
RNADrug revised +
Event revised +
FailedReaction revised +
ReactionlikeEvent revised +
CellDevelopmentStep revised +
OtherEntity revised +
BlackBoxEvent revised +
Reaction revised +
Polymer revised +
InteractionEvent revised +
Pathway revised +
ChemicalDrug revised +
Drug revised +
SimpleEntity revised +
CandidateSet revised +
EntityWithAccessionedSequence revised +
Cell revised +
GenomeEncodedEntity revised +
ProteinDrug revised +
PhysicalEntity revised +
Depolymerisation revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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