Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
GenomeEncodedEntity reviewed +
EntityWithAccessionedSequence reviewed +
Cell reviewed +
CellLineagePath reviewed +
Pathway reviewed +
ProteinDrug reviewed +
Reaction reviewed +
Complex reviewed +
Polymerisation reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
InteractionEvent reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
Polymer reviewed +
CandidateSet reviewed +
Depolymerisation reviewed +
RNADrug reviewed +
FailedReaction reviewed +
EntitySet reviewed +
PhysicalEntity reviewed +
CellDevelopmentStep reviewed +
Event reviewed +
SimpleEntity reviewed +
OtherEntity reviewed +
DefinedSet reviewed +
MarkerReference created 1
Compartment created 1
GroupModifiedResidue created 1
Requirement created 1
Polymer created 1
TranslationalModification created 1
Depolymerisation created 1
GO_CellularComponent created 1
FragmentDeletionModification created 1
NegativeRegulation created 1
FrontPage created 1
DatabaseObject created 1
PositiveRegulation created 1
Event created 1
GeneticallyModifiedResidue created 1
GO_BiologicalProcess created 1
_UpdateTracker created 1
ProteinDrug created 1
RegulationReference created 1
EvidenceType created 1
Regulation created 1
PsiMod created 1
BlackBoxEvent created 1
Taxon created 1
InteractionEvent created 1
DeletedControlledVocabulary created 1
ReferenceIsoform created 1
Disease created 1
CrosslinkedResidue created 1
IntraChainCrosslinkedResidue created 1
ReactionlikeEvent created 1
ModifiedNucleotide created 1
NonsenseMutation created 1
CandidateSet created 1
InstanceEdit created 1
ReferenceGroup created 1
FragmentInsertionModification created 1
AbstractModifiedResidue created 1
URL created 1
FailedReaction created 1
EntitySet created 1
PhysicalEntity created 1
CellDevelopmentStep created 1
StableIdentifierReleaseStatus created 1
Publication created 1
DefinedSet created 1
Species created 1
EntityWithAccessionedSequence created 1
Anatomy created 1
SequenceOntology created 1
Polymerisation created 1
CatalystActivityReference created 1
_DeletedInstance created 1
InterChainCrosslinkedResidue created 1
_Release created 1
FunctionalStatus created 1
PhysicalEntityCellType created 1
ModifiedResidue created 1
ReferenceEntity created 1
Person created 1
ReferenceRNASequence created 1
SimpleEntity created 1
DrugActionType created 1
ReferenceTherapeutic created 1
GenomeEncodedEntity created 1
LiteratureReference created 1
ControlReference created 1
NegativePrecedingEventReason created 1
NegativeGeneExpressionRegulation created 1
Reaction created 1
Figure created 1
Complex created 1
FunctionalStatusType created 1
ChemicalDrug created 1
ReferenceDatabase created 1
PathwayDiagram created 1
FragmentModification created 1
ReplacedResidue created 1
ExternalOntology created 1
CellType created 1
CatalystActivity created 1
ControlledVocabulary created 1
TranscriptionalModification created 1
RNADrug created 1
FragmentReplacedModification created 1
Summation created 1
ReferenceDNASequence created 1
GO_MolecularFunction created 1
PositiveGeneExpressionRegulation created 1
OtherEntity created 1
ReferenceMolecule created 1
ReactionType created 1
ReviewStatus created 1
Cell created 1
Affiliation created 1
ReferenceSequence created 1
CellLineagePath created 1
Book created 1
DatabaseIdentifier created 1
ReferenceGeneProduct created 1
Pathway created 1
StableIdentifier created 1
RetractionStatus created 1
_Deleted created 1
Drug created 1
NegativePrecedingEvent created 1
EntityFunctionalStatus created 1
StableIdentifierHistory created 1
ReactionlikeEvent authored +
Polymerisation authored +
Complex authored 1
BlackBoxEvent authored +
ChemicalDrug authored 1
Drug authored 1
InteractionEvent authored +
ProteinDrug authored 1
Pathway authored +
Reaction authored +
Cell authored 1
EntityWithAccessionedSequence authored 1
GenomeEncodedEntity authored 1
CellLineagePath authored +
CellDevelopmentStep authored +
PhysicalEntity authored 1
Event authored +
SimpleEntity authored 1
DefinedSet authored 1
OtherEntity authored 1
RNADrug authored 1
FailedReaction authored +
EntitySet authored 1
Depolymerisation authored +
CandidateSet authored 1
Polymer authored 1
RNADrug revised +
EntitySet revised +
FailedReaction revised +
SimpleEntity revised +
Event revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
DefinedSet revised +
OtherEntity revised +
Polymer revised +
Depolymerisation revised +
CandidateSet revised +
BlackBoxEvent revised +
Polymerisation revised +
Complex revised +
InteractionEvent revised +
Drug revised +
ChemicalDrug revised +
ReactionlikeEvent revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
GenomeEncodedEntity revised +
Cell revised +
Pathway revised +
ProteinDrug revised +
Reaction revised +
CellDevelopmentStep structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
Pathway structureModified +
Depolymerisation structureModified +
Reaction structureModified +
CellLineagePath structureModified +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
Cell edited +
EntityWithAccessionedSequence edited +
GenomeEncodedEntity edited +
CellLineagePath edited +
Reaction edited +
ProteinDrug edited +
Pathway edited +
ChemicalDrug edited +
Drug edited +
InteractionEvent edited +
Complex edited +
Polymerisation edited +
BlackBoxEvent edited +
ReactionlikeEvent edited +
Polymer edited +
Depolymerisation edited +
CandidateSet edited +
FailedReaction edited +
EntitySet edited +
RNADrug edited +
OtherEntity edited +
DefinedSet edited +
CellDevelopmentStep edited +
PhysicalEntity edited +
SimpleEntity edited +
Event edited +
Affiliation modified +
CellLineagePath modified +
ReferenceSequence modified +
Book modified +
Cell modified +
DatabaseIdentifier modified +
Pathway modified +
ReferenceGeneProduct modified +
StableIdentifier modified +
RetractionStatus modified +
NegativePrecedingEvent modified +
Drug modified +
_Deleted modified +
EntityFunctionalStatus modified +
StableIdentifierHistory modified +
CellType modified +
ExternalOntology modified +
ReplacedResidue modified +
CatalystActivity modified +
ControlledVocabulary modified +
ReferenceDNASequence modified +
Summation modified +
RNADrug modified +
FragmentReplacedModification modified +
TranscriptionalModification modified +
GO_MolecularFunction modified +
PositiveGeneExpressionRegulation modified +
ReviewStatus modified +
ReactionType modified +
ReferenceMolecule modified +
OtherEntity modified +
DrugActionType modified +
ReferenceTherapeutic modified +
GenomeEncodedEntity modified +
LiteratureReference modified +
NegativePrecedingEventReason modified +
ControlReference modified +
Figure modified +
NegativeGeneExpressionRegulation modified +
Reaction modified +
FunctionalStatusType modified +
Complex modified +
ChemicalDrug modified +
PathwayDiagram modified +
ReferenceDatabase modified +
FragmentModification modified +
_DeletedInstance modified +
InterChainCrosslinkedResidue modified +
_Release modified +
ModifiedResidue modified +
ReferenceEntity modified +
FunctionalStatus modified +
PhysicalEntityCellType modified +
Person modified +
SimpleEntity modified +
ReferenceRNASequence modified +
Species modified +
EntityWithAccessionedSequence modified +
Anatomy modified +
Polymerisation modified +
SequenceOntology modified +
CatalystActivityReference modified +
NonsenseMutation modified +
ModifiedNucleotide modified +
InstanceEdit modified +
CandidateSet modified +
FragmentInsertionModification modified +
ReferenceGroup modified +
AbstractModifiedResidue modified +
EntitySet modified +
FailedReaction modified +
URL modified +
StableIdentifierReleaseStatus modified +
CellDevelopmentStep modified +
PhysicalEntity modified +
Publication modified +
DefinedSet modified +
GO_BiologicalProcess modified +
_UpdateTracker modified +
RegulationReference modified +
ProteinDrug modified +
Regulation modified +
EvidenceType modified +
BlackBoxEvent modified +
PsiMod modified +
Taxon modified +
InteractionEvent modified +
DeletedControlledVocabulary modified +
Disease modified +
CrosslinkedResidue modified +
ReferenceIsoform modified +
IntraChainCrosslinkedResidue modified +
ReactionlikeEvent modified +
Compartment modified +
MarkerReference modified +
Requirement modified +
Polymer modified +
GroupModifiedResidue modified +
TranslationalModification modified +
Depolymerisation modified +
FragmentDeletionModification modified +
GO_CellularComponent modified +
DatabaseObject modified +
PositiveRegulation modified +
Event modified +
NegativeRegulation modified +
FrontPage modified +
GeneticallyModifiedResidue modified +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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