Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
_Deleted replacementInstances +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
CellDevelopmentStep reviewed +
EntitySet reviewed +
Cell reviewed +
Reaction reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
Polymerisation reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
OtherEntity reviewed +
Drug reviewed +
CellLineagePath reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
GenomeEncodedEntity reviewed +
CandidateSet reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
PhysicalEntity reviewed +
RNADrug reviewed +
ProteinDrug reviewed +
Event reviewed +
ReferenceDNASequence modified +
CatalystActivityReference modified +
PhysicalEntityCellType modified +
CellDevelopmentStep modified +
FrontPage modified +
_DeletedInstance modified +
Complex modified +
Polymerisation modified +
FragmentModification modified +
Book modified +
ReferenceMolecule modified +
Taxon modified +
GO_CellularComponent modified +
Affiliation modified +
CrosslinkedResidue modified +
FunctionalStatus modified +
ChemicalDrug modified +
FragmentReplacedModification modified +
ControlledVocabulary modified +
Figure modified +
PsiMod modified +
TranslationalModification modified +
Requirement modified +
GroupModifiedResidue modified +
_UpdateTracker modified +
ProteinDrug modified +
ReplacedResidue modified +
InteractionEvent modified +
_Release modified +
ReferenceGeneProduct modified +
EntitySet modified +
Cell modified +
DatabaseIdentifier modified +
ReferenceSequence modified +
RetractionStatus modified +
FailedReaction modified +
GO_MolecularFunction modified +
StableIdentifier modified +
MarkerReference modified +
CellLineagePath modified +
ReferenceRNASequence modified +
ReactionlikeEvent modified +
_Deleted modified +
TranscriptionalModification modified +
InstanceEdit modified +
ModifiedNucleotide modified +
RegulationReference modified +
Polymer modified +
ReferenceEntity modified +
CandidateSet modified +
ReactionType modified +
DatabaseObject modified +
PathwayDiagram modified +
ControlReference modified +
FragmentDeletionModification modified +
FragmentInsertionModification modified +
AbstractModifiedResidue modified +
NegativeGeneExpressionRegulation modified +
PhysicalEntity modified +
Summation modified +
Compartment modified +
DrugActionType modified +
ReferenceTherapeutic modified +
GeneticallyModifiedResidue modified +
ReferenceIsoform modified +
URL modified +
NegativePrecedingEvent modified +
Pathway modified +
Reaction modified +
Anatomy modified +
EvidenceType modified +
IntraChainCrosslinkedResidue modified +
Drug modified +
Person modified +
GenomeEncodedEntity modified +
GO_BiologicalProcess modified +
ExternalOntology modified +
DeletedControlledVocabulary modified +
Event modified +
CellType modified +
ModifiedResidue modified +
SimpleEntity modified +
PositiveGeneExpressionRegulation modified +
BlackBoxEvent modified +
EntityWithAccessionedSequence modified +
ReviewStatus modified +
OtherEntity modified +
NonsenseMutation modified +
Publication modified +
SequenceOntology modified +
NegativeRegulation modified +
LiteratureReference modified +
Depolymerisation modified +
DefinedSet modified +
InterChainCrosslinkedResidue modified +
EntityFunctionalStatus modified +
ReferenceDatabase modified +
Disease modified +
CatalystActivity modified +
FunctionalStatusType modified +
PositiveRegulation modified +
Regulation modified +
ReferenceGroup modified +
NegativePrecedingEventReason modified +
StableIdentifierReleaseStatus modified +
StableIdentifierHistory modified +
RNADrug modified +
Species modified +
Figure created 1
PsiMod created 1
TranslationalModification created 1
Requirement created 1
GroupModifiedResidue created 1
_UpdateTracker created 1
ProteinDrug created 1
GO_CellularComponent created 1
Affiliation created 1
CrosslinkedResidue created 1
FunctionalStatus created 1
ChemicalDrug created 1
FragmentReplacedModification created 1
ControlledVocabulary created 1
Polymerisation created 1
FragmentModification created 1
Complex created 1
Book created 1
ReferenceMolecule created 1
Taxon created 1
ReferenceDNASequence created 1
CatalystActivityReference created 1
PhysicalEntityCellType created 1
CellDevelopmentStep created 1
FrontPage created 1
_DeletedInstance created 1
PathwayDiagram created 1
DatabaseObject created 1
ControlReference created 1
AbstractModifiedResidue created 1
FragmentDeletionModification created 1
NegativeGeneExpressionRegulation created 1
FragmentInsertionModification created 1
PhysicalEntity created 1
Summation created 1
DrugActionType created 1
Compartment created 1
TranscriptionalModification created 1
InstanceEdit created 1
RegulationReference created 1
ModifiedNucleotide created 1
Polymer created 1
ReferenceEntity created 1
ReactionType created 1
CandidateSet created 1
StableIdentifier created 1
ReferenceRNASequence created 1
CellLineagePath created 1
MarkerReference created 1
ReactionlikeEvent created 1
_Deleted created 1
ReplacedResidue created 1
InteractionEvent created 1
_Release created 1
ReferenceGeneProduct created 1
EntitySet created 1
DatabaseIdentifier created 1
ReferenceSequence created 1
Cell created 1
RetractionStatus created 1
FailedReaction created 1
GO_MolecularFunction created 1
ExternalOntology created 1
DeletedControlledVocabulary created 1
Event created 1
CellType created 1
Person created 1
GenomeEncodedEntity created 1
GO_BiologicalProcess created 1
Reaction created 1
Pathway created 1
Anatomy created 1
EvidenceType created 1
Drug created 1
IntraChainCrosslinkedResidue created 1
ReferenceTherapeutic created 1
GeneticallyModifiedResidue created 1
ReferenceIsoform created 1
URL created 1
NegativePrecedingEvent created 1
ReferenceGroup created 1
NegativePrecedingEventReason created 1
StableIdentifierReleaseStatus created 1
StableIdentifierHistory created 1
RNADrug created 1
Species created 1
LiteratureReference created 1
Depolymerisation created 1
InterChainCrosslinkedResidue created 1
DefinedSet created 1
ReferenceDatabase created 1
EntityFunctionalStatus created 1
Disease created 1
CatalystActivity created 1
FunctionalStatusType created 1
Regulation created 1
PositiveRegulation created 1
EntityWithAccessionedSequence created 1
OtherEntity created 1
ReviewStatus created 1
NonsenseMutation created 1
Publication created 1
SequenceOntology created 1
NegativeRegulation created 1
ModifiedResidue created 1
SimpleEntity created 1
PositiveGeneExpressionRegulation created 1
BlackBoxEvent created 1
Polymerisation structureModified +
Pathway structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Event structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent authored +
SimpleEntity authored 1
InteractionEvent authored +
FailedReaction authored +
CellDevelopmentStep authored +
EntitySet authored 1
Cell authored 1
Pathway authored +
Reaction authored +
Polymerisation authored +
Complex authored 1
EntityWithAccessionedSequence authored 1
ReactionlikeEvent authored +
Drug authored 1
OtherEntity authored 1
CellLineagePath authored +
DefinedSet authored 1
Depolymerisation authored +
GenomeEncodedEntity authored 1
CandidateSet authored 1
Polymer authored 1
ChemicalDrug authored 1
RNADrug authored 1
PhysicalEntity authored 1
ProteinDrug authored 1
Event authored +
BlackBoxEvent revised +
SimpleEntity revised +
InteractionEvent revised +
FailedReaction revised +
Cell revised +
EntitySet revised +
CellDevelopmentStep revised +
EntityWithAccessionedSequence revised +
Polymerisation revised +
Complex revised +
Reaction revised +
Pathway revised +
ReactionlikeEvent revised +
CellLineagePath revised +
Drug revised +
OtherEntity revised +
DefinedSet revised +
Depolymerisation revised +
CandidateSet revised +
GenomeEncodedEntity revised +
ChemicalDrug revised +
Polymer revised +
PhysicalEntity revised +
RNADrug revised +
ProteinDrug revised +
Event revised +
Depolymerisation edited +
DefinedSet edited +
Polymer edited +
ChemicalDrug edited +
GenomeEncodedEntity edited +
CandidateSet edited +
RNADrug edited +
PhysicalEntity edited +
Event edited +
ProteinDrug edited +
InteractionEvent edited +
SimpleEntity edited +
BlackBoxEvent edited +
CellDevelopmentStep edited +
EntitySet edited +
Cell edited +
FailedReaction edited +
Reaction edited +
Pathway edited +
Polymerisation edited +
Complex edited +
EntityWithAccessionedSequence edited +
OtherEntity edited +
Drug edited +
CellLineagePath edited +
ReactionlikeEvent edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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