Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Complex authored 1
Polymer authored 1
SimpleEntity authored 1
FailedReaction authored +
Cell authored 1
RNADrug authored 1
OtherEntity authored 1
ProteinDrug authored 1
Drug authored 1
Reaction authored +
EntitySet authored 1
GenomeEncodedEntity authored 1
BlackBoxEvent authored +
CandidateSet authored 1
InteractionEvent authored +
CellDevelopmentStep authored +
ReactionlikeEvent authored +
Event authored +
PhysicalEntity authored 1
DefinedSet authored 1
Depolymerisation authored +
EntityWithAccessionedSequence authored 1
Polymerisation authored +
Pathway authored +
ChemicalDrug authored 1
CellLineagePath authored +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
ChemicalDrug created 1
ReferenceEntity created 1
Pathway created 1
CellLineagePath created 1
ExternalOntology created 1
MarkerReference created 1
StableIdentifierHistory created 1
EntityFunctionalStatus created 1
TranscriptionalModification created 1
NegativeRegulation created 1
_DeletedInstance created 1
Disease created 1
DrugActionType created 1
Anatomy created 1
PhysicalEntity created 1
StableIdentifier created 1
DatabaseIdentifier created 1
GeneticallyModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
Summation created 1
GO_CellularComponent created 1
ReferenceGroup created 1
CandidateSet created 1
ReactionType created 1
NegativeGeneExpressionRegulation created 1
CrosslinkedResidue created 1
DeletedControlledVocabulary created 1
CatalystActivityReference created 1
SimpleEntity created 1
ReferenceTherapeutic created 1
NegativePrecedingEventReason created 1
ModifiedNucleotide created 1
ReplacedResidue created 1
CellType created 1
Event created 1
InteractionEvent created 1
GenomeEncodedEntity created 1
FragmentModification created 1
SequenceOntology created 1
Person created 1
EntitySet created 1
ReferenceRNASequence created 1
URL created 1
ReferenceDNASequence created 1
Species created 1
Polymer created 1
Requirement created 1
_Release created 1
FrontPage created 1
Depolymerisation created 1
DefinedSet created 1
Polymerisation created 1
GO_BiologicalProcess created 1
ControlReference created 1
DatabaseObject created 1
NegativePrecedingEvent created 1
ReferenceIsoform created 1
CatalystActivity created 1
FragmentReplacedModification created 1
BlackBoxEvent created 1
FragmentInsertionModification created 1
ReferenceGeneProduct created 1
Book created 1
StableIdentifierReleaseStatus created 1
RetractionStatus created 1
TranslationalModification created 1
IntraChainCrosslinkedResidue created 1
OtherEntity created 1
Reaction created 1
PsiMod created 1
ProteinDrug created 1
_Deleted created 1
_UpdateTracker created 1
Cell created 1
RNADrug created 1
PathwayDiagram created 1
GroupModifiedResidue created 1
AbstractModifiedResidue created 1
Complex created 1
ControlledVocabulary created 1
InstanceEdit created 1
ReviewStatus created 1
LiteratureReference created 1
ReferenceMolecule created 1
ModifiedResidue created 1
EntityWithAccessionedSequence created 1
RegulationReference created 1
ReferenceDatabase created 1
FunctionalStatus created 1
Figure created 1
ReactionlikeEvent created 1
InterChainCrosslinkedResidue created 1
EvidenceType created 1
CellDevelopmentStep created 1
FragmentDeletionModification created 1
GO_MolecularFunction created 1
Drug created 1
FunctionalStatusType created 1
PositiveRegulation created 1
Regulation created 1
NonsenseMutation created 1
Publication created 1
Affiliation created 1
Taxon created 1
ReferenceSequence created 1
FailedReaction created 1
Compartment created 1
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
Reaction structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
CellDevelopmentStep edited +
InteractionEvent edited +
PhysicalEntity edited +
Event edited +
ReactionlikeEvent edited +
Polymerisation edited +
DefinedSet edited +
Depolymerisation edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
ChemicalDrug edited +
Pathway edited +
FailedReaction edited +
Complex edited +
Polymer edited +
SimpleEntity edited +
RNADrug edited +
Cell edited +
EntitySet edited +
Reaction edited +
ProteinDrug edited +
Drug edited +
OtherEntity edited +
CandidateSet edited +
GenomeEncodedEntity edited +
BlackBoxEvent edited +
_Deleted replacementInstances +
Polymerisation reviewed +
EntityWithAccessionedSequence reviewed +
Depolymerisation reviewed +
DefinedSet reviewed +
CellLineagePath reviewed +
ChemicalDrug reviewed +
Pathway reviewed +
CellDevelopmentStep reviewed +
InteractionEvent reviewed +
Event reviewed +
PhysicalEntity reviewed +
ReactionlikeEvent reviewed +
Reaction reviewed +
EntitySet reviewed +
Drug reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
FailedReaction reviewed +
SimpleEntity reviewed +
Complex reviewed +
Polymer reviewed +
RNADrug reviewed +
Cell reviewed +
CandidateSet revised +
BlackBoxEvent revised +
GenomeEncodedEntity revised +
ProteinDrug revised +
Drug revised +
EntitySet revised +
Reaction revised +
OtherEntity revised +
RNADrug revised +
Cell revised +
Polymer revised +
Complex revised +
SimpleEntity revised +
FailedReaction revised +
CellLineagePath revised +
Pathway revised +
ChemicalDrug revised +
Polymerisation revised +
EntityWithAccessionedSequence revised +
Depolymerisation revised +
DefinedSet revised +
PhysicalEntity revised +
Event revised +
ReactionlikeEvent revised +
CellDevelopmentStep revised +
InteractionEvent revised +
CatalystActivity modified +
ReferenceIsoform modified +
FragmentReplacedModification modified +
ControlReference modified +
DatabaseObject modified +
NegativePrecedingEvent modified +
Depolymerisation modified +
DefinedSet modified +
GO_BiologicalProcess modified +
Polymerisation modified +
_Release modified +
Requirement modified +
FrontPage modified +
PathwayDiagram modified +
Complex modified +
AbstractModifiedResidue modified +
GroupModifiedResidue modified +
Cell modified +
_UpdateTracker modified +
RNADrug modified +
OtherEntity modified +
IntraChainCrosslinkedResidue modified +
TranslationalModification modified +
_Deleted modified +
ProteinDrug modified +
PsiMod modified +
Reaction modified +
ReferenceGeneProduct modified +
Book modified +
FragmentInsertionModification modified +
BlackBoxEvent modified +
RetractionStatus modified +
StableIdentifierReleaseStatus modified +
EvidenceType modified +
CellDevelopmentStep modified +
ReactionlikeEvent modified +
Figure modified +
InterChainCrosslinkedResidue modified +
FunctionalStatus modified +
EntityWithAccessionedSequence modified +
ModifiedResidue modified +
ReferenceMolecule modified +
ReferenceDatabase modified +
RegulationReference modified +
ReviewStatus modified +
InstanceEdit modified +
ControlledVocabulary modified +
LiteratureReference modified +
Taxon modified +
Affiliation modified +
Publication modified +
Compartment modified +
ReferenceSequence modified +
FailedReaction modified +
PositiveRegulation modified +
NonsenseMutation modified +
Regulation modified +
GO_MolecularFunction modified +
Drug modified +
FunctionalStatusType modified +
FragmentDeletionModification modified +
DatabaseIdentifier modified +
StableIdentifier modified +
PositiveGeneExpressionRegulation modified +
GeneticallyModifiedResidue modified +
Disease modified +
DrugActionType modified +
PhysicalEntity modified +
Anatomy modified +
StableIdentifierHistory modified +
_DeletedInstance modified +
NegativeRegulation modified +
TranscriptionalModification modified +
EntityFunctionalStatus modified +
Pathway modified +
ChemicalDrug modified +
ReferenceEntity modified +
CellLineagePath modified +
ExternalOntology modified +
MarkerReference modified +
SimpleEntity modified +
CatalystActivityReference modified +
DeletedControlledVocabulary modified +
CrosslinkedResidue modified +
NegativeGeneExpressionRegulation modified +
ReferenceGroup modified +
GO_CellularComponent modified +
Summation modified +
CandidateSet modified +
ReactionType modified +
InteractionEvent modified +
Event modified +
NegativePrecedingEventReason modified +
ReferenceTherapeutic modified +
CellType modified +
ReplacedResidue modified +
ModifiedNucleotide modified +
ReferenceDNASequence modified +
Polymer modified +
Species modified +
URL modified +
SequenceOntology modified +
ReferenceRNASequence modified +
EntitySet modified +
Person modified +
GenomeEncodedEntity modified +
FragmentModification modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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