Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReferenceGroup modified +
_UpdateTracker modified +
EntityFunctionalStatus modified +
StableIdentifierHistory modified +
Anatomy modified +
SequenceOntology modified +
FragmentDeletionModification modified +
ReferenceDatabase modified +
CrosslinkedResidue modified +
ReferenceRNASequence modified +
RetractionStatus modified +
GO_BiologicalProcess modified +
NegativeRegulation modified +
BlackBoxEvent modified +
AbstractModifiedResidue modified +
FragmentInsertionModification modified +
FragmentModification modified +
Person modified +
Requirement modified +
Affiliation modified +
FunctionalStatusType modified +
PhysicalEntityCellType modified +
Polymerisation modified +
TranslationalModification modified +
Depolymerisation modified +
PositiveRegulation modified +
Species modified +
Regulation modified +
ReplacedResidue modified +
DatabaseObject modified +
ReferenceIsoform modified +
StableIdentifier modified +
Cell modified +
PhysicalEntity modified +
ProteinDrug modified +
Complex modified +
ChemicalDrug modified +
CellLineagePath modified +
ModifiedNucleotide modified +
Compartment modified +
ReferenceSequence modified +
PathwayDiagram modified +
GroupModifiedResidue modified +
TranscriptionalModification modified +
ReferenceEntity modified +
Book modified +
EntityWithAccessionedSequence modified +
Disease modified +
Drug modified +
FunctionalStatus modified +
DrugActionType modified +
ReactionlikeEvent modified +
_DeletedInstance modified +
NegativePrecedingEventReason modified +
GO_CellularComponent modified +
OtherEntity modified +
NegativePrecedingEvent modified +
NonsenseMutation modified +
CatalystActivity modified +
InterChainCrosslinkedResidue modified +
Taxon modified +
InteractionEvent modified +
GeneticallyModifiedResidue modified +
StableIdentifierReleaseStatus modified +
MarkerReference modified +
DatabaseIdentifier modified +
Polymer modified +
URL modified +
ReferenceDNASequence modified +
DeletedControlledVocabulary modified +
DefinedSet modified +
RegulationReference modified +
ExternalOntology modified +
InstanceEdit modified +
SimpleEntity modified +
Event modified +
Reaction modified +
CandidateSet modified +
ReferenceTherapeutic modified +
EvidenceType modified +
_Deleted modified +
Summation modified +
EntitySet modified +
RNADrug modified +
Publication modified +
CellType modified +
GO_MolecularFunction modified +
GenomeEncodedEntity modified +
ReactionType modified +
ControlReference modified +
FailedReaction modified +
CatalystActivityReference modified +
NegativeGeneExpressionRegulation modified +
ReviewStatus modified +
ReferenceGeneProduct modified +
ModifiedResidue modified +
FrontPage modified +
ControlledVocabulary modified +
PsiMod modified +
CellDevelopmentStep modified +
IntraChainCrosslinkedResidue modified +
Figure modified +
Pathway modified +
PositiveGeneExpressionRegulation modified +
_Release modified +
ReferenceMolecule modified +
LiteratureReference modified +
FragmentReplacedModification modified +
_Deleted replacementInstances +
RNADrug revised +
Cell revised +
EntitySet revised +
GenomeEncodedEntity revised +
FailedReaction revised +
ProteinDrug revised +
PhysicalEntity revised +
Complex revised +
Polymer revised +
ChemicalDrug revised +
CellLineagePath revised +
Drug revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
BlackBoxEvent revised +
DefinedSet revised +
EntityWithAccessionedSequence revised +
CandidateSet revised +
Depolymerisation revised +
OtherEntity revised +
InteractionEvent revised +
SimpleEntity revised +
Pathway revised +
Event revised +
Reaction revised +
Polymerisation revised +
BlackBoxEvent edited +
DefinedSet edited +
EntityWithAccessionedSequence edited +
Drug edited +
ReactionlikeEvent edited +
CellDevelopmentStep edited +
SimpleEntity edited +
Pathway edited +
Event edited +
Reaction edited +
Polymerisation edited +
CandidateSet edited +
OtherEntity edited +
Depolymerisation edited +
InteractionEvent edited +
EntitySet edited +
RNADrug edited +
Cell edited +
ProteinDrug edited +
PhysicalEntity edited +
Polymer edited +
Complex edited +
ChemicalDrug edited +
CellLineagePath edited +
GenomeEncodedEntity edited +
FailedReaction edited +
InteractionEvent structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
Reaction structureModified +
Event structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
GenomeEncodedEntity reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
PhysicalEntity reviewed +
Complex reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
CellLineagePath reviewed +
RNADrug reviewed +
Cell reviewed +
EntitySet reviewed +
CandidateSet reviewed +
Depolymerisation reviewed +
OtherEntity reviewed +
InteractionEvent reviewed +
SimpleEntity reviewed +
Pathway reviewed +
Polymerisation reviewed +
Event reviewed +
Reaction reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
DefinedSet reviewed +
EntityWithAccessionedSequence reviewed +
InstanceEdit created 1
ExternalOntology created 1
DefinedSet created 1
RegulationReference created 1
DeletedControlledVocabulary created 1
_Deleted created 1
CandidateSet created 1
ReferenceTherapeutic created 1
EvidenceType created 1
Reaction created 1
Event created 1
SimpleEntity created 1
MarkerReference created 1
StableIdentifierReleaseStatus created 1
GeneticallyModifiedResidue created 1
ReferenceDNASequence created 1
URL created 1
Polymer created 1
DatabaseIdentifier created 1
CellDevelopmentStep created 1
PsiMod created 1
FrontPage created 1
ModifiedResidue created 1
ControlledVocabulary created 1
ReferenceGeneProduct created 1
ReviewStatus created 1
FragmentReplacedModification created 1
LiteratureReference created 1
ReferenceMolecule created 1
_Release created 1
PositiveGeneExpressionRegulation created 1
Pathway created 1
IntraChainCrosslinkedResidue created 1
Figure created 1
Publication created 1
RNADrug created 1
EntitySet created 1
Summation created 1
CatalystActivityReference created 1
ControlReference created 1
NegativeGeneExpressionRegulation created 1
FailedReaction created 1
ReactionType created 1
GenomeEncodedEntity created 1
GO_MolecularFunction created 1
CellType created 1
FunctionalStatusType created 1
Affiliation created 1
Requirement created 1
FragmentModification created 1
Person created 1
FragmentInsertionModification created 1
BlackBoxEvent created 1
AbstractModifiedResidue created 1
NegativeRegulation created 1
Regulation created 1
Species created 1
PositiveRegulation created 1
Depolymerisation created 1
TranslationalModification created 1
Polymerisation created 1
PhysicalEntityCellType created 1
SequenceOntology created 1
Anatomy created 1
StableIdentifierHistory created 1
EntityFunctionalStatus created 1
_UpdateTracker created 1
ReferenceGroup created 1
GO_BiologicalProcess created 1
RetractionStatus created 1
ReferenceRNASequence created 1
CrosslinkedResidue created 1
ReferenceDatabase created 1
FragmentDeletionModification created 1
ReactionlikeEvent created 1
_DeletedInstance created 1
DrugActionType created 1
Drug created 1
FunctionalStatus created 1
Disease created 1
Book created 1
ReferenceEntity created 1
EntityWithAccessionedSequence created 1
TranscriptionalModification created 1
GroupModifiedResidue created 1
PathwayDiagram created 1
Taxon created 1
InterChainCrosslinkedResidue created 1
InteractionEvent created 1
CatalystActivity created 1
NonsenseMutation created 1
NegativePrecedingEvent created 1
GO_CellularComponent created 1
OtherEntity created 1
NegativePrecedingEventReason created 1
Cell created 1
StableIdentifier created 1
DatabaseObject created 1
ReferenceIsoform created 1
ReplacedResidue created 1
ReferenceSequence created 1
Compartment created 1
ModifiedNucleotide created 1
CellLineagePath created 1
ChemicalDrug created 1
Complex created 1
ProteinDrug created 1
PhysicalEntity created 1
RNADrug authored 1
Cell authored 1
EntitySet authored 1
GenomeEncodedEntity authored 1
FailedReaction authored +
PhysicalEntity authored 1
ProteinDrug authored 1
Complex authored 1
Polymer authored 1
ChemicalDrug authored 1
CellLineagePath authored +
Drug authored 1
ReactionlikeEvent authored +
CellDevelopmentStep authored +
BlackBoxEvent authored +
DefinedSet authored 1
EntityWithAccessionedSequence authored 1
Depolymerisation authored +
CandidateSet authored 1
OtherEntity authored 1
InteractionEvent authored +
SimpleEntity authored 1
Pathway authored +
Event authored +
Reaction authored +
Polymerisation authored +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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