Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
DatabaseIdentifier modified +
LiteratureReference modified +
GeneticallyModifiedResidue modified +
ControlledVocabulary modified +
EntityWithAccessionedSequence modified +
ReferenceMolecule modified +
PsiMod modified +
InteractionEvent modified +
CrosslinkedResidue modified +
Affiliation modified +
Polymerisation modified +
ReferenceDatabase modified +
Regulation modified +
InterChainCrosslinkedResidue modified +
FunctionalStatusType modified +
FragmentDeletionModification modified +
GO_BiologicalProcess modified +
IntraChainCrosslinkedResidue modified +
Compartment modified +
Drug modified +
TranslationalModification modified +
Depolymerisation modified +
GO_MolecularFunction modified +
_UpdateTracker modified +
Pathway modified +
Event modified +
ChemicalDrug modified +
URL modified +
PhysicalEntityCellType modified +
StableIdentifierReleaseStatus modified +
FragmentReplacedModification modified +
NegativePrecedingEventReason modified +
Disease modified +
DrugActionType modified +
Summation modified +
NegativeRegulation modified +
ReferenceTherapeutic modified +
SimpleEntity modified +
FunctionalStatus modified +
ReplacedResidue modified +
ReviewStatus modified +
FragmentInsertionModification modified +
NonsenseMutation modified +
CatalystActivityReference modified +
ReactionlikeEvent modified +
ReferenceIsoform modified +
CandidateSet modified +
EntityFunctionalStatus modified +
NegativePrecedingEvent modified +
CellDevelopmentStep modified +
Requirement modified +
StableIdentifierHistory modified +
BlackBoxEvent modified +
Complex modified +
_Release modified +
Cell modified +
ExternalOntology modified +
PathwayDiagram modified +
PositiveRegulation modified +
Publication modified +
CellType modified +
FrontPage modified +
_DeletedInstance modified +
ReferenceEntity modified +
EntitySet modified +
Anatomy modified +
ReferenceDNASequence modified +
ReferenceGroup modified +
EvidenceType modified +
PhysicalEntity modified +
ModifiedResidue modified +
MarkerReference modified +
SequenceOntology modified +
Polymer modified +
GenomeEncodedEntity modified +
ReferenceGeneProduct modified +
RetractionStatus modified +
PositiveGeneExpressionRegulation modified +
TranscriptionalModification modified +
ModifiedNucleotide modified +
DeletedControlledVocabulary modified +
DefinedSet modified +
ProteinDrug modified +
InstanceEdit modified +
DatabaseObject modified +
Species modified +
Reaction modified +
ReactionType modified +
Figure modified +
Person modified +
OtherEntity modified +
RegulationReference modified +
StableIdentifier modified +
AbstractModifiedResidue modified +
FragmentModification modified +
GroupModifiedResidue modified +
FailedReaction modified +
ControlReference modified +
CellLineagePath modified +
Book modified +
GO_CellularComponent modified +
ReferenceSequence modified +
_Deleted modified +
ReferenceRNASequence modified +
CatalystActivity modified +
Taxon modified +
NegativeGeneExpressionRegulation modified +
RNADrug modified +
Depolymerisation revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
Drug revised +
GenomeEncodedEntity revised +
Polymer revised +
BlackBoxEvent revised +
ChemicalDrug revised +
Event revised +
Pathway revised +
Complex revised +
RNADrug revised +
Cell revised +
Reaction revised +
ProteinDrug revised +
DefinedSet revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
SimpleEntity revised +
ReactionlikeEvent revised +
Polymerisation revised +
OtherEntity revised +
CellLineagePath revised +
EntitySet revised +
FailedReaction revised +
CandidateSet revised +
RNADrug edited +
Complex edited +
Pathway edited +
Event edited +
ChemicalDrug edited +
BlackBoxEvent edited +
Polymer edited +
GenomeEncodedEntity edited +
Drug edited +
Depolymerisation edited +
CellDevelopmentStep edited +
PhysicalEntity edited +
FailedReaction edited +
CandidateSet edited +
EntitySet edited +
CellLineagePath edited +
OtherEntity edited +
Polymerisation edited +
ReactionlikeEvent edited +
SimpleEntity edited +
EntityWithAccessionedSequence edited +
InteractionEvent edited +
ProteinDrug edited +
DefinedSet edited +
Reaction edited +
Cell edited +
Reaction structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
Event structureModified +
Polymerisation structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Reaction reviewed +
Cell reviewed +
DefinedSet reviewed +
ProteinDrug reviewed +
SimpleEntity reviewed +
InteractionEvent reviewed +
EntityWithAccessionedSequence reviewed +
Polymerisation reviewed +
OtherEntity reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
FailedReaction reviewed +
CellLineagePath reviewed +
EntitySet reviewed +
Drug reviewed +
Depolymerisation reviewed +
CellDevelopmentStep reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
Event reviewed +
Pathway reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
RNADrug reviewed +
Complex reviewed +
_Deleted replacementInstances +
OtherEntity authored 1
Polymerisation authored +
ReactionlikeEvent authored +
FailedReaction authored +
CandidateSet authored 1
EntitySet authored 1
CellLineagePath authored +
ProteinDrug authored 1
DefinedSet authored 1
Reaction authored +
Cell authored 1
SimpleEntity authored 1
EntityWithAccessionedSequence authored 1
InteractionEvent authored +
Pathway authored +
Event authored +
ChemicalDrug authored 1
BlackBoxEvent authored +
RNADrug authored 1
Complex authored 1
Drug authored 1
Depolymerisation authored +
PhysicalEntity authored 1
CellDevelopmentStep authored +
Polymer authored 1
GenomeEncodedEntity authored 1
NegativePrecedingEvent created 1
CellDevelopmentStep created 1
Requirement created 1
BlackBoxEvent created 1
StableIdentifierHistory created 1
Complex created 1
NegativeRegulation created 1
ReferenceTherapeutic created 1
SimpleEntity created 1
FunctionalStatus created 1
ReplacedResidue created 1
FragmentInsertionModification created 1
ReviewStatus created 1
NonsenseMutation created 1
CatalystActivityReference created 1
ReactionlikeEvent created 1
CandidateSet created 1
EntityFunctionalStatus created 1
ReferenceIsoform created 1
Drug created 1
TranslationalModification created 1
Depolymerisation created 1
GO_MolecularFunction created 1
_UpdateTracker created 1
Pathway created 1
Event created 1
ChemicalDrug created 1
URL created 1
PhysicalEntityCellType created 1
FragmentReplacedModification created 1
StableIdentifierReleaseStatus created 1
NegativePrecedingEventReason created 1
Disease created 1
DrugActionType created 1
Summation created 1
DatabaseIdentifier created 1
LiteratureReference created 1
GeneticallyModifiedResidue created 1
ControlledVocabulary created 1
EntityWithAccessionedSequence created 1
ReferenceMolecule created 1
PsiMod created 1
InteractionEvent created 1
CrosslinkedResidue created 1
Affiliation created 1
Polymerisation created 1
ReferenceDatabase created 1
Regulation created 1
FunctionalStatusType created 1
InterChainCrosslinkedResidue created 1
FragmentDeletionModification created 1
IntraChainCrosslinkedResidue created 1
GO_BiologicalProcess created 1
Compartment created 1
Book created 1
GO_CellularComponent created 1
ReferenceSequence created 1
_Deleted created 1
CatalystActivity created 1
ReferenceRNASequence created 1
Taxon created 1
NegativeGeneExpressionRegulation created 1
RNADrug created 1
ProteinDrug created 1
InstanceEdit created 1
Species created 1
DefinedSet created 1
DatabaseObject created 1
Reaction created 1
ReactionType created 1
Person created 1
Figure created 1
OtherEntity created 1
StableIdentifier created 1
RegulationReference created 1
GroupModifiedResidue created 1
FailedReaction created 1
AbstractModifiedResidue created 1
FragmentModification created 1
CellLineagePath created 1
ControlReference created 1
Anatomy created 1
ReferenceGroup created 1
ReferenceDNASequence created 1
EvidenceType created 1
ModifiedResidue created 1
PhysicalEntity created 1
MarkerReference created 1
SequenceOntology created 1
Polymer created 1
GenomeEncodedEntity created 1
ReferenceGeneProduct created 1
PositiveGeneExpressionRegulation created 1
RetractionStatus created 1
TranscriptionalModification created 1
ModifiedNucleotide created 1
DeletedControlledVocabulary created 1
Cell created 1
_Release created 1
ExternalOntology created 1
PathwayDiagram created 1
PositiveRegulation created 1
Publication created 1
FrontPage created 1
CellType created 1
_DeletedInstance created 1
EntitySet created 1
ReferenceEntity created 1
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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