Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
FailedReaction reviewed +
DefinedSet reviewed +
OtherEntity reviewed +
Depolymerisation reviewed +
Polymer reviewed +
Event reviewed +
Pathway reviewed +
Cell reviewed +
EntitySet reviewed +
BlackBoxEvent reviewed +
Drug reviewed +
PhysicalEntity reviewed +
RNADrug reviewed +
Complex reviewed +
Polymerisation reviewed +
SimpleEntity reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
EntityWithAccessionedSequence reviewed +
Reaction reviewed +
InteractionEvent reviewed +
CandidateSet reviewed +
CellDevelopmentStep reviewed +
GenomeEncodedEntity reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
Pathway edited +
Event edited +
Polymer edited +
Drug edited +
BlackBoxEvent edited +
Cell edited +
EntitySet edited +
DefinedSet edited +
FailedReaction edited +
Depolymerisation edited +
OtherEntity edited +
Reaction edited +
InteractionEvent edited +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
CellLineagePath edited +
GenomeEncodedEntity edited +
ProteinDrug edited +
CellDevelopmentStep edited +
CandidateSet edited +
Polymerisation edited +
Complex edited +
RNADrug edited +
PhysicalEntity edited +
SimpleEntity edited +
ChemicalDrug edited +
InteractionEvent internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
CandidateSet authored 1
CellDevelopmentStep authored +
GenomeEncodedEntity authored 1
ProteinDrug authored 1
CellLineagePath authored +
ReactionlikeEvent authored +
EntityWithAccessionedSequence authored 1
InteractionEvent authored +
Reaction authored +
SimpleEntity authored 1
ChemicalDrug authored 1
PhysicalEntity authored 1
RNADrug authored 1
Complex authored 1
Polymerisation authored +
Cell authored 1
EntitySet authored 1
BlackBoxEvent authored +
Drug authored 1
Polymer authored 1
Event authored +
Pathway authored +
OtherEntity authored 1
Depolymerisation authored +
FailedReaction authored +
DefinedSet authored 1
EntityWithAccessionedSequence revised +
InteractionEvent revised +
Reaction revised +
ReactionlikeEvent revised +
CellLineagePath revised +
CellDevelopmentStep revised +
CandidateSet revised +
GenomeEncodedEntity revised +
ProteinDrug revised +
RNADrug revised +
Complex revised +
Polymerisation revised +
PhysicalEntity revised +
SimpleEntity revised +
ChemicalDrug revised +
Pathway revised +
Polymer revised +
Event revised +
BlackBoxEvent revised +
Drug revised +
EntitySet revised +
Cell revised +
DefinedSet revised +
FailedReaction revised +
Depolymerisation revised +
OtherEntity revised +
ReplacedResidue created 1
LiteratureReference created 1
GO_MolecularFunction created 1
ExternalOntology created 1
GroupModifiedResidue created 1
DefinedSet created 1
Taxon created 1
StableIdentifierHistory created 1
EntitySet created 1
URL created 1
Drug created 1
ReferenceEntity created 1
ReferenceSequence created 1
DrugActionType created 1
Event created 1
FragmentReplacedModification created 1
Affiliation created 1
Requirement created 1
PhysicalEntity created 1
RetractionStatus created 1
PhysicalEntityCellType created 1
FragmentModification created 1
EvidenceType created 1
CellDevelopmentStep created 1
GO_CellularComponent created 1
ControlReference created 1
_UpdateTracker created 1
MarkerReference created 1
ControlledVocabulary created 1
InteractionEvent created 1
Publication created 1
Depolymerisation created 1
DeletedControlledVocabulary created 1
RegulationReference created 1
DatabaseObject created 1
Person created 1
StableIdentifier created 1
FunctionalStatusType created 1
BlackBoxEvent created 1
FragmentInsertionModification created 1
Polymer created 1
IntraChainCrosslinkedResidue created 1
Disease created 1
PositiveRegulation created 1
GenomeEncodedEntity created 1
ReferenceDNASequence created 1
StableIdentifierReleaseStatus created 1
CellLineagePath created 1
ReactionlikeEvent created 1
SequenceOntology created 1
Compartment created 1
ReferenceDatabase created 1
EntityWithAccessionedSequence created 1
OtherEntity created 1
ReferenceMolecule created 1
_DeletedInstance created 1
Cell created 1
NegativePrecedingEventReason created 1
GeneticallyModifiedResidue created 1
FrontPage created 1
_Deleted created 1
EntityFunctionalStatus created 1
Pathway created 1
NonsenseMutation created 1
NegativePrecedingEvent created 1
CatalystActivity created 1
ReferenceRNASequence created 1
ChemicalDrug created 1
SimpleEntity created 1
Figure created 1
RNADrug created 1
ProteinDrug created 1
NegativeGeneExpressionRegulation created 1
NegativeRegulation created 1
InterChainCrosslinkedResidue created 1
InstanceEdit created 1
PathwayDiagram created 1
Reaction created 1
ReferenceGroup created 1
TranscriptionalModification created 1
Book created 1
FailedReaction created 1
Summation created 1
TranslationalModification created 1
DatabaseIdentifier created 1
FragmentDeletionModification created 1
PsiMod created 1
FunctionalStatus created 1
Regulation created 1
ModifiedNucleotide created 1
Species created 1
CatalystActivityReference created 1
GO_BiologicalProcess created 1
ReferenceIsoform created 1
ReferenceTherapeutic created 1
CellType created 1
ReactionType created 1
Anatomy created 1
ReviewStatus created 1
ModifiedResidue created 1
Polymerisation created 1
ReferenceGeneProduct created 1
PositiveGeneExpressionRegulation created 1
Complex created 1
CandidateSet created 1
AbstractModifiedResidue created 1
_Release created 1
CrosslinkedResidue created 1
GeneticallyModifiedResidue modified +
Cell modified +
NegativePrecedingEventReason modified +
Pathway modified +
EntityFunctionalStatus modified +
NonsenseMutation modified +
_Deleted modified +
FrontPage modified +
_DeletedInstance modified +
ReferenceMolecule modified +
OtherEntity modified +
NegativeRegulation modified +
InterChainCrosslinkedResidue modified +
ProteinDrug modified +
NegativeGeneExpressionRegulation modified +
Reaction modified +
PathwayDiagram modified +
InstanceEdit modified +
SimpleEntity modified +
ChemicalDrug modified +
NegativePrecedingEvent modified +
CatalystActivity modified +
ReferenceRNASequence modified +
RNADrug modified +
Figure modified +
Regulation modified +
ModifiedNucleotide modified +
Species modified +
PsiMod modified +
FunctionalStatus modified +
CatalystActivityReference modified +
TranscriptionalModification modified +
ReferenceGroup modified +
Summation modified +
FragmentDeletionModification modified +
DatabaseIdentifier modified +
TranslationalModification modified +
Book modified +
FailedReaction modified +
CandidateSet modified +
AbstractModifiedResidue modified +
_Release modified +
CrosslinkedResidue modified +
CellType modified +
ReactionType modified +
Anatomy modified +
GO_BiologicalProcess modified +
ReferenceIsoform modified +
ReferenceTherapeutic modified +
Polymerisation modified +
ReferenceGeneProduct modified +
Complex modified +
PositiveGeneExpressionRegulation modified +
ReviewStatus modified +
ModifiedResidue modified +
ReferenceEntity modified +
ReferenceSequence modified +
Drug modified +
StableIdentifierHistory modified +
EntitySet modified +
URL modified +
DrugActionType modified +
Event modified +
GO_MolecularFunction modified +
ExternalOntology modified +
ReplacedResidue modified +
LiteratureReference modified +
DefinedSet modified +
Taxon modified +
GroupModifiedResidue modified +
GO_CellularComponent modified +
ControlReference modified +
CellDevelopmentStep modified +
InteractionEvent modified +
Publication modified +
_UpdateTracker modified +
MarkerReference modified +
ControlledVocabulary modified +
Affiliation modified +
Requirement modified +
FragmentReplacedModification modified +
RetractionStatus modified +
FragmentModification modified +
PhysicalEntityCellType modified +
EvidenceType modified +
PhysicalEntity modified +
FunctionalStatusType modified +
BlackBoxEvent modified +
StableIdentifier modified +
FragmentInsertionModification modified +
Polymer modified +
Depolymerisation modified +
RegulationReference modified +
DeletedControlledVocabulary modified +
Person modified +
DatabaseObject modified +
ReferenceDNASequence modified +
StableIdentifierReleaseStatus modified +
CellLineagePath modified +
GenomeEncodedEntity modified +
ReferenceDatabase modified +
EntityWithAccessionedSequence modified +
Compartment modified +
ReactionlikeEvent modified +
SequenceOntology modified +
Disease modified +
PositiveRegulation modified +
IntraChainCrosslinkedResidue modified +
Depolymerisation structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
Pathway structureModified +
InteractionEvent structureModified +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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