Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
MarkerReference created 1
ModifiedResidue created 1
Taxon created 1
GroupModifiedResidue created 1
Requirement created 1
PathwayDiagram created 1
Publication created 1
InstanceEdit created 1
_DeletedInstance created 1
Regulation created 1
ReferenceEntity created 1
PositiveGeneExpressionRegulation created 1
PhysicalEntityCellType created 1
Anatomy created 1
ReactionType created 1
Disease created 1
ReferenceMolecule created 1
ReferenceGroup created 1
Pathway created 1
SimpleEntity created 1
Depolymerisation created 1
EntityWithAccessionedSequence created 1
GeneticallyModifiedResidue created 1
ReferenceDatabase created 1
DefinedSet created 1
Complex created 1
FunctionalStatusType created 1
DatabaseIdentifier created 1
RegulationReference created 1
Book created 1
Figure created 1
ReactionlikeEvent created 1
BlackBoxEvent created 1
InterChainCrosslinkedResidue created 1
ChemicalDrug created 1
Person created 1
Compartment created 1
NegativePrecedingEventReason created 1
OtherEntity created 1
Cell created 1
ControlledVocabulary created 1
URL created 1
StableIdentifier created 1
NegativeRegulation created 1
ExternalOntology created 1
_Deleted created 1
CellDevelopmentStep created 1
GO_CellularComponent created 1
ReferenceTherapeutic created 1
SequenceOntology created 1
EntitySet created 1
CellLineagePath created 1
StableIdentifierHistory created 1
GenomeEncodedEntity created 1
LiteratureReference created 1
CellType created 1
FunctionalStatus created 1
ReviewStatus created 1
DeletedControlledVocabulary created 1
InteractionEvent created 1
EntityFunctionalStatus created 1
Affiliation created 1
CatalystActivity created 1
DrugActionType created 1
PsiMod created 1
PositiveRegulation created 1
Species created 1
Event created 1
RNADrug created 1
TranscriptionalModification created 1
NonsenseMutation created 1
FragmentReplacedModification created 1
ReferenceRNASequence created 1
ReferenceIsoform created 1
GO_MolecularFunction created 1
ControlReference created 1
TranslationalModification created 1
ProteinDrug created 1
IntraChainCrosslinkedResidue created 1
_UpdateTracker created 1
GO_BiologicalProcess created 1
NegativePrecedingEvent created 1
Summation created 1
CatalystActivityReference created 1
NegativeGeneExpressionRegulation created 1
ReplacedResidue created 1
Drug created 1
Polymer created 1
ReferenceSequence created 1
ReferenceGeneProduct created 1
CandidateSet created 1
EvidenceType created 1
Reaction created 1
FragmentInsertionModification created 1
PhysicalEntity created 1
DatabaseObject created 1
ReferenceDNASequence created 1
ModifiedNucleotide created 1
FragmentModification created 1
_Release created 1
FailedReaction created 1
CrosslinkedResidue created 1
RetractionStatus created 1
StableIdentifierReleaseStatus created 1
AbstractModifiedResidue created 1
FrontPage created 1
Polymerisation created 1
FragmentDeletionModification created 1
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
DefinedSet authored 1
Complex authored 1
ReactionlikeEvent authored +
Polymerisation authored +
BlackBoxEvent authored +
PhysicalEntity authored 1
ProteinDrug authored 1
CellDevelopmentStep authored +
Pathway authored +
Depolymerisation authored +
SimpleEntity authored 1
EntityWithAccessionedSequence authored 1
EntitySet authored 1
CellLineagePath authored +
FailedReaction authored +
GenomeEncodedEntity authored 1
OtherEntity authored 1
Cell authored 1
Event authored +
RNADrug authored 1
CandidateSet authored 1
Reaction authored +
ChemicalDrug authored 1
InteractionEvent authored +
Drug authored 1
Polymer authored 1
CellDevelopmentStep structureModified +
Pathway structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
Event structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
PhysicalEntity edited +
ProteinDrug edited +
CellDevelopmentStep edited +
SimpleEntity edited +
Depolymerisation edited +
Pathway edited +
EntityWithAccessionedSequence edited +
EntitySet edited +
CellLineagePath edited +
FailedReaction edited +
GenomeEncodedEntity edited +
DefinedSet edited +
Complex edited +
ReactionlikeEvent edited +
BlackBoxEvent edited +
Polymerisation edited +
ChemicalDrug edited +
InteractionEvent edited +
Drug edited +
Polymer edited +
OtherEntity edited +
Cell edited +
Event edited +
CandidateSet edited +
RNADrug edited +
Reaction edited +
CandidateSet revised +
RNADrug revised +
Reaction revised +
OtherEntity revised +
Cell revised +
Event revised +
Drug revised +
Polymer revised +
InteractionEvent revised +
ChemicalDrug revised +
ReactionlikeEvent revised +
Polymerisation revised +
BlackBoxEvent revised +
DefinedSet revised +
Complex revised +
EntityWithAccessionedSequence revised +
CellLineagePath revised +
EntitySet revised +
FailedReaction revised +
GenomeEncodedEntity revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
ProteinDrug revised +
Depolymerisation revised +
Pathway revised +
SimpleEntity revised +
InteractionEvent reviewed +
ChemicalDrug reviewed +
Drug reviewed +
Polymer reviewed +
OtherEntity reviewed +
Cell reviewed +
Event reviewed +
CandidateSet reviewed +
RNADrug reviewed +
Reaction reviewed +
PhysicalEntity reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
Depolymerisation reviewed +
Pathway reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
EntitySet reviewed +
CellLineagePath reviewed +
GenomeEncodedEntity reviewed +
FailedReaction reviewed +
DefinedSet reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
BlackBoxEvent reviewed +
Polymerisation reviewed +
Anatomy modified +
Disease modified +
ReactionType modified +
ReferenceEntity modified +
Regulation modified +
PhysicalEntityCellType modified +
PositiveGeneExpressionRegulation modified +
PathwayDiagram modified +
Requirement modified +
InstanceEdit modified +
Publication modified +
_DeletedInstance modified +
ModifiedResidue modified +
MarkerReference modified +
GroupModifiedResidue modified +
Taxon modified +
ReactionlikeEvent modified +
Figure modified +
RegulationReference modified +
Book modified +
BlackBoxEvent modified +
InterChainCrosslinkedResidue modified +
Complex modified +
FunctionalStatusType modified +
DefinedSet modified +
DatabaseIdentifier modified +
EntityWithAccessionedSequence modified +
GeneticallyModifiedResidue modified +
ReferenceDatabase modified +
ReferenceMolecule modified +
SimpleEntity modified +
Depolymerisation modified +
Pathway modified +
ReferenceGroup modified +
URL modified +
StableIdentifier modified +
NegativeRegulation modified +
OtherEntity modified +
Cell modified +
ControlledVocabulary modified +
NegativePrecedingEventReason modified +
Compartment modified +
ChemicalDrug modified +
Person modified +
ReviewStatus modified +
FunctionalStatus modified +
LiteratureReference modified +
CellType modified +
ReferenceTherapeutic modified +
StableIdentifierHistory modified +
GenomeEncodedEntity modified +
SequenceOntology modified +
CellLineagePath modified +
EntitySet modified +
_Deleted modified +
ExternalOntology modified +
GO_CellularComponent modified +
CellDevelopmentStep modified +
NonsenseMutation modified +
TranscriptionalModification modified +
FragmentReplacedModification modified +
RNADrug modified +
GO_MolecularFunction modified +
ReferenceRNASequence modified +
ReferenceIsoform modified +
PositiveRegulation modified +
PsiMod modified +
DrugActionType modified +
Species modified +
Event modified +
Affiliation modified +
CatalystActivity modified +
InteractionEvent modified +
EntityFunctionalStatus modified +
DeletedControlledVocabulary modified +
Summation modified +
NegativePrecedingEvent modified +
GO_BiologicalProcess modified +
_UpdateTracker modified +
ControlReference modified +
TranslationalModification modified +
ProteinDrug modified +
IntraChainCrosslinkedResidue modified +
EvidenceType modified +
CandidateSet modified +
ReferenceGeneProduct modified +
FragmentInsertionModification modified +
Reaction modified +
ReferenceSequence modified +
ReplacedResidue modified +
NegativeGeneExpressionRegulation modified +
Polymer modified +
Drug modified +
CatalystActivityReference modified +
FrontPage modified +
AbstractModifiedResidue modified +
StableIdentifierReleaseStatus modified +
Polymerisation modified +
FragmentDeletionModification modified +
RetractionStatus modified +
FragmentModification modified +
_Release modified +
ModifiedNucleotide modified +
ReferenceDNASequence modified +
FailedReaction modified +
CrosslinkedResidue modified +
PhysicalEntity modified +
DatabaseObject modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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