Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
OtherEntity edited +
BlackBoxEvent edited +
GenomeEncodedEntity edited +
Pathway edited +
Event edited +
EntitySet edited +
Depolymerisation edited +
ReactionlikeEvent edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
ProteinDrug edited +
InteractionEvent edited +
Polymer edited +
Reaction edited +
CellDevelopmentStep edited +
CellLineagePath edited +
Complex edited +
CandidateSet edited +
FailedReaction edited +
SimpleEntity edited +
DefinedSet edited +
ChemicalDrug edited +
Drug edited +
Cell edited +
Polymerisation edited +
RNADrug edited +
ReactionlikeEvent revised +
Depolymerisation revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
OtherEntity revised +
EntitySet revised +
Pathway revised +
Event revised +
GenomeEncodedEntity revised +
CandidateSet revised +
Complex revised +
Polymer revised +
Reaction revised +
CellDevelopmentStep revised +
CellLineagePath revised +
SimpleEntity revised +
FailedReaction revised +
InteractionEvent revised +
ProteinDrug revised +
RNADrug revised +
Polymerisation revised +
Drug revised +
DefinedSet revised +
ChemicalDrug revised +
Cell revised +
_Deleted replacementInstances +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
Event structureModified +
Pathway structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
InteractionEvent reviewed +
ProteinDrug reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
CandidateSet reviewed +
Complex reviewed +
Reaction reviewed +
CellDevelopmentStep reviewed +
CellLineagePath reviewed +
Polymer reviewed +
Pathway reviewed +
Event reviewed +
EntitySet reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
EntityWithAccessionedSequence reviewed +
Cell reviewed +
Drug reviewed +
ChemicalDrug reviewed +
DefinedSet reviewed +
Polymerisation reviewed +
RNADrug reviewed +
GroupModifiedResidue modified +
Taxon modified +
PhysicalEntityCellType modified +
PositiveRegulation modified +
NegativeGeneExpressionRegulation modified +
FragmentInsertionModification modified +
Cell modified +
InterChainCrosslinkedResidue modified +
CellLineagePath modified +
Publication modified +
EntityFunctionalStatus modified +
RetractionStatus modified +
ProteinDrug modified +
NegativePrecedingEvent modified +
GO_CellularComponent modified +
ReactionlikeEvent modified +
_UpdateTracker modified +
StableIdentifierReleaseStatus modified +
IntraChainCrosslinkedResidue modified +
Figure modified +
ReferenceRNASequence modified +
ReferenceMolecule modified +
CellType modified +
CatalystActivity modified +
DatabaseIdentifier modified +
FragmentModification modified +
FunctionalStatus modified +
ReferenceSequence modified +
Regulation modified +
AbstractModifiedResidue modified +
RNADrug modified +
ReferenceTherapeutic modified +
DefinedSet modified +
_Release modified +
Anatomy modified +
GO_MolecularFunction modified +
InstanceEdit modified +
Book modified +
Complex modified +
FailedReaction modified +
InteractionEvent modified +
Species modified +
ReferenceDNASequence modified +
Person modified +
Summation modified +
_DeletedInstance modified +
ReactionType modified +
GenomeEncodedEntity modified +
StableIdentifierHistory modified +
TranscriptionalModification modified +
LiteratureReference modified +
FunctionalStatusType modified +
GO_BiologicalProcess modified +
Requirement modified +
NegativeRegulation modified +
PathwayDiagram modified +
URL modified +
EvidenceType modified +
Affiliation modified +
ControlReference modified +
ReferenceGroup modified +
MarkerReference modified +
Drug modified +
CatalystActivityReference modified +
ControlledVocabulary modified +
CrosslinkedResidue modified +
CandidateSet modified +
Disease modified +
NegativePrecedingEventReason modified +
SimpleEntity modified +
SequenceOntology modified +
DeletedControlledVocabulary modified +
ReferenceGeneProduct modified +
ReferenceEntity modified +
StableIdentifier modified +
PhysicalEntity modified +
Depolymerisation modified +
RegulationReference modified +
ReferenceDatabase modified +
OtherEntity modified +
Pathway modified +
ModifiedResidue modified +
DatabaseObject modified +
DrugActionType modified +
FrontPage modified +
Compartment modified +
ModifiedNucleotide modified +
ReviewStatus modified +
Polymerisation modified +
_Deleted modified +
ChemicalDrug modified +
Reaction modified +
CellDevelopmentStep modified +
Polymer modified +
PsiMod modified +
ReferenceIsoform modified +
FragmentReplacedModification modified +
FragmentDeletionModification modified +
ExternalOntology modified +
EntityWithAccessionedSequence modified +
GeneticallyModifiedResidue modified +
PositiveGeneExpressionRegulation modified +
BlackBoxEvent modified +
NonsenseMutation modified +
ReplacedResidue modified +
EntitySet modified +
Event modified +
TranslationalModification modified +
DefinedSet authored 1
ChemicalDrug authored 1
Drug authored 1
Cell authored 1
Polymerisation authored +
RNADrug authored 1
ProteinDrug authored 1
InteractionEvent authored +
CellLineagePath authored +
Reaction authored +
CellDevelopmentStep authored +
Polymer authored 1
CandidateSet authored 1
Complex authored 1
FailedReaction authored +
SimpleEntity authored 1
OtherEntity authored 1
BlackBoxEvent authored +
Pathway authored +
GenomeEncodedEntity authored 1
Event authored +
EntitySet authored 1
EntityWithAccessionedSequence authored 1
Depolymerisation authored +
PhysicalEntity authored 1
ReactionlikeEvent authored +
FragmentDeletionModification created 1
FragmentReplacedModification created 1
PsiMod created 1
Reaction created 1
CellDevelopmentStep created 1
ReferenceIsoform created 1
Polymer created 1
EntitySet created 1
Event created 1
TranslationalModification created 1
ReplacedResidue created 1
BlackBoxEvent created 1
NonsenseMutation created 1
PositiveGeneExpressionRegulation created 1
GeneticallyModifiedResidue created 1
EntityWithAccessionedSequence created 1
ExternalOntology created 1
Compartment created 1
ModifiedNucleotide created 1
FrontPage created 1
DatabaseObject created 1
DrugActionType created 1
ModifiedResidue created 1
ChemicalDrug created 1
_Deleted created 1
Polymerisation created 1
ReviewStatus created 1
ReferenceGeneProduct created 1
DeletedControlledVocabulary created 1
SequenceOntology created 1
NegativePrecedingEventReason created 1
Disease created 1
SimpleEntity created 1
CrosslinkedResidue created 1
CandidateSet created 1
Pathway created 1
OtherEntity created 1
ReferenceDatabase created 1
RegulationReference created 1
PhysicalEntity created 1
Depolymerisation created 1
StableIdentifier created 1
ReferenceEntity created 1
Affiliation created 1
ControlReference created 1
EvidenceType created 1
PathwayDiagram created 1
URL created 1
Requirement created 1
NegativeRegulation created 1
GO_BiologicalProcess created 1
FunctionalStatusType created 1
LiteratureReference created 1
TranscriptionalModification created 1
ControlledVocabulary created 1
CatalystActivityReference created 1
Drug created 1
MarkerReference created 1
ReferenceGroup created 1
InteractionEvent created 1
Species created 1
FailedReaction created 1
Complex created 1
GenomeEncodedEntity created 1
StableIdentifierHistory created 1
_DeletedInstance created 1
ReactionType created 1
Summation created 1
Person created 1
ReferenceDNASequence created 1
FunctionalStatus created 1
DatabaseIdentifier created 1
FragmentModification created 1
CatalystActivity created 1
Book created 1
InstanceEdit created 1
Anatomy created 1
_Release created 1
GO_MolecularFunction created 1
DefinedSet created 1
ReferenceTherapeutic created 1
AbstractModifiedResidue created 1
RNADrug created 1
ReferenceSequence created 1
Regulation created 1
ProteinDrug created 1
NegativePrecedingEvent created 1
RetractionStatus created 1
EntityFunctionalStatus created 1
Publication created 1
CellLineagePath created 1
InterChainCrosslinkedResidue created 1
CellType created 1
ReferenceMolecule created 1
ReferenceRNASequence created 1
IntraChainCrosslinkedResidue created 1
StableIdentifierReleaseStatus created 1
Figure created 1
_UpdateTracker created 1
ReactionlikeEvent created 1
GO_CellularComponent created 1
Taxon created 1
GroupModifiedResidue created 1
Cell created 1
FragmentInsertionModification created 1
NegativeGeneExpressionRegulation created 1
PhysicalEntityCellType created 1
PositiveRegulation created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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