Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent reviewed +
CandidateSet reviewed +
RNADrug reviewed +
Complex reviewed +
Reaction reviewed +
CellLineagePath reviewed +
PhysicalEntity reviewed +
EntityWithAccessionedSequence reviewed +
Polymer reviewed +
FailedReaction reviewed +
InteractionEvent reviewed +
Cell reviewed +
DefinedSet reviewed +
Drug reviewed +
Polymerisation reviewed +
CellDevelopmentStep reviewed +
OtherEntity reviewed +
Depolymerisation reviewed +
EntitySet reviewed +
Pathway reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
ChemicalDrug reviewed +
ProteinDrug reviewed +
SimpleEntity reviewed +
BlackBoxEvent reviewed +
Event structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
Reaction structureModified +
CellLineagePath structureModified +
GenomeEncodedEntity revised +
Event revised +
SimpleEntity revised +
BlackBoxEvent revised +
ChemicalDrug revised +
ProteinDrug revised +
EntitySet revised +
Depolymerisation revised +
Pathway revised +
Polymer revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
DefinedSet revised +
Drug revised +
Polymerisation revised +
CellDevelopmentStep revised +
OtherEntity revised +
InteractionEvent revised +
FailedReaction revised +
Cell revised +
RNADrug revised +
CandidateSet revised +
Complex revised +
ReactionlikeEvent revised +
CellLineagePath revised +
Reaction revised +
_Deleted replacementInstances +
SimpleEntity edited +
BlackBoxEvent edited +
ChemicalDrug edited +
ProteinDrug edited +
GenomeEncodedEntity edited +
Event edited +
Pathway edited +
EntitySet edited +
Depolymerisation edited +
DefinedSet edited +
CellDevelopmentStep edited +
Polymerisation edited +
Drug edited +
OtherEntity edited +
FailedReaction edited +
InteractionEvent edited +
Cell edited +
Polymer edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
Reaction edited +
CandidateSet edited +
RNADrug edited +
Complex edited +
ReactionlikeEvent edited +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
DeletedControlledVocabulary created 1
FrontPage created 1
ReferenceMolecule created 1
MarkerReference created 1
PhysicalEntity created 1
ReferenceGeneProduct created 1
ReferenceSequence created 1
Compartment created 1
DefinedSet created 1
OtherEntity created 1
StableIdentifierReleaseStatus created 1
Figure created 1
CandidateSet created 1
ModifiedNucleotide created 1
StableIdentifierHistory created 1
PositiveRegulation created 1
GenomeEncodedEntity created 1
IntraChainCrosslinkedResidue created 1
StableIdentifier created 1
Book created 1
ChemicalDrug created 1
PathwayDiagram created 1
ProteinDrug created 1
Regulation created 1
GO_MolecularFunction created 1
ReferenceRNASequence created 1
InterChainCrosslinkedResidue created 1
SequenceOntology created 1
EntityWithAccessionedSequence created 1
Polymerisation created 1
ReferenceGroup created 1
FragmentDeletionModification created 1
InteractionEvent created 1
FailedReaction created 1
Cell created 1
FragmentInsertionModification created 1
ControlReference created 1
Affiliation created 1
InstanceEdit created 1
DrugActionType created 1
Person created 1
CellLineagePath created 1
ReplacedResidue created 1
GO_CellularComponent created 1
FunctionalStatus created 1
Anatomy created 1
ReferenceEntity created 1
URL created 1
EntityFunctionalStatus created 1
PositiveGeneExpressionRegulation created 1
Disease created 1
CrosslinkedResidue created 1
_DeletedInstance created 1
Polymer created 1
DatabaseIdentifier created 1
NegativePrecedingEventReason created 1
Complex created 1
CatalystActivityReference created 1
ReferenceDNASequence created 1
ReactionlikeEvent created 1
Species created 1
ReferenceTherapeutic created 1
Reaction created 1
ReactionType created 1
NegativeGeneExpressionRegulation created 1
Event created 1
SimpleEntity created 1
BlackBoxEvent created 1
_UpdateTracker created 1
FragmentReplacedModification created 1
FunctionalStatusType created 1
Requirement created 1
DatabaseObject created 1
Publication created 1
TranscriptionalModification created 1
CellType created 1
Pathway created 1
FragmentModification created 1
GroupModifiedResidue created 1
Taxon created 1
GO_BiologicalProcess created 1
PsiMod created 1
_Release created 1
RetractionStatus created 1
ReferenceIsoform created 1
CellDevelopmentStep created 1
Drug created 1
PhysicalEntityCellType created 1
ReferenceDatabase created 1
Summation created 1
RNADrug created 1
ExternalOntology created 1
ReviewStatus created 1
CatalystActivity created 1
_Deleted created 1
ModifiedResidue created 1
EvidenceType created 1
NegativeRegulation created 1
NegativePrecedingEvent created 1
EntitySet created 1
TranslationalModification created 1
GeneticallyModifiedResidue created 1
AbstractModifiedResidue created 1
RegulationReference created 1
Depolymerisation created 1
LiteratureReference created 1
NonsenseMutation created 1
ControlledVocabulary created 1
EvidenceType modified +
NegativeRegulation modified +
_Deleted modified +
ModifiedResidue modified +
LiteratureReference modified +
NonsenseMutation modified +
ControlledVocabulary modified +
NegativePrecedingEvent modified +
EntitySet modified +
TranslationalModification modified +
GeneticallyModifiedResidue modified +
AbstractModifiedResidue modified +
RegulationReference modified +
Depolymerisation modified +
CellDevelopmentStep modified +
Drug modified +
ReferenceDatabase modified +
PhysicalEntityCellType modified +
Summation modified +
GO_BiologicalProcess modified +
Taxon modified +
PsiMod modified +
_Release modified +
RetractionStatus modified +
ReferenceIsoform modified +
ReviewStatus modified +
CatalystActivity modified +
RNADrug modified +
ExternalOntology modified +
SimpleEntity modified +
BlackBoxEvent modified +
_UpdateTracker modified +
FragmentReplacedModification modified +
ReactionType modified +
NegativeGeneExpressionRegulation modified +
Event modified +
Publication modified +
TranscriptionalModification modified +
CellType modified +
Pathway modified +
GroupModifiedResidue modified +
FragmentModification modified +
FunctionalStatusType modified +
DatabaseObject modified +
Requirement modified +
NegativePrecedingEventReason modified +
Polymer modified +
DatabaseIdentifier modified +
Species modified +
ReferenceTherapeutic modified +
Reaction modified +
Complex modified +
CatalystActivityReference modified +
ReactionlikeEvent modified +
ReferenceDNASequence modified +
URL modified +
ReferenceEntity modified +
EntityFunctionalStatus modified +
PositiveGeneExpressionRegulation modified +
GO_CellularComponent modified +
FunctionalStatus modified +
Anatomy modified +
_DeletedInstance modified +
Disease modified +
CrosslinkedResidue modified +
ReferenceGroup modified +
Polymerisation modified +
FragmentDeletionModification modified +
FailedReaction modified +
InteractionEvent modified +
Cell modified +
InterChainCrosslinkedResidue modified +
SequenceOntology modified +
EntityWithAccessionedSequence modified +
CellLineagePath modified +
ReplacedResidue modified +
FragmentInsertionModification modified +
ControlReference modified +
Affiliation modified +
InstanceEdit modified +
DrugActionType modified +
Person modified +
Book modified +
ChemicalDrug modified +
PathwayDiagram modified +
ProteinDrug modified +
Regulation modified +
PositiveRegulation modified +
GenomeEncodedEntity modified +
IntraChainCrosslinkedResidue modified +
StableIdentifier modified +
GO_MolecularFunction modified +
ReferenceRNASequence modified +
DefinedSet modified +
Compartment modified +
OtherEntity modified +
StableIdentifierReleaseStatus modified +
DeletedControlledVocabulary modified +
FrontPage modified +
MarkerReference modified +
ReferenceMolecule modified +
PhysicalEntity modified +
ReferenceGeneProduct modified +
ReferenceSequence modified +
ModifiedNucleotide modified +
StableIdentifierHistory modified +
CandidateSet modified +
Figure modified +
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
Polymer authored 1
FailedReaction authored +
InteractionEvent authored +
Cell authored 1
CellDevelopmentStep authored +
DefinedSet authored 1
Polymerisation authored +
Drug authored 1
OtherEntity authored 1
ReactionlikeEvent authored +
RNADrug authored 1
CandidateSet authored 1
Complex authored 1
Reaction authored +
CellLineagePath authored +
Event authored +
GenomeEncodedEntity authored 1
ProteinDrug authored 1
ChemicalDrug authored 1
SimpleEntity authored 1
BlackBoxEvent authored +
Depolymerisation authored +
EntitySet authored 1
Pathway authored +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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