Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellLineagePath edited +
Reaction edited +
Drug edited +
Cell edited +
BlackBoxEvent edited +
SimpleEntity edited +
RNADrug edited +
Polymerisation edited +
FailedReaction edited +
Depolymerisation edited +
DefinedSet edited +
ReactionlikeEvent edited +
Pathway edited +
ChemicalDrug edited +
EntitySet edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
GenomeEncodedEntity edited +
OtherEntity edited +
Event edited +
InteractionEvent edited +
PhysicalEntity edited +
Polymer edited +
CellDevelopmentStep edited +
Complex edited +
ProteinDrug edited +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent created 1
Regulation created 1
Summation created 1
Requirement created 1
AbstractModifiedResidue created 1
_UpdateTracker created 1
Compartment created 1
FragmentDeletionModification created 1
PositiveRegulation created 1
CellLineagePath created 1
EntityFunctionalStatus created 1
ReferenceIsoform created 1
ReferenceTherapeutic created 1
Pathway created 1
ReferenceSequence created 1
_Release created 1
Book created 1
Figure created 1
IntraChainCrosslinkedResidue created 1
ProteinDrug created 1
PathwayDiagram created 1
NegativePrecedingEventReason created 1
MarkerReference created 1
Species created 1
InteractionEvent created 1
ReferenceMolecule created 1
DeletedControlledVocabulary created 1
GO_BiologicalProcess created 1
Person created 1
CrosslinkedResidue created 1
PhysicalEntityCellType created 1
ReferenceGeneProduct created 1
StableIdentifier created 1
Reaction created 1
LiteratureReference created 1
ControlledVocabulary created 1
FailedReaction created 1
Depolymerisation created 1
ReferenceEntity created 1
RetractionStatus created 1
GenomeEncodedEntity created 1
CatalystActivity created 1
Taxon created 1
NegativeRegulation created 1
ChemicalDrug created 1
ReactionType created 1
CandidateSet created 1
EntityWithAccessionedSequence created 1
FunctionalStatusType created 1
PsiMod created 1
GO_CellularComponent created 1
Complex created 1
ModifiedNucleotide created 1
FragmentModification created 1
Anatomy created 1
TranscriptionalModification created 1
PhysicalEntity created 1
ReferenceGroup created 1
ControlReference created 1
_Deleted created 1
SimpleEntity created 1
ExternalOntology created 1
RNADrug created 1
ReferenceRNASequence created 1
_DeletedInstance created 1
DrugActionType created 1
DatabaseObject created 1
DefinedSet created 1
NegativePrecedingEvent created 1
GO_MolecularFunction created 1
StableIdentifierReleaseStatus created 1
Disease created 1
OtherEntity created 1
NegativeGeneExpressionRegulation created 1
GeneticallyModifiedResidue created 1
TranslationalModification created 1
FragmentReplacedModification created 1
FrontPage created 1
Event created 1
FunctionalStatus created 1
SequenceOntology created 1
CellDevelopmentStep created 1
Drug created 1
Cell created 1
Polymerisation created 1
URL created 1
FragmentInsertionModification created 1
GroupModifiedResidue created 1
CellType created 1
ModifiedResidue created 1
ReferenceDatabase created 1
InterChainCrosslinkedResidue created 1
ReviewStatus created 1
ReactionlikeEvent created 1
NonsenseMutation created 1
InstanceEdit created 1
EvidenceType created 1
Publication created 1
DatabaseIdentifier created 1
EntitySet created 1
RegulationReference created 1
ReferenceDNASequence created 1
CatalystActivityReference created 1
ReplacedResidue created 1
PositiveGeneExpressionRegulation created 1
Affiliation created 1
Polymer created 1
StableIdentifierHistory created 1
FailedReaction reviewed +
Depolymerisation reviewed +
DefinedSet reviewed +
Pathway reviewed +
ReactionlikeEvent reviewed +
Reaction reviewed +
CellLineagePath reviewed +
RNADrug reviewed +
Polymerisation reviewed +
SimpleEntity reviewed +
BlackBoxEvent reviewed +
Cell reviewed +
Drug reviewed +
CellDevelopmentStep reviewed +
Polymer reviewed +
PhysicalEntity reviewed +
Event reviewed +
InteractionEvent reviewed +
ProteinDrug reviewed +
Complex reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
EntitySet reviewed +
ChemicalDrug reviewed +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
EvidenceType modified +
InterChainCrosslinkedResidue modified +
InstanceEdit modified +
NonsenseMutation modified +
ReviewStatus modified +
ReactionlikeEvent modified +
FragmentInsertionModification modified +
ReferenceDatabase modified +
ModifiedResidue modified +
CellType modified +
GroupModifiedResidue modified +
Cell modified +
Drug modified +
URL modified +
Polymerisation modified +
Affiliation modified +
StableIdentifierHistory modified +
Polymer modified +
CatalystActivityReference modified +
ReferenceDNASequence modified +
PositiveGeneExpressionRegulation modified +
ReplacedResidue modified +
EntitySet modified +
DatabaseIdentifier modified +
RegulationReference modified +
Publication modified +
DefinedSet modified +
GO_MolecularFunction modified +
NegativePrecedingEvent modified +
DatabaseObject modified +
DrugActionType modified +
SimpleEntity modified +
ExternalOntology modified +
_Deleted modified +
RNADrug modified +
_DeletedInstance modified +
ReferenceRNASequence modified +
FunctionalStatus modified +
Event modified +
CellDevelopmentStep modified +
SequenceOntology modified +
GeneticallyModifiedResidue modified +
TranslationalModification modified +
NegativeGeneExpressionRegulation modified +
FragmentReplacedModification modified +
FrontPage modified +
StableIdentifierReleaseStatus modified +
Disease modified +
OtherEntity modified +
ReferenceEntity modified +
Depolymerisation modified +
FailedReaction modified +
RetractionStatus modified +
ControlledVocabulary modified +
LiteratureReference modified +
StableIdentifier modified +
Reaction modified +
CrosslinkedResidue modified +
Person modified +
GO_BiologicalProcess modified +
ReferenceGeneProduct modified +
PhysicalEntityCellType modified +
PhysicalEntity modified +
ControlReference modified +
ReferenceGroup modified +
FragmentModification modified +
Complex modified +
ModifiedNucleotide modified +
TranscriptionalModification modified +
Anatomy modified +
ChemicalDrug modified +
NegativeRegulation modified +
FunctionalStatusType modified +
PsiMod modified +
GO_CellularComponent modified +
CandidateSet modified +
EntityWithAccessionedSequence modified +
ReactionType modified +
GenomeEncodedEntity modified +
CatalystActivity modified +
Taxon modified +
ReferenceSequence modified +
Book modified +
_Release modified +
ReferenceTherapeutic modified +
ReferenceIsoform modified +
Pathway modified +
CellLineagePath modified +
PositiveRegulation modified +
EntityFunctionalStatus modified +
Regulation modified +
BlackBoxEvent modified +
AbstractModifiedResidue modified +
_UpdateTracker modified +
Compartment modified +
FragmentDeletionModification modified +
Requirement modified +
Summation modified +
ReferenceMolecule modified +
MarkerReference modified +
InteractionEvent modified +
Species modified +
DeletedControlledVocabulary modified +
ProteinDrug modified +
IntraChainCrosslinkedResidue modified +
PathwayDiagram modified +
NegativePrecedingEventReason modified +
Figure modified +
ChemicalDrug revised +
EntitySet revised +
CandidateSet revised +
EntityWithAccessionedSequence revised +
GenomeEncodedEntity revised +
OtherEntity revised +
InteractionEvent revised +
Event revised +
PhysicalEntity revised +
Polymer revised +
CellDevelopmentStep revised +
Complex revised +
ProteinDrug revised +
CellLineagePath revised +
Reaction revised +
Drug revised +
Cell revised +
SimpleEntity revised +
BlackBoxEvent revised +
Polymerisation revised +
RNADrug revised +
FailedReaction revised +
DefinedSet revised +
Depolymerisation revised +
Pathway revised +
ReactionlikeEvent revised +
_Deleted replacementInstances +
Reaction authored +
CellLineagePath authored +
RNADrug authored 1
Polymerisation authored +
Drug authored 1
Cell authored 1
BlackBoxEvent authored +
SimpleEntity authored 1
DefinedSet authored 1
FailedReaction authored +
Depolymerisation authored +
ReactionlikeEvent authored +
Pathway authored +
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
EntitySet authored 1
ChemicalDrug authored 1
OtherEntity authored 1
GenomeEncodedEntity authored 1
Polymer authored 1
CellDevelopmentStep authored +
Event authored +
InteractionEvent authored +
PhysicalEntity authored 1
Complex authored 1
ProteinDrug authored 1
ReactionlikeEvent structureModified +
Pathway structureModified +
Event structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
Reaction structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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