Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted created 1
EntitySet created 1
TranslationalModification created 1
CellDevelopmentStep created 1
MarkerReference created 1
ReferenceEntity created 1
ChemicalDrug created 1
InstanceEdit created 1
PhysicalEntityCellType created 1
Anatomy created 1
ProteinDrug created 1
Regulation created 1
ReferenceGeneProduct created 1
CellType created 1
TranscriptionalModification created 1
GroupModifiedResidue created 1
Depolymerisation created 1
RNADrug created 1
DeletedControlledVocabulary created 1
FunctionalStatus created 1
ReferenceSequence created 1
NegativeRegulation created 1
Pathway created 1
ReferenceRNASequence created 1
CatalystActivityReference created 1
GO_CellularComponent created 1
PositiveGeneExpressionRegulation created 1
Person created 1
ReferenceIsoform created 1
_DeletedInstance created 1
DatabaseIdentifier created 1
Event created 1
ReferenceGroup created 1
NegativePrecedingEventReason created 1
Disease created 1
ReferenceDNASequence created 1
EvidenceType created 1
FragmentReplacedModification created 1
GO_MolecularFunction created 1
EntityFunctionalStatus created 1
Compartment created 1
Taxon created 1
DatabaseObject created 1
ReactionType created 1
BlackBoxEvent created 1
SimpleEntity created 1
PathwayDiagram created 1
PhysicalEntity created 1
ReferenceTherapeutic created 1
PositiveRegulation created 1
StableIdentifierHistory created 1
StableIdentifier created 1
GeneticallyModifiedResidue created 1
Figure created 1
NegativePrecedingEvent created 1
RegulationReference created 1
GO_BiologicalProcess created 1
SequenceOntology created 1
ReferenceMolecule created 1
GenomeEncodedEntity created 1
Reaction created 1
ModifiedResidue created 1
CandidateSet created 1
FailedReaction created 1
StableIdentifierReleaseStatus created 1
Affiliation created 1
Polymerisation created 1
URL created 1
Complex created 1
ControlReference created 1
RetractionStatus created 1
Cell created 1
ReviewStatus created 1
ModifiedNucleotide created 1
Publication created 1
_Release created 1
ControlledVocabulary created 1
Summation created 1
EntityWithAccessionedSequence created 1
Polymer created 1
FrontPage created 1
NonsenseMutation created 1
LiteratureReference created 1
ReactionlikeEvent created 1
ReplacedResidue created 1
PsiMod created 1
IntraChainCrosslinkedResidue created 1
ReferenceDatabase created 1
AbstractModifiedResidue created 1
ExternalOntology created 1
Requirement created 1
DrugActionType created 1
CellLineagePath created 1
FunctionalStatusType created 1
_UpdateTracker created 1
DefinedSet created 1
CrosslinkedResidue created 1
Book created 1
NegativeGeneExpressionRegulation created 1
Species created 1
InteractionEvent created 1
CatalystActivity created 1
Drug created 1
InterChainCrosslinkedResidue created 1
FragmentDeletionModification created 1
OtherEntity created 1
FragmentInsertionModification created 1
FragmentModification created 1
BlackBoxEvent reviewed +
SimpleEntity reviewed +
InteractionEvent reviewed +
Depolymerisation reviewed +
RNADrug reviewed +
Drug reviewed +
PhysicalEntity reviewed +
OtherEntity reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
Reaction reviewed +
CandidateSet reviewed +
FailedReaction reviewed +
Event reviewed +
CellLineagePath reviewed +
Polymerisation reviewed +
EntitySet reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
DefinedSet reviewed +
ChemicalDrug reviewed +
Cell reviewed +
ProteinDrug reviewed +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
ReferenceSequence modified +
FunctionalStatus modified +
DeletedControlledVocabulary modified +
Depolymerisation modified +
RNADrug modified +
GroupModifiedResidue modified +
TranscriptionalModification modified +
CellType modified +
Regulation modified +
ReferenceGeneProduct modified +
PositiveGeneExpressionRegulation modified +
GO_CellularComponent modified +
CatalystActivityReference modified +
ReferenceRNASequence modified +
Pathway modified +
NegativeRegulation modified +
EntitySet modified +
TranslationalModification modified +
_Deleted modified +
Anatomy modified +
ProteinDrug modified +
PhysicalEntityCellType modified +
ReferenceEntity modified +
ChemicalDrug modified +
InstanceEdit modified +
MarkerReference modified +
CellDevelopmentStep modified +
GeneticallyModifiedResidue modified +
StableIdentifier modified +
StableIdentifierHistory modified +
ReferenceTherapeutic modified +
PhysicalEntity modified +
PositiveRegulation modified +
PathwayDiagram modified +
BlackBoxEvent modified +
SimpleEntity modified +
ReactionType modified +
Reaction modified +
GenomeEncodedEntity modified +
ReferenceMolecule modified +
SequenceOntology modified +
GO_BiologicalProcess modified +
NegativePrecedingEvent modified +
RegulationReference modified +
Figure modified +
Disease modified +
NegativePrecedingEventReason modified +
ReferenceGroup modified +
Event modified +
DatabaseIdentifier modified +
Person modified +
ReferenceIsoform modified +
_DeletedInstance modified +
DatabaseObject modified +
Taxon modified +
Compartment modified +
EntityFunctionalStatus modified +
GO_MolecularFunction modified +
FragmentReplacedModification modified +
EvidenceType modified +
ReferenceDNASequence modified +
ControlledVocabulary modified +
_Release modified +
Publication modified +
ModifiedNucleotide modified +
IntraChainCrosslinkedResidue modified +
PsiMod modified +
ReplacedResidue modified +
ReactionlikeEvent modified +
LiteratureReference modified +
NonsenseMutation modified +
Polymer modified +
FrontPage modified +
EntityWithAccessionedSequence modified +
Summation modified +
URL modified +
Polymerisation modified +
Affiliation modified +
FailedReaction modified +
StableIdentifierReleaseStatus modified +
CandidateSet modified +
ModifiedResidue modified +
ReviewStatus modified +
Cell modified +
Complex modified +
RetractionStatus modified +
ControlReference modified +
FragmentDeletionModification modified +
Drug modified +
InterChainCrosslinkedResidue modified +
InteractionEvent modified +
CatalystActivity modified +
Species modified +
FragmentModification modified +
FragmentInsertionModification modified +
OtherEntity modified +
FunctionalStatusType modified +
CellLineagePath modified +
DrugActionType modified +
AbstractModifiedResidue modified +
Requirement modified +
ExternalOntology modified +
ReferenceDatabase modified +
NegativeGeneExpressionRegulation modified +
CrosslinkedResidue modified +
Book modified +
_UpdateTracker modified +
DefinedSet modified +
Polymer revised +
EntityWithAccessionedSequence revised +
Pathway revised +
OtherEntity revised +
ReactionlikeEvent revised +
Reaction revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
SimpleEntity revised +
BlackBoxEvent revised +
PhysicalEntity revised +
Drug revised +
RNADrug revised +
Depolymerisation revised +
ChemicalDrug revised +
DefinedSet revised +
CellDevelopmentStep revised +
Complex revised +
ProteinDrug revised +
Cell revised +
Event revised +
FailedReaction revised +
CandidateSet revised +
EntitySet revised +
Polymerisation revised +
CellLineagePath revised +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Event structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
_Deleted replacementInstances +
Complex authored 1
CellDevelopmentStep authored +
DefinedSet authored 1
ChemicalDrug authored 1
Cell authored 1
ProteinDrug authored 1
CandidateSet authored 1
FailedReaction authored +
Event authored +
CellLineagePath authored +
Polymerisation authored +
EntitySet authored 1
OtherEntity authored 1
Pathway authored +
EntityWithAccessionedSequence authored 1
Polymer authored 1
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
Reaction authored +
BlackBoxEvent authored +
SimpleEntity authored 1
InteractionEvent authored +
RNADrug authored 1
Depolymerisation authored +
PhysicalEntity authored 1
Drug authored 1
Pathway edited +
OtherEntity edited +
Polymer edited +
EntityWithAccessionedSequence edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
Reaction edited +
SimpleEntity edited +
BlackBoxEvent edited +
InteractionEvent edited +
PhysicalEntity edited +
Drug edited +
Depolymerisation edited +
RNADrug edited +
CellDevelopmentStep edited +
Complex edited +
ChemicalDrug edited +
DefinedSet edited +
Cell edited +
ProteinDrug edited +
CandidateSet edited +
Event edited +
FailedReaction edited +
CellLineagePath edited +
EntitySet edited +
Polymerisation edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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