Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Pathway authored +
Event authored +
CellLineagePath authored +
DefinedSet authored 1
ChemicalDrug authored 1
EntityWithAccessionedSequence authored 1
Polymer authored 1
ProteinDrug authored 1
Complex authored 1
OtherEntity authored 1
SimpleEntity authored 1
CellDevelopmentStep authored +
Drug authored 1
RNADrug authored 1
EntitySet authored 1
Depolymerisation authored +
Polymerisation authored +
Reaction authored +
CandidateSet authored 1
Cell authored 1
GenomeEncodedEntity authored 1
PhysicalEntity authored 1
ReactionlikeEvent authored +
InteractionEvent authored +
BlackBoxEvent authored +
FailedReaction authored +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
Reaction structureModified +
CellLineagePath structureModified +
Event structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
_Deleted replacementInstances +
Depolymerisation reviewed +
Reaction reviewed +
Polymerisation reviewed +
CandidateSet reviewed +
Cell reviewed +
ReactionlikeEvent reviewed +
InteractionEvent reviewed +
PhysicalEntity reviewed +
GenomeEncodedEntity reviewed +
FailedReaction reviewed +
BlackBoxEvent reviewed +
DefinedSet reviewed +
ChemicalDrug reviewed +
Pathway reviewed +
CellLineagePath reviewed +
Event reviewed +
CellDevelopmentStep reviewed +
SimpleEntity reviewed +
Polymer reviewed +
EntityWithAccessionedSequence reviewed +
ProteinDrug reviewed +
Complex reviewed +
OtherEntity reviewed +
RNADrug reviewed +
Drug reviewed +
EntitySet reviewed +
CandidateSet edited +
Cell edited +
Depolymerisation edited +
Polymerisation edited +
Reaction edited +
FailedReaction edited +
BlackBoxEvent edited +
ReactionlikeEvent edited +
InteractionEvent edited +
PhysicalEntity edited +
GenomeEncodedEntity edited +
CellDevelopmentStep edited +
SimpleEntity edited +
Polymer edited +
EntityWithAccessionedSequence edited +
Complex edited +
ProteinDrug edited +
OtherEntity edited +
DefinedSet edited +
ChemicalDrug edited +
Pathway edited +
CellLineagePath edited +
Event edited +
EntitySet edited +
RNADrug edited +
Drug edited +
Polymerisation revised +
Depolymerisation revised +
Reaction revised +
CandidateSet revised +
Cell revised +
PhysicalEntity revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
ReactionlikeEvent revised +
BlackBoxEvent revised +
FailedReaction revised +
CellLineagePath revised +
Event revised +
Pathway revised +
ChemicalDrug revised +
DefinedSet revised +
Complex revised +
ProteinDrug revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
Polymer revised +
CellDevelopmentStep revised +
SimpleEntity revised +
Drug revised +
RNADrug revised +
EntitySet revised +
EntitySet created 1
PositiveRegulation created 1
ReferenceRNASequence created 1
ReferenceIsoform created 1
ReplacedResidue created 1
LiteratureReference created 1
Polymer created 1
PositiveGeneExpressionRegulation created 1
TranscriptionalModification created 1
BlackBoxEvent created 1
FunctionalStatus created 1
FragmentModification created 1
ExternalOntology created 1
ReactionlikeEvent created 1
Species created 1
Book created 1
PsiMod created 1
Cell created 1
ReferenceDNASequence created 1
CandidateSet created 1
_DeletedInstance created 1
ReactionType created 1
Disease created 1
GO_MolecularFunction created 1
StableIdentifierReleaseStatus created 1
GO_CellularComponent created 1
Drug created 1
RegulationReference created 1
NegativePrecedingEventReason created 1
FragmentInsertionModification created 1
EntityWithAccessionedSequence created 1
SimpleEntity created 1
Event created 1
SequenceOntology created 1
ReferenceSequence created 1
Affiliation created 1
DefinedSet created 1
ReferenceGeneProduct created 1
Figure created 1
FailedReaction created 1
FrontPage created 1
Taxon created 1
PhysicalEntity created 1
InteractionEvent created 1
CrosslinkedResidue created 1
Summation created 1
NegativeGeneExpressionRegulation created 1
ReviewStatus created 1
ControlledVocabulary created 1
URL created 1
StableIdentifier created 1
IntraChainCrosslinkedResidue created 1
ReferenceTherapeutic created 1
GroupModifiedResidue created 1
Depolymerisation created 1
TranslationalModification created 1
EvidenceType created 1
InstanceEdit created 1
StableIdentifierHistory created 1
CellType created 1
NonsenseMutation created 1
RNADrug created 1
FragmentReplacedModification created 1
Pathway created 1
_UpdateTracker created 1
ReferenceEntity created 1
Person created 1
EntityFunctionalStatus created 1
Anatomy created 1
FunctionalStatusType created 1
ModifiedNucleotide created 1
Regulation created 1
GO_BiologicalProcess created 1
DrugActionType created 1
ControlReference created 1
ReferenceDatabase created 1
_Release created 1
Polymerisation created 1
Reaction created 1
FragmentDeletionModification created 1
PhysicalEntityCellType created 1
Complex created 1
PathwayDiagram created 1
ProteinDrug created 1
OtherEntity created 1
CatalystActivity created 1
Requirement created 1
ReferenceMolecule created 1
CellDevelopmentStep created 1
InterChainCrosslinkedResidue created 1
CellLineagePath created 1
RetractionStatus created 1
ReferenceGroup created 1
ChemicalDrug created 1
MarkerReference created 1
GeneticallyModifiedResidue created 1
CatalystActivityReference created 1
DatabaseIdentifier created 1
NegativePrecedingEvent created 1
GenomeEncodedEntity created 1
_Deleted created 1
DeletedControlledVocabulary created 1
Publication created 1
AbstractModifiedResidue created 1
NegativeRegulation created 1
Compartment created 1
ModifiedResidue created 1
DatabaseObject created 1
PhysicalEntity modified +
Taxon modified +
FrontPage modified +
InteractionEvent modified +
Summation modified +
NegativeGeneExpressionRegulation modified +
CrosslinkedResidue modified +
ReferenceGeneProduct modified +
FailedReaction modified +
Figure modified +
ReferenceTherapeutic modified +
TranslationalModification modified +
Depolymerisation modified +
GroupModifiedResidue modified +
StableIdentifier modified +
ReviewStatus modified +
ControlledVocabulary modified +
URL modified +
IntraChainCrosslinkedResidue modified +
RegulationReference modified +
Drug modified +
NegativePrecedingEventReason modified +
Disease modified +
StableIdentifierReleaseStatus modified +
GO_MolecularFunction modified +
GO_CellularComponent modified +
SequenceOntology modified +
Event modified +
Affiliation modified +
DefinedSet modified +
ReferenceSequence modified +
EntityWithAccessionedSequence modified +
FragmentInsertionModification modified +
SimpleEntity modified +
FragmentModification modified +
ReactionlikeEvent modified +
ExternalOntology modified +
BlackBoxEvent modified +
FunctionalStatus modified +
_DeletedInstance modified +
ReactionType modified +
Book modified +
PsiMod modified +
Species modified +
ReferenceDNASequence modified +
Cell modified +
CandidateSet modified +
ReplacedResidue modified +
ReferenceRNASequence modified +
ReferenceIsoform modified +
PositiveRegulation modified +
EntitySet modified +
TranscriptionalModification modified +
Polymer modified +
LiteratureReference modified +
PositiveGeneExpressionRegulation modified +
GenomeEncodedEntity modified +
CatalystActivityReference modified +
NegativePrecedingEvent modified +
DatabaseIdentifier modified +
_Deleted modified +
MarkerReference modified +
GeneticallyModifiedResidue modified +
Compartment modified +
AbstractModifiedResidue modified +
NegativeRegulation modified +
DatabaseObject modified +
ModifiedResidue modified +
DeletedControlledVocabulary modified +
Publication modified +
PhysicalEntityCellType modified +
FragmentDeletionModification modified +
InterChainCrosslinkedResidue modified +
RetractionStatus modified +
CellLineagePath modified +
ChemicalDrug modified +
ReferenceGroup modified +
Requirement modified +
OtherEntity modified +
CatalystActivity modified +
PathwayDiagram modified +
ProteinDrug modified +
Complex modified +
ReferenceMolecule modified +
CellDevelopmentStep modified +
Regulation modified +
ModifiedNucleotide modified +
FunctionalStatusType modified +
ReferenceEntity modified +
Anatomy modified +
Person modified +
EntityFunctionalStatus modified +
_Release modified +
Reaction modified +
Polymerisation modified +
DrugActionType modified +
GO_BiologicalProcess modified +
ReferenceDatabase modified +
ControlReference modified +
NonsenseMutation modified +
RNADrug modified +
FragmentReplacedModification modified +
InstanceEdit modified +
EvidenceType modified +
StableIdentifierHistory modified +
CellType modified +
Pathway modified +
_UpdateTracker modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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