Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
BlackBoxEvent authored +
Drug authored 1
Cell authored 1
InteractionEvent authored +
FailedReaction authored +
CellLineagePath authored +
Polymerisation authored +
Depolymerisation authored +
RNADrug authored 1
EntityWithAccessionedSequence authored 1
Reaction authored +
ProteinDrug authored 1
Event authored +
ChemicalDrug authored 1
EntitySet authored 1
DefinedSet authored 1
PhysicalEntity authored 1
GenomeEncodedEntity authored 1
Polymer authored 1
Complex authored 1
CandidateSet authored 1
SimpleEntity authored 1
Pathway authored +
ReactionlikeEvent authored +
OtherEntity authored 1
CellDevelopmentStep authored +
Cell edited +
InteractionEvent edited +
FailedReaction edited +
BlackBoxEvent edited +
Drug edited +
Polymerisation edited +
Depolymerisation edited +
RNADrug edited +
CellLineagePath edited +
Event edited +
ChemicalDrug edited +
EntitySet edited +
DefinedSet edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
Reaction edited +
ProteinDrug edited +
SimpleEntity edited +
CandidateSet edited +
Pathway edited +
ReactionlikeEvent edited +
OtherEntity edited +
CellDevelopmentStep edited +
GenomeEncodedEntity edited +
Polymer edited +
Complex edited +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
Reaction revised +
EntitySet revised +
DefinedSet revised +
PhysicalEntity revised +
ChemicalDrug revised +
Event revised +
Complex revised +
GenomeEncodedEntity revised +
Polymer revised +
ReactionlikeEvent revised +
CellDevelopmentStep revised +
OtherEntity revised +
SimpleEntity revised +
CandidateSet revised +
Pathway revised +
Drug revised +
BlackBoxEvent revised +
FailedReaction revised +
Cell revised +
InteractionEvent revised +
CellLineagePath revised +
Polymerisation revised +
Depolymerisation revised +
RNADrug revised +
Reaction structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Event structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
Pathway structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
_Deleted replacementInstances +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
CatalystActivityReference modified +
DeletedControlledVocabulary modified +
EvidenceType modified +
DatabaseIdentifier modified +
ExternalOntology modified +
TranscriptionalModification modified +
Person modified +
_Deleted modified +
StableIdentifier modified +
ChemicalDrug modified +
Event modified +
SequenceOntology modified +
MarkerReference modified +
PhysicalEntity modified +
PositiveRegulation modified +
GenomeEncodedEntity modified +
Disease modified +
Complex modified +
CandidateSet modified +
ReferenceMolecule modified +
Pathway modified +
GroupModifiedResidue modified +
FrontPage modified +
BlackBoxEvent modified +
FunctionalStatus modified +
StableIdentifierReleaseStatus modified +
ReferenceDatabase modified +
ReferenceEntity modified +
ModifiedNucleotide modified +
ReferenceRNASequence modified +
_Release modified +
IntraChainCrosslinkedResidue modified +
FragmentModification modified +
CrosslinkedResidue modified +
EntityWithAccessionedSequence modified +
Requirement modified +
PositiveGeneExpressionRegulation modified +
ReviewStatus modified +
DefinedSet modified +
ReactionType modified +
InterChainCrosslinkedResidue modified +
FragmentDeletionModification modified +
PhysicalEntityCellType modified +
SimpleEntity modified +
Taxon modified +
Compartment modified +
FragmentReplacedModification modified +
ControlReference modified +
OtherEntity modified +
ReferenceSequence modified +
_UpdateTracker modified +
ControlledVocabulary modified +
ReferenceTherapeutic modified +
StableIdentifierHistory modified +
InteractionEvent modified +
RegulationReference modified +
NegativePrecedingEvent modified +
CatalystActivity modified +
Polymerisation modified +
Depolymerisation modified +
Anatomy modified +
RNADrug modified +
TranslationalModification modified +
Reaction modified +
PsiMod modified +
ProteinDrug modified +
GO_MolecularFunction modified +
ReferenceGeneProduct modified +
RetractionStatus modified +
EntitySet modified +
ReplacedResidue modified +
InstanceEdit modified +
Polymer modified +
PathwayDiagram modified +
NegativePrecedingEventReason modified +
Species modified +
LiteratureReference modified +
GO_CellularComponent modified +
ReferenceIsoform modified +
Drug modified +
Cell modified +
Regulation modified +
NonsenseMutation modified +
Figure modified +
FunctionalStatusType modified +
NegativeRegulation modified +
FailedReaction modified +
ModifiedResidue modified +
DrugActionType modified +
DatabaseObject modified +
GeneticallyModifiedResidue modified +
FragmentInsertionModification modified +
ReferenceDNASequence modified +
ReactionlikeEvent modified +
EntityFunctionalStatus modified +
CellDevelopmentStep modified +
CellType modified +
Publication modified +
URL modified +
Affiliation modified +
CellLineagePath modified +
Book modified +
Summation modified +
AbstractModifiedResidue modified +
NegativeGeneExpressionRegulation modified +
ReferenceGroup modified +
_DeletedInstance modified +
GO_BiologicalProcess modified +
FragmentInsertionModification created 1
GeneticallyModifiedResidue created 1
CellDevelopmentStep created 1
EntityFunctionalStatus created 1
ReactionlikeEvent created 1
ReferenceDNASequence created 1
URL created 1
Publication created 1
CellType created 1
GO_BiologicalProcess created 1
_DeletedInstance created 1
ReferenceGroup created 1
AbstractModifiedResidue created 1
Summation created 1
NegativeGeneExpressionRegulation created 1
CellLineagePath created 1
Book created 1
Affiliation created 1
ReplacedResidue created 1
RetractionStatus created 1
ReferenceGeneProduct created 1
EntitySet created 1
GO_MolecularFunction created 1
ProteinDrug created 1
Reaction created 1
PsiMod created 1
LiteratureReference created 1
Species created 1
NegativePrecedingEventReason created 1
PathwayDiagram created 1
Polymer created 1
InstanceEdit created 1
NegativeRegulation created 1
FailedReaction created 1
FunctionalStatusType created 1
Figure created 1
NonsenseMutation created 1
Regulation created 1
Cell created 1
Drug created 1
ReferenceIsoform created 1
GO_CellularComponent created 1
DatabaseObject created 1
DrugActionType created 1
ModifiedResidue created 1
ReactionType created 1
DefinedSet created 1
ReviewStatus created 1
PositiveGeneExpressionRegulation created 1
Requirement created 1
EntityWithAccessionedSequence created 1
OtherEntity created 1
ControlReference created 1
Compartment created 1
FragmentReplacedModification created 1
Taxon created 1
SimpleEntity created 1
PhysicalEntityCellType created 1
FragmentDeletionModification created 1
InterChainCrosslinkedResidue created 1
InteractionEvent created 1
RegulationReference created 1
ReferenceTherapeutic created 1
StableIdentifierHistory created 1
ControlledVocabulary created 1
_UpdateTracker created 1
ReferenceSequence created 1
TranslationalModification created 1
RNADrug created 1
Polymerisation created 1
Depolymerisation created 1
Anatomy created 1
CatalystActivity created 1
NegativePrecedingEvent created 1
PhysicalEntity created 1
MarkerReference created 1
SequenceOntology created 1
Event created 1
StableIdentifier created 1
_Deleted created 1
ChemicalDrug created 1
Person created 1
TranscriptionalModification created 1
ExternalOntology created 1
DeletedControlledVocabulary created 1
CatalystActivityReference created 1
DatabaseIdentifier created 1
EvidenceType created 1
GroupModifiedResidue created 1
ReferenceMolecule created 1
CandidateSet created 1
Pathway created 1
Complex created 1
Disease created 1
PositiveRegulation created 1
GenomeEncodedEntity created 1
ModifiedNucleotide created 1
ReferenceDatabase created 1
ReferenceEntity created 1
StableIdentifierReleaseStatus created 1
FunctionalStatus created 1
BlackBoxEvent created 1
FrontPage created 1
FragmentModification created 1
CrosslinkedResidue created 1
IntraChainCrosslinkedResidue created 1
_Release created 1
ReferenceRNASequence created 1
FailedReaction reviewed +
InteractionEvent reviewed +
Cell reviewed +
Drug reviewed +
BlackBoxEvent reviewed +
RNADrug reviewed +
Depolymerisation reviewed +
Polymerisation reviewed +
CellLineagePath reviewed +
PhysicalEntity reviewed +
EntitySet reviewed +
DefinedSet reviewed +
ChemicalDrug reviewed +
Event reviewed +
ProteinDrug reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
CellDevelopmentStep reviewed +
OtherEntity reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
SimpleEntity reviewed +
Pathway reviewed +
Complex reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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