Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Compartment modified +
Reaction modified +
ReferenceEntity modified +
ReferenceMolecule modified +
FragmentInsertionModification modified +
ReferenceDNASequence modified +
GroupModifiedResidue modified +
ModifiedResidue modified +
Polymerisation modified +
FunctionalStatus modified +
BlackBoxEvent modified +
Depolymerisation modified +
PathwayDiagram modified +
FrontPage modified +
CatalystActivity modified +
TranslationalModification modified +
InterChainCrosslinkedResidue modified +
PhysicalEntity modified +
ReferenceIsoform modified +
GO_MolecularFunction modified +
GenomeEncodedEntity modified +
InstanceEdit modified +
ProteinDrug modified +
URL modified +
Book modified +
EntityWithAccessionedSequence modified +
RegulationReference modified +
ReferenceSequence modified +
NonsenseMutation modified +
PhysicalEntityCellType modified +
Anatomy modified +
ReactionlikeEvent modified +
ReviewStatus modified +
DefinedSet modified +
IntraChainCrosslinkedResidue modified +
Regulation modified +
SimpleEntity modified +
Complex modified +
Taxon modified +
ReferenceTherapeutic modified +
ReferenceGroup modified +
Person modified +
DrugActionType modified +
ReferenceRNASequence modified +
NegativeGeneExpressionRegulation modified +
Disease modified +
InteractionEvent modified +
GeneticallyModifiedResidue modified +
Publication modified +
ControlReference modified +
NegativePrecedingEvent modified +
CandidateSet modified +
PositiveRegulation modified +
EvidenceType modified +
Affiliation modified +
ReplacedResidue modified +
DatabaseObject modified +
_Release modified +
EntityFunctionalStatus modified +
GO_BiologicalProcess modified +
RetractionStatus modified +
StableIdentifierHistory modified +
FragmentReplacedModification modified +
Figure modified +
DeletedControlledVocabulary modified +
Requirement modified +
SequenceOntology modified +
_UpdateTracker modified +
NegativeRegulation modified +
FailedReaction modified +
CatalystActivityReference modified +
ReferenceDatabase modified +
PositiveGeneExpressionRegulation modified +
Pathway modified +
FragmentModification modified +
CrosslinkedResidue modified +
ReactionType modified +
GO_CellularComponent modified +
AbstractModifiedResidue modified +
FunctionalStatusType modified +
ExternalOntology modified +
ControlledVocabulary modified +
Event modified +
OtherEntity modified +
MarkerReference modified +
ReferenceGeneProduct modified +
ChemicalDrug modified +
Cell modified +
StableIdentifierReleaseStatus modified +
_DeletedInstance modified +
ModifiedNucleotide modified +
StableIdentifier modified +
NegativePrecedingEventReason modified +
CellType modified +
Polymer modified +
CellDevelopmentStep modified +
_Deleted modified +
PsiMod modified +
TranscriptionalModification modified +
Species modified +
Drug modified +
Summation modified +
FragmentDeletionModification modified +
DatabaseIdentifier modified +
RNADrug modified +
CellLineagePath modified +
LiteratureReference modified +
EntitySet modified +
ChemicalDrug reviewed +
Cell reviewed +
SimpleEntity reviewed +
Reaction reviewed +
Complex reviewed +
Polymer reviewed +
Polymerisation reviewed +
CellDevelopmentStep reviewed +
Depolymerisation reviewed +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
FailedReaction reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
GenomeEncodedEntity reviewed +
Drug reviewed +
ProteinDrug reviewed +
RNADrug reviewed +
CandidateSet reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
ReactionlikeEvent reviewed +
EntitySet reviewed +
Event reviewed +
DefinedSet reviewed +
OtherEntity reviewed +
ReactionlikeEvent revised +
EntitySet revised +
Event revised +
DefinedSet revised +
OtherEntity revised +
CandidateSet revised +
RNADrug revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
Drug revised +
ProteinDrug revised +
Pathway revised +
GenomeEncodedEntity revised +
PhysicalEntity revised +
Depolymerisation revised +
BlackBoxEvent revised +
FailedReaction revised +
InteractionEvent revised +
Polymerisation revised +
CellDevelopmentStep revised +
Polymer revised +
SimpleEntity revised +
Reaction revised +
Complex revised +
ChemicalDrug revised +
Cell revised +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
Reaction structureModified +
Pathway structureModified +
_Deleted replacementInstances +
PhysicalEntity edited +
Pathway edited +
GenomeEncodedEntity edited +
Drug edited +
ProteinDrug edited +
RNADrug edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
ReactionlikeEvent edited +
Event edited +
EntitySet edited +
DefinedSet edited +
OtherEntity edited +
ChemicalDrug edited +
Cell edited +
SimpleEntity edited +
Complex edited +
Reaction edited +
Polymer edited +
Polymerisation edited +
CellDevelopmentStep edited +
Depolymerisation edited +
BlackBoxEvent edited +
FailedReaction edited +
InteractionEvent edited +
ChemicalDrug authored 1
Cell authored 1
SimpleEntity authored 1
Reaction authored +
Complex authored 1
Depolymerisation authored +
BlackBoxEvent authored +
FailedReaction authored +
InteractionEvent authored +
Polymer authored 1
Polymerisation authored +
CellDevelopmentStep authored +
Drug authored 1
ProteinDrug authored 1
PhysicalEntity authored 1
Pathway authored +
GenomeEncodedEntity authored 1
Event authored +
ReactionlikeEvent authored +
EntitySet authored 1
OtherEntity authored 1
DefinedSet authored 1
CandidateSet authored 1
RNADrug authored 1
CellLineagePath authored +
EntityWithAccessionedSequence authored 1
ReferenceEntity created 1
ReferenceMolecule created 1
Compartment created 1
Reaction created 1
FrontPage created 1
PathwayDiagram created 1
Depolymerisation created 1
BlackBoxEvent created 1
CatalystActivity created 1
TranslationalModification created 1
GroupModifiedResidue created 1
FragmentInsertionModification created 1
ReferenceDNASequence created 1
FunctionalStatus created 1
ModifiedResidue created 1
Polymerisation created 1
ProteinDrug created 1
InstanceEdit created 1
Book created 1
URL created 1
PhysicalEntity created 1
ReferenceIsoform created 1
GO_MolecularFunction created 1
InterChainCrosslinkedResidue created 1
GenomeEncodedEntity created 1
Anatomy created 1
PhysicalEntityCellType created 1
NonsenseMutation created 1
DefinedSet created 1
ReactionlikeEvent created 1
ReviewStatus created 1
EntityWithAccessionedSequence created 1
RegulationReference created 1
ReferenceSequence created 1
ReferenceGroup created 1
Taxon created 1
ReferenceTherapeutic created 1
Complex created 1
Regulation created 1
IntraChainCrosslinkedResidue created 1
SimpleEntity created 1
InteractionEvent created 1
Disease created 1
NegativeGeneExpressionRegulation created 1
ReferenceRNASequence created 1
DrugActionType created 1
Person created 1
ControlReference created 1
Publication created 1
NegativePrecedingEvent created 1
GeneticallyModifiedResidue created 1
Affiliation created 1
ReplacedResidue created 1
_Release created 1
DatabaseObject created 1
PositiveRegulation created 1
CandidateSet created 1
EvidenceType created 1
FragmentReplacedModification created 1
StableIdentifierHistory created 1
RetractionStatus created 1
Figure created 1
EntityFunctionalStatus created 1
GO_BiologicalProcess created 1
NegativeRegulation created 1
FailedReaction created 1
CatalystActivityReference created 1
SequenceOntology created 1
Requirement created 1
_UpdateTracker created 1
DeletedControlledVocabulary created 1
CrosslinkedResidue created 1
FragmentModification created 1
GO_CellularComponent created 1
AbstractModifiedResidue created 1
ReactionType created 1
ReferenceDatabase created 1
PositiveGeneExpressionRegulation created 1
Pathway created 1
MarkerReference created 1
OtherEntity created 1
Event created 1
FunctionalStatusType created 1
ControlledVocabulary created 1
ExternalOntology created 1
CellType created 1
NegativePrecedingEventReason created 1
StableIdentifier created 1
_DeletedInstance created 1
Cell created 1
StableIdentifierReleaseStatus created 1
ChemicalDrug created 1
ReferenceGeneProduct created 1
ModifiedNucleotide created 1
TranscriptionalModification created 1
Polymer created 1
PsiMod created 1
CellDevelopmentStep created 1
_Deleted created 1
Drug created 1
FragmentDeletionModification created 1
Summation created 1
Species created 1
LiteratureReference created 1
EntitySet created 1
CellLineagePath created 1
DatabaseIdentifier created 1
RNADrug created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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