Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath reviewed +
DefinedSet reviewed +
Polymer reviewed +
ProteinDrug reviewed +
SimpleEntity reviewed +
CellDevelopmentStep reviewed +
Complex reviewed +
OtherEntity reviewed +
ChemicalDrug reviewed +
Event reviewed +
Reaction reviewed +
BlackBoxEvent reviewed +
FailedReaction reviewed +
Depolymerisation reviewed +
Drug reviewed +
RNADrug reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
InteractionEvent reviewed +
EntitySet reviewed +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
Polymerisation reviewed +
_Deleted replacementInstances +
DefinedSet authored 1
CellLineagePath authored +
Polymer authored 1
SimpleEntity authored 1
ProteinDrug authored 1
CellDevelopmentStep authored +
Complex authored 1
OtherEntity authored 1
ChemicalDrug authored 1
Event authored +
Reaction authored +
BlackBoxEvent authored +
FailedReaction authored +
Depolymerisation authored +
Drug authored 1
RNADrug authored 1
CandidateSet authored 1
ReactionlikeEvent authored +
GenomeEncodedEntity authored 1
InteractionEvent authored +
Cell authored 1
EntitySet authored 1
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
Pathway authored +
Polymerisation authored +
ModifiedNucleotide modified +
GO_CellularComponent modified +
PositiveRegulation modified +
FragmentReplacedModification modified +
IntraChainCrosslinkedResidue modified +
DeletedControlledVocabulary modified +
SimpleEntity modified +
DrugActionType modified +
PathwayDiagram modified +
Polymer modified +
Regulation modified +
StableIdentifierHistory modified +
InstanceEdit modified +
ExternalOntology modified +
Event modified +
OtherEntity modified +
SequenceOntology modified +
CandidateSet modified +
PsiMod modified +
ReferenceMolecule modified +
FragmentDeletionModification modified +
NegativePrecedingEvent modified +
CrosslinkedResidue modified +
GO_BiologicalProcess modified +
PositiveGeneExpressionRegulation modified +
ReferenceGeneProduct modified +
DatabaseIdentifier modified +
Cell modified +
EntitySet modified +
ReferenceDNASequence modified +
ModifiedResidue modified +
ControlledVocabulary modified +
RetractionStatus modified +
Publication modified +
ProteinDrug modified +
GeneticallyModifiedResidue modified +
CellLineagePath modified +
Compartment modified +
Anatomy modified +
NonsenseMutation modified +
PhysicalEntityCellType modified +
Reaction modified +
Summation modified +
FunctionalStatusType modified +
Requirement modified +
GenomeEncodedEntity modified +
Disease modified +
CellType modified +
RNADrug modified +
Depolymerisation modified +
_DeletedInstance modified +
Pathway modified +
Book modified +
InteractionEvent modified +
ReviewStatus modified +
ReferenceEntity modified +
EvidenceType modified +
DatabaseObject modified +
URL modified +
CatalystActivityReference modified +
DefinedSet modified +
ReferenceGroup modified +
StableIdentifierReleaseStatus modified +
Taxon modified +
ReferenceRNASequence modified +
_UpdateTracker modified +
MarkerReference modified +
RegulationReference modified +
_Release modified +
ReactionType modified +
FrontPage modified +
ReferenceIsoform modified +
FailedReaction modified +
CatalystActivity modified +
PhysicalEntity modified +
Polymerisation modified +
NegativePrecedingEventReason modified +
ReferenceSequence modified +
EntityWithAccessionedSequence modified +
Person modified +
InterChainCrosslinkedResidue modified +
NegativeRegulation modified +
_Deleted modified +
ReferenceTherapeutic modified +
AbstractModifiedResidue modified +
Complex modified +
GO_MolecularFunction modified +
Species modified +
CellDevelopmentStep modified +
ControlReference modified +
NegativeGeneExpressionRegulation modified +
BlackBoxEvent modified +
TranslationalModification modified +
ChemicalDrug modified +
EntityFunctionalStatus modified +
GroupModifiedResidue modified +
ReactionlikeEvent modified +
TranscriptionalModification modified +
Drug modified +
ReferenceDatabase modified +
ReplacedResidue modified +
FunctionalStatus modified +
Figure modified +
Affiliation modified +
FragmentInsertionModification modified +
StableIdentifier modified +
FragmentModification modified +
LiteratureReference modified +
CellLineagePath structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
Reaction structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
Pathway structureModified +
ModifiedNucleotide created 1
GO_CellularComponent created 1
PositiveRegulation created 1
FragmentReplacedModification created 1
DeletedControlledVocabulary created 1
IntraChainCrosslinkedResidue created 1
SimpleEntity created 1
DrugActionType created 1
PathwayDiagram created 1
Regulation created 1
Polymer created 1
StableIdentifierHistory created 1
InstanceEdit created 1
ExternalOntology created 1
Event created 1
OtherEntity created 1
SequenceOntology created 1
CandidateSet created 1
ReferenceMolecule created 1
PsiMod created 1
FragmentDeletionModification created 1
NegativePrecedingEvent created 1
CrosslinkedResidue created 1
GO_BiologicalProcess created 1
PositiveGeneExpressionRegulation created 1
ReferenceGeneProduct created 1
DatabaseIdentifier created 1
EntitySet created 1
Cell created 1
ModifiedResidue created 1
ReferenceDNASequence created 1
ControlledVocabulary created 1
RetractionStatus created 1
Publication created 1
ProteinDrug created 1
GeneticallyModifiedResidue created 1
CellLineagePath created 1
Compartment created 1
Anatomy created 1
NonsenseMutation created 1
PhysicalEntityCellType created 1
Reaction created 1
Summation created 1
FunctionalStatusType created 1
Requirement created 1
GenomeEncodedEntity created 1
Disease created 1
CellType created 1
RNADrug created 1
Depolymerisation created 1
_DeletedInstance created 1
Pathway created 1
Book created 1
InteractionEvent created 1
ReviewStatus created 1
ReferenceEntity created 1
DatabaseObject created 1
EvidenceType created 1
URL created 1
CatalystActivityReference created 1
DefinedSet created 1
ReferenceGroup created 1
StableIdentifierReleaseStatus created 1
Taxon created 1
ReferenceRNASequence created 1
_UpdateTracker created 1
MarkerReference created 1
RegulationReference created 1
ReactionType created 1
_Release created 1
FrontPage created 1
ReferenceIsoform created 1
FailedReaction created 1
CatalystActivity created 1
PhysicalEntity created 1
Polymerisation created 1
NegativePrecedingEventReason created 1
ReferenceSequence created 1
EntityWithAccessionedSequence created 1
Person created 1
InterChainCrosslinkedResidue created 1
ReferenceTherapeutic created 1
_Deleted created 1
NegativeRegulation created 1
AbstractModifiedResidue created 1
Complex created 1
GO_MolecularFunction created 1
Species created 1
CellDevelopmentStep created 1
ControlReference created 1
NegativeGeneExpressionRegulation created 1
BlackBoxEvent created 1
TranslationalModification created 1
ChemicalDrug created 1
EntityFunctionalStatus created 1
GroupModifiedResidue created 1
ReactionlikeEvent created 1
TranscriptionalModification created 1
Drug created 1
ReferenceDatabase created 1
ReplacedResidue created 1
FunctionalStatus created 1
Figure created 1
Affiliation created 1
FragmentInsertionModification created 1
StableIdentifier created 1
FragmentModification created 1
LiteratureReference created 1
ChemicalDrug revised +
OtherEntity revised +
Reaction revised +
Event revised +
BlackBoxEvent revised +
Polymer revised +
CellLineagePath revised +
DefinedSet revised +
CellDevelopmentStep revised +
ProteinDrug revised +
SimpleEntity revised +
Complex revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
Cell revised +
Pathway revised +
Polymerisation revised +
PhysicalEntity revised +
FailedReaction revised +
Depolymerisation revised +
RNADrug revised +
Drug revised +
GenomeEncodedEntity revised +
CandidateSet revised +
ReactionlikeEvent revised +
EntitySet edited +
Cell edited +
EntityWithAccessionedSequence edited +
PhysicalEntity edited +
Polymerisation edited +
Pathway edited +
InteractionEvent edited +
Drug edited +
RNADrug edited +
CandidateSet edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
Depolymerisation edited +
FailedReaction edited +
BlackBoxEvent edited +
OtherEntity edited +
ChemicalDrug edited +
Reaction edited +
Event edited +
Complex edited +
DefinedSet edited +
CellLineagePath edited +
Polymer edited +
ProteinDrug edited +
SimpleEntity edited +
CellDevelopmentStep edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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