Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InteractionEvent structureModified +
Event structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Pathway structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
Complex reviewed +
Event reviewed +
EntityWithAccessionedSequence reviewed +
InteractionEvent reviewed +
Reaction reviewed +
ProteinDrug reviewed +
Depolymerisation reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
ReactionlikeEvent reviewed +
Pathway reviewed +
EntitySet reviewed +
ChemicalDrug reviewed +
RNADrug reviewed +
Drug reviewed +
CellLineagePath reviewed +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
CellDevelopmentStep reviewed +
Polymer reviewed +
PhysicalEntity reviewed +
SimpleEntity reviewed +
Cell reviewed +
Polymerisation reviewed +
FailedReaction reviewed +
BlackBoxEvent reviewed +
BlackBoxEvent authored +
SimpleEntity authored 1
Cell authored 1
FailedReaction authored +
Polymerisation authored +
PhysicalEntity authored 1
GenomeEncodedEntity authored 1
OtherEntity authored 1
Polymer authored 1
CellDevelopmentStep authored +
Drug authored 1
CellLineagePath authored +
Depolymerisation authored +
CandidateSet authored 1
DefinedSet authored 1
Pathway authored +
RNADrug authored 1
ChemicalDrug authored 1
EntitySet authored 1
ReactionlikeEvent authored +
InteractionEvent authored +
Event authored +
EntityWithAccessionedSequence authored 1
Reaction authored +
ProteinDrug authored 1
Complex authored 1
_Deleted replacementInstances +
BlackBoxEvent edited +
SimpleEntity edited +
Cell edited +
Polymerisation edited +
FailedReaction edited +
PhysicalEntity edited +
GenomeEncodedEntity edited +
OtherEntity edited +
Polymer edited +
CellDevelopmentStep edited +
Drug edited +
CellLineagePath edited +
Depolymerisation edited +
CandidateSet edited +
DefinedSet edited +
Pathway edited +
RNADrug edited +
ChemicalDrug edited +
EntitySet edited +
ReactionlikeEvent edited +
Event edited +
EntityWithAccessionedSequence edited +
InteractionEvent edited +
Reaction edited +
ProteinDrug edited +
Complex edited +
ControlReference created 1
FailedReaction created 1
FunctionalStatusType created 1
SimpleEntity created 1
_Release created 1
Polymer created 1
CellType created 1
URL created 1
PhysicalEntity created 1
Regulation created 1
LiteratureReference created 1
Pathway created 1
NonsenseMutation created 1
EntityFunctionalStatus created 1
DrugActionType created 1
Drug created 1
EvidenceType created 1
Publication created 1
ControlledVocabulary created 1
ReactionType created 1
PositiveGeneExpressionRegulation created 1
FrontPage created 1
TranslationalModification created 1
Complex created 1
ProteinDrug created 1
Event created 1
ModifiedResidue created 1
Reaction created 1
PsiMod created 1
ReferenceSequence created 1
NegativeRegulation created 1
AbstractModifiedResidue created 1
FunctionalStatus created 1
RegulationReference created 1
GenomeEncodedEntity created 1
OtherEntity created 1
StableIdentifierReleaseStatus created 1
TranscriptionalModification created 1
NegativePrecedingEvent created 1
CatalystActivityReference created 1
FragmentReplacedModification created 1
IntraChainCrosslinkedResidue created 1
ReviewStatus created 1
EntitySet created 1
ReferenceRNASequence created 1
Depolymerisation created 1
ReferenceMolecule created 1
Taxon created 1
_UpdateTracker created 1
Affiliation created 1
Compartment created 1
NegativeGeneExpressionRegulation created 1
Anatomy created 1
PathwayDiagram created 1
MarkerReference created 1
InstanceEdit created 1
InteractionEvent created 1
ReferenceDatabase created 1
RetractionStatus created 1
Polymerisation created 1
Person created 1
Cell created 1
_Deleted created 1
StableIdentifier created 1
StableIdentifierHistory created 1
FragmentInsertionModification created 1
BlackBoxEvent created 1
PositiveRegulation created 1
_DeletedInstance created 1
ChemicalDrug created 1
ReactionlikeEvent created 1
Disease created 1
GO_MolecularFunction created 1
ExternalOntology created 1
CellLineagePath created 1
ReferenceIsoform created 1
NegativePrecedingEventReason created 1
CrosslinkedResidue created 1
FragmentModification created 1
FragmentDeletionModification created 1
Book created 1
GO_CellularComponent created 1
ReferenceTherapeutic created 1
SequenceOntology created 1
ReferenceDNASequence created 1
InterChainCrosslinkedResidue created 1
ReferenceGeneProduct created 1
CatalystActivity created 1
DatabaseIdentifier created 1
ModifiedNucleotide created 1
Requirement created 1
CellDevelopmentStep created 1
PhysicalEntityCellType created 1
Figure created 1
Species created 1
ReferenceEntity created 1
Summation created 1
DefinedSet created 1
RNADrug created 1
GO_BiologicalProcess created 1
CandidateSet created 1
ReplacedResidue created 1
DeletedControlledVocabulary created 1
GeneticallyModifiedResidue created 1
GroupModifiedResidue created 1
ReferenceGroup created 1
DatabaseObject created 1
EntityWithAccessionedSequence created 1
GenomeEncodedEntity revised +
OtherEntity revised +
Polymer revised +
CellDevelopmentStep revised +
PhysicalEntity revised +
Cell revised +
SimpleEntity revised +
Polymerisation revised +
FailedReaction revised +
BlackBoxEvent revised +
Complex revised +
InteractionEvent revised +
Event revised +
EntityWithAccessionedSequence revised +
Reaction revised +
ProteinDrug revised +
Depolymerisation revised +
CandidateSet revised +
DefinedSet revised +
ChemicalDrug revised +
Pathway revised +
ReactionlikeEvent revised +
EntitySet revised +
RNADrug revised +
Drug revised +
CellLineagePath revised +
Drug modified +
EntityFunctionalStatus modified +
DrugActionType modified +
NonsenseMutation modified +
LiteratureReference modified +
Pathway modified +
Event modified +
ModifiedResidue modified +
Reaction modified +
ProteinDrug modified +
PositiveGeneExpressionRegulation modified +
Complex modified +
FrontPage modified +
TranslationalModification modified +
EvidenceType modified +
Publication modified +
ControlledVocabulary modified +
ReactionType modified +
_Release modified +
SimpleEntity modified +
ControlReference modified +
FunctionalStatusType modified +
FailedReaction modified +
PhysicalEntity modified +
Regulation modified +
URL modified +
CellType modified +
Polymer modified +
Taxon modified +
Compartment modified +
_UpdateTracker modified +
Affiliation modified +
ReferenceMolecule modified +
ReferenceRNASequence modified +
Depolymerisation modified +
EntitySet modified +
ReviewStatus modified +
InteractionEvent modified +
ReferenceDatabase modified +
PathwayDiagram modified +
MarkerReference modified +
InstanceEdit modified +
Anatomy modified +
NegativeGeneExpressionRegulation modified +
AbstractModifiedResidue modified +
FunctionalStatus modified +
PsiMod modified +
ReferenceSequence modified +
NegativeRegulation modified +
CatalystActivityReference modified +
FragmentReplacedModification modified +
IntraChainCrosslinkedResidue modified +
NegativePrecedingEvent modified +
TranscriptionalModification modified +
RegulationReference modified +
GenomeEncodedEntity modified +
OtherEntity modified +
StableIdentifierReleaseStatus modified +
ReferenceIsoform modified +
NegativePrecedingEventReason modified +
FragmentModification modified +
CrosslinkedResidue modified +
ExternalOntology modified +
CellLineagePath modified +
Disease modified +
GO_MolecularFunction modified +
ChemicalDrug modified +
ReactionlikeEvent modified +
SequenceOntology modified +
InterChainCrosslinkedResidue modified +
ReferenceDNASequence modified +
Book modified +
GO_CellularComponent modified +
ReferenceTherapeutic modified +
FragmentDeletionModification modified +
BlackBoxEvent modified +
StableIdentifierHistory modified +
FragmentInsertionModification modified +
Person modified +
_Deleted modified +
Cell modified +
StableIdentifier modified +
RetractionStatus modified +
Polymerisation modified +
_DeletedInstance modified +
PositiveRegulation modified +
GO_BiologicalProcess modified +
CandidateSet modified +
DefinedSet modified +
RNADrug modified +
EntityWithAccessionedSequence modified +
ReferenceGroup modified +
GroupModifiedResidue modified +
DatabaseObject modified +
GeneticallyModifiedResidue modified +
ReplacedResidue modified +
DeletedControlledVocabulary modified +
ModifiedNucleotide modified +
Requirement modified +
DatabaseIdentifier modified +
ReferenceGeneProduct modified +
CatalystActivity modified +
Summation modified +
ReferenceEntity modified +
Species modified +
Figure modified +
PhysicalEntityCellType modified +
CellDevelopmentStep modified +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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