Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
Reaction internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
ReferenceGroup modified +
StableIdentifierHistory modified +
FragmentInsertionModification modified +
ReferenceGeneProduct modified +
FrontPage modified +
EntitySet modified +
Taxon modified +
StableIdentifierReleaseStatus modified +
RetractionStatus modified +
ReferenceDatabase modified +
Pathway modified +
RNADrug modified +
DefinedSet modified +
EntityWithAccessionedSequence modified +
FragmentReplacedModification modified +
_Deleted modified +
ModifiedNucleotide modified +
OtherEntity modified +
FunctionalStatusType modified +
NonsenseMutation modified +
GenomeEncodedEntity modified +
_DeletedInstance modified +
AbstractModifiedResidue modified +
GO_BiologicalProcess modified +
SimpleEntity modified +
ReferenceMolecule modified +
DatabaseObject modified +
Species modified +
ExternalOntology modified +
CellDevelopmentStep modified +
ControlledVocabulary modified +
CatalystActivityReference modified +
Requirement modified +
_Release modified +
Complex modified +
Disease modified +
Event modified +
DeletedControlledVocabulary modified +
LiteratureReference modified +
PathwayDiagram modified +
PhysicalEntityCellType modified +
Summation modified +
Book modified +
Reaction modified +
ProteinDrug modified +
MarkerReference modified +
ReferenceRNASequence modified +
NegativePrecedingEvent modified +
Depolymerisation modified +
_UpdateTracker modified +
DatabaseIdentifier modified +
IntraChainCrosslinkedResidue modified +
Polymer modified +
ReactionlikeEvent modified +
ReferenceSequence modified +
CrosslinkedResidue modified +
GO_MolecularFunction modified +
SequenceOntology modified +
ReviewStatus modified +
Regulation modified +
GeneticallyModifiedResidue modified +
NegativePrecedingEventReason modified +
PositiveRegulation modified +
BlackBoxEvent modified +
RegulationReference modified +
EvidenceType modified +
ControlReference modified +
GO_CellularComponent modified +
ReplacedResidue modified +
PhysicalEntity modified +
Anatomy modified +
DrugActionType modified +
NegativeRegulation modified +
Affiliation modified +
FunctionalStatus modified +
PsiMod modified +
PositiveGeneExpressionRegulation modified +
GroupModifiedResidue modified +
StableIdentifier modified +
ReferenceEntity modified +
Publication modified +
EntityFunctionalStatus modified +
CandidateSet modified +
Figure modified +
InstanceEdit modified +
FailedReaction modified +
InteractionEvent modified +
ChemicalDrug modified +
URL modified +
InterChainCrosslinkedResidue modified +
ModifiedResidue modified +
Compartment modified +
CellLineagePath modified +
TranscriptionalModification modified +
ReactionType modified +
FragmentDeletionModification modified +
Polymerisation modified +
ReferenceTherapeutic modified +
TranslationalModification modified +
ReferenceDNASequence modified +
ReferenceIsoform modified +
NegativeGeneExpressionRegulation modified +
Drug modified +
Cell modified +
FragmentModification modified +
CellType modified +
Person modified +
CatalystActivity modified +
ReviewStatus created 1
CrosslinkedResidue created 1
ReferenceSequence created 1
GO_MolecularFunction created 1
SequenceOntology created 1
Polymer created 1
ReactionlikeEvent created 1
DatabaseIdentifier created 1
IntraChainCrosslinkedResidue created 1
_UpdateTracker created 1
ControlReference created 1
EvidenceType created 1
RegulationReference created 1
PositiveRegulation created 1
BlackBoxEvent created 1
NegativePrecedingEventReason created 1
GeneticallyModifiedResidue created 1
Regulation created 1
PsiMod created 1
FunctionalStatus created 1
NegativeRegulation created 1
Affiliation created 1
DrugActionType created 1
Anatomy created 1
PhysicalEntity created 1
ReplacedResidue created 1
GO_CellularComponent created 1
Publication created 1
ReferenceEntity created 1
StableIdentifier created 1
GroupModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
InteractionEvent created 1
InstanceEdit created 1
FailedReaction created 1
Figure created 1
CandidateSet created 1
EntityFunctionalStatus created 1
TranscriptionalModification created 1
CellLineagePath created 1
ModifiedResidue created 1
Compartment created 1
InterChainCrosslinkedResidue created 1
URL created 1
ChemicalDrug created 1
Person created 1
CellType created 1
FragmentModification created 1
CatalystActivity created 1
Cell created 1
ReferenceIsoform created 1
Drug created 1
ReferenceDNASequence created 1
NegativeGeneExpressionRegulation created 1
TranslationalModification created 1
ReferenceTherapeutic created 1
FragmentDeletionModification created 1
Polymerisation created 1
ReactionType created 1
Taxon created 1
FrontPage created 1
EntitySet created 1
ReferenceGeneProduct created 1
FragmentInsertionModification created 1
StableIdentifierHistory created 1
ReferenceGroup created 1
_Deleted created 1
FragmentReplacedModification created 1
EntityWithAccessionedSequence created 1
DefinedSet created 1
RetractionStatus created 1
RNADrug created 1
Pathway created 1
ReferenceDatabase created 1
StableIdentifierReleaseStatus created 1
OtherEntity created 1
ModifiedNucleotide created 1
DatabaseObject created 1
ReferenceMolecule created 1
SimpleEntity created 1
GO_BiologicalProcess created 1
AbstractModifiedResidue created 1
_DeletedInstance created 1
GenomeEncodedEntity created 1
NonsenseMutation created 1
FunctionalStatusType created 1
CatalystActivityReference created 1
ControlledVocabulary created 1
CellDevelopmentStep created 1
ExternalOntology created 1
Species created 1
DeletedControlledVocabulary created 1
Event created 1
Disease created 1
Complex created 1
Requirement created 1
_Release created 1
Reaction created 1
Book created 1
Summation created 1
PhysicalEntityCellType created 1
PathwayDiagram created 1
LiteratureReference created 1
Depolymerisation created 1
ReferenceRNASequence created 1
NegativePrecedingEvent created 1
MarkerReference created 1
ProteinDrug created 1
Reaction structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
Pathway structureModified +
Event structureModified +
Polymerisation structureModified +
Complex revised +
CandidateSet revised +
Event revised +
Pathway revised +
RNADrug revised +
InteractionEvent revised +
FailedReaction revised +
DefinedSet revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
Polymer revised +
EntitySet revised +
Polymerisation revised +
GenomeEncodedEntity revised +
ProteinDrug revised +
Depolymerisation revised +
SimpleEntity revised +
Drug revised +
Cell revised +
PhysicalEntity revised +
ChemicalDrug revised +
OtherEntity revised +
CellLineagePath revised +
Reaction revised +
ProteinDrug authored 1
GenomeEncodedEntity authored 1
Polymerisation authored +
Cell authored 1
Drug authored 1
SimpleEntity authored 1
Depolymerisation authored +
ChemicalDrug authored 1
PhysicalEntity authored 1
Reaction authored +
CellLineagePath authored +
OtherEntity authored 1
Pathway authored +
RNADrug authored 1
Event authored +
Complex authored 1
CandidateSet authored 1
EntityWithAccessionedSequence authored 1
DefinedSet authored 1
BlackBoxEvent authored +
InteractionEvent authored +
FailedReaction authored +
CellDevelopmentStep authored +
ReactionlikeEvent authored +
Polymer authored 1
EntitySet authored 1
Pathway reviewed +
RNADrug reviewed +
Event reviewed +
Complex reviewed +
CandidateSet reviewed +
EntityWithAccessionedSequence reviewed +
DefinedSet reviewed +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
FailedReaction reviewed +
CellDevelopmentStep reviewed +
ReactionlikeEvent reviewed +
Polymer reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
Cell reviewed +
Drug reviewed +
SimpleEntity reviewed +
Depolymerisation reviewed +
ChemicalDrug reviewed +
PhysicalEntity reviewed +
Reaction reviewed +
CellLineagePath reviewed +
OtherEntity reviewed +
EntitySet edited +
CellDevelopmentStep edited +
Polymer edited +
ReactionlikeEvent edited +
BlackBoxEvent edited +
EntityWithAccessionedSequence edited +
DefinedSet edited +
FailedReaction edited +
InteractionEvent edited +
Pathway edited +
RNADrug edited +
Event edited +
CandidateSet edited +
Complex edited +
Reaction edited +
CellLineagePath edited +
OtherEntity edited +
ChemicalDrug edited +
PhysicalEntity edited +
Cell edited +
Drug edited +
SimpleEntity edited +
Depolymerisation edited +
ProteinDrug edited +
GenomeEncodedEntity edited +
Polymerisation edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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