Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Complex reviewed +
Reaction reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
EntitySet reviewed +
Depolymerisation reviewed +
Drug reviewed +
Cell reviewed +
CellLineagePath reviewed +
PhysicalEntity reviewed +
DefinedSet reviewed +
OtherEntity reviewed +
Polymerisation reviewed +
BlackBoxEvent reviewed +
CandidateSet reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
Polymer reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
InteractionEvent reviewed +
CellDevelopmentStep reviewed +
Polymerisation revised +
OtherEntity revised +
FailedReaction revised +
CandidateSet revised +
BlackBoxEvent revised +
RNADrug revised +
ProteinDrug revised +
Polymer revised +
ChemicalDrug revised +
InteractionEvent revised +
CellDevelopmentStep revised +
Complex revised +
Reaction revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
EntitySet revised +
Depolymerisation revised +
ReactionlikeEvent revised +
Event revised +
EntityWithAccessionedSequence revised +
Pathway revised +
Drug revised +
Cell revised +
CellLineagePath revised +
DefinedSet revised +
PhysicalEntity revised +
FragmentDeletionModification created 1
StableIdentifierReleaseStatus created 1
CellLineagePath created 1
ReactionlikeEvent created 1
Affiliation created 1
Book created 1
TranslationalModification created 1
NegativeGeneExpressionRegulation created 1
RetractionStatus created 1
SimpleEntity created 1
Species created 1
GO_MolecularFunction created 1
_Release created 1
RegulationReference created 1
ChemicalDrug created 1
PositiveGeneExpressionRegulation created 1
FunctionalStatusType created 1
Requirement created 1
BlackBoxEvent created 1
EvidenceType created 1
FailedReaction created 1
CandidateSet created 1
TranscriptionalModification created 1
OtherEntity created 1
Polymerisation created 1
ReferenceMolecule created 1
PositiveRegulation created 1
DatabaseObject created 1
PhysicalEntity created 1
DefinedSet created 1
PsiMod created 1
LiteratureReference created 1
Drug created 1
Cell created 1
Taxon created 1
Pathway created 1
InterChainCrosslinkedResidue created 1
CrosslinkedResidue created 1
Depolymerisation created 1
EntitySet created 1
GroupModifiedResidue created 1
GenomeEncodedEntity created 1
NegativePrecedingEventReason created 1
Reaction created 1
Complex created 1
GeneticallyModifiedResidue created 1
ReferenceTherapeutic created 1
SequenceOntology created 1
ReferenceSequence created 1
ModifiedResidue created 1
RNADrug created 1
NegativeRegulation created 1
FrontPage created 1
Person created 1
ModifiedNucleotide created 1
CatalystActivityReference created 1
FragmentInsertionModification created 1
GO_BiologicalProcess created 1
FragmentModification created 1
InstanceEdit created 1
EntityWithAccessionedSequence created 1
Regulation created 1
GO_CellularComponent created 1
_UpdateTracker created 1
CellType created 1
MarkerReference created 1
NegativePrecedingEvent created 1
ReferenceRNASequence created 1
ReferenceGroup created 1
Anatomy created 1
NonsenseMutation created 1
ExternalOntology created 1
FragmentReplacedModification created 1
InteractionEvent created 1
CellDevelopmentStep created 1
Disease created 1
Polymer created 1
ReplacedResidue created 1
ReactionType created 1
Publication created 1
PhysicalEntityCellType created 1
DatabaseIdentifier created 1
Summation created 1
ReferenceDNASequence created 1
FunctionalStatus created 1
ControlReference created 1
Compartment created 1
CatalystActivity created 1
ReferenceIsoform created 1
Event created 1
_DeletedInstance created 1
ReferenceEntity created 1
DeletedControlledVocabulary created 1
StableIdentifierHistory created 1
_Deleted created 1
Figure created 1
ReferenceGeneProduct created 1
EntityFunctionalStatus created 1
ReviewStatus created 1
ProteinDrug created 1
IntraChainCrosslinkedResidue created 1
StableIdentifier created 1
DrugActionType created 1
PathwayDiagram created 1
ReferenceDatabase created 1
URL created 1
AbstractModifiedResidue created 1
ControlledVocabulary created 1
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
Pathway structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
Reaction structureModified +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
_DeletedInstance modified +
Event modified +
ReferenceIsoform modified +
StableIdentifierHistory modified +
DeletedControlledVocabulary modified +
ReferenceEntity modified +
DrugActionType modified +
StableIdentifier modified +
IntraChainCrosslinkedResidue modified +
ProteinDrug modified +
ReviewStatus modified +
ReferenceGeneProduct modified +
EntityFunctionalStatus modified +
Figure modified +
_Deleted modified +
ControlledVocabulary modified +
AbstractModifiedResidue modified +
URL modified +
ReferenceDatabase modified +
PathwayDiagram modified +
CellType modified +
_UpdateTracker modified +
Regulation modified +
GO_CellularComponent modified +
EntityWithAccessionedSequence modified +
InstanceEdit modified +
FragmentReplacedModification modified +
ExternalOntology modified +
NonsenseMutation modified +
Anatomy modified +
ReferenceGroup modified +
NegativePrecedingEvent modified +
ReferenceRNASequence modified +
MarkerReference modified +
PhysicalEntityCellType modified +
Publication modified +
ReplacedResidue modified +
ReactionType modified +
Polymer modified +
Disease modified +
CellDevelopmentStep modified +
InteractionEvent modified +
CatalystActivity modified +
FunctionalStatus modified +
ReferenceDNASequence modified +
Compartment modified +
ControlReference modified +
Summation modified +
DatabaseIdentifier modified +
EntitySet modified +
Depolymerisation modified +
InterChainCrosslinkedResidue modified +
CrosslinkedResidue modified +
Pathway modified +
Drug modified +
Cell modified +
Taxon modified +
LiteratureReference modified +
DefinedSet modified +
PsiMod modified +
PhysicalEntity modified +
DatabaseObject modified +
GeneticallyModifiedResidue modified +
Reaction modified +
ReferenceTherapeutic modified +
Complex modified +
NegativePrecedingEventReason modified +
GenomeEncodedEntity modified +
GroupModifiedResidue modified +
NegativeRegulation modified +
RNADrug modified +
ModifiedResidue modified +
ReferenceSequence modified +
SequenceOntology modified +
GO_BiologicalProcess modified +
FragmentModification modified +
CatalystActivityReference modified +
FragmentInsertionModification modified +
Person modified +
ModifiedNucleotide modified +
FrontPage modified +
Affiliation modified +
ReactionlikeEvent modified +
StableIdentifierReleaseStatus modified +
CellLineagePath modified +
FragmentDeletionModification modified +
RegulationReference modified +
_Release modified +
Species modified +
GO_MolecularFunction modified +
SimpleEntity modified +
RetractionStatus modified +
NegativeGeneExpressionRegulation modified +
Book modified +
TranslationalModification modified +
PositiveGeneExpressionRegulation modified +
FunctionalStatusType modified +
Requirement modified +
ChemicalDrug modified +
PositiveRegulation modified +
Polymerisation modified +
ReferenceMolecule modified +
OtherEntity modified +
TranscriptionalModification modified +
CandidateSet modified +
FailedReaction modified +
EvidenceType modified +
BlackBoxEvent modified +
CandidateSet edited +
FailedReaction edited +
BlackBoxEvent edited +
Polymerisation edited +
OtherEntity edited +
ChemicalDrug edited +
CellDevelopmentStep edited +
InteractionEvent edited +
RNADrug edited +
ProteinDrug edited +
Polymer edited +
GenomeEncodedEntity edited +
SimpleEntity edited +
Reaction edited +
Complex edited +
Drug edited +
Cell edited +
CellLineagePath edited +
DefinedSet edited +
PhysicalEntity edited +
EntitySet edited +
Depolymerisation edited +
ReactionlikeEvent edited +
Pathway edited +
EntityWithAccessionedSequence edited +
Event edited +
Reaction authored +
Complex authored 1
SimpleEntity authored 1
GenomeEncodedEntity authored 1
Depolymerisation authored +
EntitySet authored 1
Event authored +
EntityWithAccessionedSequence authored 1
Pathway authored +
ReactionlikeEvent authored +
CellLineagePath authored +
DefinedSet authored 1
PhysicalEntity authored 1
Drug authored 1
Cell authored 1
Polymerisation authored +
OtherEntity authored 1
CandidateSet authored 1
FailedReaction authored +
BlackBoxEvent authored +
RNADrug authored 1
Polymer authored 1
ProteinDrug authored 1
CellDevelopmentStep authored +
InteractionEvent authored +
ChemicalDrug authored 1
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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