Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent authored +
PhysicalEntity authored 1
Depolymerisation authored +
Polymer authored 1
InteractionEvent authored +
EntityWithAccessionedSequence authored 1
EntitySet authored 1
Drug authored 1
SimpleEntity authored 1
Reaction authored +
Complex authored 1
DefinedSet authored 1
Polymerisation authored +
CellDevelopmentStep authored +
Cell authored 1
CellLineagePath authored +
Event authored +
OtherEntity authored 1
ProteinDrug authored 1
BlackBoxEvent authored +
FailedReaction authored +
Pathway authored +
RNADrug authored 1
CandidateSet authored 1
GenomeEncodedEntity authored 1
ChemicalDrug authored 1
InteractionEvent edited +
Polymer edited +
PhysicalEntity edited +
Depolymerisation edited +
ReactionlikeEvent edited +
EntityWithAccessionedSequence edited +
EntitySet edited +
SimpleEntity edited +
Drug edited +
Cell edited +
Polymerisation edited +
CellDevelopmentStep edited +
DefinedSet edited +
Complex edited +
Reaction edited +
Event edited +
OtherEntity edited +
CellLineagePath edited +
BlackBoxEvent edited +
ProteinDrug edited +
CandidateSet edited +
RNADrug edited +
Pathway edited +
FailedReaction edited +
ChemicalDrug edited +
GenomeEncodedEntity edited +
Drug revised +
SimpleEntity revised +
Complex revised +
DefinedSet revised +
Reaction revised +
Cell revised +
Polymerisation revised +
CellDevelopmentStep revised +
PhysicalEntity revised +
Depolymerisation revised +
ReactionlikeEvent revised +
Polymer revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
FailedReaction revised +
CandidateSet revised +
RNADrug revised +
Pathway revised +
GenomeEncodedEntity revised +
ChemicalDrug revised +
CellLineagePath revised +
OtherEntity revised +
Event revised +
BlackBoxEvent revised +
ProteinDrug revised +
_Deleted replacementInstances +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
ChemicalDrug reviewed +
GenomeEncodedEntity reviewed +
RNADrug reviewed +
CandidateSet reviewed +
Pathway reviewed +
FailedReaction reviewed +
BlackBoxEvent reviewed +
ProteinDrug reviewed +
Event reviewed +
OtherEntity reviewed +
CellLineagePath reviewed +
Cell reviewed +
CellDevelopmentStep reviewed +
Polymerisation reviewed +
Complex reviewed +
DefinedSet reviewed +
Reaction reviewed +
SimpleEntity reviewed +
Drug reviewed +
EntitySet reviewed +
EntityWithAccessionedSequence reviewed +
Polymer reviewed +
InteractionEvent reviewed +
Depolymerisation reviewed +
PhysicalEntity reviewed +
ReactionlikeEvent reviewed +
Polymer modified +
Anatomy modified +
ModifiedResidue modified +
ReactionlikeEvent modified +
ReplacedResidue modified +
_Deleted modified +
Regulation modified +
_DeletedInstance modified +
_Release modified +
DrugActionType modified +
ReferenceTherapeutic modified +
Publication modified +
Book modified +
SimpleEntity modified +
SequenceOntology modified +
Drug modified +
PositiveRegulation modified +
Reaction modified +
FragmentReplacedModification modified +
GO_MolecularFunction modified +
MarkerReference modified +
NegativeRegulation modified +
GeneticallyModifiedResidue modified +
FrontPage modified +
NegativePrecedingEventReason modified +
URL modified +
FragmentDeletionModification modified +
InteractionEvent modified +
ReferenceRNASequence modified +
RegulationReference modified +
ReferenceGeneProduct modified +
Depolymerisation modified +
EntityWithAccessionedSequence modified +
TranslationalModification modified +
EvidenceType modified +
ExternalOntology modified +
ControlledVocabulary modified +
CellDevelopmentStep modified +
GroupModifiedResidue modified +
PathwayDiagram modified +
EntityFunctionalStatus modified +
Event modified +
ReferenceSequence modified +
ReferenceEntity modified +
_UpdateTracker modified +
AbstractModifiedResidue modified +
Summation modified +
Person modified +
DatabaseIdentifier modified +
ModifiedNucleotide modified +
FailedReaction modified +
PsiMod modified +
ChemicalDrug modified +
InterChainCrosslinkedResidue modified +
CrosslinkedResidue modified +
ReferenceMolecule modified +
Disease modified +
LiteratureReference modified +
PhysicalEntity modified +
EntitySet modified +
IntraChainCrosslinkedResidue modified +
ReferenceDatabase modified +
ReviewStatus modified +
ReferenceDNASequence modified +
Polymerisation modified +
RetractionStatus modified +
Compartment modified +
Complex modified +
FunctionalStatus modified +
DefinedSet modified +
OtherEntity modified +
GO_BiologicalProcess modified +
GO_CellularComponent modified +
ProteinDrug modified +
StableIdentifierHistory modified +
NegativeGeneExpressionRegulation modified +
BlackBoxEvent modified +
Taxon modified +
ReferenceIsoform modified +
PhysicalEntityCellType modified +
Pathway modified +
CandidateSet modified +
StableIdentifier modified +
RNADrug modified +
CatalystActivity modified +
CellType modified +
GenomeEncodedEntity modified +
Figure modified +
Requirement modified +
NonsenseMutation modified +
PositiveGeneExpressionRegulation modified +
FragmentInsertionModification modified +
FragmentModification modified +
DeletedControlledVocabulary modified +
CatalystActivityReference modified +
DatabaseObject modified +
ReactionType modified +
Cell modified +
StableIdentifierReleaseStatus modified +
ControlReference modified +
CellLineagePath modified +
ReferenceGroup modified +
Species modified +
TranscriptionalModification modified +
FunctionalStatusType modified +
Affiliation modified +
NegativePrecedingEvent modified +
InstanceEdit modified +
Summation created 1
Person created 1
ReferenceEntity created 1
AbstractModifiedResidue created 1
_UpdateTracker created 1
Event created 1
ReferenceSequence created 1
ChemicalDrug created 1
PsiMod created 1
ReferenceMolecule created 1
CrosslinkedResidue created 1
InterChainCrosslinkedResidue created 1
ModifiedNucleotide created 1
DatabaseIdentifier created 1
FailedReaction created 1
EntityWithAccessionedSequence created 1
EvidenceType created 1
TranslationalModification created 1
RegulationReference created 1
InteractionEvent created 1
ReferenceRNASequence created 1
Depolymerisation created 1
ReferenceGeneProduct created 1
GroupModifiedResidue created 1
CellDevelopmentStep created 1
PathwayDiagram created 1
EntityFunctionalStatus created 1
ControlledVocabulary created 1
ExternalOntology created 1
NegativeRegulation created 1
MarkerReference created 1
GO_MolecularFunction created 1
FragmentDeletionModification created 1
FrontPage created 1
GeneticallyModifiedResidue created 1
URL created 1
NegativePrecedingEventReason created 1
DrugActionType created 1
_DeletedInstance created 1
_Release created 1
ReferenceTherapeutic created 1
ModifiedResidue created 1
Polymer created 1
Anatomy created 1
Regulation created 1
_Deleted created 1
ReplacedResidue created 1
ReactionlikeEvent created 1
PositiveRegulation created 1
FragmentReplacedModification created 1
Reaction created 1
SimpleEntity created 1
Publication created 1
Book created 1
Drug created 1
SequenceOntology created 1
ReferenceGroup created 1
Species created 1
FunctionalStatusType created 1
TranscriptionalModification created 1
CellLineagePath created 1
NegativePrecedingEvent created 1
InstanceEdit created 1
Affiliation created 1
FragmentModification created 1
NonsenseMutation created 1
PositiveGeneExpressionRegulation created 1
Requirement created 1
FragmentInsertionModification created 1
Cell created 1
ControlReference created 1
StableIdentifierReleaseStatus created 1
CatalystActivityReference created 1
DeletedControlledVocabulary created 1
ReactionType created 1
DatabaseObject created 1
BlackBoxEvent created 1
StableIdentifierHistory created 1
NegativeGeneExpressionRegulation created 1
ProteinDrug created 1
ReferenceIsoform created 1
Taxon created 1
GO_CellularComponent created 1
OtherEntity created 1
GO_BiologicalProcess created 1
CellType created 1
Figure created 1
GenomeEncodedEntity created 1
StableIdentifier created 1
CandidateSet created 1
RNADrug created 1
PhysicalEntityCellType created 1
Pathway created 1
CatalystActivity created 1
EntitySet created 1
PhysicalEntity created 1
Disease created 1
LiteratureReference created 1
Compartment created 1
RetractionStatus created 1
Polymerisation created 1
Complex created 1
FunctionalStatus created 1
DefinedSet created 1
ReferenceDatabase created 1
IntraChainCrosslinkedResidue created 1
ReviewStatus created 1
ReferenceDNASequence created 1
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
Event structureModified +
Reaction structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Pathway structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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