Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
NonsenseMutation modified +
ReferenceMolecule modified +
Anatomy modified +
DeletedControlledVocabulary modified +
TranscriptionalModification modified +
IntraChainCrosslinkedResidue modified +
FragmentInsertionModification modified +
_Deleted modified +
ChemicalDrug modified +
BlackBoxEvent modified +
ReplacedResidue modified +
EntitySet modified +
GeneticallyModifiedResidue modified +
EntityWithAccessionedSequence modified +
CellType modified +
NegativePrecedingEvent modified +
Event modified +
LiteratureReference modified +
CandidateSet modified +
GO_MolecularFunction modified +
ControlReference modified +
GroupModifiedResidue modified +
FragmentDeletionModification modified +
ReferenceTherapeutic modified +
Cell modified +
CellDevelopmentStep modified +
ModifiedNucleotide modified +
Species modified +
ReviewStatus modified +
_UpdateTracker modified +
ModifiedResidue modified +
ReactionlikeEvent modified +
CatalystActivity modified +
_Release modified +
FrontPage modified +
InterChainCrosslinkedResidue modified +
FailedReaction modified +
ControlledVocabulary modified +
PsiMod modified +
GenomeEncodedEntity modified +
ReferenceGeneProduct modified +
ReferenceGroup modified +
ExternalOntology modified +
ReferenceRNASequence modified +
InteractionEvent modified +
Depolymerisation modified +
Requirement modified +
EvidenceType modified +
ReferenceDNASequence modified +
DefinedSet modified +
ReferenceDatabase modified +
Polymer modified +
Disease modified +
FunctionalStatus modified +
ReferenceSequence modified +
RetractionStatus modified +
StableIdentifierReleaseStatus modified +
FunctionalStatusType modified +
GO_BiologicalProcess modified +
FragmentModification modified +
RegulationReference modified +
Pathway modified +
Book modified +
MarkerReference modified +
StableIdentifierHistory modified +
Affiliation modified +
ReactionType modified +
DatabaseIdentifier modified +
NegativeGeneExpressionRegulation modified +
SimpleEntity modified +
NegativePrecedingEventReason modified +
GO_CellularComponent modified +
ProteinDrug modified +
RNADrug modified +
PhysicalEntityCellType modified +
StableIdentifier modified +
DatabaseObject modified +
Reaction modified +
PositiveGeneExpressionRegulation modified +
_DeletedInstance modified +
AbstractModifiedResidue modified +
InstanceEdit modified +
URL modified +
CatalystActivityReference modified +
Taxon modified +
PhysicalEntity modified +
ReferenceEntity modified +
SequenceOntology modified +
NegativeRegulation modified +
EntityFunctionalStatus modified +
Complex modified +
FragmentReplacedModification modified +
PositiveRegulation modified +
OtherEntity modified +
PathwayDiagram modified +
Compartment modified +
Publication modified +
Polymerisation modified +
Summation modified +
CellLineagePath modified +
TranslationalModification modified +
Person modified +
Drug modified +
Regulation modified +
CrosslinkedResidue modified +
Figure modified +
ReferenceIsoform modified +
DrugActionType modified +
OtherEntity reviewed +
Event reviewed +
DefinedSet reviewed +
Polymer reviewed +
CandidateSet reviewed +
Reaction reviewed +
Pathway reviewed +
CellLineagePath reviewed +
Cell reviewed +
Polymerisation reviewed +
CellDevelopmentStep reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
FailedReaction reviewed +
PhysicalEntity reviewed +
SimpleEntity reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
ProteinDrug reviewed +
Depolymerisation reviewed +
EntityWithAccessionedSequence reviewed +
EntitySet reviewed +
Complex reviewed +
RNADrug reviewed +
InteractionEvent edited +
ChemicalDrug edited +
GenomeEncodedEntity edited +
BlackBoxEvent edited +
Complex edited +
RNADrug edited +
Depolymerisation edited +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
EntitySet edited +
FailedReaction edited +
PhysicalEntity edited +
SimpleEntity edited +
CellDevelopmentStep edited +
Drug edited +
ReactionlikeEvent edited +
CandidateSet edited +
Event edited +
OtherEntity edited +
DefinedSet edited +
Polymer edited +
Reaction edited +
Pathway edited +
Cell edited +
CellLineagePath edited +
Polymerisation edited +
FunctionalStatus created 1
Disease created 1
ReferenceSequence created 1
RetractionStatus created 1
StableIdentifierReleaseStatus created 1
ReferenceDatabase created 1
DefinedSet created 1
Polymer created 1
EvidenceType created 1
ReferenceDNASequence created 1
Book created 1
Pathway created 1
FragmentModification created 1
RegulationReference created 1
FunctionalStatusType created 1
GO_BiologicalProcess created 1
MarkerReference created 1
StableIdentifierHistory created 1
Affiliation created 1
InterChainCrosslinkedResidue created 1
_Release created 1
FrontPage created 1
CatalystActivity created 1
ControlledVocabulary created 1
PsiMod created 1
FailedReaction created 1
InteractionEvent created 1
ReferenceRNASequence created 1
ReferenceGeneProduct created 1
ReferenceGroup created 1
ExternalOntology created 1
GenomeEncodedEntity created 1
Requirement created 1
Depolymerisation created 1
ControlReference created 1
GO_MolecularFunction created 1
CandidateSet created 1
LiteratureReference created 1
Event created 1
ReferenceTherapeutic created 1
Cell created 1
FragmentDeletionModification created 1
GroupModifiedResidue created 1
_UpdateTracker created 1
ReviewStatus created 1
ModifiedResidue created 1
Species created 1
ModifiedNucleotide created 1
CellDevelopmentStep created 1
ReactionlikeEvent created 1
TranscriptionalModification created 1
ReferenceMolecule created 1
Anatomy created 1
DeletedControlledVocabulary created 1
NonsenseMutation created 1
IntraChainCrosslinkedResidue created 1
BlackBoxEvent created 1
ChemicalDrug created 1
FragmentInsertionModification created 1
_Deleted created 1
NegativePrecedingEvent created 1
CellType created 1
EntityWithAccessionedSequence created 1
EntitySet created 1
GeneticallyModifiedResidue created 1
ReplacedResidue created 1
PathwayDiagram created 1
PositiveRegulation created 1
OtherEntity created 1
Polymerisation created 1
CellLineagePath created 1
Summation created 1
Publication created 1
Compartment created 1
Figure created 1
CrosslinkedResidue created 1
Regulation created 1
Drug created 1
Person created 1
TranslationalModification created 1
DrugActionType created 1
ReferenceIsoform created 1
Taxon created 1
PhysicalEntity created 1
SequenceOntology created 1
ReferenceEntity created 1
FragmentReplacedModification created 1
Complex created 1
NegativeRegulation created 1
EntityFunctionalStatus created 1
PhysicalEntityCellType created 1
PositiveGeneExpressionRegulation created 1
DatabaseObject created 1
Reaction created 1
StableIdentifier created 1
AbstractModifiedResidue created 1
_DeletedInstance created 1
CatalystActivityReference created 1
URL created 1
InstanceEdit created 1
DatabaseIdentifier created 1
NegativeGeneExpressionRegulation created 1
ReactionType created 1
SimpleEntity created 1
GO_CellularComponent created 1
NegativePrecedingEventReason created 1
RNADrug created 1
ProteinDrug created 1
ChemicalDrug authored 1
GenomeEncodedEntity authored 1
BlackBoxEvent authored +
InteractionEvent authored +
ProteinDrug authored 1
Depolymerisation authored +
EntityWithAccessionedSequence authored 1
EntitySet authored 1
Complex authored 1
RNADrug authored 1
FailedReaction authored +
PhysicalEntity authored 1
SimpleEntity authored 1
CellDevelopmentStep authored +
Drug authored 1
ReactionlikeEvent authored +
OtherEntity authored 1
Event authored +
Polymer authored 1
DefinedSet authored 1
CandidateSet authored 1
Reaction authored +
Polymerisation authored +
Pathway authored +
Cell authored 1
CellLineagePath authored +
_Deleted replacementInstances +
ReactionlikeEvent revised +
CellDevelopmentStep revised +
Drug revised +
Reaction revised +
Pathway revised +
Cell revised +
CellLineagePath revised +
Polymerisation revised +
Event revised +
OtherEntity revised +
DefinedSet revised +
Polymer revised +
CandidateSet revised +
ProteinDrug revised +
Depolymerisation revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
Complex revised +
RNADrug revised +
ChemicalDrug revised +
GenomeEncodedEntity revised +
BlackBoxEvent revised +
InteractionEvent revised +
SimpleEntity revised +
FailedReaction revised +
PhysicalEntity revised +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
FailedReaction structureModified +
Pathway structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
Reaction structureModified +
Event internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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