Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymer modified +
Anatomy modified +
GO_MolecularFunction modified +
CatalystActivityReference modified +
AbstractModifiedResidue modified +
EntitySet modified +
Disease modified +
SequenceOntology modified +
MarkerReference modified +
DrugActionType modified +
ControlledVocabulary modified +
ReactionlikeEvent modified +
Regulation modified +
FunctionalStatus modified +
NegativeGeneExpressionRegulation modified +
CrosslinkedResidue modified +
PositiveRegulation modified +
PathwayDiagram modified +
InteractionEvent modified +
ReferenceGeneProduct modified +
Figure modified +
ModifiedNucleotide modified +
ReferenceDNASequence modified +
StableIdentifier modified +
FailedReaction modified +
Book modified +
FragmentInsertionModification modified +
Depolymerisation modified +
FrontPage modified +
GroupModifiedResidue modified +
Taxon modified +
IntraChainCrosslinkedResidue modified +
StableIdentifierHistory modified +
_Deleted modified +
PositiveGeneExpressionRegulation modified +
OtherEntity modified +
Compartment modified +
DefinedSet modified +
Requirement modified +
CatalystActivity modified +
ControlReference modified +
Event modified +
Polymerisation modified +
PsiMod modified +
ChemicalDrug modified +
DatabaseObject modified +
ReactionType modified +
LiteratureReference modified +
ReferenceEntity modified +
RegulationReference modified +
Summation modified +
NegativePrecedingEventReason modified +
Reaction modified +
_Release modified +
Pathway modified +
InstanceEdit modified +
Publication modified +
DeletedControlledVocabulary modified +
RetractionStatus modified +
CandidateSet modified +
ReferenceDatabase modified +
GenomeEncodedEntity modified +
InterChainCrosslinkedResidue modified +
RNADrug modified +
StableIdentifierReleaseStatus modified +
TranscriptionalModification modified +
ReferenceSequence modified +
ReferenceMolecule modified +
URL modified +
DatabaseIdentifier modified +
FragmentDeletionModification modified +
ReferenceRNASequence modified +
CellLineagePath modified +
Affiliation modified +
NegativePrecedingEvent modified +
NonsenseMutation modified +
FragmentModification modified +
GeneticallyModifiedResidue modified +
ReferenceIsoform modified +
CellType modified +
EvidenceType modified +
FunctionalStatusType modified +
Complex modified +
PhysicalEntityCellType modified +
ReviewStatus modified +
GO_BiologicalProcess modified +
CellDevelopmentStep modified +
GO_CellularComponent modified +
_UpdateTracker modified +
EntityWithAccessionedSequence modified +
ReferenceTherapeutic modified +
NegativeRegulation modified +
ExternalOntology modified +
_DeletedInstance modified +
PhysicalEntity modified +
ModifiedResidue modified +
EntityFunctionalStatus modified +
Cell modified +
Species modified +
Drug modified +
ProteinDrug modified +
ReplacedResidue modified +
TranslationalModification modified +
ReferenceGroup modified +
FragmentReplacedModification modified +
BlackBoxEvent modified +
SimpleEntity modified +
Person modified +
Pathway internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
Pathway structureModified +
Event structureModified +
Depolymerisation edited +
Polymer edited +
Reaction edited +
Complex edited +
Pathway edited +
EntitySet edited +
CellDevelopmentStep edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
OtherEntity edited +
RNADrug edited +
DefinedSet edited +
PhysicalEntity edited +
Event edited +
Polymerisation edited +
Cell edited +
ProteinDrug edited +
Drug edited +
ChemicalDrug edited +
InteractionEvent edited +
CellLineagePath edited +
BlackBoxEvent edited +
FailedReaction edited +
SimpleEntity edited +
_Deleted replacementInstances +
CellLineagePath created 1
ReferenceRNASequence created 1
FragmentModification created 1
NonsenseMutation created 1
NegativePrecedingEvent created 1
Affiliation created 1
GeneticallyModifiedResidue created 1
TranscriptionalModification created 1
StableIdentifierReleaseStatus created 1
RNADrug created 1
ReferenceSequence created 1
URL created 1
ReferenceMolecule created 1
FragmentDeletionModification created 1
DatabaseIdentifier created 1
RetractionStatus created 1
CandidateSet created 1
GenomeEncodedEntity created 1
ReferenceDatabase created 1
InterChainCrosslinkedResidue created 1
ReferenceEntity created 1
Reaction created 1
NegativePrecedingEventReason created 1
RegulationReference created 1
Summation created 1
_Release created 1
Publication created 1
DeletedControlledVocabulary created 1
InstanceEdit created 1
Pathway created 1
ReplacedResidue created 1
FragmentReplacedModification created 1
BlackBoxEvent created 1
ReferenceGroup created 1
TranslationalModification created 1
Person created 1
SimpleEntity created 1
_DeletedInstance created 1
PhysicalEntity created 1
ModifiedResidue created 1
EntityFunctionalStatus created 1
Drug created 1
Species created 1
ProteinDrug created 1
Cell created 1
GO_CellularComponent created 1
_UpdateTracker created 1
ReferenceTherapeutic created 1
EntityWithAccessionedSequence created 1
ExternalOntology created 1
NegativeRegulation created 1
ReferenceIsoform created 1
EvidenceType created 1
CellType created 1
FunctionalStatusType created 1
ReviewStatus created 1
Complex created 1
PhysicalEntityCellType created 1
CellDevelopmentStep created 1
GO_BiologicalProcess created 1
InteractionEvent created 1
PathwayDiagram created 1
ReferenceDNASequence created 1
ModifiedNucleotide created 1
ReferenceGeneProduct created 1
Figure created 1
StableIdentifier created 1
FragmentInsertionModification created 1
Book created 1
FailedReaction created 1
Regulation created 1
CrosslinkedResidue created 1
FunctionalStatus created 1
NegativeGeneExpressionRegulation created 1
PositiveRegulation created 1
MarkerReference created 1
SequenceOntology created 1
Disease created 1
ReactionlikeEvent created 1
DrugActionType created 1
ControlledVocabulary created 1
GO_MolecularFunction created 1
Anatomy created 1
Polymer created 1
AbstractModifiedResidue created 1
CatalystActivityReference created 1
EntitySet created 1
ChemicalDrug created 1
DatabaseObject created 1
LiteratureReference created 1
ReactionType created 1
DefinedSet created 1
Event created 1
CatalystActivity created 1
Requirement created 1
ControlReference created 1
PsiMod created 1
Polymerisation created 1
IntraChainCrosslinkedResidue created 1
_Deleted created 1
PositiveGeneExpressionRegulation created 1
StableIdentifierHistory created 1
OtherEntity created 1
Compartment created 1
Depolymerisation created 1
FrontPage created 1
Taxon created 1
GroupModifiedResidue created 1
Complex revised +
Pathway revised +
EntitySet revised +
CellDevelopmentStep revised +
Depolymerisation revised +
Polymer revised +
Reaction revised +
EntityWithAccessionedSequence revised +
ReactionlikeEvent revised +
OtherEntity revised +
GenomeEncodedEntity revised +
CandidateSet revised +
Event revised +
Cell revised +
Polymerisation revised +
ProteinDrug revised +
Drug revised +
RNADrug revised +
DefinedSet revised +
PhysicalEntity revised +
BlackBoxEvent revised +
FailedReaction revised +
SimpleEntity revised +
ChemicalDrug revised +
InteractionEvent revised +
CellLineagePath revised +
Polymer authored 1
Reaction authored +
Depolymerisation authored +
Pathway authored +
EntitySet authored 1
CellDevelopmentStep authored +
Complex authored 1
CandidateSet authored 1
EntityWithAccessionedSequence authored 1
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
OtherEntity authored 1
PhysicalEntity authored 1
RNADrug authored 1
DefinedSet authored 1
Cell authored 1
Polymerisation authored +
Drug authored 1
ProteinDrug authored 1
Event authored +
CellLineagePath authored +
ChemicalDrug authored 1
InteractionEvent authored +
FailedReaction authored +
SimpleEntity authored 1
BlackBoxEvent authored +
Complex reviewed +
CellDevelopmentStep reviewed +
EntitySet reviewed +
Pathway reviewed +
Depolymerisation reviewed +
Reaction reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
OtherEntity reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
Event reviewed +
Drug reviewed +
ProteinDrug reviewed +
Cell reviewed +
Polymerisation reviewed +
DefinedSet reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
BlackBoxEvent reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
InteractionEvent reviewed +
ChemicalDrug reviewed +
CellLineagePath reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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