Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ChemicalDrug edited +
ReactionlikeEvent edited +
Drug edited +
Polymer edited +
Complex edited +
CandidateSet edited +
OtherEntity edited +
ProteinDrug edited +
Polymerisation edited +
EntitySet edited +
PhysicalEntity edited +
Depolymerisation edited +
EntityWithAccessionedSequence edited +
GenomeEncodedEntity edited +
SimpleEntity edited +
Cell edited +
CellDevelopmentStep edited +
Pathway edited +
InteractionEvent edited +
RNADrug edited +
FailedReaction edited +
CellLineagePath edited +
Reaction edited +
DefinedSet edited +
BlackBoxEvent edited +
Event edited +
Pathway internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
Pathway modified +
TranslationalModification modified +
ReferenceDatabase modified +
InterChainCrosslinkedResidue modified +
DatabaseIdentifier modified +
ControlledVocabulary modified +
CellDevelopmentStep modified +
FailedReaction modified +
PhysicalEntityCellType modified +
FragmentModification modified +
BlackBoxEvent modified +
Requirement modified +
ReferenceTherapeutic modified +
ReferenceDNASequence modified +
Polymer modified +
_UpdateTracker modified +
Species modified +
ExternalOntology modified +
FrontPage modified +
StableIdentifierHistory modified +
Drug modified +
ReviewStatus modified +
ChemicalDrug modified +
ReactionlikeEvent modified +
Book modified +
_Deleted modified +
GO_CellularComponent modified +
EntityFunctionalStatus modified +
SimpleEntity modified +
Anatomy modified +
GeneticallyModifiedResidue modified +
IntraChainCrosslinkedResidue modified +
Reaction modified +
DefinedSet modified +
RegulationReference modified +
URL modified +
Taxon modified +
_Release modified +
DatabaseObject modified +
FragmentDeletionModification modified +
Publication modified +
EvidenceType modified +
ModifiedNucleotide modified +
OtherEntity modified +
NegativePrecedingEventReason modified +
PositiveRegulation modified +
FragmentReplacedModification modified +
FunctionalStatusType modified +
Polymerisation modified +
PhysicalEntity modified +
EntitySet modified +
ReactionType modified +
InteractionEvent modified +
ReferenceEntity modified +
GenomeEncodedEntity modified +
PathwayDiagram modified +
FunctionalStatus modified +
SequenceOntology modified +
CellLineagePath modified +
GroupModifiedResidue modified +
Event modified +
InstanceEdit modified +
AbstractModifiedResidue modified +
NegativePrecedingEvent modified +
RNADrug modified +
Regulation modified +
StableIdentifierReleaseStatus modified +
ReplacedResidue modified +
Complex modified +
CandidateSet modified +
ReferenceMolecule modified +
ReferenceGroup modified +
CatalystActivityReference modified +
Figure modified +
_DeletedInstance modified +
FragmentInsertionModification modified +
ReferenceRNASequence modified +
DrugActionType modified +
ProteinDrug modified +
NegativeRegulation modified +
ReferenceGeneProduct modified +
NegativeGeneExpressionRegulation modified +
CatalystActivity modified +
PositiveGeneExpressionRegulation modified +
ControlReference modified +
NonsenseMutation modified +
CrosslinkedResidue modified +
DeletedControlledVocabulary modified +
Summation modified +
StableIdentifier modified +
Cell modified +
TranscriptionalModification modified +
LiteratureReference modified +
GO_MolecularFunction modified +
RetractionStatus modified +
ReferenceIsoform modified +
PsiMod modified +
GO_BiologicalProcess modified +
ModifiedResidue modified +
ReferenceSequence modified +
MarkerReference modified +
Disease modified +
EntityWithAccessionedSequence modified +
Depolymerisation modified +
CellType modified +
Affiliation modified +
Person modified +
Compartment modified +
Polymer revised +
Complex revised +
OtherEntity revised +
CandidateSet revised +
ChemicalDrug revised +
ReactionlikeEvent revised +
Drug revised +
Depolymerisation revised +
EntityWithAccessionedSequence revised +
Polymerisation revised +
ProteinDrug revised +
EntitySet revised +
PhysicalEntity revised +
InteractionEvent revised +
Pathway revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
Cell revised +
CellDevelopmentStep revised +
FailedReaction revised +
CellLineagePath revised +
Reaction revised +
DefinedSet revised +
BlackBoxEvent revised +
Event revised +
RNADrug revised +
_Deleted replacementInstances +
CatalystActivity created 1
NegativeGeneExpressionRegulation created 1
PositiveGeneExpressionRegulation created 1
ControlReference created 1
DrugActionType created 1
ProteinDrug created 1
ReferenceGeneProduct created 1
NegativeRegulation created 1
ReferenceRNASequence created 1
FragmentInsertionModification created 1
Figure created 1
_DeletedInstance created 1
CatalystActivityReference created 1
CandidateSet created 1
ReferenceGroup created 1
ReferenceMolecule created 1
StableIdentifierReleaseStatus created 1
Complex created 1
ReplacedResidue created 1
InstanceEdit created 1
NegativePrecedingEvent created 1
AbstractModifiedResidue created 1
RNADrug created 1
Regulation created 1
GroupModifiedResidue created 1
Event created 1
CellLineagePath created 1
SequenceOntology created 1
PathwayDiagram created 1
FunctionalStatus created 1
ReferenceEntity created 1
GenomeEncodedEntity created 1
InteractionEvent created 1
ReactionType created 1
Compartment created 1
Person created 1
EntityWithAccessionedSequence created 1
Depolymerisation created 1
Affiliation created 1
CellType created 1
MarkerReference created 1
Disease created 1
ModifiedResidue created 1
ReferenceSequence created 1
PsiMod created 1
GO_BiologicalProcess created 1
ReferenceIsoform created 1
RetractionStatus created 1
TranscriptionalModification created 1
LiteratureReference created 1
GO_MolecularFunction created 1
Cell created 1
NonsenseMutation created 1
CrosslinkedResidue created 1
DeletedControlledVocabulary created 1
Summation created 1
StableIdentifier created 1
GO_CellularComponent created 1
Book created 1
_Deleted created 1
ReviewStatus created 1
Drug created 1
ReactionlikeEvent created 1
ChemicalDrug created 1
Species created 1
ExternalOntology created 1
FrontPage created 1
StableIdentifierHistory created 1
_UpdateTracker created 1
Polymer created 1
ReferenceDNASequence created 1
ReferenceTherapeutic created 1
BlackBoxEvent created 1
Requirement created 1
FailedReaction created 1
PhysicalEntityCellType created 1
FragmentModification created 1
ControlledVocabulary created 1
CellDevelopmentStep created 1
DatabaseIdentifier created 1
ReferenceDatabase created 1
InterChainCrosslinkedResidue created 1
Pathway created 1
TranslationalModification created 1
PhysicalEntity created 1
EntitySet created 1
Polymerisation created 1
FunctionalStatusType created 1
FragmentReplacedModification created 1
PositiveRegulation created 1
NegativePrecedingEventReason created 1
OtherEntity created 1
ModifiedNucleotide created 1
Publication created 1
EvidenceType created 1
FragmentDeletionModification created 1
Taxon created 1
_Release created 1
DatabaseObject created 1
DefinedSet created 1
RegulationReference created 1
URL created 1
Reaction created 1
SimpleEntity created 1
Anatomy created 1
GeneticallyModifiedResidue created 1
IntraChainCrosslinkedResidue created 1
EntityFunctionalStatus created 1
RNADrug reviewed +
Event reviewed +
BlackBoxEvent reviewed +
FailedReaction reviewed +
CellLineagePath reviewed +
DefinedSet reviewed +
Reaction reviewed +
Cell reviewed +
CellDevelopmentStep reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
InteractionEvent reviewed +
Pathway reviewed +
EntitySet reviewed +
PhysicalEntity reviewed +
Polymerisation reviewed +
ProteinDrug reviewed +
EntityWithAccessionedSequence reviewed +
Depolymerisation reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
Drug reviewed +
CandidateSet reviewed +
OtherEntity reviewed +
Complex reviewed +
Polymer reviewed +
RNADrug authored 1
DefinedSet authored 1
Reaction authored +
CellLineagePath authored +
FailedReaction authored +
Event authored +
BlackBoxEvent authored +
SimpleEntity authored 1
GenomeEncodedEntity authored 1
CellDevelopmentStep authored +
Cell authored 1
Pathway authored +
InteractionEvent authored +
Polymerisation authored +
ProteinDrug authored 1
PhysicalEntity authored 1
EntitySet authored 1
EntityWithAccessionedSequence authored 1
Depolymerisation authored +
Drug authored 1
ChemicalDrug authored 1
ReactionlikeEvent authored +
Complex authored 1
Polymer authored 1
CandidateSet authored 1
OtherEntity authored 1
Polymerisation structureModified +
Reaction structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
Pathway structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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