Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InteractionEvent revised +
DefinedSet revised +
PhysicalEntity revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
Event revised +
EntitySet revised +
CellDevelopmentStep revised +
EntityWithAccessionedSequence revised +
Depolymerisation revised +
CandidateSet revised +
FailedReaction revised +
ChemicalDrug revised +
Pathway revised +
Polymerisation revised +
Reaction revised +
ProteinDrug revised +
OtherEntity revised +
BlackBoxEvent revised +
Cell revised +
CellLineagePath revised +
ReactionlikeEvent revised +
Polymer revised +
RNADrug revised +
Drug revised +
Complex revised +
OtherEntity authored 1
ProteinDrug authored 1
Reaction authored +
Polymerisation authored +
Pathway authored +
FailedReaction authored +
ChemicalDrug authored 1
Drug authored 1
RNADrug authored 1
Complex authored 1
Polymer authored 1
ReactionlikeEvent authored +
CellLineagePath authored +
Cell authored 1
BlackBoxEvent authored +
GenomeEncodedEntity authored 1
PhysicalEntity authored 1
DefinedSet authored 1
InteractionEvent authored +
CandidateSet authored 1
Depolymerisation authored +
EntityWithAccessionedSequence authored 1
CellDevelopmentStep authored +
EntitySet authored 1
Event authored +
SimpleEntity authored 1
Reaction structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
Pathway structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Event structureModified +
ReferenceGeneProduct created 1
NegativeGeneExpressionRegulation created 1
GO_MolecularFunction created 1
DeletedControlledVocabulary created 1
Book created 1
NegativeRegulation created 1
FunctionalStatusType created 1
FunctionalStatus created 1
CandidateSet created 1
ControlledVocabulary created 1
Regulation created 1
GroupModifiedResidue created 1
FragmentInsertionModification created 1
_Release created 1
SimpleEntity created 1
OtherEntity created 1
DatabaseObject created 1
Publication created 1
StableIdentifierHistory created 1
PathwayDiagram created 1
Polymerisation created 1
InterChainCrosslinkedResidue created 1
DatabaseIdentifier created 1
IntraChainCrosslinkedResidue created 1
Drug created 1
Complex created 1
EvidenceType created 1
PositiveGeneExpressionRegulation created 1
Affiliation created 1
GenomeEncodedEntity created 1
PhysicalEntity created 1
DefinedSet created 1
FragmentDeletionModification created 1
URL created 1
PositiveRegulation created 1
Compartment created 1
_UpdateTracker created 1
Event created 1
ProteinDrug created 1
SequenceOntology created 1
_Deleted created 1
CrosslinkedResidue created 1
Reaction created 1
CatalystActivityReference created 1
PsiMod created 1
AbstractModifiedResidue created 1
FailedReaction created 1
ChemicalDrug created 1
PhysicalEntityCellType created 1
ReferenceMolecule created 1
TranscriptionalModification created 1
ReferenceDatabase created 1
Species created 1
ReferenceRNASequence created 1
CellType created 1
ReactionlikeEvent created 1
ExternalOntology created 1
BlackBoxEvent created 1
Taxon created 1
ReviewStatus created 1
FragmentReplacedModification created 1
ControlReference created 1
_DeletedInstance created 1
EntityWithAccessionedSequence created 1
EntitySet created 1
TranslationalModification created 1
NegativePrecedingEvent created 1
Requirement created 1
Person created 1
NonsenseMutation created 1
GO_CellularComponent created 1
ReplacedResidue created 1
ReferenceIsoform created 1
GO_BiologicalProcess created 1
ReferenceEntity created 1
Polymer created 1
RetractionStatus created 1
ReferenceTherapeutic created 1
CellLineagePath created 1
NegativePrecedingEventReason created 1
GeneticallyModifiedResidue created 1
ModifiedNucleotide created 1
Figure created 1
InteractionEvent created 1
Disease created 1
StableIdentifierReleaseStatus created 1
Depolymerisation created 1
InstanceEdit created 1
ReactionType created 1
FrontPage created 1
ReferenceGroup created 1
CellDevelopmentStep created 1
DrugActionType created 1
Summation created 1
FragmentModification created 1
StableIdentifier created 1
ModifiedResidue created 1
Pathway created 1
RegulationReference created 1
CatalystActivity created 1
ReferenceSequence created 1
LiteratureReference created 1
EntityFunctionalStatus created 1
MarkerReference created 1
ReferenceDNASequence created 1
RNADrug created 1
Anatomy created 1
Cell created 1
_Deleted replacementInstances +
Polymer edited +
ReactionlikeEvent edited +
CellLineagePath edited +
Cell edited +
BlackBoxEvent edited +
Drug edited +
RNADrug edited +
Complex edited +
Polymerisation edited +
Pathway edited +
ChemicalDrug edited +
FailedReaction edited +
OtherEntity edited +
ProteinDrug edited +
Reaction edited +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
EntitySet edited +
SimpleEntity edited +
Event edited +
CandidateSet edited +
Depolymerisation edited +
InteractionEvent edited +
GenomeEncodedEntity edited +
PhysicalEntity edited +
DefinedSet edited +
PositiveGeneExpressionRegulation modified +
IntraChainCrosslinkedResidue modified +
DatabaseIdentifier modified +
Drug modified +
Complex modified +
EvidenceType modified +
Polymerisation modified +
InterChainCrosslinkedResidue modified +
OtherEntity modified +
DatabaseObject modified +
Publication modified +
PathwayDiagram modified +
StableIdentifierHistory modified +
GroupModifiedResidue modified +
FragmentInsertionModification modified +
SimpleEntity modified +
_Release modified +
CandidateSet modified +
FunctionalStatus modified +
ControlledVocabulary modified +
Regulation modified +
NegativeRegulation modified +
FunctionalStatusType modified +
ReferenceGeneProduct modified +
NegativeGeneExpressionRegulation modified +
GO_MolecularFunction modified +
DeletedControlledVocabulary modified +
Book modified +
ReferenceRNASequence modified +
CellType modified +
ReactionlikeEvent modified +
ExternalOntology modified +
BlackBoxEvent modified +
PhysicalEntityCellType modified +
TranscriptionalModification modified +
ReferenceMolecule modified +
Species modified +
ReferenceDatabase modified +
CatalystActivityReference modified +
PsiMod modified +
FailedReaction modified +
ChemicalDrug modified +
AbstractModifiedResidue modified +
SequenceOntology modified +
ProteinDrug modified +
Reaction modified +
_Deleted modified +
CrosslinkedResidue modified +
PositiveRegulation modified +
Compartment modified +
_UpdateTracker modified +
Event modified +
URL modified +
Affiliation modified +
GenomeEncodedEntity modified +
PhysicalEntity modified +
FragmentDeletionModification modified +
DefinedSet modified +
ReferenceEntity modified +
GO_BiologicalProcess modified +
Polymer modified +
ReferenceTherapeutic modified +
RetractionStatus modified +
CellLineagePath modified +
ReplacedResidue modified +
ReferenceIsoform modified +
Requirement modified +
Person modified +
NonsenseMutation modified +
GO_CellularComponent modified +
NegativePrecedingEvent modified +
ControlReference modified +
EntityWithAccessionedSequence modified +
_DeletedInstance modified +
EntitySet modified +
TranslationalModification modified +
FragmentReplacedModification modified +
Taxon modified +
ReviewStatus modified +
Anatomy modified +
Cell modified +
ReferenceSequence modified +
LiteratureReference modified +
EntityFunctionalStatus modified +
MarkerReference modified +
ReferenceDNASequence modified +
RNADrug modified +
RegulationReference modified +
Pathway modified +
CatalystActivity modified +
Summation modified +
FragmentModification modified +
StableIdentifier modified +
ModifiedResidue modified +
FrontPage modified +
ReferenceGroup modified +
CellDevelopmentStep modified +
DrugActionType modified +
StableIdentifierReleaseStatus modified +
InstanceEdit modified +
Depolymerisation modified +
ReactionType modified +
Figure modified +
InteractionEvent modified +
Disease modified +
NegativePrecedingEventReason modified +
GeneticallyModifiedResidue modified +
ModifiedNucleotide modified +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
DefinedSet reviewed +
PhysicalEntity reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
Depolymerisation reviewed +
CandidateSet reviewed +
SimpleEntity reviewed +
Event reviewed +
EntitySet reviewed +
CellDevelopmentStep reviewed +
EntityWithAccessionedSequence reviewed +
Reaction reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
Pathway reviewed +
Polymerisation reviewed +
Drug reviewed +
RNADrug reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
Cell reviewed +
CellLineagePath reviewed +
ReactionlikeEvent reviewed +
Polymer reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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