Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
RetractionStatus modified +
ModifiedNucleotide modified +
EvidenceType modified +
FragmentInsertionModification modified +
ChemicalDrug modified +
FragmentReplacedModification modified +
PathwayDiagram modified +
Reaction modified +
ReferenceIsoform modified +
DeletedControlledVocabulary modified +
NegativePrecedingEventReason modified +
CrosslinkedResidue modified +
ControlReference modified +
PhysicalEntity modified +
StableIdentifierHistory modified +
InstanceEdit modified +
ReferenceMolecule modified +
DatabaseIdentifier modified +
SequenceOntology modified +
FunctionalStatus modified +
GroupModifiedResidue modified +
CatalystActivity modified +
ReferenceGeneProduct modified +
FailedReaction modified +
DrugActionType modified +
EntityWithAccessionedSequence modified +
FragmentDeletionModification modified +
NegativeGeneExpressionRegulation modified +
Anatomy modified +
ReferenceDNASequence modified +
GenomeEncodedEntity modified +
GeneticallyModifiedResidue modified +
PhysicalEntityCellType modified +
Polymerisation modified +
StableIdentifier modified +
ProteinDrug modified +
Summation modified +
MarkerReference modified +
PositiveGeneExpressionRegulation modified +
ReferenceSequence modified +
CandidateSet modified +
ExternalOntology modified +
Compartment modified +
Pathway modified +
ReferenceEntity modified +
ReviewStatus modified +
ReferenceTherapeutic modified +
Regulation modified +
URL modified +
NonsenseMutation modified +
ReferenceRNASequence modified +
FragmentModification modified +
FunctionalStatusType modified +
Depolymerisation modified +
Polymer modified +
Figure modified +
Cell modified +
FrontPage modified +
ReplacedResidue modified +
LiteratureReference modified +
ReferenceDatabase modified +
Book modified +
_DeletedInstance modified +
OtherEntity modified +
BlackBoxEvent modified +
Drug modified +
EntityFunctionalStatus modified +
SimpleEntity modified +
GO_MolecularFunction modified +
PsiMod modified +
RegulationReference modified +
_UpdateTracker modified +
DefinedSet modified +
NegativeRegulation modified +
ReferenceGroup modified +
ControlledVocabulary modified +
TranscriptionalModification modified +
IntraChainCrosslinkedResidue modified +
Taxon modified +
EntitySet modified +
CellType modified +
StableIdentifierReleaseStatus modified +
InteractionEvent modified +
ModifiedResidue modified +
InterChainCrosslinkedResidue modified +
Event modified +
Publication modified +
_Deleted modified +
DatabaseObject modified +
ReactionlikeEvent modified +
_Release modified +
GO_BiologicalProcess modified +
Requirement modified +
TranslationalModification modified +
Disease modified +
CellDevelopmentStep modified +
GO_CellularComponent modified +
NegativePrecedingEvent modified +
Person modified +
CellLineagePath modified +
CatalystActivityReference modified +
RNADrug modified +
PositiveRegulation modified +
Species modified +
Complex modified +
ReactionType modified +
AbstractModifiedResidue modified +
Affiliation modified +
Complex edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
SimpleEntity edited +
Pathway edited +
RNADrug edited +
FailedReaction edited +
BlackBoxEvent edited +
OtherEntity edited +
CandidateSet edited +
CellDevelopmentStep edited +
Drug edited +
PhysicalEntity edited +
Event edited +
ReactionlikeEvent edited +
InteractionEvent edited +
Reaction edited +
ProteinDrug edited +
Cell edited +
ChemicalDrug edited +
Depolymerisation edited +
EntitySet edited +
Polymer edited +
Polymerisation edited +
DefinedSet edited +
GenomeEncodedEntity edited +
GenomeEncodedEntity reviewed +
DefinedSet reviewed +
Polymer reviewed +
Polymerisation reviewed +
EntitySet reviewed +
Depolymerisation reviewed +
ChemicalDrug reviewed +
Cell reviewed +
ProteinDrug reviewed +
Reaction reviewed +
InteractionEvent reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
PhysicalEntity reviewed +
Drug reviewed +
CellDevelopmentStep reviewed +
CandidateSet reviewed +
BlackBoxEvent reviewed +
OtherEntity reviewed +
RNADrug reviewed +
FailedReaction reviewed +
Pathway reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
Complex reviewed +
ModifiedNucleotide created 1
EvidenceType created 1
FragmentInsertionModification created 1
RetractionStatus created 1
FragmentReplacedModification created 1
PathwayDiagram created 1
Reaction created 1
ReferenceIsoform created 1
ChemicalDrug created 1
DatabaseIdentifier created 1
FunctionalStatus created 1
ReferenceMolecule created 1
SequenceOntology created 1
GroupModifiedResidue created 1
CatalystActivity created 1
CrosslinkedResidue created 1
DeletedControlledVocabulary created 1
NegativePrecedingEventReason created 1
ControlReference created 1
PhysicalEntity created 1
InstanceEdit created 1
StableIdentifierHistory created 1
EntityWithAccessionedSequence created 1
FragmentDeletionModification created 1
NegativeGeneExpressionRegulation created 1
ReferenceGeneProduct created 1
FailedReaction created 1
DrugActionType created 1
PhysicalEntityCellType created 1
Polymerisation created 1
Anatomy created 1
ReferenceDNASequence created 1
GenomeEncodedEntity created 1
GeneticallyModifiedResidue created 1
ProteinDrug created 1
StableIdentifier created 1
Summation created 1
CandidateSet created 1
PositiveGeneExpressionRegulation created 1
MarkerReference created 1
ReferenceSequence created 1
ReferenceEntity created 1
ReviewStatus created 1
ReferenceTherapeutic created 1
ExternalOntology created 1
Compartment created 1
Pathway created 1
FunctionalStatusType created 1
Depolymerisation created 1
FragmentModification created 1
Polymer created 1
Figure created 1
Regulation created 1
URL created 1
NonsenseMutation created 1
ReferenceRNASequence created 1
FrontPage created 1
ReplacedResidue created 1
Cell created 1
_DeletedInstance created 1
Book created 1
BlackBoxEvent created 1
OtherEntity created 1
Drug created 1
EntityFunctionalStatus created 1
LiteratureReference created 1
ReferenceDatabase created 1
PsiMod created 1
RegulationReference created 1
SimpleEntity created 1
GO_MolecularFunction created 1
IntraChainCrosslinkedResidue created 1
EntitySet created 1
Taxon created 1
_UpdateTracker created 1
DefinedSet created 1
NegativeRegulation created 1
ReferenceGroup created 1
ControlledVocabulary created 1
TranscriptionalModification created 1
InteractionEvent created 1
InterChainCrosslinkedResidue created 1
ModifiedResidue created 1
CellType created 1
StableIdentifierReleaseStatus created 1
GO_BiologicalProcess created 1
Requirement created 1
Disease created 1
TranslationalModification created 1
CellDevelopmentStep created 1
Event created 1
Publication created 1
_Deleted created 1
DatabaseObject created 1
ReactionlikeEvent created 1
_Release created 1
Species created 1
Complex created 1
ReactionType created 1
AbstractModifiedResidue created 1
Affiliation created 1
CatalystActivityReference created 1
CellLineagePath created 1
GO_CellularComponent created 1
Person created 1
NegativePrecedingEvent created 1
RNADrug created 1
PositiveRegulation created 1
_Deleted replacementInstances +
Event structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
Pathway structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
Reaction structureModified +
ProteinDrug authored 1
ChemicalDrug authored 1
Cell authored 1
InteractionEvent authored +
Reaction authored +
DefinedSet authored 1
GenomeEncodedEntity authored 1
Depolymerisation authored +
Polymer authored 1
Polymerisation authored +
EntitySet authored 1
CellLineagePath authored +
SimpleEntity authored 1
FailedReaction authored +
RNADrug authored 1
Pathway authored +
Complex authored 1
EntityWithAccessionedSequence authored 1
Event authored +
PhysicalEntity authored 1
ReactionlikeEvent authored +
BlackBoxEvent authored +
OtherEntity authored 1
Drug authored 1
CandidateSet authored 1
CellDevelopmentStep authored +
FailedReaction internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
ProteinDrug revised +
ChemicalDrug revised +
Cell revised +
InteractionEvent revised +
Reaction revised +
DefinedSet revised +
GenomeEncodedEntity revised +
Depolymerisation revised +
Polymer revised +
Polymerisation revised +
EntitySet revised +
SimpleEntity revised +
CellLineagePath revised +
FailedReaction revised +
RNADrug revised +
Pathway revised +
Complex revised +
EntityWithAccessionedSequence revised +
Event revised +
PhysicalEntity revised +
ReactionlikeEvent revised +
OtherEntity revised +
BlackBoxEvent revised +
Drug revised +
CandidateSet revised +
CellDevelopmentStep revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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