Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
FailedReaction authored +
Polymerisation authored +
PhysicalEntity authored 1
InteractionEvent authored +
Event authored +
RNADrug authored 1
Reaction authored +
GenomeEncodedEntity authored 1
EntityWithAccessionedSequence authored 1
CellLineagePath authored +
ChemicalDrug authored 1
Depolymerisation authored +
CellDevelopmentStep authored +
Polymer authored 1
ReactionlikeEvent authored +
Complex authored 1
Drug authored 1
CandidateSet authored 1
DefinedSet authored 1
OtherEntity authored 1
BlackBoxEvent authored +
Pathway authored +
SimpleEntity authored 1
Cell authored 1
EntitySet authored 1
ProteinDrug authored 1
EntityWithAccessionedSequence revised +
GenomeEncodedEntity revised +
Reaction revised +
Event revised +
RNADrug revised +
InteractionEvent revised +
PhysicalEntity revised +
Polymerisation revised +
FailedReaction revised +
Depolymerisation revised +
ChemicalDrug revised +
CellLineagePath revised +
CandidateSet revised +
Drug revised +
Complex revised +
Polymer revised +
ReactionlikeEvent revised +
CellDevelopmentStep revised +
ProteinDrug revised +
EntitySet revised +
Cell revised +
Pathway revised +
SimpleEntity revised +
OtherEntity revised +
BlackBoxEvent revised +
DefinedSet revised +
_Deleted replacementInstances +
BlackBoxEvent edited +
OtherEntity edited +
DefinedSet edited +
Pathway edited +
SimpleEntity edited +
Cell edited +
EntitySet edited +
ProteinDrug edited +
CellDevelopmentStep edited +
ReactionlikeEvent edited +
Polymer edited +
Complex edited +
Drug edited +
CandidateSet edited +
CellLineagePath edited +
ChemicalDrug edited +
Depolymerisation edited +
Polymerisation edited +
PhysicalEntity edited +
FailedReaction edited +
Event edited +
InteractionEvent edited +
RNADrug edited +
Reaction edited +
GenomeEncodedEntity edited +
EntityWithAccessionedSequence edited +
InteractionEvent internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep reviewed +
Polymer reviewed +
ReactionlikeEvent reviewed +
Complex reviewed +
Drug reviewed +
CandidateSet reviewed +
BlackBoxEvent reviewed +
OtherEntity reviewed +
DefinedSet reviewed +
Pathway reviewed +
SimpleEntity reviewed +
Cell reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
PhysicalEntity reviewed +
Polymerisation reviewed +
FailedReaction reviewed +
Event reviewed +
RNADrug reviewed +
InteractionEvent reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
GenomeEncodedEntity reviewed +
CellLineagePath reviewed +
ChemicalDrug reviewed +
Depolymerisation reviewed +
Depolymerisation structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Pathway structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
StableIdentifierReleaseStatus created 1
InstanceEdit created 1
Depolymerisation created 1
Affiliation created 1
ChemicalDrug created 1
PathwayDiagram created 1
ReferenceTherapeutic created 1
Taxon created 1
EntityWithAccessionedSequence created 1
NegativeGeneExpressionRegulation created 1
FailedReaction created 1
ReferenceIsoform created 1
Event created 1
ProteinDrug created 1
EntitySet created 1
Book created 1
ReferenceDNASequence created 1
_UpdateTracker created 1
Drug created 1
Summation created 1
DatabaseObject created 1
Complex created 1
NonsenseMutation created 1
FunctionalStatus created 1
SequenceOntology created 1
ReactionType created 1
ControlledVocabulary created 1
TranscriptionalModification created 1
RegulationReference created 1
CellLineagePath created 1
PositiveGeneExpressionRegulation created 1
EvidenceType created 1
ReferenceMolecule created 1
InterChainCrosslinkedResidue created 1
GenomeEncodedEntity created 1
FragmentModification created 1
CatalystActivityReference created 1
Polymerisation created 1
GO_MolecularFunction created 1
ReviewStatus created 1
Cell created 1
OtherEntity created 1
_DeletedInstance created 1
Person created 1
StableIdentifierHistory created 1
ReferenceDatabase created 1
FrontPage created 1
NegativePrecedingEvent created 1
FragmentDeletionModification created 1
TranslationalModification created 1
NegativePrecedingEventReason created 1
ReactionlikeEvent created 1
PsiMod created 1
CellType created 1
ControlReference created 1
MarkerReference created 1
Regulation created 1
GroupModifiedResidue created 1
FragmentReplacedModification created 1
NegativeRegulation created 1
Species created 1
DrugActionType created 1
Disease created 1
DeletedControlledVocabulary created 1
CatalystActivity created 1
ReferenceSequence created 1
_Release created 1
ReferenceGroup created 1
Compartment created 1
AbstractModifiedResidue created 1
InteractionEvent created 1
DefinedSet created 1
Pathway created 1
SimpleEntity created 1
CandidateSet created 1
Publication created 1
_Deleted created 1
PhysicalEntityCellType created 1
GO_BiologicalProcess created 1
FunctionalStatusType created 1
ModifiedNucleotide created 1
DatabaseIdentifier created 1
PositiveRegulation created 1
RetractionStatus created 1
ReferenceRNASequence created 1
GO_CellularComponent created 1
FragmentInsertionModification created 1
EntityFunctionalStatus created 1
ReferenceEntity created 1
Anatomy created 1
Reaction created 1
PhysicalEntity created 1
ModifiedResidue created 1
RNADrug created 1
Requirement created 1
ReplacedResidue created 1
CrosslinkedResidue created 1
ReferenceGeneProduct created 1
URL created 1
BlackBoxEvent created 1
LiteratureReference created 1
ExternalOntology created 1
Polymer created 1
IntraChainCrosslinkedResidue created 1
GeneticallyModifiedResidue created 1
Figure created 1
CellDevelopmentStep created 1
StableIdentifier created 1
GO_BiologicalProcess modified +
PhysicalEntityCellType modified +
FunctionalStatusType modified +
CandidateSet modified +
_Deleted modified +
Publication modified +
Pathway modified +
SimpleEntity modified +
DefinedSet modified +
AbstractModifiedResidue modified +
InteractionEvent modified +
CatalystActivity modified +
DeletedControlledVocabulary modified +
Compartment modified +
ReferenceGroup modified +
_Release modified +
ReferenceSequence modified +
Disease modified +
FragmentReplacedModification modified +
DrugActionType modified +
Species modified +
NegativeRegulation modified +
IntraChainCrosslinkedResidue modified +
Polymer modified +
Figure modified +
StableIdentifier modified +
CellDevelopmentStep modified +
GeneticallyModifiedResidue modified +
ExternalOntology modified +
BlackBoxEvent modified +
URL modified +
LiteratureReference modified +
Requirement modified +
ReplacedResidue modified +
ReferenceGeneProduct modified +
CrosslinkedResidue modified +
Anatomy modified +
ReferenceEntity modified +
Reaction modified +
RNADrug modified +
PhysicalEntity modified +
ModifiedResidue modified +
ReferenceRNASequence modified +
RetractionStatus modified +
EntityFunctionalStatus modified +
FragmentInsertionModification modified +
GO_CellularComponent modified +
PositiveRegulation modified +
DatabaseIdentifier modified +
ModifiedNucleotide modified +
SequenceOntology modified +
FunctionalStatus modified +
Summation modified +
_UpdateTracker modified +
Drug modified +
Complex modified +
DatabaseObject modified +
NonsenseMutation modified +
ReferenceDNASequence modified +
Book modified +
ProteinDrug modified +
EntitySet modified +
NegativeGeneExpressionRegulation modified +
Event modified +
FailedReaction modified +
ReferenceIsoform modified +
EntityWithAccessionedSequence modified +
Taxon modified +
ChemicalDrug modified +
PathwayDiagram modified +
ReferenceTherapeutic modified +
StableIdentifierReleaseStatus modified +
InstanceEdit modified +
Affiliation modified +
Depolymerisation modified +
CellType modified +
PsiMod modified +
ReactionlikeEvent modified +
GroupModifiedResidue modified +
ControlReference modified +
MarkerReference modified +
Regulation modified +
NegativePrecedingEvent modified +
NegativePrecedingEventReason modified +
TranslationalModification modified +
FragmentDeletionModification modified +
Person modified +
OtherEntity modified +
_DeletedInstance modified +
FrontPage modified +
ReferenceDatabase modified +
StableIdentifierHistory modified +
ReviewStatus modified +
Cell modified +
GO_MolecularFunction modified +
CatalystActivityReference modified +
FragmentModification modified +
Polymerisation modified +
EvidenceType modified +
ReferenceMolecule modified +
PositiveGeneExpressionRegulation modified +
GenomeEncodedEntity modified +
InterChainCrosslinkedResidue modified +
TranscriptionalModification modified +
ControlledVocabulary modified +
RegulationReference modified +
CellLineagePath modified +
ReactionType modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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