Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ChemicalDrug edited +
EntityWithAccessionedSequence edited +
FailedReaction edited +
ProteinDrug edited +
Pathway edited +
RNADrug edited +
CellLineagePath edited +
BlackBoxEvent edited +
CellDevelopmentStep edited +
EntitySet edited +
OtherEntity edited +
DefinedSet edited +
Reaction edited +
Event edited +
Drug edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
CandidateSet edited +
Polymer edited +
InteractionEvent edited +
Polymerisation edited +
PhysicalEntity edited +
SimpleEntity edited +
Complex edited +
Cell edited +
ReactionlikeEvent edited +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Pathway structureModified +
_Deleted replacementInstances +
BlackBoxEvent modified +
FragmentModification modified +
CellLineagePath modified +
DatabaseObject modified +
Event modified +
ReferenceMolecule modified +
GroupModifiedResidue modified +
ModifiedResidue modified +
ControlReference modified +
CellType modified +
NegativeGeneExpressionRegulation modified +
FunctionalStatusType modified +
Figure modified +
InstanceEdit modified +
Requirement modified +
Species modified +
Anatomy modified +
SimpleEntity modified +
_Deleted modified +
TranscriptionalModification modified +
CandidateSet modified +
Drug modified +
EntityFunctionalStatus modified +
PsiMod modified +
SequenceOntology modified +
DatabaseIdentifier modified +
CatalystActivityReference modified +
EntitySet modified +
Summation modified +
ExternalOntology modified +
GeneticallyModifiedResidue modified +
FrontPage modified +
MarkerReference modified +
_Release modified +
Reaction modified +
Person modified +
StableIdentifier modified +
NonsenseMutation modified +
ChemicalDrug modified +
RNADrug modified +
FragmentInsertionModification modified +
InteractionEvent modified +
DrugActionType modified +
URL modified +
PhysicalEntity modified +
RegulationReference modified +
ReactionlikeEvent modified +
Complex modified +
ReactionType modified +
PhysicalEntityCellType modified +
GenomeEncodedEntity modified +
PositiveRegulation modified +
Polymer modified +
Regulation modified +
OtherEntity modified +
ReferenceGeneProduct modified +
ReplacedResidue modified +
CellDevelopmentStep modified +
FunctionalStatus modified +
GO_BiologicalProcess modified +
_UpdateTracker modified +
DeletedControlledVocabulary modified +
Publication modified +
_DeletedInstance modified +
DefinedSet modified +
FragmentDeletionModification modified +
IntraChainCrosslinkedResidue modified +
FailedReaction modified +
Disease modified +
StableIdentifierHistory modified +
ReferenceDatabase modified +
RetractionStatus modified +
CatalystActivity modified +
ReferenceIsoform modified +
EvidenceType modified +
Taxon modified +
PathwayDiagram modified +
ReviewStatus modified +
Book modified +
ReferenceSequence modified +
Depolymerisation modified +
FragmentReplacedModification modified +
AbstractModifiedResidue modified +
GO_CellularComponent modified +
GO_MolecularFunction modified +
Compartment modified +
InterChainCrosslinkedResidue modified +
ControlledVocabulary modified +
NegativeRegulation modified +
ReferenceDNASequence modified +
ReferenceGroup modified +
NegativePrecedingEventReason modified +
EntityWithAccessionedSequence modified +
ReferenceTherapeutic modified +
Pathway modified +
TranslationalModification modified +
ProteinDrug modified +
Affiliation modified +
Polymerisation modified +
StableIdentifierReleaseStatus modified +
CrosslinkedResidue modified +
LiteratureReference modified +
Cell modified +
PositiveGeneExpressionRegulation modified +
ReferenceRNASequence modified +
ModifiedNucleotide modified +
NegativePrecedingEvent modified +
ReferenceEntity modified +
Polymer revised +
Drug revised +
CandidateSet revised +
Depolymerisation revised +
GenomeEncodedEntity revised +
Complex revised +
SimpleEntity revised +
ReactionlikeEvent revised +
Cell revised +
InteractionEvent revised +
Polymerisation revised +
PhysicalEntity revised +
Pathway revised +
ProteinDrug revised +
RNADrug revised +
EntityWithAccessionedSequence revised +
ChemicalDrug revised +
FailedReaction revised +
Reaction revised +
DefinedSet revised +
Event revised +
CellLineagePath revised +
EntitySet revised +
OtherEntity revised +
BlackBoxEvent revised +
CellDevelopmentStep revised +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
GO_MolecularFunction created 1
Compartment created 1
ReferenceDNASequence created 1
NegativeRegulation created 1
InterChainCrosslinkedResidue created 1
ControlledVocabulary created 1
NegativePrecedingEventReason created 1
EntityWithAccessionedSequence created 1
ReferenceGroup created 1
Pathway created 1
TranslationalModification created 1
ProteinDrug created 1
ReferenceTherapeutic created 1
Polymerisation created 1
CrosslinkedResidue created 1
StableIdentifierReleaseStatus created 1
Affiliation created 1
PositiveGeneExpressionRegulation created 1
ModifiedNucleotide created 1
ReferenceRNASequence created 1
LiteratureReference created 1
Cell created 1
NegativePrecedingEvent created 1
ReferenceEntity created 1
GO_BiologicalProcess created 1
FunctionalStatus created 1
_UpdateTracker created 1
OtherEntity created 1
ReplacedResidue created 1
ReferenceGeneProduct created 1
CellDevelopmentStep created 1
DefinedSet created 1
FragmentDeletionModification created 1
DeletedControlledVocabulary created 1
Publication created 1
_DeletedInstance created 1
Disease created 1
StableIdentifierHistory created 1
FailedReaction created 1
IntraChainCrosslinkedResidue created 1
ReferenceIsoform created 1
RetractionStatus created 1
CatalystActivity created 1
ReferenceDatabase created 1
Taxon created 1
EvidenceType created 1
ReviewStatus created 1
Book created 1
PathwayDiagram created 1
AbstractModifiedResidue created 1
ReferenceSequence created 1
Depolymerisation created 1
FragmentReplacedModification created 1
GO_CellularComponent created 1
GeneticallyModifiedResidue created 1
MarkerReference created 1
FrontPage created 1
EntitySet created 1
Summation created 1
ExternalOntology created 1
Reaction created 1
_Release created 1
NonsenseMutation created 1
ChemicalDrug created 1
StableIdentifier created 1
Person created 1
FragmentInsertionModification created 1
RNADrug created 1
RegulationReference created 1
InteractionEvent created 1
DrugActionType created 1
URL created 1
PhysicalEntity created 1
Complex created 1
ReactionType created 1
ReactionlikeEvent created 1
PositiveRegulation created 1
PhysicalEntityCellType created 1
GenomeEncodedEntity created 1
Polymer created 1
Regulation created 1
DatabaseObject created 1
FragmentModification created 1
CellLineagePath created 1
BlackBoxEvent created 1
ReferenceMolecule created 1
Event created 1
ModifiedResidue created 1
ControlReference created 1
GroupModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
CellType created 1
FunctionalStatusType created 1
Species created 1
Requirement created 1
Anatomy created 1
SimpleEntity created 1
_Deleted created 1
Figure created 1
InstanceEdit created 1
Drug created 1
EntityFunctionalStatus created 1
TranscriptionalModification created 1
CandidateSet created 1
CatalystActivityReference created 1
DatabaseIdentifier created 1
PsiMod created 1
SequenceOntology created 1
Drug authored 1
CandidateSet authored 1
GenomeEncodedEntity authored 1
Depolymerisation authored +
Polymer authored 1
Polymerisation authored +
InteractionEvent authored +
PhysicalEntity authored 1
Complex authored 1
SimpleEntity authored 1
ReactionlikeEvent authored +
Cell authored 1
ChemicalDrug authored 1
EntityWithAccessionedSequence authored 1
FailedReaction authored +
Pathway authored +
ProteinDrug authored 1
RNADrug authored 1
CellLineagePath authored +
OtherEntity authored 1
EntitySet authored 1
CellDevelopmentStep authored +
BlackBoxEvent authored +
Reaction authored +
DefinedSet authored 1
Event authored +
RNADrug reviewed +
Pathway reviewed +
ProteinDrug reviewed +
FailedReaction reviewed +
EntityWithAccessionedSequence reviewed +
ChemicalDrug reviewed +
Event reviewed +
Reaction reviewed +
DefinedSet reviewed +
EntitySet reviewed +
OtherEntity reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
CellLineagePath reviewed +
Polymer reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
Depolymerisation reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
Cell reviewed +
Complex reviewed +
SimpleEntity reviewed +
Polymerisation reviewed +
InteractionEvent reviewed +
PhysicalEntity reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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