Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionType modified +
ModifiedResidue modified +
GO_BiologicalProcess modified +
Event modified +
Figure modified +
ReferenceMolecule modified +
DatabaseIdentifier modified +
FunctionalStatus modified +
Compartment modified +
GroupModifiedResidue modified +
DatabaseObject modified +
FragmentInsertionModification modified +
ControlReference modified +
ExternalOntology modified +
ReferenceSequence modified +
URL modified +
Complex modified +
DrugActionType modified +
ReferenceRNASequence modified +
CandidateSet modified +
SimpleEntity modified +
NegativeGeneExpressionRegulation modified +
SequenceOntology modified +
ReferenceGeneProduct modified +
AbstractModifiedResidue modified +
CellLineagePath modified +
EntityFunctionalStatus modified +
Drug modified +
ReferenceGroup modified +
ReplacedResidue modified +
PhysicalEntityCellType modified +
NegativePrecedingEvent modified +
Cell modified +
GO_CellularComponent modified +
ReferenceEntity modified +
_DeletedInstance modified +
StableIdentifier modified +
GenomeEncodedEntity modified +
LiteratureReference modified +
Reaction modified +
_Release modified +
ModifiedNucleotide modified +
Summation modified +
CatalystActivity modified +
Disease modified +
ReferenceDatabase modified +
EntityWithAccessionedSequence modified +
Person modified +
OtherEntity modified +
DeletedControlledVocabulary modified +
NegativePrecedingEventReason modified +
Depolymerisation modified +
EntitySet modified +
FrontPage modified +
ReactionlikeEvent modified +
FunctionalStatusType modified +
IntraChainCrosslinkedResidue modified +
RNADrug modified +
Polymer modified +
FragmentReplacedModification modified +
CellType modified +
InterChainCrosslinkedResidue modified +
ReviewStatus modified +
ControlledVocabulary modified +
StableIdentifierHistory modified +
Anatomy modified +
PhysicalEntity modified +
CatalystActivityReference modified +
StableIdentifierReleaseStatus modified +
BlackBoxEvent modified +
Taxon modified +
Book modified +
_Deleted modified +
DefinedSet modified +
MarkerReference modified +
CrosslinkedResidue modified +
NegativeRegulation modified +
TranscriptionalModification modified +
NonsenseMutation modified +
ChemicalDrug modified +
PositiveRegulation modified +
EvidenceType modified +
_UpdateTracker modified +
ReferenceDNASequence modified +
TranslationalModification modified +
Publication modified +
ReferenceIsoform modified +
GeneticallyModifiedResidue modified +
Species modified +
Requirement modified +
FragmentModification modified +
Pathway modified +
Regulation modified +
RegulationReference modified +
ProteinDrug modified +
PsiMod modified +
FailedReaction modified +
PositiveGeneExpressionRegulation modified +
CellDevelopmentStep modified +
Polymerisation modified +
PathwayDiagram modified +
GO_MolecularFunction modified +
InstanceEdit modified +
FragmentDeletionModification modified +
ReferenceTherapeutic modified +
Affiliation modified +
RetractionStatus modified +
InteractionEvent modified +
InteractionEvent authored +
CellLineagePath authored +
Drug authored 1
ReactionlikeEvent authored +
ChemicalDrug authored 1
Polymer authored 1
RNADrug authored 1
OtherEntity authored 1
EntityWithAccessionedSequence authored 1
SimpleEntity authored 1
Depolymerisation authored +
EntitySet authored 1
CandidateSet authored 1
Polymerisation authored +
ProteinDrug authored 1
Complex authored 1
FailedReaction authored +
CellDevelopmentStep authored +
DefinedSet authored 1
Pathway authored +
BlackBoxEvent authored +
Reaction authored +
PhysicalEntity authored 1
GenomeEncodedEntity authored 1
Cell authored 1
Event authored +
Event reviewed +
Cell reviewed +
PhysicalEntity reviewed +
GenomeEncodedEntity reviewed +
Reaction reviewed +
BlackBoxEvent reviewed +
Pathway reviewed +
DefinedSet reviewed +
Polymerisation reviewed +
ProteinDrug reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
FailedReaction reviewed +
Depolymerisation reviewed +
EntitySet reviewed +
SimpleEntity reviewed +
CandidateSet reviewed +
OtherEntity reviewed +
EntityWithAccessionedSequence reviewed +
ChemicalDrug reviewed +
Polymer reviewed +
RNADrug reviewed +
ReactionlikeEvent reviewed +
Drug reviewed +
InteractionEvent reviewed +
CellLineagePath reviewed +
PhysicalEntity revised +
GenomeEncodedEntity revised +
Cell revised +
Event revised +
Pathway revised +
BlackBoxEvent revised +
Reaction revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
Depolymerisation revised +
SimpleEntity revised +
CandidateSet revised +
Polymerisation revised +
CellDevelopmentStep revised +
Complex revised +
ProteinDrug revised +
FailedReaction revised +
DefinedSet revised +
InteractionEvent revised +
CellLineagePath revised +
Drug revised +
ReactionlikeEvent revised +
ChemicalDrug revised +
Polymer revised +
RNADrug revised +
BlackBoxEvent edited +
Pathway edited +
Reaction edited +
GenomeEncodedEntity edited +
PhysicalEntity edited +
Event edited +
Cell edited +
Drug edited +
CellLineagePath edited +
InteractionEvent edited +
RNADrug edited +
Polymer edited +
ChemicalDrug edited +
ReactionlikeEvent edited +
CandidateSet edited +
EntitySet edited +
Depolymerisation edited +
SimpleEntity edited +
EntityWithAccessionedSequence edited +
OtherEntity edited +
DefinedSet edited +
ProteinDrug edited +
Complex edited +
CellDevelopmentStep edited +
FailedReaction edited +
Polymerisation edited +
_Deleted replacementInstances +
ReferenceRNASequence created 1
DrugActionType created 1
URL created 1
Complex created 1
SimpleEntity created 1
CandidateSet created 1
SequenceOntology created 1
ReferenceGeneProduct created 1
NegativeGeneExpressionRegulation created 1
ReferenceGroup created 1
Drug created 1
EntityFunctionalStatus created 1
AbstractModifiedResidue created 1
CellLineagePath created 1
Figure created 1
Event created 1
GO_BiologicalProcess created 1
ModifiedResidue created 1
ReactionType created 1
DatabaseIdentifier created 1
ReferenceMolecule created 1
ControlReference created 1
FragmentInsertionModification created 1
DatabaseObject created 1
FunctionalStatus created 1
Compartment created 1
GroupModifiedResidue created 1
ReferenceSequence created 1
ExternalOntology created 1
Disease created 1
EntitySet created 1
Depolymerisation created 1
DeletedControlledVocabulary created 1
NegativePrecedingEventReason created 1
OtherEntity created 1
Person created 1
EntityWithAccessionedSequence created 1
ReferenceDatabase created 1
FragmentReplacedModification created 1
Polymer created 1
RNADrug created 1
FunctionalStatusType created 1
IntraChainCrosslinkedResidue created 1
FrontPage created 1
ReactionlikeEvent created 1
CellType created 1
GO_CellularComponent created 1
NegativePrecedingEvent created 1
PhysicalEntityCellType created 1
Cell created 1
ReplacedResidue created 1
StableIdentifier created 1
GenomeEncodedEntity created 1
_DeletedInstance created 1
ReferenceEntity created 1
Summation created 1
_Release created 1
Reaction created 1
ModifiedNucleotide created 1
LiteratureReference created 1
CatalystActivity created 1
DefinedSet created 1
_Deleted created 1
NegativeRegulation created 1
CrosslinkedResidue created 1
MarkerReference created 1
ChemicalDrug created 1
NonsenseMutation created 1
TranscriptionalModification created 1
EvidenceType created 1
PositiveRegulation created 1
ReviewStatus created 1
InterChainCrosslinkedResidue created 1
PhysicalEntity created 1
Anatomy created 1
ControlledVocabulary created 1
StableIdentifierHistory created 1
CatalystActivityReference created 1
Book created 1
BlackBoxEvent created 1
Taxon created 1
StableIdentifierReleaseStatus created 1
PathwayDiagram created 1
Polymerisation created 1
PositiveGeneExpressionRegulation created 1
PsiMod created 1
ProteinDrug created 1
CellDevelopmentStep created 1
FailedReaction created 1
Affiliation created 1
ReferenceTherapeutic created 1
FragmentDeletionModification created 1
InstanceEdit created 1
GO_MolecularFunction created 1
InteractionEvent created 1
RetractionStatus created 1
Publication created 1
TranslationalModification created 1
ReferenceDNASequence created 1
_UpdateTracker created 1
Species created 1
Requirement created 1
GeneticallyModifiedResidue created 1
ReferenceIsoform created 1
RegulationReference created 1
Regulation created 1
Pathway created 1
FragmentModification created 1
InteractionEvent internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
Depolymerisation structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
Event structureModified +
CellLineagePath structureModified +
Pathway structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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