Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellDevelopmentStep structureModified +
Event structureModified +
CellLineagePath structureModified +
Reaction structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
Cell revised +
OtherEntity revised +
BlackBoxEvent revised +
Pathway revised +
Polymer revised +
CandidateSet revised +
CellDevelopmentStep revised +
CellLineagePath revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
Reaction revised +
FailedReaction revised +
Depolymerisation revised +
DefinedSet revised +
Polymerisation revised +
ReactionlikeEvent revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
ChemicalDrug revised +
Event revised +
PhysicalEntity revised +
Complex revised +
ProteinDrug revised +
Drug revised +
EntitySet revised +
RNADrug revised +
ReactionlikeEvent modified +
DatabaseObject modified +
FragmentReplacedModification modified +
Taxon modified +
Depolymerisation modified +
DefinedSet modified +
TranscriptionalModification modified +
Compartment modified +
ReferenceTherapeutic modified +
ReferenceGroup modified +
CatalystActivityReference modified +
ReferenceRNASequence modified +
EvidenceType modified +
MarkerReference modified +
StableIdentifierReleaseStatus modified +
GroupModifiedResidue modified +
Figure modified +
PhysicalEntityCellType modified +
EntityFunctionalStatus modified +
Pathway modified +
PathwayDiagram modified +
Person modified +
NonsenseMutation modified +
ModifiedNucleotide modified +
GenomeEncodedEntity modified +
CellLineagePath modified +
IntraChainCrosslinkedResidue modified +
DatabaseIdentifier modified +
Polymerisation modified +
GO_CellularComponent modified +
ExternalOntology modified +
DeletedControlledVocabulary modified +
CatalystActivity modified +
CellType modified +
DrugActionType modified +
ReactionType modified +
Complex modified +
RegulationReference modified +
ReferenceDNASequence modified +
CandidateSet modified +
ReferenceDatabase modified +
GO_MolecularFunction modified +
OtherEntity modified +
NegativeRegulation modified +
Cell modified +
SequenceOntology modified +
PositiveGeneExpressionRegulation modified +
ControlReference modified +
ModifiedResidue modified +
SimpleEntity modified +
CellDevelopmentStep modified +
Publication modified +
InteractionEvent modified +
NegativeGeneExpressionRegulation modified +
ReferenceEntity modified +
CrosslinkedResidue modified +
PsiMod modified +
StableIdentifierHistory modified +
FragmentModification modified +
Regulation modified +
_Deleted modified +
FailedReaction modified +
_DeletedInstance modified +
RNADrug modified +
ControlledVocabulary modified +
ReferenceGeneProduct modified +
Event modified +
EntityWithAccessionedSequence modified +
PhysicalEntity modified +
ChemicalDrug modified +
_Release modified +
NegativePrecedingEventReason modified +
Affiliation modified +
GO_BiologicalProcess modified +
BlackBoxEvent modified +
URL modified +
InstanceEdit modified +
StableIdentifier modified +
Species modified +
Disease modified +
_UpdateTracker modified +
ReferenceMolecule modified +
ReferenceIsoform modified +
RetractionStatus modified +
Reaction modified +
PositiveRegulation modified +
Summation modified +
EntitySet modified +
Drug modified +
ReferenceSequence modified +
ProteinDrug modified +
FragmentInsertionModification modified +
LiteratureReference modified +
FunctionalStatusType modified +
AbstractModifiedResidue modified +
ReplacedResidue modified +
Book modified +
ReviewStatus modified +
TranslationalModification modified +
Polymer modified +
InterChainCrosslinkedResidue modified +
Requirement modified +
FrontPage modified +
Anatomy modified +
FragmentDeletionModification modified +
FunctionalStatus modified +
NegativePrecedingEvent modified +
GeneticallyModifiedResidue modified +
Polymer authored 1
CandidateSet authored 1
Cell authored 1
OtherEntity authored 1
BlackBoxEvent authored +
Pathway authored +
SimpleEntity authored 1
CellDevelopmentStep authored +
GenomeEncodedEntity authored 1
CellLineagePath authored +
ReactionlikeEvent authored +
Polymerisation authored +
InteractionEvent authored +
FailedReaction authored +
Reaction authored +
DefinedSet authored 1
Depolymerisation authored +
Drug authored 1
EntitySet authored 1
RNADrug authored 1
ChemicalDrug authored 1
Event authored +
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
ProteinDrug authored 1
Complex authored 1
Pathway edited +
OtherEntity edited +
BlackBoxEvent edited +
Cell edited +
CandidateSet edited +
Polymer edited +
GenomeEncodedEntity edited +
CellLineagePath edited +
CellDevelopmentStep edited +
SimpleEntity edited +
DefinedSet edited +
Depolymerisation edited +
Reaction edited +
FailedReaction edited +
InteractionEvent edited +
ReactionlikeEvent edited +
Polymerisation edited +
Complex edited +
ProteinDrug edited +
Event edited +
PhysicalEntity edited +
ChemicalDrug edited +
EntityWithAccessionedSequence edited +
RNADrug edited +
Drug edited +
EntitySet edited +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
GO_CellularComponent created 1
Polymerisation created 1
DatabaseIdentifier created 1
DeletedControlledVocabulary created 1
ExternalOntology created 1
CellType created 1
CatalystActivity created 1
ReferenceDNASequence created 1
RegulationReference created 1
DrugActionType created 1
ReactionType created 1
Complex created 1
GO_MolecularFunction created 1
CandidateSet created 1
ReferenceDatabase created 1
Cell created 1
NegativeRegulation created 1
OtherEntity created 1
SimpleEntity created 1
ControlReference created 1
ModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
SequenceOntology created 1
Publication created 1
CellDevelopmentStep created 1
FragmentReplacedModification created 1
DatabaseObject created 1
ReactionlikeEvent created 1
TranscriptionalModification created 1
Depolymerisation created 1
DefinedSet created 1
Taxon created 1
Compartment created 1
ReferenceTherapeutic created 1
ReferenceGroup created 1
GroupModifiedResidue created 1
StableIdentifierReleaseStatus created 1
MarkerReference created 1
CatalystActivityReference created 1
EvidenceType created 1
ReferenceRNASequence created 1
PhysicalEntityCellType created 1
Figure created 1
Person created 1
EntityFunctionalStatus created 1
Pathway created 1
PathwayDiagram created 1
ModifiedNucleotide created 1
NonsenseMutation created 1
IntraChainCrosslinkedResidue created 1
GenomeEncodedEntity created 1
CellLineagePath created 1
ReferenceIsoform created 1
Reaction created 1
RetractionStatus created 1
ReferenceSequence created 1
Drug created 1
EntitySet created 1
Summation created 1
PositiveRegulation created 1
ReplacedResidue created 1
AbstractModifiedResidue created 1
LiteratureReference created 1
FunctionalStatusType created 1
FragmentInsertionModification created 1
ProteinDrug created 1
Polymer created 1
TranslationalModification created 1
ReviewStatus created 1
Book created 1
Anatomy created 1
FrontPage created 1
Requirement created 1
InterChainCrosslinkedResidue created 1
FunctionalStatus created 1
FragmentDeletionModification created 1
GeneticallyModifiedResidue created 1
NegativePrecedingEvent created 1
PsiMod created 1
StableIdentifierHistory created 1
FragmentModification created 1
CrosslinkedResidue created 1
ReferenceEntity created 1
NegativeGeneExpressionRegulation created 1
InteractionEvent created 1
_DeletedInstance created 1
FailedReaction created 1
_Deleted created 1
Regulation created 1
ReferenceGeneProduct created 1
RNADrug created 1
ControlledVocabulary created 1
PhysicalEntity created 1
EntityWithAccessionedSequence created 1
Event created 1
ChemicalDrug created 1
Affiliation created 1
NegativePrecedingEventReason created 1
_Release created 1
BlackBoxEvent created 1
GO_BiologicalProcess created 1
StableIdentifier created 1
InstanceEdit created 1
URL created 1
ReferenceMolecule created 1
_UpdateTracker created 1
Species created 1
Disease created 1
EntitySet reviewed +
Drug reviewed +
RNADrug reviewed +
ProteinDrug reviewed +
Complex reviewed +
Event reviewed +
ChemicalDrug reviewed +
PhysicalEntity reviewed +
EntityWithAccessionedSequence reviewed +
InteractionEvent reviewed +
Polymerisation reviewed +
ReactionlikeEvent reviewed +
Reaction reviewed +
FailedReaction reviewed +
Depolymerisation reviewed +
DefinedSet reviewed +
SimpleEntity reviewed +
CellDevelopmentStep reviewed +
GenomeEncodedEntity reviewed +
CellLineagePath reviewed +
Polymer reviewed +
CandidateSet reviewed +
OtherEntity reviewed +
BlackBoxEvent reviewed +
Cell reviewed +
Pathway reviewed +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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