Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent authored +
GenomeEncodedEntity authored 1
EntitySet authored 1
DefinedSet authored 1
Complex authored 1
Event authored +
OtherEntity authored 1
Drug authored 1
EntityWithAccessionedSequence authored 1
FailedReaction authored +
CandidateSet authored 1
Pathway authored +
InteractionEvent authored +
CellDevelopmentStep authored +
PhysicalEntity authored 1
Reaction authored +
ChemicalDrug authored 1
RNADrug authored 1
Polymerisation authored +
SimpleEntity authored 1
CellLineagePath authored +
ProteinDrug authored 1
Cell authored 1
Polymer authored 1
Depolymerisation authored +
BlackBoxEvent authored +
CellLineagePath edited +
SimpleEntity edited +
Polymerisation edited +
PhysicalEntity edited +
CellDevelopmentStep edited +
RNADrug edited +
Reaction edited +
ChemicalDrug edited +
Depolymerisation edited +
BlackBoxEvent edited +
Cell edited +
ProteinDrug edited +
Polymer edited +
Complex edited +
DefinedSet edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
EntitySet edited +
FailedReaction edited +
CandidateSet edited +
Drug edited +
OtherEntity edited +
EntityWithAccessionedSequence edited +
Event edited +
InteractionEvent edited +
Pathway edited +
Event structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
_Deleted replacementInstances +
_Deleted created 1
Polymer created 1
Person created 1
InstanceEdit created 1
Cell created 1
BlackBoxEvent created 1
InterChainCrosslinkedResidue created 1
ReferenceRNASequence created 1
DrugActionType created 1
Depolymerisation created 1
ChemicalDrug created 1
PhysicalEntity created 1
StableIdentifierHistory created 1
CellDevelopmentStep created 1
Affiliation created 1
Disease created 1
ReferenceEntity created 1
GO_MolecularFunction created 1
Polymerisation created 1
PhysicalEntityCellType created 1
ControlReference created 1
StableIdentifierReleaseStatus created 1
Anatomy created 1
FragmentReplacedModification created 1
DatabaseIdentifier created 1
FragmentInsertionModification created 1
InteractionEvent created 1
CandidateSet created 1
FailedReaction created 1
Regulation created 1
PsiMod created 1
RetractionStatus created 1
FunctionalStatusType created 1
Requirement created 1
Figure created 1
EntityFunctionalStatus created 1
_Release created 1
ReferenceIsoform created 1
NegativeGeneExpressionRegulation created 1
ControlledVocabulary created 1
ModifiedResidue created 1
ProteinDrug created 1
Summation created 1
NegativeRegulation created 1
NegativePrecedingEvent created 1
ReferenceGeneProduct created 1
_DeletedInstance created 1
ReferenceSequence created 1
FrontPage created 1
ReferenceDatabase created 1
FragmentDeletionModification created 1
URL created 1
RegulationReference created 1
ReviewStatus created 1
EntityWithAccessionedSequence created 1
ReactionlikeEvent created 1
DefinedSet created 1
ReactionType created 1
LiteratureReference created 1
CatalystActivity created 1
NonsenseMutation created 1
GeneticallyModifiedResidue created 1
_UpdateTracker created 1
MarkerReference created 1
NegativePrecedingEventReason created 1
Species created 1
RNADrug created 1
PositiveRegulation created 1
ModifiedNucleotide created 1
ExternalOntology created 1
ReferenceGroup created 1
ReferenceTherapeutic created 1
FragmentModification created 1
PathwayDiagram created 1
Event created 1
GroupModifiedResidue created 1
EntitySet created 1
GenomeEncodedEntity created 1
ReferenceDNASequence created 1
Publication created 1
GO_CellularComponent created 1
StableIdentifier created 1
CrosslinkedResidue created 1
ReferenceMolecule created 1
DeletedControlledVocabulary created 1
EvidenceType created 1
CellType created 1
Reaction created 1
TranscriptionalModification created 1
Book created 1
SimpleEntity created 1
DatabaseObject created 1
CellLineagePath created 1
FunctionalStatus created 1
TranslationalModification created 1
Compartment created 1
AbstractModifiedResidue created 1
CatalystActivityReference created 1
SequenceOntology created 1
Pathway created 1
Taxon created 1
OtherEntity created 1
Drug created 1
PositiveGeneExpressionRegulation created 1
ReplacedResidue created 1
Complex created 1
IntraChainCrosslinkedResidue created 1
GO_BiologicalProcess created 1
Cell revised +
ProteinDrug revised +
Polymer revised +
Depolymerisation revised +
BlackBoxEvent revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
RNADrug revised +
ChemicalDrug revised +
Reaction revised +
SimpleEntity revised +
CellLineagePath revised +
Polymerisation revised +
CandidateSet revised +
FailedReaction revised +
Drug revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
Event revised +
InteractionEvent revised +
Pathway revised +
GenomeEncodedEntity revised +
ReactionlikeEvent revised +
EntitySet revised +
Complex revised +
DefinedSet revised +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
Polymer reviewed +
ProteinDrug reviewed +
Cell reviewed +
Polymerisation reviewed +
SimpleEntity reviewed +
CellLineagePath reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
CellDevelopmentStep reviewed +
Pathway reviewed +
InteractionEvent reviewed +
OtherEntity reviewed +
Drug reviewed +
EntityWithAccessionedSequence reviewed +
Event reviewed +
CandidateSet reviewed +
FailedReaction reviewed +
Complex reviewed +
DefinedSet reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
ChemicalDrug modified +
CellDevelopmentStep modified +
PhysicalEntity modified +
StableIdentifierHistory modified +
Affiliation modified +
Disease modified +
ReferenceEntity modified +
Polymerisation modified +
GO_MolecularFunction modified +
PhysicalEntityCellType modified +
_Deleted modified +
Person modified +
Polymer modified +
Cell modified +
InstanceEdit modified +
InterChainCrosslinkedResidue modified +
BlackBoxEvent modified +
Depolymerisation modified +
DrugActionType modified +
ReferenceRNASequence modified +
RetractionStatus modified +
FunctionalStatusType modified +
Requirement modified +
Figure modified +
EntityFunctionalStatus modified +
_Release modified +
ReferenceIsoform modified +
NegativeGeneExpressionRegulation modified +
ControlledVocabulary modified +
ModifiedResidue modified +
ControlReference modified +
Anatomy modified +
StableIdentifierReleaseStatus modified +
FragmentReplacedModification modified +
FragmentInsertionModification modified +
DatabaseIdentifier modified +
InteractionEvent modified +
CandidateSet modified +
FailedReaction modified +
Regulation modified +
PsiMod modified +
_DeletedInstance modified +
ReferenceGeneProduct modified +
ReferenceSequence modified +
FrontPage modified +
ReferenceDatabase modified +
FragmentDeletionModification modified +
ProteinDrug modified +
NegativeRegulation modified +
Summation modified +
NegativePrecedingEvent modified +
ReactionlikeEvent modified +
DefinedSet modified +
ReactionType modified +
LiteratureReference modified +
CatalystActivity modified +
URL modified +
RegulationReference modified +
ReviewStatus modified +
EntityWithAccessionedSequence modified +
RNADrug modified +
PositiveRegulation modified +
ModifiedNucleotide modified +
ExternalOntology modified +
NonsenseMutation modified +
GeneticallyModifiedResidue modified +
_UpdateTracker modified +
NegativePrecedingEventReason modified +
MarkerReference modified +
Species modified +
GroupModifiedResidue modified +
EntitySet modified +
GenomeEncodedEntity modified +
ReferenceDNASequence modified +
Publication modified +
GO_CellularComponent modified +
ReferenceGroup modified +
ReferenceTherapeutic modified +
FragmentModification modified +
PathwayDiagram modified +
Event modified +
CellType modified +
Reaction modified +
Book modified +
CellLineagePath modified +
SimpleEntity modified +
DatabaseObject modified +
TranscriptionalModification modified +
TranslationalModification modified +
FunctionalStatus modified +
Compartment modified +
AbstractModifiedResidue modified +
StableIdentifier modified +
CrosslinkedResidue modified +
ReferenceMolecule modified +
DeletedControlledVocabulary modified +
EvidenceType modified +
ReplacedResidue modified +
IntraChainCrosslinkedResidue modified +
Complex modified +
GO_BiologicalProcess modified +
CatalystActivityReference modified +
SequenceOntology modified +
Pathway modified +
Taxon modified +
OtherEntity modified +
PositiveGeneExpressionRegulation modified +
Drug modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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