Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
Reaction reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
Pathway reviewed +
RNADrug reviewed +
EntitySet reviewed +
PhysicalEntity reviewed +
CellLineagePath reviewed +
Drug reviewed +
CellDevelopmentStep reviewed +
Depolymerisation reviewed +
CandidateSet reviewed +
EntityWithAccessionedSequence reviewed +
ReactionlikeEvent reviewed +
Polymerisation reviewed +
Event reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
Cell reviewed +
DefinedSet reviewed +
SimpleEntity reviewed +
Complex reviewed +
OtherEntity reviewed +
OtherEntity created 1
ReferenceGroup created 1
GO_BiologicalProcess created 1
SimpleEntity created 1
CatalystActivity created 1
Complex created 1
EvidenceType created 1
DeletedControlledVocabulary created 1
GenomeEncodedEntity created 1
StableIdentifier created 1
RetractionStatus created 1
ModifiedNucleotide created 1
_Deleted created 1
GO_CellularComponent created 1
ExternalOntology created 1
ReactionlikeEvent created 1
ReferenceRNASequence created 1
FragmentDeletionModification created 1
ModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
CellDevelopmentStep created 1
Drug created 1
TranscriptionalModification created 1
_DeletedInstance created 1
ControlledVocabulary created 1
ReferenceEntity created 1
NegativePrecedingEvent created 1
MarkerReference created 1
NegativePrecedingEventReason created 1
ChemicalDrug created 1
BlackBoxEvent created 1
FunctionalStatusType created 1
CrosslinkedResidue created 1
StableIdentifierHistory created 1
ReferenceDNASequence created 1
Cell created 1
InteractionEvent created 1
NegativeGeneExpressionRegulation created 1
Polymer created 1
_UpdateTracker created 1
Species created 1
Polymerisation created 1
Event created 1
FailedReaction created 1
Book created 1
FunctionalStatus created 1
Publication created 1
EntitySet created 1
PhysicalEntityCellType created 1
GO_MolecularFunction created 1
Affiliation created 1
RegulationReference created 1
ReviewStatus created 1
Compartment created 1
NegativeRegulation created 1
GeneticallyModifiedResidue created 1
DefinedSet created 1
InterChainCrosslinkedResidue created 1
PathwayDiagram created 1
IntraChainCrosslinkedResidue created 1
DatabaseObject created 1
StableIdentifierReleaseStatus created 1
Regulation created 1
ReferenceTherapeutic created 1
CandidateSet created 1
ReferenceIsoform created 1
FragmentModification created 1
PositiveRegulation created 1
AbstractModifiedResidue created 1
ControlReference created 1
RNADrug created 1
ReactionType created 1
ReferenceSequence created 1
Summation created 1
Reaction created 1
URL created 1
FragmentReplacedModification created 1
DrugActionType created 1
Requirement created 1
CellType created 1
DatabaseIdentifier created 1
Figure created 1
Anatomy created 1
EntityFunctionalStatus created 1
ProteinDrug created 1
PsiMod created 1
GroupModifiedResidue created 1
ReferenceDatabase created 1
CatalystActivityReference created 1
EntityWithAccessionedSequence created 1
InstanceEdit created 1
TranslationalModification created 1
FragmentInsertionModification created 1
Depolymerisation created 1
ReferenceMolecule created 1
LiteratureReference created 1
Taxon created 1
Person created 1
SequenceOntology created 1
PhysicalEntity created 1
NonsenseMutation created 1
CellLineagePath created 1
ReplacedResidue created 1
_Release created 1
Disease created 1
FrontPage created 1
Pathway created 1
ReferenceGeneProduct created 1
_Deleted replacementInstances +
CellLineagePath revised +
PhysicalEntity revised +
EntitySet revised +
RNADrug revised +
BlackBoxEvent revised +
ChemicalDrug revised +
Pathway revised +
Reaction revised +
CandidateSet revised +
Depolymerisation revised +
CellDevelopmentStep revised +
Drug revised +
Polymer revised +
ProteinDrug revised +
Event revised +
FailedReaction revised +
Polymerisation revised +
ReactionlikeEvent revised +
EntityWithAccessionedSequence revised +
OtherEntity revised +
Complex revised +
DefinedSet revised +
SimpleEntity revised +
Cell revised +
InteractionEvent revised +
GenomeEncodedEntity revised +
Depolymerisation structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
Event structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
PathwayDiagram modified +
InterChainCrosslinkedResidue modified +
DefinedSet modified +
Affiliation modified +
RegulationReference modified +
ReviewStatus modified +
Compartment modified +
NegativeRegulation modified +
GeneticallyModifiedResidue modified +
ReferenceTherapeutic modified +
Regulation modified +
StableIdentifierReleaseStatus modified +
DatabaseObject modified +
IntraChainCrosslinkedResidue modified +
FragmentModification modified +
ReferenceIsoform modified +
CandidateSet modified +
URL modified +
Reaction modified +
FragmentReplacedModification modified +
DrugActionType modified +
RNADrug modified +
ReactionType modified +
Summation modified +
ReferenceSequence modified +
AbstractModifiedResidue modified +
ControlReference modified +
PositiveRegulation modified +
EntityFunctionalStatus modified +
Figure modified +
Anatomy modified +
Requirement modified +
CellType modified +
DatabaseIdentifier modified +
CatalystActivityReference modified +
InstanceEdit modified +
EntityWithAccessionedSequence modified +
ReferenceDatabase modified +
GroupModifiedResidue modified +
ProteinDrug modified +
PsiMod modified +
LiteratureReference modified +
Taxon modified +
Person modified +
ReferenceMolecule modified +
Depolymerisation modified +
FragmentInsertionModification modified +
TranslationalModification modified +
ReferenceGeneProduct modified +
Pathway modified +
FrontPage modified +
Disease modified +
ReplacedResidue modified +
_Release modified +
SequenceOntology modified +
NonsenseMutation modified +
PhysicalEntity modified +
CellLineagePath modified +
GenomeEncodedEntity modified +
RetractionStatus modified +
ModifiedNucleotide modified +
StableIdentifier modified +
EvidenceType modified +
DeletedControlledVocabulary modified +
SimpleEntity modified +
Complex modified +
CatalystActivity modified +
OtherEntity modified +
ReferenceGroup modified +
GO_BiologicalProcess modified +
ReferenceRNASequence modified +
ReactionlikeEvent modified +
ExternalOntology modified +
GO_CellularComponent modified +
_Deleted modified +
TranscriptionalModification modified +
_DeletedInstance modified +
Drug modified +
CellDevelopmentStep modified +
PositiveGeneExpressionRegulation modified +
FragmentDeletionModification modified +
ModifiedResidue modified +
ChemicalDrug modified +
BlackBoxEvent modified +
FunctionalStatusType modified +
NegativePrecedingEvent modified +
MarkerReference modified +
NegativePrecedingEventReason modified +
ReferenceEntity modified +
ControlledVocabulary modified +
InteractionEvent modified +
NegativeGeneExpressionRegulation modified +
ReferenceDNASequence modified +
Cell modified +
StableIdentifierHistory modified +
CrosslinkedResidue modified +
Book modified +
FunctionalStatus modified +
Polymerisation modified +
Event modified +
FailedReaction modified +
Species modified +
Polymer modified +
_UpdateTracker modified +
GO_MolecularFunction modified +
PhysicalEntityCellType modified +
EntitySet modified +
Publication modified +
ProteinDrug authored 1
Polymer authored 1
EntityWithAccessionedSequence authored 1
Event authored +
FailedReaction authored +
Polymerisation authored +
ReactionlikeEvent authored +
Complex authored 1
DefinedSet authored 1
SimpleEntity authored 1
OtherEntity authored 1
GenomeEncodedEntity authored 1
InteractionEvent authored +
Cell authored 1
CellLineagePath authored +
PhysicalEntity authored 1
ChemicalDrug authored 1
BlackBoxEvent authored +
Reaction authored +
Pathway authored +
EntitySet authored 1
RNADrug authored 1
Depolymerisation authored +
CandidateSet authored 1
Drug authored 1
CellDevelopmentStep authored +
ProteinDrug edited +
Polymer edited +
EntityWithAccessionedSequence edited +
Polymerisation edited +
ReactionlikeEvent edited +
Event edited +
FailedReaction edited +
SimpleEntity edited +
DefinedSet edited +
Complex edited +
OtherEntity edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
Cell edited +
PhysicalEntity edited +
CellLineagePath edited +
Pathway edited +
ChemicalDrug edited +
BlackBoxEvent edited +
Reaction edited +
RNADrug edited +
EntitySet edited +
Depolymerisation edited +
CandidateSet edited +
Drug edited +
CellDevelopmentStep edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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