Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
Polymer edited +
CellLineagePath edited +
FailedReaction edited +
ReactionlikeEvent edited +
CandidateSet edited +
Pathway edited +
Cell edited +
Event edited +
DefinedSet edited +
BlackBoxEvent edited +
Reaction edited +
EntityWithAccessionedSequence edited +
Polymerisation edited +
PhysicalEntity edited +
Depolymerisation edited +
Complex edited +
SimpleEntity edited +
CellDevelopmentStep edited +
RNADrug edited +
OtherEntity edited +
GenomeEncodedEntity edited +
EntitySet edited +
InteractionEvent edited +
ChemicalDrug edited +
Drug edited +
ProteinDrug edited +
OtherEntity authored 1
GenomeEncodedEntity authored 1
EntitySet authored 1
SimpleEntity authored 1
CellDevelopmentStep authored +
RNADrug authored 1
ChemicalDrug authored 1
Drug authored 1
ProteinDrug authored 1
InteractionEvent authored +
CandidateSet authored 1
ReactionlikeEvent authored +
Pathway authored +
Cell authored 1
CellLineagePath authored +
Polymer authored 1
FailedReaction authored +
Polymerisation authored +
PhysicalEntity authored 1
Depolymerisation authored +
Complex authored 1
Event authored +
DefinedSet authored 1
BlackBoxEvent authored +
Reaction authored +
EntityWithAccessionedSequence authored 1
Cell reviewed +
Pathway reviewed +
CandidateSet reviewed +
ReactionlikeEvent reviewed +
Polymer reviewed +
CellLineagePath reviewed +
FailedReaction reviewed +
PhysicalEntity reviewed +
Polymerisation reviewed +
Complex reviewed +
Depolymerisation reviewed +
DefinedSet reviewed +
Event reviewed +
EntityWithAccessionedSequence reviewed +
Reaction reviewed +
BlackBoxEvent reviewed +
OtherEntity reviewed +
EntitySet reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
RNADrug reviewed +
CellDevelopmentStep reviewed +
Drug reviewed +
ChemicalDrug reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
ProteinDrug revised +
Drug revised +
ChemicalDrug revised +
InteractionEvent revised +
GenomeEncodedEntity revised +
EntitySet revised +
OtherEntity revised +
RNADrug revised +
CellDevelopmentStep revised +
SimpleEntity revised +
Depolymerisation revised +
Complex revised +
PhysicalEntity revised +
Polymerisation revised +
EntityWithAccessionedSequence revised +
Reaction revised +
BlackBoxEvent revised +
DefinedSet revised +
Event revised +
Cell revised +
Pathway revised +
CandidateSet revised +
ReactionlikeEvent revised +
FailedReaction revised +
Polymer revised +
CellLineagePath revised +
FrontPage created 1
FunctionalStatus created 1
PhysicalEntityCellType created 1
InstanceEdit created 1
CatalystActivityReference created 1
SequenceOntology created 1
ControlledVocabulary created 1
_Release created 1
ReferenceRNASequence created 1
ReviewStatus created 1
ReferenceDNASequence created 1
ProteinDrug created 1
PathwayDiagram created 1
CellLineagePath created 1
LiteratureReference created 1
Compartment created 1
Book created 1
TranslationalModification created 1
PositiveRegulation created 1
BlackBoxEvent created 1
Species created 1
PsiMod created 1
_Deleted created 1
Taxon created 1
Complex created 1
GO_MolecularFunction created 1
SimpleEntity created 1
FragmentDeletionModification created 1
GO_BiologicalProcess created 1
CellDevelopmentStep created 1
ExternalOntology created 1
ReactionType created 1
EntityFunctionalStatus created 1
CrosslinkedResidue created 1
GenomeEncodedEntity created 1
ReferenceTherapeutic created 1
Anatomy created 1
ChemicalDrug created 1
FragmentInsertionModification created 1
DatabaseObject created 1
FailedReaction created 1
ReferenceGroup created 1
ReactionlikeEvent created 1
DatabaseIdentifier created 1
Event created 1
Summation created 1
RetractionStatus created 1
NegativePrecedingEventReason created 1
StableIdentifier created 1
NegativeGeneExpressionRegulation created 1
FunctionalStatusType created 1
ReferenceSequence created 1
ReferenceIsoform created 1
DrugActionType created 1
ReferenceEntity created 1
MarkerReference created 1
ReferenceDatabase created 1
Publication created 1
ModifiedResidue created 1
InterChainCrosslinkedResidue created 1
StableIdentifierHistory created 1
Disease created 1
Regulation created 1
Polymer created 1
EvidenceType created 1
_UpdateTracker created 1
ModifiedNucleotide created 1
ReferenceMolecule created 1
CatalystActivity created 1
CandidateSet created 1
Pathway created 1
Cell created 1
ReplacedResidue created 1
FragmentModification created 1
_DeletedInstance created 1
NegativePrecedingEvent created 1
Reaction created 1
GeneticallyModifiedResidue created 1
EntityWithAccessionedSequence created 1
AbstractModifiedResidue created 1
Polymerisation created 1
Person created 1
PhysicalEntity created 1
Requirement created 1
PositiveGeneExpressionRegulation created 1
RNADrug created 1
GroupModifiedResidue created 1
NonsenseMutation created 1
OtherEntity created 1
EntitySet created 1
StableIdentifierReleaseStatus created 1
Affiliation created 1
Figure created 1
InteractionEvent created 1
Drug created 1
CellType created 1
URL created 1
GO_CellularComponent created 1
NegativeRegulation created 1
ControlReference created 1
DeletedControlledVocabulary created 1
FragmentReplacedModification created 1
RegulationReference created 1
DefinedSet created 1
ReferenceGeneProduct created 1
IntraChainCrosslinkedResidue created 1
TranscriptionalModification created 1
Depolymerisation created 1
Event structureModified +
Reaction structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
InterChainCrosslinkedResidue modified +
Disease modified +
StableIdentifierHistory modified +
Publication modified +
ModifiedResidue modified +
ReferenceEntity modified +
ReferenceDatabase modified +
MarkerReference modified +
ReferenceSequence modified +
DrugActionType modified +
ReferenceIsoform modified +
PhysicalEntity modified +
Polymerisation modified +
Person modified +
FragmentModification modified +
AbstractModifiedResidue modified +
EntityWithAccessionedSequence modified +
NegativePrecedingEvent modified +
_DeletedInstance modified +
Reaction modified +
GeneticallyModifiedResidue modified +
CatalystActivity modified +
ReplacedResidue modified +
Pathway modified +
Cell modified +
CandidateSet modified +
ModifiedNucleotide modified +
Regulation modified +
_UpdateTracker modified +
Polymer modified +
EvidenceType modified +
ReferenceMolecule modified +
Drug modified +
CellType modified +
Affiliation modified +
StableIdentifierReleaseStatus modified +
Figure modified +
InteractionEvent modified +
NonsenseMutation modified +
OtherEntity modified +
GroupModifiedResidue modified +
EntitySet modified +
PositiveGeneExpressionRegulation modified +
Requirement modified +
RNADrug modified +
ReferenceGeneProduct modified +
Depolymerisation modified +
TranscriptionalModification modified +
IntraChainCrosslinkedResidue modified +
DefinedSet modified +
RegulationReference modified +
FragmentReplacedModification modified +
ControlReference modified +
NegativeRegulation modified +
GO_CellularComponent modified +
URL modified +
DeletedControlledVocabulary modified +
ReferenceDNASequence modified +
PathwayDiagram modified +
ProteinDrug modified +
_Release modified +
ReviewStatus modified +
ReferenceRNASequence modified +
PhysicalEntityCellType modified +
FunctionalStatus modified +
SequenceOntology modified +
CatalystActivityReference modified +
ControlledVocabulary modified +
InstanceEdit modified +
FrontPage modified +
Taxon modified +
Complex modified +
_Deleted modified +
PositiveRegulation modified +
Compartment modified +
TranslationalModification modified +
Book modified +
PsiMod modified +
Species modified +
BlackBoxEvent modified +
LiteratureReference modified +
CellLineagePath modified +
Anatomy modified +
ChemicalDrug modified +
FragmentInsertionModification modified +
ReferenceTherapeutic modified +
EntityFunctionalStatus modified +
ReactionType modified +
GenomeEncodedEntity modified +
CrosslinkedResidue modified +
SimpleEntity modified +
GO_MolecularFunction modified +
FragmentDeletionModification modified +
GO_BiologicalProcess modified +
ExternalOntology modified +
CellDevelopmentStep modified +
FunctionalStatusType modified +
StableIdentifier modified +
NegativePrecedingEventReason modified +
RetractionStatus modified +
Summation modified +
Event modified +
NegativeGeneExpressionRegulation modified +
DatabaseIdentifier modified +
ReactionlikeEvent modified +
DatabaseObject modified +
ReferenceGroup modified +
FailedReaction modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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