Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
Cell authored 1
ProteinDrug authored 1
InteractionEvent authored +
EntityWithAccessionedSequence authored 1
CellDevelopmentStep authored +
EntitySet authored 1
ChemicalDrug authored 1
Pathway authored +
BlackBoxEvent authored +
GenomeEncodedEntity authored 1
SimpleEntity authored 1
PhysicalEntity authored 1
CellLineagePath authored +
OtherEntity authored 1
Polymer authored 1
RNADrug authored 1
ReactionlikeEvent authored +
Depolymerisation authored +
DefinedSet authored 1
CandidateSet authored 1
Event authored +
FailedReaction authored +
Drug authored 1
Complex authored 1
Polymerisation authored +
Reaction authored +
ProteinDrug revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
Cell revised +
CellDevelopmentStep revised +
EntitySet revised +
ChemicalDrug revised +
BlackBoxEvent revised +
Pathway revised +
PhysicalEntity revised +
CellLineagePath revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
RNADrug revised +
ReactionlikeEvent revised +
Polymer revised +
OtherEntity revised +
Depolymerisation revised +
Event revised +
FailedReaction revised +
DefinedSet revised +
CandidateSet revised +
Polymerisation revised +
Complex revised +
Reaction revised +
Drug revised +
_Deleted replacementInstances +
FailedReaction edited +
Event edited +
CandidateSet edited +
DefinedSet edited +
Reaction edited +
Complex edited +
Polymerisation edited +
Drug edited +
ReactionlikeEvent edited +
RNADrug edited +
Polymer edited +
OtherEntity edited +
Depolymerisation edited +
BlackBoxEvent edited +
Pathway edited +
CellLineagePath edited +
PhysicalEntity edited +
SimpleEntity edited +
GenomeEncodedEntity edited +
ProteinDrug edited +
InteractionEvent edited +
EntityWithAccessionedSequence edited +
Cell edited +
ChemicalDrug edited +
CellDevelopmentStep edited +
EntitySet edited +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
Pathway structureModified +
FailedReaction structureModified +
Event structureModified +
BlackBoxEvent structureModified +
ChemicalDrug reviewed +
EntitySet reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
EntityWithAccessionedSequence reviewed +
Cell reviewed +
CellLineagePath reviewed +
PhysicalEntity reviewed +
SimpleEntity reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
Pathway reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
RNADrug reviewed +
Polymer reviewed +
OtherEntity reviewed +
Reaction reviewed +
Polymerisation reviewed +
Complex reviewed +
Drug reviewed +
FailedReaction reviewed +
Event reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
NegativePrecedingEvent created 1
StableIdentifierHistory created 1
StableIdentifierReleaseStatus created 1
DatabaseIdentifier created 1
_Deleted created 1
SimpleEntity created 1
DeletedControlledVocabulary created 1
FunctionalStatusType created 1
PhysicalEntity created 1
Cell created 1
GO_MolecularFunction created 1
ProteinDrug created 1
ReactionType created 1
ChemicalDrug created 1
DefinedSet created 1
Event created 1
Compartment created 1
FragmentInsertionModification created 1
InterChainCrosslinkedResidue created 1
ReviewStatus created 1
Taxon created 1
ModifiedNucleotide created 1
AbstractModifiedResidue created 1
PathwayDiagram created 1
CatalystActivity created 1
FragmentReplacedModification created 1
CellType created 1
GroupModifiedResidue created 1
IntraChainCrosslinkedResidue created 1
Pathway created 1
Person created 1
SequenceOntology created 1
ControlReference created 1
BlackBoxEvent created 1
EvidenceType created 1
PhysicalEntityCellType created 1
CellLineagePath created 1
ReferenceEntity created 1
ReferenceSequence created 1
Figure created 1
PositiveGeneExpressionRegulation created 1
ReferenceRNASequence created 1
EntitySet created 1
FunctionalStatus created 1
EntityFunctionalStatus created 1
Requirement created 1
_DeletedInstance created 1
Complex created 1
Reaction created 1
Polymer created 1
URL created 1
NonsenseMutation created 1
ControlledVocabulary created 1
Species created 1
StableIdentifier created 1
FragmentModification created 1
GenomeEncodedEntity created 1
TranscriptionalModification created 1
NegativePrecedingEventReason created 1
ReplacedResidue created 1
ModifiedResidue created 1
NegativeRegulation created 1
EntityWithAccessionedSequence created 1
GeneticallyModifiedResidue created 1
CellDevelopmentStep created 1
TranslationalModification created 1
GO_CellularComponent created 1
PositiveRegulation created 1
ReferenceMolecule created 1
FailedReaction created 1
_UpdateTracker created 1
ReferenceGeneProduct created 1
NegativeGeneExpressionRegulation created 1
Regulation created 1
Book created 1
RegulationReference created 1
Polymerisation created 1
MarkerReference created 1
OtherEntity created 1
FragmentDeletionModification created 1
RNADrug created 1
Anatomy created 1
InstanceEdit created 1
Disease created 1
Affiliation created 1
RetractionStatus created 1
CatalystActivityReference created 1
CrosslinkedResidue created 1
_Release created 1
Publication created 1
InteractionEvent created 1
Summation created 1
ReferenceDNASequence created 1
DrugActionType created 1
PsiMod created 1
ReferenceGroup created 1
CandidateSet created 1
ExternalOntology created 1
GO_BiologicalProcess created 1
FrontPage created 1
DatabaseObject created 1
LiteratureReference created 1
Drug created 1
ReferenceIsoform created 1
ReferenceDatabase created 1
ReferenceTherapeutic created 1
ReactionlikeEvent created 1
Depolymerisation created 1
_Release modified +
CatalystActivityReference modified +
CrosslinkedResidue modified +
ReferenceGroup modified +
PsiMod modified +
DrugActionType modified +
ReferenceDNASequence modified +
InteractionEvent modified +
Summation modified +
Publication modified +
Drug modified +
DatabaseObject modified +
LiteratureReference modified +
GO_BiologicalProcess modified +
FrontPage modified +
ExternalOntology modified +
CandidateSet modified +
Depolymerisation modified +
ReactionlikeEvent modified +
ReferenceTherapeutic modified +
ReferenceDatabase modified +
ReferenceIsoform modified +
NegativePrecedingEventReason modified +
GenomeEncodedEntity modified +
FragmentModification modified +
TranscriptionalModification modified +
StableIdentifier modified +
CellDevelopmentStep modified +
TranslationalModification modified +
GeneticallyModifiedResidue modified +
ModifiedResidue modified +
EntityWithAccessionedSequence modified +
NegativeRegulation modified +
ReplacedResidue modified +
Polymerisation modified +
RegulationReference modified +
Book modified +
MarkerReference modified +
Regulation modified +
ReferenceMolecule modified +
FailedReaction modified +
ReferenceGeneProduct modified +
_UpdateTracker modified +
NegativeGeneExpressionRegulation modified +
GO_CellularComponent modified +
PositiveRegulation modified +
RetractionStatus modified +
Disease modified +
InstanceEdit modified +
Affiliation modified +
RNADrug modified +
Anatomy modified +
OtherEntity modified +
FragmentDeletionModification modified +
EvidenceType modified +
PhysicalEntityCellType modified +
CellLineagePath modified +
ControlReference modified +
BlackBoxEvent modified +
Pathway modified +
Person modified +
SequenceOntology modified +
EntitySet modified +
FunctionalStatus modified +
PositiveGeneExpressionRegulation modified +
ReferenceRNASequence modified +
ReferenceEntity modified +
Figure modified +
ReferenceSequence modified +
_DeletedInstance modified +
Complex modified +
Reaction modified +
Requirement modified +
EntityFunctionalStatus modified +
Species modified +
ControlledVocabulary modified +
NonsenseMutation modified +
Polymer modified +
URL modified +
FunctionalStatusType modified +
PhysicalEntity modified +
DatabaseIdentifier modified +
SimpleEntity modified +
_Deleted modified +
DeletedControlledVocabulary modified +
NegativePrecedingEvent modified +
StableIdentifierHistory modified +
StableIdentifierReleaseStatus modified +
ReactionType modified +
ChemicalDrug modified +
GO_MolecularFunction modified +
ProteinDrug modified +
Cell modified +
ReviewStatus modified +
InterChainCrosslinkedResidue modified +
FragmentInsertionModification modified +
Compartment modified +
Event modified +
DefinedSet modified +
IntraChainCrosslinkedResidue modified +
CellType modified +
CatalystActivity modified +
PathwayDiagram modified +
FragmentReplacedModification modified +
GroupModifiedResidue modified +
Taxon modified +
ModifiedNucleotide modified +
AbstractModifiedResidue modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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