Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
PositiveGeneExpressionRegulation modified +
OtherEntity modified +
Polymer modified +
TranslationalModification modified +
ReferenceGroup modified +
CatalystActivityReference modified +
NegativePrecedingEvent modified +
Depolymerisation modified +
GeneticallyModifiedResidue modified +
BlackBoxEvent modified +
ReferenceIsoform modified +
_Deleted modified +
FragmentModification modified +
ExternalOntology modified +
GenomeEncodedEntity modified +
InstanceEdit modified +
ReplacedResidue modified +
Person modified +
ReferenceDNASequence modified +
FrontPage modified +
ProteinDrug modified +
RNADrug modified +
DrugActionType modified +
ModifiedNucleotide modified +
ReferenceDatabase modified +
_UpdateTracker modified +
CellDevelopmentStep modified +
FragmentInsertionModification modified +
Book modified +
ReferenceSequence modified +
CrosslinkedResidue modified +
FragmentDeletionModification modified +
Regulation modified +
GO_BiologicalProcess modified +
EntityWithAccessionedSequence modified +
StableIdentifier modified +
IntraChainCrosslinkedResidue modified +
FunctionalStatusType modified +
RegulationReference modified +
DatabaseIdentifier modified +
ReferenceMolecule modified +
StableIdentifierReleaseStatus modified +
Reaction modified +
InterChainCrosslinkedResidue modified +
MarkerReference modified +
PhysicalEntityCellType modified +
PathwayDiagram modified +
ModifiedResidue modified +
Compartment modified +
Complex modified +
Species modified +
StableIdentifierHistory modified +
PositiveRegulation modified +
ReferenceGeneProduct modified +
NegativeRegulation modified +
DatabaseObject modified +
Figure modified +
GroupModifiedResidue modified +
Event modified +
DeletedControlledVocabulary modified +
ReferenceEntity modified +
Cell modified +
ChemicalDrug modified +
ControlReference modified +
GO_MolecularFunction modified +
DefinedSet modified +
PhysicalEntity modified +
InteractionEvent modified +
AbstractModifiedResidue modified +
Taxon modified +
SimpleEntity modified +
_DeletedInstance modified +
FragmentReplacedModification modified +
GO_CellularComponent modified +
EntitySet modified +
Polymerisation modified +
FailedReaction modified +
ReactionlikeEvent modified +
NonsenseMutation modified +
SequenceOntology modified +
Affiliation modified +
RetractionStatus modified +
FunctionalStatus modified +
ControlledVocabulary modified +
CandidateSet modified +
CellType modified +
ReactionType modified +
Drug modified +
ReferenceRNASequence modified +
Publication modified +
Summation modified +
PsiMod modified +
NegativeGeneExpressionRegulation modified +
NegativePrecedingEventReason modified +
Disease modified +
Pathway modified +
CellLineagePath modified +
LiteratureReference modified +
URL modified +
Requirement modified +
ReferenceTherapeutic modified +
_Release modified +
EvidenceType modified +
Anatomy modified +
TranscriptionalModification modified +
ReviewStatus modified +
EntityFunctionalStatus modified +
CatalystActivity modified +
AbstractModifiedResidue created 1
Taxon created 1
SimpleEntity created 1
_DeletedInstance created 1
FragmentReplacedModification created 1
GO_CellularComponent created 1
EntitySet created 1
FailedReaction created 1
Polymerisation created 1
ReactionlikeEvent created 1
NonsenseMutation created 1
Affiliation created 1
SequenceOntology created 1
ReferenceGeneProduct created 1
NegativeRegulation created 1
DatabaseObject created 1
Figure created 1
GroupModifiedResidue created 1
Event created 1
ReferenceEntity created 1
DeletedControlledVocabulary created 1
ChemicalDrug created 1
Cell created 1
GO_MolecularFunction created 1
ControlReference created 1
DefinedSet created 1
PhysicalEntity created 1
InteractionEvent created 1
NegativeGeneExpressionRegulation created 1
NegativePrecedingEventReason created 1
Disease created 1
Pathway created 1
CellLineagePath created 1
LiteratureReference created 1
URL created 1
Requirement created 1
ReferenceTherapeutic created 1
EvidenceType created 1
Anatomy created 1
_Release created 1
TranscriptionalModification created 1
ReviewStatus created 1
EntityFunctionalStatus created 1
CatalystActivity created 1
RetractionStatus created 1
FunctionalStatus created 1
ControlledVocabulary created 1
ReactionType created 1
CandidateSet created 1
CellType created 1
ReferenceRNASequence created 1
Drug created 1
Publication created 1
Summation created 1
PsiMod created 1
Person created 1
FrontPage created 1
ProteinDrug created 1
ReferenceDNASequence created 1
DrugActionType created 1
RNADrug created 1
ModifiedNucleotide created 1
ReferenceDatabase created 1
CellDevelopmentStep created 1
_UpdateTracker created 1
FragmentInsertionModification created 1
ReferenceSequence created 1
Book created 1
CrosslinkedResidue created 1
OtherEntity created 1
PositiveGeneExpressionRegulation created 1
TranslationalModification created 1
Polymer created 1
ReferenceGroup created 1
CatalystActivityReference created 1
Depolymerisation created 1
NegativePrecedingEvent created 1
GeneticallyModifiedResidue created 1
BlackBoxEvent created 1
ReferenceIsoform created 1
_Deleted created 1
FragmentModification created 1
ExternalOntology created 1
GenomeEncodedEntity created 1
InstanceEdit created 1
ReplacedResidue created 1
ReferenceMolecule created 1
StableIdentifierReleaseStatus created 1
Reaction created 1
MarkerReference created 1
InterChainCrosslinkedResidue created 1
PhysicalEntityCellType created 1
PathwayDiagram created 1
ModifiedResidue created 1
Complex created 1
Compartment created 1
Species created 1
StableIdentifierHistory created 1
PositiveRegulation created 1
FragmentDeletionModification created 1
Regulation created 1
GO_BiologicalProcess created 1
StableIdentifier created 1
EntityWithAccessionedSequence created 1
IntraChainCrosslinkedResidue created 1
RegulationReference created 1
FunctionalStatusType created 1
DatabaseIdentifier created 1
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Event structureModified +
Reaction structureModified +
Depolymerisation structureModified +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
Complex edited +
ReactionlikeEvent edited +
CellDevelopmentStep edited +
EntitySet edited +
Polymerisation edited +
FailedReaction edited +
RNADrug edited +
Reaction edited +
SimpleEntity edited +
CellLineagePath edited +
Pathway edited +
ProteinDrug edited +
InteractionEvent edited +
DefinedSet edited +
PhysicalEntity edited +
ChemicalDrug edited +
BlackBoxEvent edited +
Cell edited +
GenomeEncodedEntity edited +
Depolymerisation edited +
Drug edited +
Event edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
Polymer edited +
OtherEntity edited +
GenomeEncodedEntity revised +
Cell revised +
BlackBoxEvent revised +
ChemicalDrug revised +
PhysicalEntity revised +
DefinedSet revised +
InteractionEvent revised +
OtherEntity revised +
Polymer revised +
EntityWithAccessionedSequence revised +
CandidateSet revised +
Drug revised +
Event revised +
Depolymerisation revised +
FailedReaction revised +
Polymerisation revised +
EntitySet revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
Complex revised +
ProteinDrug revised +
Pathway revised +
CellLineagePath revised +
SimpleEntity revised +
Reaction revised +
RNADrug revised +
ReactionlikeEvent authored +
Complex authored 1
EntitySet authored 1
FailedReaction authored +
Polymerisation authored +
CellDevelopmentStep authored +
SimpleEntity authored 1
Pathway authored +
CellLineagePath authored +
RNADrug authored 1
Reaction authored +
ProteinDrug authored 1
InteractionEvent authored +
BlackBoxEvent authored +
Cell authored 1
ChemicalDrug authored 1
GenomeEncodedEntity authored 1
DefinedSet authored 1
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
Depolymerisation authored +
Event authored +
Drug authored 1
OtherEntity authored 1
Polymer authored 1
Complex reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
EntitySet reviewed +
FailedReaction reviewed +
Polymerisation reviewed +
RNADrug reviewed +
Reaction reviewed +
SimpleEntity reviewed +
CellLineagePath reviewed +
Pathway reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
DefinedSet reviewed +
PhysicalEntity reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
Cell reviewed +
GenomeEncodedEntity reviewed +
Depolymerisation reviewed +
Drug reviewed +
Event reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
Polymer reviewed +
OtherEntity reviewed +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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