Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Cell edited +
CellLineagePath edited +
SimpleEntity edited +
Pathway edited +
PhysicalEntity edited +
DefinedSet edited +
Polymerisation edited +
Drug edited +
Reaction edited +
Depolymerisation edited +
CandidateSet edited +
Polymer edited +
EntitySet edited +
ChemicalDrug edited +
CellDevelopmentStep edited +
FailedReaction edited +
OtherEntity edited +
InteractionEvent edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
Complex edited +
Event edited +
BlackBoxEvent edited +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
RNADrug edited +
Depolymerisation internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath authored +
SimpleEntity authored 1
Pathway authored +
PhysicalEntity authored 1
Cell authored 1
Polymerisation authored +
DefinedSet authored 1
Drug authored 1
CandidateSet authored 1
Depolymerisation authored +
Reaction authored +
ChemicalDrug authored 1
Polymer authored 1
EntitySet authored 1
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
InteractionEvent authored +
CellDevelopmentStep authored +
OtherEntity authored 1
FailedReaction authored +
Event authored +
BlackBoxEvent authored +
ProteinDrug authored 1
Complex authored 1
EntityWithAccessionedSequence authored 1
RNADrug authored 1
FailedReaction structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
Event structureModified +
Depolymerisation structureModified +
Reaction structureModified +
_Deleted replacementInstances +
Disease modified +
EntityFunctionalStatus modified +
Complex modified +
Summation modified +
EvidenceType modified +
ReviewStatus modified +
FrontPage modified +
ReferenceGeneProduct modified +
NegativeRegulation modified +
Cell modified +
_DeletedInstance modified +
CellLineagePath modified +
FragmentReplacedModification modified +
DeletedControlledVocabulary modified +
ReferenceRNASequence modified +
FragmentInsertionModification modified +
_Release modified +
ReferenceTherapeutic modified +
ReactionType modified +
Reaction modified +
PathwayDiagram modified +
Species modified +
MarkerReference modified +
Person modified +
ModifiedResidue modified +
ChemicalDrug modified +
CellType modified +
Regulation modified +
PositiveGeneExpressionRegulation modified +
GenomeEncodedEntity modified +
InteractionEvent modified +
ReactionlikeEvent modified +
PsiMod modified +
GO_BiologicalProcess modified +
GroupModifiedResidue modified +
BlackBoxEvent modified +
ReferenceDNASequence modified +
Anatomy modified +
URL modified +
Taxon modified +
InstanceEdit modified +
NegativePrecedingEvent modified +
ReferenceMolecule modified +
IntraChainCrosslinkedResidue modified +
Affiliation modified +
PhysicalEntity modified +
DefinedSet modified +
FragmentDeletionModification modified +
ControlledVocabulary modified +
CatalystActivityReference modified +
Requirement modified +
FunctionalStatusType modified +
CandidateSet modified +
Drug modified +
NonsenseMutation modified +
ReferenceDatabase modified +
StableIdentifier modified +
EntitySet modified +
PhysicalEntityCellType modified +
ReplacedResidue modified +
OtherEntity modified +
FailedReaction modified +
NegativePrecedingEventReason modified +
Book modified +
FragmentModification modified +
Figure modified +
ProteinDrug modified +
StableIdentifierReleaseStatus modified +
ReferenceIsoform modified +
ModifiedNucleotide modified +
ReferenceGroup modified +
ExternalOntology modified +
GO_MolecularFunction modified +
CatalystActivity modified +
PositiveRegulation modified +
RetractionStatus modified +
Pathway modified +
TranscriptionalModification modified +
Publication modified +
AbstractModifiedResidue modified +
NegativeGeneExpressionRegulation modified +
DatabaseObject modified +
GeneticallyModifiedResidue modified +
CrosslinkedResidue modified +
Polymer modified +
ControlReference modified +
DrugActionType modified +
_Deleted modified +
CellDevelopmentStep modified +
DatabaseIdentifier modified +
TranslationalModification modified +
Event modified +
EntityWithAccessionedSequence modified +
GO_CellularComponent modified +
ReferenceSequence modified +
InterChainCrosslinkedResidue modified +
RNADrug modified +
LiteratureReference modified +
FunctionalStatus modified +
SimpleEntity modified +
SequenceOntology modified +
Polymerisation modified +
Depolymerisation modified +
RegulationReference modified +
ReferenceEntity modified +
StableIdentifierHistory modified +
Compartment modified +
_UpdateTracker modified +
EntityWithAccessionedSequence reviewed +
RNADrug reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
ReactionlikeEvent reviewed +
FailedReaction reviewed +
OtherEntity reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
BlackBoxEvent reviewed +
Event reviewed +
Complex reviewed +
Depolymerisation reviewed +
CandidateSet reviewed +
Reaction reviewed +
Drug reviewed +
ChemicalDrug reviewed +
EntitySet reviewed +
Polymer reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
SimpleEntity reviewed +
CellLineagePath reviewed +
Cell reviewed +
Polymerisation reviewed +
DefinedSet reviewed +
Cell revised +
CellLineagePath revised +
PhysicalEntity revised +
Pathway revised +
SimpleEntity revised +
DefinedSet revised +
Polymerisation revised +
Drug revised +
Depolymerisation revised +
CandidateSet revised +
Reaction revised +
Polymer revised +
EntitySet revised +
ChemicalDrug revised +
CellDevelopmentStep revised +
FailedReaction revised +
OtherEntity revised +
GenomeEncodedEntity revised +
ReactionlikeEvent revised +
InteractionEvent revised +
Complex revised +
Event revised +
ProteinDrug revised +
BlackBoxEvent revised +
EntityWithAccessionedSequence revised +
RNADrug revised +
RetractionStatus created 1
PositiveRegulation created 1
Pathway created 1
TranscriptionalModification created 1
Publication created 1
AbstractModifiedResidue created 1
DatabaseObject created 1
NegativeGeneExpressionRegulation created 1
Polymer created 1
CrosslinkedResidue created 1
GeneticallyModifiedResidue created 1
DrugActionType created 1
ControlReference created 1
FailedReaction created 1
OtherEntity created 1
NegativePrecedingEventReason created 1
Book created 1
Figure created 1
FragmentModification created 1
ProteinDrug created 1
ReferenceGroup created 1
ReferenceIsoform created 1
ModifiedNucleotide created 1
StableIdentifierReleaseStatus created 1
ExternalOntology created 1
CatalystActivity created 1
GO_MolecularFunction created 1
FunctionalStatus created 1
SequenceOntology created 1
SimpleEntity created 1
Polymerisation created 1
Depolymerisation created 1
RegulationReference created 1
Compartment created 1
ReferenceEntity created 1
StableIdentifierHistory created 1
_UpdateTracker created 1
CellDevelopmentStep created 1
_Deleted created 1
DatabaseIdentifier created 1
TranslationalModification created 1
Event created 1
GO_CellularComponent created 1
EntityWithAccessionedSequence created 1
ReferenceSequence created 1
InterChainCrosslinkedResidue created 1
LiteratureReference created 1
RNADrug created 1
_DeletedInstance created 1
Cell created 1
NegativeRegulation created 1
CellLineagePath created 1
DeletedControlledVocabulary created 1
ReferenceRNASequence created 1
FragmentReplacedModification created 1
ReactionType created 1
ReferenceTherapeutic created 1
_Release created 1
FragmentInsertionModification created 1
PathwayDiagram created 1
Species created 1
MarkerReference created 1
Reaction created 1
Person created 1
ModifiedResidue created 1
CellType created 1
ChemicalDrug created 1
Disease created 1
EntityFunctionalStatus created 1
Complex created 1
Summation created 1
EvidenceType created 1
ReviewStatus created 1
ReferenceGeneProduct created 1
FrontPage created 1
IntraChainCrosslinkedResidue created 1
Affiliation created 1
PhysicalEntity created 1
ControlledVocabulary created 1
FragmentDeletionModification created 1
DefinedSet created 1
Requirement created 1
CatalystActivityReference created 1
Drug created 1
CandidateSet created 1
FunctionalStatusType created 1
ReferenceDatabase created 1
NonsenseMutation created 1
StableIdentifier created 1
EntitySet created 1
ReplacedResidue created 1
PhysicalEntityCellType created 1
Regulation created 1
PsiMod created 1
InteractionEvent created 1
GenomeEncodedEntity created 1
PositiveGeneExpressionRegulation created 1
ReactionlikeEvent created 1
GroupModifiedResidue created 1
GO_BiologicalProcess created 1
BlackBoxEvent created 1
Anatomy created 1
ReferenceDNASequence created 1
URL created 1
Taxon created 1
InstanceEdit created 1
NegativePrecedingEvent created 1
ReferenceMolecule created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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