Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymerisation reviewed +
GenomeEncodedEntity reviewed +
OtherEntity reviewed +
EntityWithAccessionedSequence reviewed +
EntitySet reviewed +
PhysicalEntity reviewed +
SimpleEntity reviewed +
CandidateSet reviewed +
CellDevelopmentStep reviewed +
RNADrug reviewed +
Pathway reviewed +
Cell reviewed +
Reaction reviewed +
Drug reviewed +
ProteinDrug reviewed +
Polymer reviewed +
DefinedSet reviewed +
BlackBoxEvent reviewed +
CellLineagePath reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
InteractionEvent reviewed +
Event reviewed +
ChemicalDrug reviewed +
FailedReaction reviewed +
Depolymerisation reviewed +
InteractionEvent edited +
ReactionlikeEvent edited +
Complex edited +
CellLineagePath edited +
Depolymerisation edited +
FailedReaction edited +
ChemicalDrug edited +
Event edited +
Drug edited +
Reaction edited +
Cell edited +
BlackBoxEvent edited +
DefinedSet edited +
ProteinDrug edited +
Polymer edited +
PhysicalEntity edited +
EntitySet edited +
EntityWithAccessionedSequence edited +
OtherEntity edited +
RNADrug edited +
Pathway edited +
CandidateSet edited +
SimpleEntity edited +
CellDevelopmentStep edited +
Polymerisation edited +
GenomeEncodedEntity edited +
Polymerisation revised +
GenomeEncodedEntity revised +
PhysicalEntity revised +
EntitySet revised +
EntityWithAccessionedSequence revised +
OtherEntity revised +
RNADrug revised +
Pathway revised +
CellDevelopmentStep revised +
SimpleEntity revised +
CandidateSet revised +
Drug revised +
Reaction revised +
Cell revised +
BlackBoxEvent revised +
DefinedSet revised +
ProteinDrug revised +
Polymer revised +
ReactionlikeEvent revised +
InteractionEvent revised +
Complex revised +
CellLineagePath revised +
Depolymerisation revised +
FailedReaction revised +
ChemicalDrug revised +
Event revised +
Polymerisation internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
TranscriptionalModification created 1
Person created 1
Taxon created 1
CatalystActivityReference created 1
FrontPage created 1
FragmentDeletionModification created 1
CrosslinkedResidue created 1
SimpleEntity created 1
StableIdentifierHistory created 1
ReferenceRNASequence created 1
ReferenceDatabase created 1
FragmentInsertionModification created 1
GO_CellularComponent created 1
GO_MolecularFunction created 1
FunctionalStatusType created 1
Publication created 1
_Deleted created 1
Polymer created 1
Compartment created 1
ReplacedResidue created 1
ReferenceGroup created 1
FunctionalStatus created 1
InteractionEvent created 1
_Release created 1
IntraChainCrosslinkedResidue created 1
ControlReference created 1
TranslationalModification created 1
ReferenceTherapeutic created 1
GenomeEncodedEntity created 1
Anatomy created 1
NegativePrecedingEventReason created 1
FragmentModification created 1
InterChainCrosslinkedResidue created 1
Polymerisation created 1
DatabaseIdentifier created 1
GO_BiologicalProcess created 1
Book created 1
RNADrug created 1
CellDevelopmentStep created 1
Affiliation created 1
PhysicalEntity created 1
_UpdateTracker created 1
GeneticallyModifiedResidue created 1
OtherEntity created 1
EntitySet created 1
EntityWithAccessionedSequence created 1
Figure created 1
Species created 1
CatalystActivity created 1
Reaction created 1
DeletedControlledVocabulary created 1
Drug created 1
Cell created 1
URL created 1
ReferenceGeneProduct created 1
_DeletedInstance created 1
ReferenceIsoform created 1
PhysicalEntityCellType created 1
GroupModifiedResidue created 1
CellLineagePath created 1
ExternalOntology created 1
FragmentReplacedModification created 1
Complex created 1
EvidenceType created 1
PositiveRegulation created 1
NegativeGeneExpressionRegulation created 1
SequenceOntology created 1
NegativePrecedingEvent created 1
Disease created 1
ControlledVocabulary created 1
ReferenceSequence created 1
BlackBoxEvent created 1
InstanceEdit created 1
PathwayDiagram created 1
Summation created 1
ReferenceEntity created 1
ModifiedResidue created 1
Depolymerisation created 1
Requirement created 1
NegativeRegulation created 1
DatabaseObject created 1
MarkerReference created 1
StableIdentifier created 1
DrugActionType created 1
AbstractModifiedResidue created 1
RegulationReference created 1
ReactionType created 1
Pathway created 1
CellType created 1
CandidateSet created 1
StableIdentifierReleaseStatus created 1
EntityFunctionalStatus created 1
DefinedSet created 1
ModifiedNucleotide created 1
PsiMod created 1
RetractionStatus created 1
ProteinDrug created 1
Regulation created 1
LiteratureReference created 1
PositiveGeneExpressionRegulation created 1
NonsenseMutation created 1
ReferenceMolecule created 1
ReferenceDNASequence created 1
ChemicalDrug created 1
Event created 1
FailedReaction created 1
ReactionlikeEvent created 1
ReviewStatus created 1
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
Event structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
_Deleted replacementInstances +
Depolymerisation authored +
Event authored +
ChemicalDrug authored 1
FailedReaction authored +
ReactionlikeEvent authored +
InteractionEvent authored +
CellLineagePath authored +
Complex authored 1
DefinedSet authored 1
BlackBoxEvent authored +
ProteinDrug authored 1
Polymer authored 1
Reaction authored +
Drug authored 1
Cell authored 1
Pathway authored +
RNADrug authored 1
CandidateSet authored 1
SimpleEntity authored 1
CellDevelopmentStep authored +
PhysicalEntity authored 1
OtherEntity authored 1
EntityWithAccessionedSequence authored 1
EntitySet authored 1
GenomeEncodedEntity authored 1
Polymerisation authored +
ReferenceEntity modified +
ModifiedResidue modified +
Summation modified +
PathwayDiagram modified +
InstanceEdit modified +
ReferenceSequence modified +
BlackBoxEvent modified +
MarkerReference modified +
StableIdentifier modified +
DatabaseObject modified +
Requirement modified +
NegativeRegulation modified +
Depolymerisation modified +
SequenceOntology modified +
NegativeGeneExpressionRegulation modified +
PositiveRegulation modified +
EvidenceType modified +
ControlledVocabulary modified +
Disease modified +
NegativePrecedingEvent modified +
LiteratureReference modified +
PositiveGeneExpressionRegulation modified +
Regulation modified +
RetractionStatus modified +
PsiMod modified +
ModifiedNucleotide modified +
ProteinDrug modified +
DefinedSet modified +
ReviewStatus modified +
ReactionlikeEvent modified +
Event modified +
ChemicalDrug modified +
FailedReaction modified +
NonsenseMutation modified +
ReferenceMolecule modified +
ReferenceDNASequence modified +
AbstractModifiedResidue modified +
RegulationReference modified +
DrugActionType modified +
EntityFunctionalStatus modified +
StableIdentifierReleaseStatus modified +
CellType modified +
CandidateSet modified +
ReactionType modified +
Pathway modified +
ReplacedResidue modified +
Publication modified +
_Deleted modified +
Polymer modified +
Compartment modified +
FragmentInsertionModification modified +
GO_CellularComponent modified +
GO_MolecularFunction modified +
FunctionalStatusType modified +
IntraChainCrosslinkedResidue modified +
ControlReference modified +
TranslationalModification modified +
InteractionEvent modified +
_Release modified +
FunctionalStatus modified +
ReferenceGroup modified +
FrontPage modified +
FragmentDeletionModification modified +
CrosslinkedResidue modified +
Taxon modified +
CatalystActivityReference modified +
Person modified +
TranscriptionalModification modified +
StableIdentifierHistory modified +
ReferenceRNASequence modified +
ReferenceDatabase modified +
SimpleEntity modified +
Cell modified +
URL modified +
Reaction modified +
DeletedControlledVocabulary modified +
Drug modified +
Species modified +
CatalystActivity modified +
Figure modified +
CellLineagePath modified +
FragmentReplacedModification modified +
ExternalOntology modified +
Complex modified +
PhysicalEntityCellType modified +
GroupModifiedResidue modified +
_DeletedInstance modified +
ReferenceGeneProduct modified +
ReferenceIsoform modified +
GO_BiologicalProcess modified +
InterChainCrosslinkedResidue modified +
Polymerisation modified +
DatabaseIdentifier modified +
ReferenceTherapeutic modified +
Anatomy modified +
GenomeEncodedEntity modified +
NegativePrecedingEventReason modified +
FragmentModification modified +
OtherEntity modified +
EntitySet modified +
EntityWithAccessionedSequence modified +
_UpdateTracker modified +
PhysicalEntity modified +
GeneticallyModifiedResidue modified +
CellDevelopmentStep modified +
Affiliation modified +
RNADrug modified +
Book modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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