Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Figure modified +
EntityWithAccessionedSequence modified +
StableIdentifierReleaseStatus modified +
Affiliation modified +
Book modified +
CrosslinkedResidue modified +
ReferenceSequence modified +
DatabaseIdentifier modified +
ReviewStatus modified +
CellDevelopmentStep modified +
Regulation modified +
DrugActionType modified +
PsiMod modified +
NegativePrecedingEvent modified +
GeneticallyModifiedResidue modified +
GO_BiologicalProcess modified +
ReferenceEntity modified +
NegativeRegulation modified +
NegativeGeneExpressionRegulation modified +
PhysicalEntityCellType modified +
Compartment modified +
ReactionType modified +
ReferenceDatabase modified +
GenomeEncodedEntity modified +
SimpleEntity modified +
RegulationReference modified +
_DeletedInstance modified +
ReferenceIsoform modified +
DefinedSet modified +
DatabaseObject modified +
PositiveGeneExpressionRegulation modified +
FragmentInsertionModification modified +
FunctionalStatusType modified +
InterChainCrosslinkedResidue modified +
FunctionalStatus modified +
PathwayDiagram modified +
NegativePrecedingEventReason modified +
ChemicalDrug modified +
Requirement modified +
TranslationalModification modified +
FragmentReplacedModification modified +
InstanceEdit modified +
ModifiedResidue modified +
Summation modified +
RNADrug modified +
_Deleted modified +
Drug modified +
DeletedControlledVocabulary modified +
Person modified +
GO_CellularComponent modified +
EntityFunctionalStatus modified +
ReferenceRNASequence modified +
ReferenceDNASequence modified +
ExternalOntology modified +
ReactionlikeEvent modified +
Reaction modified +
OtherEntity modified +
ReferenceTherapeutic modified +
LiteratureReference modified +
RetractionStatus modified +
Cell modified +
CandidateSet modified +
CellType modified +
InteractionEvent modified +
ProteinDrug modified +
_Release modified +
FragmentModification modified +
Polymerisation modified +
Event modified +
FrontPage modified +
Taxon modified +
NonsenseMutation modified +
ReferenceGeneProduct modified +
IntraChainCrosslinkedResidue modified +
ReferenceGroup modified +
StableIdentifier modified +
PhysicalEntity modified +
URL modified +
StableIdentifierHistory modified +
Disease modified +
Publication modified +
AbstractModifiedResidue modified +
SequenceOntology modified +
ReplacedResidue modified +
EntitySet modified +
ControlledVocabulary modified +
_UpdateTracker modified +
Complex modified +
TranscriptionalModification modified +
Pathway modified +
GroupModifiedResidue modified +
Species modified +
BlackBoxEvent modified +
EvidenceType modified +
CatalystActivity modified +
PositiveRegulation modified +
ControlReference modified +
Depolymerisation modified +
FragmentDeletionModification modified +
GO_MolecularFunction modified +
CatalystActivityReference modified +
ModifiedNucleotide modified +
MarkerReference modified +
ReferenceMolecule modified +
Polymer modified +
FailedReaction modified +
Anatomy modified +
CellLineagePath modified +
DatabaseIdentifier created 1
ReferenceSequence created 1
CrosslinkedResidue created 1
Book created 1
Regulation created 1
CellDevelopmentStep created 1
ReviewStatus created 1
Figure created 1
StableIdentifierReleaseStatus created 1
Affiliation created 1
EntityWithAccessionedSequence created 1
GenomeEncodedEntity created 1
ReferenceDatabase created 1
NegativeGeneExpressionRegulation created 1
NegativeRegulation created 1
PhysicalEntityCellType created 1
Compartment created 1
ReactionType created 1
RegulationReference created 1
SimpleEntity created 1
PsiMod created 1
DrugActionType created 1
ReferenceEntity created 1
NegativePrecedingEvent created 1
GeneticallyModifiedResidue created 1
GO_BiologicalProcess created 1
FunctionalStatus created 1
PathwayDiagram created 1
InterChainCrosslinkedResidue created 1
FunctionalStatusType created 1
Requirement created 1
ChemicalDrug created 1
NegativePrecedingEventReason created 1
PositiveGeneExpressionRegulation created 1
DatabaseObject created 1
ReferenceIsoform created 1
DefinedSet created 1
_DeletedInstance created 1
FragmentInsertionModification created 1
DeletedControlledVocabulary created 1
Drug created 1
_Deleted created 1
GO_CellularComponent created 1
EntityFunctionalStatus created 1
Person created 1
FragmentReplacedModification created 1
TranslationalModification created 1
RNADrug created 1
Summation created 1
ModifiedResidue created 1
InstanceEdit created 1
LiteratureReference created 1
ReferenceTherapeutic created 1
OtherEntity created 1
Cell created 1
RetractionStatus created 1
ReferenceDNASequence created 1
ReferenceRNASequence created 1
ReactionlikeEvent created 1
Reaction created 1
ExternalOntology created 1
FrontPage created 1
Taxon created 1
Event created 1
IntraChainCrosslinkedResidue created 1
ReferenceGeneProduct created 1
NonsenseMutation created 1
InteractionEvent created 1
ProteinDrug created 1
CellType created 1
CandidateSet created 1
FragmentModification created 1
Polymerisation created 1
_Release created 1
ReplacedResidue created 1
SequenceOntology created 1
AbstractModifiedResidue created 1
EntitySet created 1
ControlledVocabulary created 1
URL created 1
StableIdentifierHistory created 1
PhysicalEntity created 1
ReferenceGroup created 1
StableIdentifier created 1
Publication created 1
Disease created 1
ReferenceMolecule created 1
ModifiedNucleotide created 1
MarkerReference created 1
CatalystActivityReference created 1
GO_MolecularFunction created 1
FragmentDeletionModification created 1
Depolymerisation created 1
CellLineagePath created 1
Anatomy created 1
FailedReaction created 1
Polymer created 1
Pathway created 1
Complex created 1
TranscriptionalModification created 1
_UpdateTracker created 1
PositiveRegulation created 1
ControlReference created 1
EvidenceType created 1
CatalystActivity created 1
BlackBoxEvent created 1
Species created 1
GroupModifiedResidue created 1
ChemicalDrug revised +
Cell revised +
EntitySet revised +
CellDevelopmentStep revised +
OtherEntity revised +
Reaction revised +
ReactionlikeEvent revised +
EntityWithAccessionedSequence revised +
PhysicalEntity revised +
DefinedSet revised +
FailedReaction revised +
CellLineagePath revised +
Polymer revised +
SimpleEntity revised +
Drug revised +
GenomeEncodedEntity revised +
Depolymerisation revised +
Event revised +
Polymerisation revised +
RNADrug revised +
BlackBoxEvent revised +
Pathway revised +
InteractionEvent revised +
ProteinDrug revised +
CandidateSet revised +
Complex revised +
Polymerisation authored +
RNADrug authored 1
BlackBoxEvent authored +
Pathway authored +
InteractionEvent authored +
ProteinDrug authored 1
CandidateSet authored 1
Complex authored 1
FailedReaction authored +
CellLineagePath authored +
SimpleEntity authored 1
Polymer authored 1
Drug authored 1
GenomeEncodedEntity authored 1
Depolymerisation authored +
Event authored +
ReactionlikeEvent authored +
Reaction authored +
EntityWithAccessionedSequence authored 1
DefinedSet authored 1
PhysicalEntity authored 1
ChemicalDrug authored 1
Cell authored 1
EntitySet authored 1
CellDevelopmentStep authored +
OtherEntity authored 1
FailedReaction reviewed +
CellLineagePath reviewed +
Polymer reviewed +
SimpleEntity reviewed +
Drug reviewed +
GenomeEncodedEntity reviewed +
Depolymerisation reviewed +
Event reviewed +
Polymerisation reviewed +
RNADrug reviewed +
BlackBoxEvent reviewed +
Pathway reviewed +
InteractionEvent reviewed +
ProteinDrug reviewed +
CandidateSet reviewed +
Complex reviewed +
ChemicalDrug reviewed +
Cell reviewed +
EntitySet reviewed +
CellDevelopmentStep reviewed +
OtherEntity reviewed +
ReactionlikeEvent reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
DefinedSet reviewed +
Reaction structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Pathway structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
Event structureModified +
Depolymerisation structureModified +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
Reaction edited +
PhysicalEntity edited +
DefinedSet edited +
CellDevelopmentStep edited +
EntitySet edited +
Cell edited +
ChemicalDrug edited +
OtherEntity edited +
BlackBoxEvent edited +
RNADrug edited +
Polymerisation edited +
Complex edited +
CandidateSet edited +
ProteinDrug edited +
InteractionEvent edited +
Pathway edited +
SimpleEntity edited +
Polymer edited +
CellLineagePath edited +
FailedReaction edited +
Event edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
Drug edited +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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