Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
EntitySet authored 1
DefinedSet authored 1
Drug authored 1
PhysicalEntity authored 1
CandidateSet authored 1
ProteinDrug authored 1
RNADrug authored 1
InteractionEvent authored +
Polymer authored 1
GenomeEncodedEntity authored 1
FailedReaction authored +
ReactionlikeEvent authored +
Event authored +
ChemicalDrug authored 1
Polymerisation authored +
EntityWithAccessionedSequence authored 1
CellLineagePath authored +
Pathway authored +
BlackBoxEvent authored +
Reaction authored +
SimpleEntity authored 1
Cell authored 1
CellDevelopmentStep authored +
OtherEntity authored 1
Complex authored 1
Depolymerisation authored +
Event modified +
GO_MolecularFunction modified +
InterChainCrosslinkedResidue modified +
InteractionEvent modified +
NonsenseMutation modified +
ReviewStatus modified +
Book modified +
StableIdentifierHistory modified +
Depolymerisation modified +
NegativePrecedingEventReason modified +
_Deleted modified +
Cell modified +
PositiveGeneExpressionRegulation modified +
ReferenceSequence modified +
FragmentInsertionModification modified +
Disease modified +
PsiMod modified +
StableIdentifier modified +
URL modified +
Pathway modified +
NegativeRegulation modified +
CrosslinkedResidue modified +
FragmentReplacedModification modified +
Polymer modified +
ReactionlikeEvent modified +
_Release modified +
ReferenceGeneProduct modified +
NegativePrecedingEvent modified +
ReferenceIsoform modified +
ModifiedNucleotide modified +
StableIdentifierReleaseStatus modified +
ReferenceRNASequence modified +
Anatomy modified +
Summation modified +
PositiveRegulation modified +
CellDevelopmentStep modified +
ModifiedResidue modified +
LiteratureReference modified +
CatalystActivity modified +
CellLineagePath modified +
ChemicalDrug modified +
Figure modified +
CellType modified +
RetractionStatus modified +
Taxon modified +
TranslationalModification modified +
Regulation modified +
ReferenceDNASequence modified +
ReferenceGroup modified +
RegulationReference modified +
FrontPage modified +
DeletedControlledVocabulary modified +
PhysicalEntity modified +
ProteinDrug modified +
ControlledVocabulary modified +
MarkerReference modified +
DrugActionType modified +
ExternalOntology modified +
DefinedSet modified +
EvidenceType modified +
ReferenceDatabase modified +
OtherEntity modified +
FunctionalStatus modified +
Affiliation modified +
ReactionType modified +
NegativeGeneExpressionRegulation modified +
IntraChainCrosslinkedResidue modified +
Publication modified +
Polymerisation modified +
EntityWithAccessionedSequence modified +
GroupModifiedResidue modified +
Reaction modified +
GenomeEncodedEntity modified +
FailedReaction modified +
_DeletedInstance modified +
RNADrug modified +
TranscriptionalModification modified +
DatabaseObject modified +
Species modified +
ReferenceEntity modified +
CatalystActivityReference modified +
InstanceEdit modified +
CandidateSet modified +
PathwayDiagram modified +
ReplacedResidue modified +
GeneticallyModifiedResidue modified +
Person modified +
Drug modified +
EntitySet modified +
ReferenceMolecule modified +
_UpdateTracker modified +
Complex modified +
GO_CellularComponent modified +
Compartment modified +
FragmentDeletionModification modified +
EntityFunctionalStatus modified +
Requirement modified +
PhysicalEntityCellType modified +
FragmentModification modified +
ControlReference modified +
GO_BiologicalProcess modified +
AbstractModifiedResidue modified +
FunctionalStatusType modified +
SimpleEntity modified +
DatabaseIdentifier modified +
ReferenceTherapeutic modified +
BlackBoxEvent modified +
SequenceOntology modified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
Event structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
Pathway structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
_Deleted replacementInstances +
CellDevelopmentStep revised +
Cell revised +
OtherEntity revised +
Complex revised +
Depolymerisation revised +
SimpleEntity revised +
ChemicalDrug revised +
EntityWithAccessionedSequence revised +
Polymerisation revised +
CellLineagePath revised +
Pathway revised +
Reaction revised +
BlackBoxEvent revised +
RNADrug revised +
InteractionEvent revised +
GenomeEncodedEntity revised +
Polymer revised +
FailedReaction revised +
ReactionlikeEvent revised +
Event revised +
PhysicalEntity revised +
CandidateSet revised +
ProteinDrug revised +
EntitySet revised +
DefinedSet revised +
Drug revised +
SimpleEntity edited +
BlackBoxEvent edited +
Reaction edited +
EntityWithAccessionedSequence edited +
Polymerisation edited +
Pathway edited +
CellLineagePath edited +
ChemicalDrug edited +
Complex edited +
OtherEntity edited +
Depolymerisation edited +
Cell edited +
CellDevelopmentStep edited +
ProteinDrug edited +
PhysicalEntity edited +
CandidateSet edited +
Drug edited +
DefinedSet edited +
EntitySet edited +
ReactionlikeEvent edited +
FailedReaction edited +
Event edited +
GenomeEncodedEntity edited +
Polymer edited +
InteractionEvent edited +
RNADrug edited +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
EvidenceType created 1
ReferenceDatabase created 1
OtherEntity created 1
FunctionalStatus created 1
Affiliation created 1
ReactionType created 1
NegativeGeneExpressionRegulation created 1
IntraChainCrosslinkedResidue created 1
Publication created 1
EntityWithAccessionedSequence created 1
Polymerisation created 1
GroupModifiedResidue created 1
Reaction created 1
CellType created 1
RetractionStatus created 1
TranslationalModification created 1
Taxon created 1
Regulation created 1
ReferenceGroup created 1
ReferenceDNASequence created 1
RegulationReference created 1
FrontPage created 1
DeletedControlledVocabulary created 1
PhysicalEntity created 1
ProteinDrug created 1
MarkerReference created 1
ControlledVocabulary created 1
DrugActionType created 1
ExternalOntology created 1
DefinedSet created 1
_UpdateTracker created 1
Complex created 1
GO_CellularComponent created 1
Compartment created 1
FragmentDeletionModification created 1
EntityFunctionalStatus created 1
Requirement created 1
FragmentModification created 1
ControlReference created 1
PhysicalEntityCellType created 1
GO_BiologicalProcess created 1
AbstractModifiedResidue created 1
SimpleEntity created 1
FunctionalStatusType created 1
DatabaseIdentifier created 1
ReferenceTherapeutic created 1
BlackBoxEvent created 1
SequenceOntology created 1
GenomeEncodedEntity created 1
FailedReaction created 1
_DeletedInstance created 1
RNADrug created 1
DatabaseObject created 1
TranscriptionalModification created 1
ReferenceEntity created 1
Species created 1
CatalystActivityReference created 1
InstanceEdit created 1
CandidateSet created 1
ReplacedResidue created 1
GeneticallyModifiedResidue created 1
PathwayDiagram created 1
Person created 1
Drug created 1
EntitySet created 1
ReferenceMolecule created 1
Depolymerisation created 1
NegativePrecedingEventReason created 1
_Deleted created 1
Cell created 1
PositiveGeneExpressionRegulation created 1
ReferenceSequence created 1
Disease created 1
FragmentInsertionModification created 1
StableIdentifier created 1
PsiMod created 1
URL created 1
NegativeRegulation created 1
Pathway created 1
CrosslinkedResidue created 1
FragmentReplacedModification created 1
GO_MolecularFunction created 1
Event created 1
InterChainCrosslinkedResidue created 1
InteractionEvent created 1
NonsenseMutation created 1
ReviewStatus created 1
Book created 1
StableIdentifierHistory created 1
Summation created 1
PositiveRegulation created 1
CellDevelopmentStep created 1
ModifiedResidue created 1
LiteratureReference created 1
CatalystActivity created 1
CellLineagePath created 1
ChemicalDrug created 1
Figure created 1
Polymer created 1
ReactionlikeEvent created 1
_Release created 1
ReferenceGeneProduct created 1
NegativePrecedingEvent created 1
ReferenceIsoform created 1
ModifiedNucleotide created 1
StableIdentifierReleaseStatus created 1
ReferenceRNASequence created 1
Anatomy created 1
Complex reviewed +
Depolymerisation reviewed +
OtherEntity reviewed +
Cell reviewed +
CellDevelopmentStep reviewed +
Reaction reviewed +
BlackBoxEvent reviewed +
CellLineagePath reviewed +
EntityWithAccessionedSequence reviewed +
Polymerisation reviewed +
Pathway reviewed +
ChemicalDrug reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
Event reviewed +
ReactionlikeEvent reviewed +
GenomeEncodedEntity reviewed +
Polymer reviewed +
InteractionEvent reviewed +
RNADrug reviewed +
Drug reviewed +
DefinedSet reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
PhysicalEntity reviewed +
CandidateSet reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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