Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
OtherEntity edited +
PhysicalEntity edited +
CellLineagePath edited +
BlackBoxEvent edited +
Complex edited +
Drug edited +
ProteinDrug edited +
SimpleEntity edited +
EntitySet edited +
ReactionlikeEvent edited +
EntityWithAccessionedSequence edited +
Reaction edited +
FailedReaction edited +
RNADrug edited +
GenomeEncodedEntity edited +
DefinedSet edited +
Cell edited +
CellDevelopmentStep edited +
Depolymerisation edited +
Pathway edited +
Event edited +
Polymerisation edited +
ChemicalDrug edited +
Polymer edited +
InteractionEvent edited +
CandidateSet edited +
EntitySet created 1
NonsenseMutation created 1
Requirement created 1
ReferenceEntity created 1
FunctionalStatus created 1
Summation created 1
ReplacedResidue created 1
NegativeRegulation created 1
Complex created 1
PhysicalEntity created 1
OtherEntity created 1
StableIdentifierHistory created 1
_Deleted created 1
SimpleEntity created 1
Drug created 1
SequenceOntology created 1
TranscriptionalModification created 1
GO_BiologicalProcess created 1
ReferenceDNASequence created 1
PathwayDiagram created 1
InteractionEvent created 1
CatalystActivity created 1
FrontPage created 1
ReferenceRNASequence created 1
ReferenceDatabase created 1
ReferenceGroup created 1
NegativePrecedingEvent created 1
_UpdateTracker created 1
Figure created 1
ReactionlikeEvent created 1
MarkerReference created 1
NegativePrecedingEventReason created 1
Cell created 1
DefinedSet created 1
NegativeGeneExpressionRegulation created 1
GeneticallyModifiedResidue created 1
Reaction created 1
PositiveGeneExpressionRegulation created 1
Anatomy created 1
BlackBoxEvent created 1
Disease created 1
CellLineagePath created 1
ReviewStatus created 1
_Release created 1
InterChainCrosslinkedResidue created 1
ExternalOntology created 1
ControlledVocabulary created 1
ModifiedResidue created 1
DeletedControlledVocabulary created 1
Regulation created 1
GO_CellularComponent created 1
PositiveRegulation created 1
_DeletedInstance created 1
Event created 1
PsiMod created 1
AbstractModifiedResidue created 1
StableIdentifierReleaseStatus created 1
FragmentModification created 1
DatabaseIdentifier created 1
GO_MolecularFunction created 1
FailedReaction created 1
Taxon created 1
GenomeEncodedEntity created 1
CrosslinkedResidue created 1
StableIdentifier created 1
ControlReference created 1
ReferenceSequence created 1
Species created 1
FragmentInsertionModification created 1
LiteratureReference created 1
TranslationalModification created 1
ReferenceTherapeutic created 1
FunctionalStatusType created 1
ChemicalDrug created 1
Affiliation created 1
Publication created 1
CandidateSet created 1
ModifiedNucleotide created 1
DrugActionType created 1
DatabaseObject created 1
FragmentReplacedModification created 1
Compartment created 1
Depolymerisation created 1
CellDevelopmentStep created 1
URL created 1
Polymerisation created 1
EvidenceType created 1
ReferenceMolecule created 1
CellType created 1
EntityFunctionalStatus created 1
RNADrug created 1
InstanceEdit created 1
Person created 1
EntityWithAccessionedSequence created 1
GroupModifiedResidue created 1
PhysicalEntityCellType created 1
ProteinDrug created 1
ReactionType created 1
ReferenceGeneProduct created 1
Polymer created 1
CatalystActivityReference created 1
ReferenceIsoform created 1
Book created 1
Pathway created 1
RetractionStatus created 1
FragmentDeletionModification created 1
IntraChainCrosslinkedResidue created 1
RegulationReference created 1
_Deleted replacementInstances +
EntityWithAccessionedSequence revised +
Reaction revised +
RNADrug revised +
FailedReaction revised +
Cell revised +
DefinedSet revised +
GenomeEncodedEntity revised +
EntitySet revised +
ReactionlikeEvent revised +
Drug revised +
ProteinDrug revised +
SimpleEntity revised +
OtherEntity revised +
PhysicalEntity revised +
CellLineagePath revised +
Complex revised +
BlackBoxEvent revised +
InteractionEvent revised +
CandidateSet revised +
ChemicalDrug revised +
Polymer revised +
Polymerisation revised +
CellDevelopmentStep revised +
Pathway revised +
Depolymerisation revised +
Event revised +
EntityWithAccessionedSequence authored 1
Reaction authored +
RNADrug authored 1
FailedReaction authored +
Cell authored 1
DefinedSet authored 1
GenomeEncodedEntity authored 1
EntitySet authored 1
ReactionlikeEvent authored +
Drug authored 1
ProteinDrug authored 1
SimpleEntity authored 1
PhysicalEntity authored 1
OtherEntity authored 1
CellLineagePath authored +
BlackBoxEvent authored +
Complex authored 1
InteractionEvent authored +
CandidateSet authored 1
ChemicalDrug authored 1
Polymer authored 1
Polymerisation authored +
CellDevelopmentStep authored +
Pathway authored +
Depolymerisation authored +
Event authored +
Reaction structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
Event structureModified +
Depolymerisation structureModified +
Pathway structureModified +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
CandidateSet reviewed +
InteractionEvent reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
Polymerisation reviewed +
Event reviewed +
Pathway reviewed +
Depolymerisation reviewed +
CellDevelopmentStep reviewed +
GenomeEncodedEntity reviewed +
DefinedSet reviewed +
Cell reviewed +
FailedReaction reviewed +
RNADrug reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
ReactionlikeEvent reviewed +
EntitySet reviewed +
SimpleEntity reviewed +
ProteinDrug reviewed +
Drug reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
CellLineagePath reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
DeletedControlledVocabulary modified +
GO_CellularComponent modified +
Regulation modified +
ControlledVocabulary modified +
ModifiedResidue modified +
ExternalOntology modified +
FragmentModification modified +
AbstractModifiedResidue modified +
StableIdentifierReleaseStatus modified +
PsiMod modified +
_DeletedInstance modified +
PositiveRegulation modified +
Event modified +
GeneticallyModifiedResidue modified +
Reaction modified +
DefinedSet modified +
NegativeGeneExpressionRegulation modified +
Cell modified +
NegativePrecedingEventReason modified +
Figure modified +
ReactionlikeEvent modified +
MarkerReference modified +
_Release modified +
InterChainCrosslinkedResidue modified +
ReviewStatus modified +
CellLineagePath modified +
Disease modified +
PositiveGeneExpressionRegulation modified +
Anatomy modified +
BlackBoxEvent modified +
InteractionEvent modified +
CatalystActivity modified +
FrontPage modified +
PathwayDiagram modified +
ReferenceDNASequence modified +
GO_BiologicalProcess modified +
TranscriptionalModification modified +
NegativePrecedingEvent modified +
_UpdateTracker modified +
ReferenceGroup modified +
ReferenceRNASequence modified +
ReferenceDatabase modified +
FunctionalStatus modified +
NonsenseMutation modified +
Requirement modified +
ReferenceEntity modified +
EntitySet modified +
Drug modified +
SequenceOntology modified +
SimpleEntity modified +
OtherEntity modified +
PhysicalEntity modified +
StableIdentifierHistory modified +
_Deleted modified +
Summation modified +
ReplacedResidue modified +
NegativeRegulation modified +
Complex modified +
Book modified +
CatalystActivityReference modified +
ReferenceIsoform modified +
Polymer modified +
ReactionType modified +
ReferenceGeneProduct modified +
IntraChainCrosslinkedResidue modified +
RegulationReference modified +
FragmentDeletionModification modified +
RetractionStatus modified +
Pathway modified +
EntityWithAccessionedSequence modified +
Person modified +
RNADrug modified +
EntityFunctionalStatus modified +
CellType modified +
InstanceEdit modified +
EvidenceType modified +
ReferenceMolecule modified +
PhysicalEntityCellType modified +
ProteinDrug modified +
GroupModifiedResidue modified +
DrugActionType modified +
DatabaseObject modified +
FragmentReplacedModification modified +
ModifiedNucleotide modified +
Publication modified +
CandidateSet modified +
Affiliation modified +
FunctionalStatusType modified +
ChemicalDrug modified +
ReferenceTherapeutic modified +
Polymerisation modified +
CellDevelopmentStep modified +
URL modified +
Compartment modified +
Depolymerisation modified +
CrosslinkedResidue modified +
FailedReaction modified +
GenomeEncodedEntity modified +
Taxon modified +
GO_MolecularFunction modified +
DatabaseIdentifier modified +
TranslationalModification modified +
LiteratureReference modified +
Species modified +
ReferenceSequence modified +
ControlReference modified +
FragmentInsertionModification modified +
StableIdentifier modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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