Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Depolymerisation authored +
SimpleEntity authored 1
PhysicalEntity authored 1
Reaction authored +
ProteinDrug authored 1
FailedReaction authored +
CellDevelopmentStep authored +
InteractionEvent authored +
Event authored +
DefinedSet authored 1
CellLineagePath authored +
CandidateSet authored 1
Polymerisation authored +
BlackBoxEvent authored +
ChemicalDrug authored 1
Complex authored 1
Cell authored 1
Polymer authored 1
EntitySet authored 1
ReactionlikeEvent authored +
Pathway authored +
EntityWithAccessionedSequence authored 1
RNADrug authored 1
OtherEntity authored 1
GenomeEncodedEntity authored 1
Drug authored 1
CellLineagePath reviewed +
DefinedSet reviewed +
InteractionEvent reviewed +
Event reviewed +
BlackBoxEvent reviewed +
Polymerisation reviewed +
CandidateSet reviewed +
PhysicalEntity reviewed +
SimpleEntity reviewed +
Depolymerisation reviewed +
CellDevelopmentStep reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
Drug reviewed +
GenomeEncodedEntity reviewed +
RNADrug reviewed +
OtherEntity reviewed +
Complex reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
Polymer reviewed +
EntitySet reviewed +
Cell reviewed +
Pathway internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
ReactionlikeEvent revised +
Polymer revised +
EntitySet revised +
Cell revised +
Complex revised +
ChemicalDrug revised +
GenomeEncodedEntity revised +
Drug revised +
RNADrug revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
Pathway revised +
CellDevelopmentStep revised +
FailedReaction revised +
ProteinDrug revised +
Reaction revised +
PhysicalEntity revised +
SimpleEntity revised +
Depolymerisation revised +
BlackBoxEvent revised +
Polymerisation revised +
CandidateSet revised +
CellLineagePath revised +
DefinedSet revised +
InteractionEvent revised +
Event revised +
SimpleEntity edited +
PhysicalEntity edited +
Depolymerisation edited +
CellDevelopmentStep edited +
Reaction edited +
ProteinDrug edited +
FailedReaction edited +
DefinedSet edited +
CellLineagePath edited +
Event edited +
InteractionEvent edited +
Polymerisation edited +
BlackBoxEvent edited +
CandidateSet edited +
Complex edited +
ChemicalDrug edited +
Polymer edited +
Cell edited +
EntitySet edited +
ReactionlikeEvent edited +
EntityWithAccessionedSequence edited +
Pathway edited +
RNADrug edited +
OtherEntity edited +
Drug edited +
GenomeEncodedEntity edited +
FailedReaction structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
Pathway structureModified +
Event structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
CellLineagePath created 1
ReplacedResidue created 1
GO_MolecularFunction created 1
FunctionalStatus created 1
ReferenceSequence created 1
Event created 1
ReviewStatus created 1
BlackBoxEvent created 1
PositiveGeneExpressionRegulation created 1
PhysicalEntity created 1
AbstractModifiedResidue created 1
Requirement created 1
StableIdentifierReleaseStatus created 1
EntityFunctionalStatus created 1
CatalystActivityReference created 1
ControlReference created 1
GenomeEncodedEntity created 1
GO_CellularComponent created 1
DeletedControlledVocabulary created 1
Complex created 1
Species created 1
InstanceEdit created 1
CatalystActivity created 1
Cell created 1
Summation created 1
NonsenseMutation created 1
PhysicalEntityCellType created 1
ReactionType created 1
DefinedSet created 1
MarkerReference created 1
Regulation created 1
PositiveRegulation created 1
TranscriptionalModification created 1
Polymerisation created 1
FrontPage created 1
CandidateSet created 1
EvidenceType created 1
CellType created 1
FragmentModification created 1
NegativePrecedingEvent created 1
Pathway created 1
GroupModifiedResidue created 1
Drug created 1
FragmentDeletionModification created 1
DrugActionType created 1
SequenceOntology created 1
StableIdentifier created 1
ReferenceRNASequence created 1
GO_BiologicalProcess created 1
Compartment created 1
ReferenceDatabase created 1
ModifiedResidue created 1
ReferenceMolecule created 1
Book created 1
URL created 1
ReferenceGroup created 1
LiteratureReference created 1
Figure created 1
DatabaseIdentifier created 1
SimpleEntity created 1
Affiliation created 1
Person created 1
RetractionStatus created 1
Depolymerisation created 1
GeneticallyModifiedResidue created 1
IntraChainCrosslinkedResidue created 1
DatabaseObject created 1
_UpdateTracker created 1
CellDevelopmentStep created 1
ReferenceEntity created 1
ProteinDrug created 1
FailedReaction created 1
ExternalOntology created 1
CrosslinkedResidue created 1
PsiMod created 1
EntityWithAccessionedSequence created 1
FunctionalStatusType created 1
RNADrug created 1
Disease created 1
RegulationReference created 1
NegativeRegulation created 1
ControlledVocabulary created 1
Taxon created 1
ChemicalDrug created 1
ReactionlikeEvent created 1
NegativeGeneExpressionRegulation created 1
InteractionEvent created 1
NegativePrecedingEventReason created 1
FragmentReplacedModification created 1
ReferenceGeneProduct created 1
ModifiedNucleotide created 1
FragmentInsertionModification created 1
ReferenceTherapeutic created 1
StableIdentifierHistory created 1
Reaction created 1
ReferenceDNASequence created 1
_Deleted created 1
Publication created 1
PathwayDiagram created 1
OtherEntity created 1
_Release created 1
ReferenceIsoform created 1
TranslationalModification created 1
_DeletedInstance created 1
InterChainCrosslinkedResidue created 1
Anatomy created 1
EntitySet created 1
Polymer created 1
_Deleted replacementInstances +
EntitySet modified +
Polymer modified +
_DeletedInstance modified +
InterChainCrosslinkedResidue modified +
Anatomy modified +
TranslationalModification modified +
PathwayDiagram modified +
OtherEntity modified +
ReferenceIsoform modified +
_Release modified +
ReferenceDNASequence modified +
Publication modified +
_Deleted modified +
StableIdentifierHistory modified +
ReferenceTherapeutic modified +
Reaction modified +
FragmentReplacedModification modified +
NegativePrecedingEventReason modified +
ModifiedNucleotide modified +
FragmentInsertionModification modified +
ReferenceGeneProduct modified +
InteractionEvent modified +
NegativeGeneExpressionRegulation modified +
ReactionlikeEvent modified +
NegativeRegulation modified +
RegulationReference modified +
ChemicalDrug modified +
Taxon modified +
ControlledVocabulary modified +
RNADrug modified +
FunctionalStatusType modified +
Disease modified +
EntityWithAccessionedSequence modified +
PsiMod modified +
IntraChainCrosslinkedResidue modified +
DatabaseObject modified +
_UpdateTracker modified +
CellDevelopmentStep modified +
CrosslinkedResidue modified +
ProteinDrug modified +
ExternalOntology modified +
ReferenceEntity modified +
FailedReaction modified +
SimpleEntity modified +
RetractionStatus modified +
Depolymerisation modified +
Person modified +
GeneticallyModifiedResidue modified +
Affiliation modified +
LiteratureReference modified +
Figure modified +
DatabaseIdentifier modified +
ReferenceGroup modified +
ModifiedResidue modified +
ReferenceMolecule modified +
URL modified +
Book modified +
ReferenceDatabase modified +
Compartment modified +
SequenceOntology modified +
ReferenceRNASequence modified +
StableIdentifier modified +
GO_BiologicalProcess modified +
Drug modified +
DrugActionType modified +
FragmentDeletionModification modified +
NegativePrecedingEvent modified +
GroupModifiedResidue modified +
Pathway modified +
FragmentModification modified +
CellType modified +
EvidenceType modified +
Polymerisation modified +
FrontPage modified +
CandidateSet modified +
DefinedSet modified +
ReactionType modified +
MarkerReference modified +
Regulation modified +
TranscriptionalModification modified +
PositiveRegulation modified +
Cell modified +
PhysicalEntityCellType modified +
NonsenseMutation modified +
Summation modified +
InstanceEdit modified +
Species modified +
Complex modified +
CatalystActivity modified +
GenomeEncodedEntity modified +
DeletedControlledVocabulary modified +
GO_CellularComponent modified +
CatalystActivityReference modified +
ControlReference modified +
Requirement modified +
EntityFunctionalStatus modified +
StableIdentifierReleaseStatus modified +
PhysicalEntity modified +
AbstractModifiedResidue modified +
PositiveGeneExpressionRegulation modified +
ReviewStatus modified +
BlackBoxEvent modified +
ReplacedResidue modified +
GO_MolecularFunction modified +
CellLineagePath modified +
Event modified +
ReferenceSequence modified +
FunctionalStatus modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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