Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReferenceSequence created 1
NegativePrecedingEvent created 1
EntityWithAccessionedSequence created 1
Affiliation created 1
LiteratureReference created 1
PsiMod created 1
PhysicalEntity created 1
ProteinDrug created 1
Event created 1
Polymerisation created 1
FragmentModification created 1
Drug created 1
CellLineagePath created 1
ReactionType created 1
Anatomy created 1
ModifiedResidue created 1
Reaction created 1
GroupModifiedResidue created 1
Summation created 1
DefinedSet created 1
ReplacedResidue created 1
_Release created 1
Polymer created 1
TranslationalModification created 1
ReviewStatus created 1
GenomeEncodedEntity created 1
ModifiedNucleotide created 1
Requirement created 1
Species created 1
PositiveRegulation created 1
ReferenceTherapeutic created 1
IntraChainCrosslinkedResidue created 1
Person created 1
SequenceOntology created 1
GO_CellularComponent created 1
CrosslinkedResidue created 1
RegulationReference created 1
NegativePrecedingEventReason created 1
Figure created 1
Taxon created 1
ControlReference created 1
DeletedControlledVocabulary created 1
TranscriptionalModification created 1
GO_MolecularFunction created 1
Pathway created 1
Disease created 1
ReferenceDNASequence created 1
AbstractModifiedResidue created 1
FragmentReplacedModification created 1
CellType created 1
ReactionlikeEvent created 1
InstanceEdit created 1
_DeletedInstance created 1
InteractionEvent created 1
FragmentInsertionModification created 1
_Deleted created 1
StableIdentifier created 1
CatalystActivity created 1
CandidateSet created 1
InterChainCrosslinkedResidue created 1
DrugActionType created 1
Compartment created 1
ReferenceMolecule created 1
StableIdentifierHistory created 1
ReferenceGeneProduct created 1
FailedReaction created 1
SimpleEntity created 1
ReferenceRNASequence created 1
ExternalOntology created 1
GO_BiologicalProcess created 1
EntityFunctionalStatus created 1
Depolymerisation created 1
FragmentDeletionModification created 1
ControlledVocabulary created 1
GeneticallyModifiedResidue created 1
FunctionalStatusType created 1
NegativeGeneExpressionRegulation created 1
ReferenceEntity created 1
CellDevelopmentStep created 1
NegativeRegulation created 1
StableIdentifierReleaseStatus created 1
MarkerReference created 1
ReferenceGroup created 1
OtherEntity created 1
ReferenceIsoform created 1
NonsenseMutation created 1
Complex created 1
Regulation created 1
Cell created 1
ChemicalDrug created 1
BlackBoxEvent created 1
_UpdateTracker created 1
Book created 1
RNADrug created 1
EvidenceType created 1
PositiveGeneExpressionRegulation created 1
RetractionStatus created 1
URL created 1
FunctionalStatus created 1
PathwayDiagram created 1
CatalystActivityReference created 1
PhysicalEntityCellType created 1
EntitySet created 1
FrontPage created 1
Publication created 1
DatabaseIdentifier created 1
ReferenceDatabase created 1
DatabaseObject created 1
ReactionlikeEvent revised +
DefinedSet revised +
OtherEntity revised +
Reaction revised +
Pathway revised +
EntitySet revised +
CellDevelopmentStep revised +
Drug revised +
CellLineagePath revised +
Event revised +
Polymerisation revised +
Depolymerisation revised +
ProteinDrug revised +
SimpleEntity revised +
PhysicalEntity revised +
FailedReaction revised +
GenomeEncodedEntity revised +
RNADrug revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
Cell revised +
ChemicalDrug revised +
CandidateSet revised +
Polymer revised +
Complex revised +
InteractionEvent revised +
Pathway authored +
Reaction authored +
DefinedSet authored 1
OtherEntity authored 1
ReactionlikeEvent authored +
Polymerisation authored +
Event authored +
CellLineagePath authored +
Drug authored 1
CellDevelopmentStep authored +
EntitySet authored 1
FailedReaction authored +
PhysicalEntity authored 1
SimpleEntity authored 1
ProteinDrug authored 1
Depolymerisation authored +
InteractionEvent authored +
Polymer authored 1
Complex authored 1
CandidateSet authored 1
Cell authored 1
BlackBoxEvent authored +
ChemicalDrug authored 1
RNADrug authored 1
EntityWithAccessionedSequence authored 1
GenomeEncodedEntity authored 1
CellLineagePath edited +
Drug edited +
CellDevelopmentStep edited +
EntitySet edited +
Event edited +
Polymerisation edited +
DefinedSet edited +
OtherEntity edited +
ReactionlikeEvent edited +
Pathway edited +
Reaction edited +
EntityWithAccessionedSequence edited +
RNADrug edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
Polymer edited +
Complex edited +
CandidateSet edited +
Cell edited +
BlackBoxEvent edited +
ChemicalDrug edited +
ProteinDrug edited +
Depolymerisation edited +
FailedReaction edited +
PhysicalEntity edited +
SimpleEntity edited +
Polymerisation internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
ReactionType modified +
Anatomy modified +
Reaction modified +
ModifiedResidue modified +
GroupModifiedResidue modified +
Summation modified +
DefinedSet modified +
ReplacedResidue modified +
_Release modified +
Polymerisation modified +
Event modified +
FragmentModification modified +
CellLineagePath modified +
Drug modified +
LiteratureReference modified +
PsiMod modified +
PhysicalEntity modified +
ProteinDrug modified +
ReferenceSequence modified +
NegativePrecedingEvent modified +
EntityWithAccessionedSequence modified +
Affiliation modified +
Pathway modified +
Disease modified +
ReferenceDNASequence modified +
AbstractModifiedResidue modified +
FragmentReplacedModification modified +
CellType modified +
ReactionlikeEvent modified +
Figure modified +
Taxon modified +
ControlReference modified +
DeletedControlledVocabulary modified +
TranscriptionalModification modified +
GO_MolecularFunction modified +
IntraChainCrosslinkedResidue modified +
Person modified +
CrosslinkedResidue modified +
SequenceOntology modified +
GO_CellularComponent modified +
RegulationReference modified +
NegativePrecedingEventReason modified +
Polymer modified +
TranslationalModification modified +
ReviewStatus modified +
Requirement modified +
ModifiedNucleotide modified +
GenomeEncodedEntity modified +
ReferenceTherapeutic modified +
Species modified +
PositiveRegulation modified +
NegativeRegulation modified +
StableIdentifierReleaseStatus modified +
MarkerReference modified +
ReferenceGroup modified +
OtherEntity modified +
ReferenceIsoform modified +
NonsenseMutation modified +
GeneticallyModifiedResidue modified +
ControlledVocabulary modified +
FragmentDeletionModification modified +
NegativeGeneExpressionRegulation modified +
FunctionalStatusType modified +
CellDevelopmentStep modified +
ReferenceEntity modified +
FailedReaction modified +
ExternalOntology modified +
SimpleEntity modified +
ReferenceRNASequence modified +
GO_BiologicalProcess modified +
EntityFunctionalStatus modified +
Depolymerisation modified +
InteractionEvent modified +
_DeletedInstance modified +
InstanceEdit modified +
FragmentInsertionModification modified +
_Deleted modified +
CandidateSet modified +
StableIdentifier modified +
CatalystActivity modified +
InterChainCrosslinkedResidue modified +
Compartment modified +
DrugActionType modified +
ReferenceMolecule modified +
StableIdentifierHistory modified +
ReferenceGeneProduct modified +
FrontPage modified +
Publication modified +
DatabaseIdentifier modified +
DatabaseObject modified +
ReferenceDatabase modified +
CatalystActivityReference modified +
PhysicalEntityCellType modified +
EntitySet modified +
PositiveGeneExpressionRegulation modified +
RetractionStatus modified +
FunctionalStatus modified +
URL modified +
PathwayDiagram modified +
Complex modified +
Regulation modified +
_UpdateTracker modified +
ChemicalDrug modified +
BlackBoxEvent modified +
Cell modified +
RNADrug modified +
Book modified +
EvidenceType modified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
Event structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
Reaction structureModified +
FailedReaction structureModified +
_Deleted replacementInstances +
BlackBoxEvent reviewed +
Cell reviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
Complex reviewed +
Polymer reviewed +
InteractionEvent reviewed +
GenomeEncodedEntity reviewed +
EntityWithAccessionedSequence reviewed +
RNADrug reviewed +
SimpleEntity reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
Depolymerisation reviewed +
ProteinDrug reviewed +
Polymerisation reviewed +
Event reviewed +
EntitySet reviewed +
CellDevelopmentStep reviewed +
CellLineagePath reviewed +
Drug reviewed +
Reaction reviewed +
Pathway reviewed +
ReactionlikeEvent reviewed +
DefinedSet reviewed +
OtherEntity reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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