Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Reaction edited +
FailedReaction edited +
Polymerisation edited +
DefinedSet edited +
Depolymerisation edited +
Pathway edited +
Event edited +
GenomeEncodedEntity edited +
Drug edited +
Complex edited +
OtherEntity edited +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
RNADrug edited +
SimpleEntity edited +
ChemicalDrug edited +
Polymer edited +
EntitySet edited +
Cell edited +
ProteinDrug edited +
CellLineagePath edited +
BlackBoxEvent edited +
InteractionEvent edited +
CellDevelopmentStep edited +
CandidateSet edited +
PhysicalEntity edited +
TranslationalModification modified +
ReferenceDatabase modified +
ReferenceEntity modified +
ReactionlikeEvent modified +
TranscriptionalModification modified +
DatabaseObject modified +
ExternalOntology modified +
Drug modified +
FunctionalStatusType modified +
EntityFunctionalStatus modified +
ModifiedResidue modified +
Taxon modified +
StableIdentifierReleaseStatus modified +
Polymerisation modified +
DefinedSet modified +
RegulationReference modified +
_Deleted modified +
PsiMod modified +
CatalystActivityReference modified +
Anatomy modified +
ReactionType modified +
GO_CellularComponent modified +
CandidateSet modified +
PositiveGeneExpressionRegulation modified +
Affiliation modified +
ReferenceTherapeutic modified +
Cell modified +
ReferenceSequence modified +
Book modified +
CellType modified +
ControlReference modified +
Polymer modified +
PhysicalEntityCellType modified +
FrontPage modified +
Regulation modified +
ChemicalDrug modified +
ReferenceGeneProduct modified +
ModifiedNucleotide modified +
Complex modified +
Publication modified +
Figure modified +
NegativePrecedingEventReason modified +
GO_BiologicalProcess modified +
EvidenceType modified +
FunctionalStatus modified +
URL modified +
DrugActionType modified +
FragmentModification modified +
GeneticallyModifiedResidue modified +
ProteinDrug modified +
FragmentDeletionModification modified +
ReferenceDNASequence modified +
Person modified +
DatabaseIdentifier modified +
NegativeGeneExpressionRegulation modified +
SimpleEntity modified +
LiteratureReference modified +
NegativePrecedingEvent modified +
Summation modified +
Species modified +
NegativeRegulation modified +
Disease modified +
MarkerReference modified +
EntityWithAccessionedSequence modified +
ReferenceRNASequence modified +
OtherEntity modified +
PositiveRegulation modified +
AbstractModifiedResidue modified +
Depolymerisation modified +
GO_MolecularFunction modified +
Requirement modified +
ReplacedResidue modified +
StableIdentifierHistory modified +
SequenceOntology modified +
ReferenceGroup modified +
ControlledVocabulary modified +
_Release modified +
PhysicalEntity modified +
InteractionEvent modified +
DeletedControlledVocabulary modified +
CellDevelopmentStep modified +
BlackBoxEvent modified +
ReferenceIsoform modified +
PathwayDiagram modified +
StableIdentifier modified +
GroupModifiedResidue modified +
RNADrug modified +
NonsenseMutation modified +
Event modified +
GenomeEncodedEntity modified +
Compartment modified +
_UpdateTracker modified +
_DeletedInstance modified +
Pathway modified +
ReferenceMolecule modified +
Reaction modified +
FailedReaction modified +
IntraChainCrosslinkedResidue modified +
CatalystActivity modified +
FragmentReplacedModification modified +
InstanceEdit modified +
ReviewStatus modified +
InterChainCrosslinkedResidue modified +
CellLineagePath modified +
EntitySet modified +
CrosslinkedResidue modified +
FragmentInsertionModification modified +
RetractionStatus modified +
Figure created 1
GO_BiologicalProcess created 1
NegativePrecedingEventReason created 1
ReferenceGeneProduct created 1
ModifiedNucleotide created 1
Complex created 1
Publication created 1
ChemicalDrug created 1
DatabaseIdentifier created 1
ProteinDrug created 1
GeneticallyModifiedResidue created 1
FragmentDeletionModification created 1
ReferenceDNASequence created 1
Person created 1
URL created 1
DrugActionType created 1
FragmentModification created 1
FunctionalStatus created 1
EvidenceType created 1
StableIdentifierReleaseStatus created 1
Taxon created 1
DefinedSet created 1
Polymerisation created 1
Drug created 1
FunctionalStatusType created 1
EntityFunctionalStatus created 1
ModifiedResidue created 1
ReactionlikeEvent created 1
ReferenceEntity created 1
DatabaseObject created 1
TranscriptionalModification created 1
ExternalOntology created 1
ReferenceDatabase created 1
TranslationalModification created 1
Polymer created 1
PhysicalEntityCellType created 1
ControlReference created 1
FrontPage created 1
Regulation created 1
ReferenceTherapeutic created 1
Book created 1
ReferenceSequence created 1
Cell created 1
CellType created 1
CandidateSet created 1
GO_CellularComponent created 1
Affiliation created 1
PositiveGeneExpressionRegulation created 1
RegulationReference created 1
PsiMod created 1
_Deleted created 1
CatalystActivityReference created 1
Anatomy created 1
ReactionType created 1
ReferenceMolecule created 1
FailedReaction created 1
Reaction created 1
Event created 1
GenomeEncodedEntity created 1
_DeletedInstance created 1
Compartment created 1
_UpdateTracker created 1
Pathway created 1
NonsenseMutation created 1
StableIdentifier created 1
RNADrug created 1
GroupModifiedResidue created 1
CrosslinkedResidue created 1
RetractionStatus created 1
FragmentInsertionModification created 1
CellLineagePath created 1
EntitySet created 1
ReviewStatus created 1
InterChainCrosslinkedResidue created 1
IntraChainCrosslinkedResidue created 1
CatalystActivity created 1
InstanceEdit created 1
FragmentReplacedModification created 1
SequenceOntology created 1
StableIdentifierHistory created 1
AbstractModifiedResidue created 1
GO_MolecularFunction created 1
Depolymerisation created 1
Requirement created 1
ReplacedResidue created 1
NegativePrecedingEvent created 1
Summation created 1
Species created 1
Disease created 1
NegativeRegulation created 1
OtherEntity created 1
EntityWithAccessionedSequence created 1
MarkerReference created 1
PositiveRegulation created 1
ReferenceRNASequence created 1
NegativeGeneExpressionRegulation created 1
SimpleEntity created 1
LiteratureReference created 1
ReferenceIsoform created 1
PathwayDiagram created 1
BlackBoxEvent created 1
PhysicalEntity created 1
InteractionEvent created 1
DeletedControlledVocabulary created 1
CellDevelopmentStep created 1
ReferenceGroup created 1
ControlledVocabulary created 1
_Release created 1
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Event structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Pathway structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
Reaction structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
CandidateSet reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
CellDevelopmentStep reviewed +
Polymer reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
BlackBoxEvent reviewed +
Cell reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
Complex reviewed +
EntityWithAccessionedSequence reviewed +
OtherEntity reviewed +
ChemicalDrug reviewed +
SimpleEntity reviewed +
RNADrug reviewed +
Reaction reviewed +
DefinedSet reviewed +
FailedReaction reviewed +
Polymerisation reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
Drug reviewed +
Depolymerisation reviewed +
Pathway reviewed +
Polymer authored 1
ProteinDrug authored 1
CellLineagePath authored +
BlackBoxEvent authored +
EntitySet authored 1
Cell authored 1
CandidateSet authored 1
PhysicalEntity authored 1
InteractionEvent authored +
CellDevelopmentStep authored +
DefinedSet authored 1
Reaction authored +
FailedReaction authored +
Polymerisation authored +
Event authored +
Drug authored 1
GenomeEncodedEntity authored 1
Depolymerisation authored +
Pathway authored +
ReactionlikeEvent authored +
Complex authored 1
EntityWithAccessionedSequence authored 1
OtherEntity authored 1
ChemicalDrug authored 1
SimpleEntity authored 1
RNADrug authored 1
_Deleted replacementInstances +
FailedReaction revised +
Reaction revised +
Polymerisation revised +
DefinedSet revised +
Pathway revised +
Depolymerisation revised +
Event revised +
Drug revised +
GenomeEncodedEntity revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
Complex revised +
ReactionlikeEvent revised +
RNADrug revised +
ChemicalDrug revised +
SimpleEntity revised +
Polymer revised +
Cell revised +
EntitySet revised +
BlackBoxEvent revised +
CellLineagePath revised +
ProteinDrug revised +
CellDevelopmentStep revised +
InteractionEvent revised +
PhysicalEntity revised +
CandidateSet revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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