Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
SequenceOntology modified +
ModifiedNucleotide modified +
NegativeRegulation modified +
ReferenceDNASequence modified +
Affiliation modified +
CatalystActivityReference modified +
Publication modified +
DefinedSet modified +
ChemicalDrug modified +
DatabaseIdentifier modified +
GroupModifiedResidue modified +
PositiveRegulation modified +
Polymerisation modified +
GenomeEncodedEntity modified +
Polymer modified +
StableIdentifier modified +
CellDevelopmentStep modified +
FragmentModification modified +
ReferenceGeneProduct modified +
EntityFunctionalStatus modified +
StableIdentifierReleaseStatus modified +
PhysicalEntityCellType modified +
ModifiedResidue modified +
_Release modified +
DeletedControlledVocabulary modified +
EntitySet modified +
NegativePrecedingEvent modified +
ReactionType modified +
FragmentDeletionModification modified +
Drug modified +
ReferenceTherapeutic modified +
FunctionalStatusType modified +
GO_CellularComponent modified +
Disease modified +
GO_BiologicalProcess modified +
NonsenseMutation modified +
Reaction modified +
DatabaseObject modified +
Cell modified +
ReferenceGroup modified +
SimpleEntity modified +
ReferenceRNASequence modified +
Depolymerisation modified +
CatalystActivity modified +
EntityWithAccessionedSequence modified +
FrontPage modified +
InteractionEvent modified +
MarkerReference modified +
InstanceEdit modified +
Requirement modified +
_DeletedInstance modified +
Compartment modified +
URL modified +
IntraChainCrosslinkedResidue modified +
NegativeGeneExpressionRegulation modified +
BlackBoxEvent modified +
RegulationReference modified +
EvidenceType modified +
ReplacedResidue modified +
ControlledVocabulary modified +
ExternalOntology modified +
CrosslinkedResidue modified +
Taxon modified +
FragmentInsertionModification modified +
CellType modified +
ReactionlikeEvent modified +
FailedReaction modified +
FunctionalStatus modified +
PsiMod modified +
OtherEntity modified +
RetractionStatus modified +
RNADrug modified +
ReviewStatus modified +
TranslationalModification modified +
CandidateSet modified +
Book modified +
Anatomy modified +
InterChainCrosslinkedResidue modified +
Figure modified +
LiteratureReference modified +
Event modified +
StableIdentifierHistory modified +
DrugActionType modified +
ReferenceIsoform modified +
Regulation modified +
ProteinDrug modified +
NegativePrecedingEventReason modified +
ReferenceEntity modified +
CellLineagePath modified +
ReferenceMolecule modified +
_UpdateTracker modified +
Summation modified +
Species modified +
ReferenceSequence modified +
Pathway modified +
Person modified +
PhysicalEntity modified +
PathwayDiagram modified +
ReferenceDatabase modified +
ControlReference modified +
PositiveGeneExpressionRegulation modified +
Complex modified +
FragmentReplacedModification modified +
AbstractModifiedResidue modified +
GeneticallyModifiedResidue modified +
_Deleted modified +
GO_MolecularFunction modified +
TranscriptionalModification modified +
NegativeRegulation created 1
SequenceOntology created 1
ModifiedNucleotide created 1
Publication created 1
DefinedSet created 1
Affiliation created 1
ReferenceDNASequence created 1
CatalystActivityReference created 1
GenomeEncodedEntity created 1
Polymerisation created 1
Polymer created 1
GroupModifiedResidue created 1
DatabaseIdentifier created 1
ChemicalDrug created 1
PositiveRegulation created 1
CellDevelopmentStep created 1
FragmentModification created 1
StableIdentifier created 1
ReferenceGeneProduct created 1
PhysicalEntityCellType created 1
StableIdentifierReleaseStatus created 1
EntityFunctionalStatus created 1
ModifiedResidue created 1
DeletedControlledVocabulary created 1
EntitySet created 1
_Release created 1
ReferenceTherapeutic created 1
GO_CellularComponent created 1
FunctionalStatusType created 1
FragmentDeletionModification created 1
Drug created 1
NegativePrecedingEvent created 1
ReactionType created 1
ReferenceGroup created 1
SimpleEntity created 1
ReferenceRNASequence created 1
Depolymerisation created 1
NonsenseMutation created 1
Reaction created 1
GO_BiologicalProcess created 1
Disease created 1
Cell created 1
DatabaseObject created 1
MarkerReference created 1
InstanceEdit created 1
FrontPage created 1
InteractionEvent created 1
Compartment created 1
_DeletedInstance created 1
URL created 1
IntraChainCrosslinkedResidue created 1
Requirement created 1
CatalystActivity created 1
EntityWithAccessionedSequence created 1
CrosslinkedResidue created 1
Taxon created 1
ControlledVocabulary created 1
ExternalOntology created 1
BlackBoxEvent created 1
RegulationReference created 1
NegativeGeneExpressionRegulation created 1
ReplacedResidue created 1
EvidenceType created 1
PsiMod created 1
RetractionStatus created 1
OtherEntity created 1
ReactionlikeEvent created 1
FailedReaction created 1
CellType created 1
FragmentInsertionModification created 1
FunctionalStatus created 1
Anatomy created 1
InterChainCrosslinkedResidue created 1
Book created 1
CandidateSet created 1
LiteratureReference created 1
Figure created 1
ReviewStatus created 1
RNADrug created 1
TranslationalModification created 1
Regulation created 1
ProteinDrug created 1
Event created 1
ReferenceIsoform created 1
DrugActionType created 1
StableIdentifierHistory created 1
ReferenceMolecule created 1
Species created 1
Summation created 1
_UpdateTracker created 1
NegativePrecedingEventReason created 1
ReferenceEntity created 1
CellLineagePath created 1
PathwayDiagram created 1
ReferenceDatabase created 1
Person created 1
PhysicalEntity created 1
Pathway created 1
ReferenceSequence created 1
_Deleted created 1
TranscriptionalModification created 1
GO_MolecularFunction created 1
FragmentReplacedModification created 1
AbstractModifiedResidue created 1
ControlReference created 1
Complex created 1
PositiveGeneExpressionRegulation created 1
GeneticallyModifiedResidue created 1
EntityWithAccessionedSequence reviewed +
Event reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
CellLineagePath reviewed +
EntitySet reviewed +
BlackBoxEvent reviewed +
DefinedSet reviewed +
Pathway reviewed +
PhysicalEntity reviewed +
Drug reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
FailedReaction reviewed +
Polymer reviewed +
OtherEntity reviewed +
Polymerisation reviewed +
GenomeEncodedEntity reviewed +
Cell reviewed +
RNADrug reviewed +
Complex reviewed +
Reaction reviewed +
SimpleEntity reviewed +
Depolymerisation reviewed +
CandidateSet reviewed +
CellDevelopmentStep reviewed +
_Deleted replacementInstances +
CellDevelopmentStep edited +
CandidateSet edited +
SimpleEntity edited +
Depolymerisation edited +
Reaction edited +
RNADrug edited +
Complex edited +
Cell edited +
GenomeEncodedEntity edited +
Polymerisation edited +
OtherEntity edited +
Polymer edited +
FailedReaction edited +
ReactionlikeEvent edited +
ChemicalDrug edited +
PhysicalEntity edited +
Drug edited +
Pathway edited +
DefinedSet edited +
BlackBoxEvent edited +
EntitySet edited +
CellLineagePath edited +
InteractionEvent edited +
ProteinDrug edited +
Event edited +
EntityWithAccessionedSequence edited +
Depolymerisation authored +
SimpleEntity authored 1
CandidateSet authored 1
CellDevelopmentStep authored +
Cell authored 1
RNADrug authored 1
Complex authored 1
Reaction authored +
OtherEntity authored 1
Polymer authored 1
Polymerisation authored +
GenomeEncodedEntity authored 1
Pathway authored +
Drug authored 1
PhysicalEntity authored 1
ChemicalDrug authored 1
FailedReaction authored +
ReactionlikeEvent authored +
DefinedSet authored 1
CellLineagePath authored +
EntitySet authored 1
BlackBoxEvent authored +
ProteinDrug authored 1
InteractionEvent authored +
EntityWithAccessionedSequence authored 1
Event authored +
CellLineagePath internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
DefinedSet revised +
CellLineagePath revised +
EntitySet revised +
BlackBoxEvent revised +
ProteinDrug revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
Event revised +
Depolymerisation revised +
SimpleEntity revised +
CandidateSet revised +
CellDevelopmentStep revised +
Cell revised +
RNADrug revised +
Complex revised +
Reaction revised +
OtherEntity revised +
Polymer revised +
Polymerisation revised +
GenomeEncodedEntity revised +
Pathway revised +
Drug revised +
PhysicalEntity revised +
ChemicalDrug revised +
ReactionlikeEvent revised +
FailedReaction revised +
Polymerisation structureModified +
InteractionEvent structureModified +
Pathway structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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