Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
_Deleted replacementInstances +
InteractionEvent revised +
Polymer revised +
PhysicalEntity revised +
BlackBoxEvent revised +
ReactionlikeEvent revised +
FailedReaction revised +
Depolymerisation revised +
Drug revised +
Polymerisation revised +
Complex revised +
CandidateSet revised +
CellLineagePath revised +
Cell revised +
ProteinDrug revised +
CellDevelopmentStep revised +
EntityWithAccessionedSequence revised +
Reaction revised +
Event revised +
Pathway revised +
GenomeEncodedEntity revised +
OtherEntity revised +
ChemicalDrug revised +
RNADrug revised +
EntitySet revised +
DefinedSet revised +
SimpleEntity revised +
EntitySet edited +
RNADrug edited +
ChemicalDrug edited +
OtherEntity edited +
SimpleEntity edited +
DefinedSet edited +
Event edited +
Reaction edited +
EntityWithAccessionedSequence edited +
GenomeEncodedEntity edited +
Pathway edited +
CellDevelopmentStep edited +
ProteinDrug edited +
Cell edited +
CellLineagePath edited +
Complex edited +
Polymerisation edited +
CandidateSet edited +
Depolymerisation edited +
Drug edited +
FailedReaction edited +
Polymer edited +
InteractionEvent edited +
ReactionlikeEvent edited +
BlackBoxEvent edited +
PhysicalEntity edited +
EntitySet modified +
Species modified +
_Deleted modified +
GO_MolecularFunction modified +
Regulation modified +
GO_BiologicalProcess modified +
RegulationReference modified +
Taxon modified +
StableIdentifierHistory modified +
DefinedSet modified +
Reaction modified +
EvidenceType modified +
Figure modified +
CellDevelopmentStep modified +
Compartment modified +
Depolymerisation modified +
_Release modified +
FailedReaction modified +
MarkerReference modified +
EntityFunctionalStatus modified +
LiteratureReference modified +
ExternalOntology modified +
ReviewStatus modified +
NegativePrecedingEventReason modified +
ReactionType modified +
TranscriptionalModification modified +
CellType modified +
RNADrug modified +
SequenceOntology modified +
GroupModifiedResidue modified +
Summation modified +
SimpleEntity modified +
ReferenceTherapeutic modified +
_DeletedInstance modified +
ReplacedResidue modified +
FragmentInsertionModification modified +
PhysicalEntityCellType modified +
FragmentDeletionModification modified +
PsiMod modified +
Cell modified +
ProteinDrug modified +
Polymerisation modified +
DrugActionType modified +
PositiveRegulation modified +
GeneticallyModifiedResidue modified +
PositiveGeneExpressionRegulation modified +
Anatomy modified +
ReferenceGeneProduct modified +
FunctionalStatusType modified +
FunctionalStatus modified +
DatabaseObject modified +
Polymer modified +
InteractionEvent modified +
ReferenceRNASequence modified +
BlackBoxEvent modified +
Person modified +
CrosslinkedResidue modified +
PhysicalEntity modified +
RetractionStatus modified +
DatabaseIdentifier modified +
TranslationalModification modified +
ChemicalDrug modified +
ReferenceGroup modified +
ReferenceDatabase modified +
ReferenceMolecule modified +
NegativePrecedingEvent modified +
Pathway modified +
ControlReference modified +
GO_CellularComponent modified +
CatalystActivity modified +
Affiliation modified +
Disease modified +
InstanceEdit modified +
FrontPage modified +
ReferenceDNASequence modified +
ReactionlikeEvent modified +
Publication modified +
FragmentModification modified +
OtherEntity modified +
NegativeGeneExpressionRegulation modified +
ReferenceEntity modified +
ReferenceIsoform modified +
URL modified +
ModifiedNucleotide modified +
PathwayDiagram modified +
Event modified +
StableIdentifier modified +
Book modified +
NegativeRegulation modified +
EntityWithAccessionedSequence modified +
StableIdentifierReleaseStatus modified +
GenomeEncodedEntity modified +
AbstractModifiedResidue modified +
DeletedControlledVocabulary modified +
ControlledVocabulary modified +
CatalystActivityReference modified +
_UpdateTracker modified +
CellLineagePath modified +
Complex modified +
CandidateSet modified +
Drug modified +
Requirement modified +
ModifiedResidue modified +
IntraChainCrosslinkedResidue modified +
InterChainCrosslinkedResidue modified +
FragmentReplacedModification modified +
ReferenceSequence modified +
NonsenseMutation modified +
BlackBoxEvent created 1
ReferenceRNASequence created 1
Person created 1
CrosslinkedResidue created 1
RetractionStatus created 1
PhysicalEntity created 1
ReferenceGeneProduct created 1
FunctionalStatusType created 1
DatabaseObject created 1
FunctionalStatus created 1
Polymer created 1
InteractionEvent created 1
PositiveRegulation created 1
GeneticallyModifiedResidue created 1
DrugActionType created 1
PositiveGeneExpressionRegulation created 1
Anatomy created 1
ProteinDrug created 1
Cell created 1
Polymerisation created 1
FragmentDeletionModification created 1
PsiMod created 1
ReferenceTherapeutic created 1
ReplacedResidue created 1
_DeletedInstance created 1
PhysicalEntityCellType created 1
FragmentInsertionModification created 1
Summation created 1
GroupModifiedResidue created 1
SimpleEntity created 1
ReactionType created 1
TranscriptionalModification created 1
RNADrug created 1
CellType created 1
SequenceOntology created 1
ReviewStatus created 1
NegativePrecedingEventReason created 1
LiteratureReference created 1
ExternalOntology created 1
MarkerReference created 1
EntityFunctionalStatus created 1
CellDevelopmentStep created 1
Figure created 1
Compartment created 1
_Release created 1
FailedReaction created 1
Depolymerisation created 1
EvidenceType created 1
Reaction created 1
Taxon created 1
RegulationReference created 1
StableIdentifierHistory created 1
DefinedSet created 1
EntitySet created 1
Species created 1
_Deleted created 1
GO_MolecularFunction created 1
GO_BiologicalProcess created 1
Regulation created 1
InterChainCrosslinkedResidue created 1
FragmentReplacedModification created 1
ReferenceSequence created 1
NonsenseMutation created 1
IntraChainCrosslinkedResidue created 1
ModifiedResidue created 1
_UpdateTracker created 1
CellLineagePath created 1
CatalystActivityReference created 1
Complex created 1
CandidateSet created 1
Drug created 1
Requirement created 1
AbstractModifiedResidue created 1
GenomeEncodedEntity created 1
DeletedControlledVocabulary created 1
ControlledVocabulary created 1
ModifiedNucleotide created 1
Event created 1
PathwayDiagram created 1
StableIdentifier created 1
Book created 1
NegativeRegulation created 1
EntityWithAccessionedSequence created 1
StableIdentifierReleaseStatus created 1
ReferenceEntity created 1
ReferenceIsoform created 1
URL created 1
FragmentModification created 1
NegativeGeneExpressionRegulation created 1
OtherEntity created 1
ReactionlikeEvent created 1
Publication created 1
Disease created 1
InstanceEdit created 1
FrontPage created 1
ReferenceDNASequence created 1
GO_CellularComponent created 1
CatalystActivity created 1
Affiliation created 1
ControlReference created 1
NegativePrecedingEvent created 1
Pathway created 1
ReferenceDatabase created 1
ReferenceMolecule created 1
ReferenceGroup created 1
DatabaseIdentifier created 1
TranslationalModification created 1
ChemicalDrug created 1
Event structureModified +
Reaction structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
DefinedSet reviewed +
SimpleEntity reviewed +
EntitySet reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
Pathway reviewed +
Event reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
CellDevelopmentStep reviewed +
CellLineagePath reviewed +
Cell reviewed +
ProteinDrug reviewed +
Polymerisation reviewed +
Complex reviewed +
CandidateSet reviewed +
FailedReaction reviewed +
Depolymerisation reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
BlackBoxEvent reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
InteractionEvent reviewed +
SimpleEntity authored 1
DefinedSet authored 1
EntitySet authored 1
ChemicalDrug authored 1
OtherEntity authored 1
RNADrug authored 1
Pathway authored +
GenomeEncodedEntity authored 1
Reaction authored +
Event authored +
EntityWithAccessionedSequence authored 1
ProteinDrug authored 1
Cell authored 1
CellLineagePath authored +
CellDevelopmentStep authored +
Depolymerisation authored +
FailedReaction authored +
Drug authored 1
Polymerisation authored +
Complex authored 1
CandidateSet authored 1
ReactionlikeEvent authored +
PhysicalEntity authored 1
BlackBoxEvent authored +
InteractionEvent authored +
Polymer authored 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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