Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
PositiveGeneExpressionRegulation modified +
Polymer modified +
Book modified +
ExternalOntology modified +
DeletedControlledVocabulary modified +
ReactionlikeEvent modified +
Complex modified +
IntraChainCrosslinkedResidue modified +
CellType modified +
ReferenceIsoform modified +
ReferenceEntity modified +
_DeletedInstance modified +
Figure modified +
Drug modified +
NegativeGeneExpressionRegulation modified +
FragmentInsertionModification modified +
PositiveRegulation modified +
GenomeEncodedEntity modified +
TranscriptionalModification modified +
ReferenceDNASequence modified +
Taxon modified +
PhysicalEntityCellType modified +
PhysicalEntity modified +
_UpdateTracker modified +
DrugActionType modified +
StableIdentifier modified +
SequenceOntology modified +
ReferenceGroup modified +
Requirement modified +
CatalystActivityReference modified +
FragmentDeletionModification modified +
Compartment modified +
Reaction modified +
NegativePrecedingEventReason modified +
MarkerReference modified +
TranslationalModification modified +
EntityFunctionalStatus modified +
ReferenceGeneProduct modified +
Affiliation modified +
InteractionEvent modified +
ControlReference modified +
ReferenceDatabase modified +
InstanceEdit modified +
GeneticallyModifiedResidue modified +
CrosslinkedResidue modified +
RetractionStatus modified +
GO_MolecularFunction modified +
CandidateSet modified +
CellLineagePath modified +
InterChainCrosslinkedResidue modified +
FailedReaction modified +
StableIdentifierHistory modified +
ModifiedNucleotide modified +
ReviewStatus modified +
FragmentReplacedModification modified +
Person modified +
Regulation modified +
DatabaseObject modified +
PsiMod modified +
BlackBoxEvent modified +
DefinedSet modified +
Depolymerisation modified +
ReplacedResidue modified +
_Release modified +
EvidenceType modified +
Publication modified +
LiteratureReference modified +
GroupModifiedResidue modified +
SimpleEntity modified +
Event modified +
Polymerisation modified +
AbstractModifiedResidue modified +
ChemicalDrug modified +
FragmentModification modified +
FunctionalStatus modified +
ReferenceRNASequence modified +
Disease modified +
ControlledVocabulary modified +
StableIdentifierReleaseStatus modified +
URL modified +
CatalystActivity modified +
GO_CellularComponent modified +
NegativePrecedingEvent modified +
FrontPage modified +
GO_BiologicalProcess modified +
ModifiedResidue modified +
RegulationReference modified +
NegativeRegulation modified +
RNADrug modified +
ProteinDrug modified +
ReactionType modified +
DatabaseIdentifier modified +
EntitySet modified +
ReferenceMolecule modified +
ReferenceTherapeutic modified +
OtherEntity modified +
Anatomy modified +
NonsenseMutation modified +
ReferenceSequence modified +
CellDevelopmentStep modified +
Pathway modified +
_Deleted modified +
EntityWithAccessionedSequence modified +
Summation modified +
Cell modified +
PathwayDiagram modified +
FunctionalStatusType modified +
Species modified +
_Deleted replacementInstances +
ReactionlikeEvent structureModified +
Pathway structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
Event structureModified +
Polymerisation structureModified +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Event authored +
Polymerisation authored +
SimpleEntity authored 1
InteractionEvent authored +
OtherEntity authored 1
GenomeEncodedEntity authored 1
Drug authored 1
ChemicalDrug authored 1
Depolymerisation authored +
Polymer authored 1
ProteinDrug authored 1
DefinedSet authored 1
EntitySet authored 1
Complex authored 1
ReactionlikeEvent authored +
FailedReaction authored +
Cell authored 1
BlackBoxEvent authored +
RNADrug authored 1
Reaction authored +
PhysicalEntity authored 1
CellDevelopmentStep authored +
CellLineagePath authored +
EntityWithAccessionedSequence authored 1
Pathway authored +
CandidateSet authored 1
OtherEntity reviewed +
InteractionEvent reviewed +
SimpleEntity reviewed +
Event reviewed +
Polymerisation reviewed +
Drug reviewed +
ChemicalDrug reviewed +
GenomeEncodedEntity reviewed +
ProteinDrug reviewed +
DefinedSet reviewed +
Polymer reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
Complex reviewed +
EntitySet reviewed +
Cell reviewed +
FailedReaction reviewed +
Reaction reviewed +
BlackBoxEvent reviewed +
RNADrug reviewed +
CellDevelopmentStep reviewed +
PhysicalEntity reviewed +
CandidateSet reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
Cell revised +
FailedReaction revised +
BlackBoxEvent revised +
RNADrug revised +
Reaction revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
EntityWithAccessionedSequence revised +
CellLineagePath revised +
CandidateSet revised +
Pathway revised +
Event revised +
SimpleEntity revised +
Polymerisation revised +
OtherEntity revised +
InteractionEvent revised +
GenomeEncodedEntity revised +
ChemicalDrug revised +
Drug revised +
Depolymerisation revised +
DefinedSet revised +
ProteinDrug revised +
Polymer revised +
Complex revised +
EntitySet revised +
ReactionlikeEvent revised +
FunctionalStatus created 1
ChemicalDrug created 1
FragmentModification created 1
Event created 1
Polymerisation created 1
SimpleEntity created 1
AbstractModifiedResidue created 1
LiteratureReference created 1
GroupModifiedResidue created 1
Publication created 1
EvidenceType created 1
Depolymerisation created 1
ReplacedResidue created 1
_Release created 1
DefinedSet created 1
NegativeRegulation created 1
RegulationReference created 1
RNADrug created 1
GO_BiologicalProcess created 1
ModifiedResidue created 1
FrontPage created 1
NegativePrecedingEvent created 1
GO_CellularComponent created 1
StableIdentifierReleaseStatus created 1
URL created 1
CatalystActivity created 1
ControlledVocabulary created 1
Disease created 1
ReferenceRNASequence created 1
ReferenceSequence created 1
NonsenseMutation created 1
ReferenceTherapeutic created 1
OtherEntity created 1
Anatomy created 1
EntitySet created 1
ReferenceMolecule created 1
ReactionType created 1
DatabaseIdentifier created 1
ProteinDrug created 1
Species created 1
FunctionalStatusType created 1
PathwayDiagram created 1
Cell created 1
EntityWithAccessionedSequence created 1
Summation created 1
Pathway created 1
_Deleted created 1
CellDevelopmentStep created 1
GenomeEncodedEntity created 1
PositiveRegulation created 1
TranscriptionalModification created 1
ReferenceDNASequence created 1
FragmentInsertionModification created 1
Figure created 1
NegativeGeneExpressionRegulation created 1
Drug created 1
_DeletedInstance created 1
CellType created 1
ReferenceIsoform created 1
ReferenceEntity created 1
Complex created 1
IntraChainCrosslinkedResidue created 1
DeletedControlledVocabulary created 1
ReactionlikeEvent created 1
Book created 1
ExternalOntology created 1
Polymer created 1
PositiveGeneExpressionRegulation created 1
MarkerReference created 1
Reaction created 1
NegativePrecedingEventReason created 1
ReferenceGroup created 1
FragmentDeletionModification created 1
Requirement created 1
CatalystActivityReference created 1
Compartment created 1
StableIdentifier created 1
SequenceOntology created 1
_UpdateTracker created 1
DrugActionType created 1
PhysicalEntityCellType created 1
PhysicalEntity created 1
Taxon created 1
GeneticallyModifiedResidue created 1
RetractionStatus created 1
CrosslinkedResidue created 1
InstanceEdit created 1
ReferenceDatabase created 1
ControlReference created 1
InteractionEvent created 1
Affiliation created 1
ReferenceGeneProduct created 1
EntityFunctionalStatus created 1
TranslationalModification created 1
Person created 1
FragmentReplacedModification created 1
DatabaseObject created 1
PsiMod created 1
Regulation created 1
BlackBoxEvent created 1
ModifiedNucleotide created 1
ReviewStatus created 1
StableIdentifierHistory created 1
FailedReaction created 1
CellLineagePath created 1
InterChainCrosslinkedResidue created 1
CandidateSet created 1
GO_MolecularFunction created 1
CellLineagePath edited +
EntityWithAccessionedSequence edited +
CandidateSet edited +
Pathway edited +
PhysicalEntity edited +
CellDevelopmentStep edited +
RNADrug edited +
BlackBoxEvent edited +
Reaction edited +
Cell edited +
FailedReaction edited +
Complex edited +
EntitySet edited +
ReactionlikeEvent edited +
Depolymerisation edited +
ProteinDrug edited +
DefinedSet edited +
Polymer edited +
GenomeEncodedEntity edited +
ChemicalDrug edited +
Drug edited +
Polymerisation edited +
Event edited +
SimpleEntity edited +
OtherEntity edited +
InteractionEvent edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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