Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
GenomeEncodedEntity revised +
Cell revised +
InteractionEvent revised +
EntitySet revised +
CellLineagePath revised +
CellDevelopmentStep revised +
Reaction revised +
BlackBoxEvent revised +
Drug revised +
Depolymerisation revised +
ReactionlikeEvent revised +
PhysicalEntity revised +
Pathway revised +
ChemicalDrug revised +
DefinedSet revised +
Complex revised +
Polymer revised +
Polymerisation revised +
FailedReaction revised +
CandidateSet revised +
OtherEntity revised +
ProteinDrug revised +
Event revised +
EntityWithAccessionedSequence revised +
SimpleEntity revised +
RNADrug revised +
PsiMod created 1
DeletedControlledVocabulary created 1
OtherEntity created 1
_UpdateTracker created 1
PhysicalEntityCellType created 1
Compartment created 1
GroupModifiedResidue created 1
FragmentReplacedModification created 1
CatalystActivity created 1
ControlledVocabulary created 1
_Release created 1
Taxon created 1
Summation created 1
ReferenceMolecule created 1
LiteratureReference created 1
CellDevelopmentStep created 1
InteractionEvent created 1
FragmentModification created 1
PositiveGeneExpressionRegulation created 1
Anatomy created 1
Figure created 1
Polymer created 1
TranslationalModification created 1
EvidenceType created 1
PathwayDiagram created 1
_DeletedInstance created 1
ReferenceTherapeutic created 1
EntityFunctionalStatus created 1
FragmentDeletionModification created 1
Publication created 1
Regulation created 1
CatalystActivityReference created 1
DatabaseObject created 1
PositiveRegulation created 1
FailedReaction created 1
InstanceEdit created 1
Polymerisation created 1
Requirement created 1
StableIdentifierHistory created 1
Species created 1
Book created 1
Event created 1
RegulationReference created 1
ReferenceIsoform created 1
AbstractModifiedResidue created 1
StableIdentifier created 1
FragmentInsertionModification created 1
GO_CellularComponent created 1
ExternalOntology created 1
NegativePrecedingEvent created 1
NegativeGeneExpressionRegulation created 1
DrugActionType created 1
ModifiedNucleotide created 1
ChemicalDrug created 1
IntraChainCrosslinkedResidue created 1
Pathway created 1
NegativePrecedingEventReason created 1
ReactionlikeEvent created 1
Person created 1
Drug created 1
CandidateSet created 1
FrontPage created 1
ReviewStatus created 1
ReferenceGeneProduct created 1
DatabaseIdentifier created 1
StableIdentifierReleaseStatus created 1
ReferenceEntity created 1
EntityWithAccessionedSequence created 1
SimpleEntity created 1
ReactionType created 1
ReferenceRNASequence created 1
RetractionStatus created 1
GO_MolecularFunction created 1
Reaction created 1
CellLineagePath created 1
EntitySet created 1
URL created 1
CellType created 1
GenomeEncodedEntity created 1
CrosslinkedResidue created 1
Cell created 1
DefinedSet created 1
Complex created 1
PhysicalEntity created 1
NegativeRegulation created 1
ReferenceSequence created 1
FunctionalStatusType created 1
ControlReference created 1
ProteinDrug created 1
ReplacedResidue created 1
InterChainCrosslinkedResidue created 1
Affiliation created 1
ReferenceDNASequence created 1
FunctionalStatus created 1
RNADrug created 1
ReferenceDatabase created 1
ModifiedResidue created 1
_Deleted created 1
GeneticallyModifiedResidue created 1
Disease created 1
TranscriptionalModification created 1
NonsenseMutation created 1
MarkerReference created 1
SequenceOntology created 1
ReferenceGroup created 1
GO_BiologicalProcess created 1
Depolymerisation created 1
BlackBoxEvent created 1
RNADrug reviewed +
Event reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
ReactionlikeEvent reviewed +
PhysicalEntity reviewed +
BlackBoxEvent reviewed +
Drug reviewed +
Depolymerisation reviewed +
Polymer reviewed +
Pathway reviewed +
ChemicalDrug reviewed +
Complex reviewed +
DefinedSet reviewed +
InteractionEvent reviewed +
EntitySet reviewed +
GenomeEncodedEntity reviewed +
Cell reviewed +
Reaction reviewed +
CellDevelopmentStep reviewed +
CellLineagePath reviewed +
GenomeEncodedEntity edited +
Cell edited +
EntitySet edited +
InteractionEvent edited +
CellLineagePath edited +
CellDevelopmentStep edited +
Reaction edited +
BlackBoxEvent edited +
Drug edited +
Depolymerisation edited +
PhysicalEntity edited +
ReactionlikeEvent edited +
ChemicalDrug edited +
Pathway edited +
DefinedSet edited +
Complex edited +
Polymer edited +
Polymerisation edited +
FailedReaction edited +
CandidateSet edited +
OtherEntity edited +
ProteinDrug edited +
Event edited +
SimpleEntity edited +
EntityWithAccessionedSequence edited +
RNADrug edited +
CandidateSet authored 1
Polymerisation authored +
FailedReaction authored +
ProteinDrug authored 1
OtherEntity authored 1
RNADrug authored 1
Event authored +
EntityWithAccessionedSequence authored 1
SimpleEntity authored 1
InteractionEvent authored +
EntitySet authored 1
GenomeEncodedEntity authored 1
Cell authored 1
Reaction authored +
CellLineagePath authored +
CellDevelopmentStep authored +
ReactionlikeEvent authored +
PhysicalEntity authored 1
BlackBoxEvent authored +
Depolymerisation authored +
Drug authored 1
Polymer authored 1
ChemicalDrug authored 1
Pathway authored +
Complex authored 1
DefinedSet authored 1
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Reaction structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
Pathway structureModified +
Event structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
_Deleted modified +
RNADrug modified +
ReferenceDatabase modified +
ModifiedResidue modified +
Affiliation modified +
FunctionalStatus modified +
ReferenceDNASequence modified +
ProteinDrug modified +
ReplacedResidue modified +
InterChainCrosslinkedResidue modified +
Depolymerisation modified +
BlackBoxEvent modified +
GO_BiologicalProcess modified +
SequenceOntology modified +
ReferenceGroup modified +
GeneticallyModifiedResidue modified +
TranscriptionalModification modified +
Disease modified +
NonsenseMutation modified +
MarkerReference modified +
RetractionStatus modified +
GO_MolecularFunction modified +
ReferenceGeneProduct modified +
StableIdentifierReleaseStatus modified +
DatabaseIdentifier modified +
ReferenceEntity modified +
EntityWithAccessionedSequence modified +
SimpleEntity modified +
ReactionType modified +
ReferenceRNASequence modified +
CandidateSet modified +
FrontPage modified +
ReviewStatus modified +
NegativeRegulation modified +
PhysicalEntity modified +
ReferenceSequence modified +
FunctionalStatusType modified +
ControlReference modified +
DefinedSet modified +
Complex modified +
URL modified +
EntitySet modified +
CellType modified +
CrosslinkedResidue modified +
GenomeEncodedEntity modified +
Cell modified +
Reaction modified +
CellLineagePath modified +
RegulationReference modified +
ReferenceIsoform modified +
StableIdentifierHistory modified +
Requirement modified +
Species modified +
Book modified +
Event modified +
PositiveRegulation modified +
InstanceEdit modified +
FailedReaction modified +
Polymerisation modified +
CatalystActivityReference modified +
Regulation modified +
DatabaseObject modified +
NegativePrecedingEventReason modified +
ReactionlikeEvent modified +
Drug modified +
Person modified +
NegativeGeneExpressionRegulation modified +
DrugActionType modified +
ModifiedNucleotide modified +
ChemicalDrug modified +
IntraChainCrosslinkedResidue modified +
Pathway modified +
FragmentInsertionModification modified +
GO_CellularComponent modified +
NegativePrecedingEvent modified +
ExternalOntology modified +
AbstractModifiedResidue modified +
StableIdentifier modified +
CatalystActivity modified +
ControlledVocabulary modified +
_Release modified +
Taxon modified +
Summation modified +
FragmentReplacedModification modified +
_UpdateTracker modified +
PhysicalEntityCellType modified +
Compartment modified +
GroupModifiedResidue modified +
OtherEntity modified +
DeletedControlledVocabulary modified +
PsiMod modified +
ReferenceTherapeutic modified +
EntityFunctionalStatus modified +
Publication modified +
FragmentDeletionModification modified +
PathwayDiagram modified +
Polymer modified +
TranslationalModification modified +
EvidenceType modified +
_DeletedInstance modified +
InteractionEvent modified +
FragmentModification modified +
Anatomy modified +
PositiveGeneExpressionRegulation modified +
Figure modified +
ReferenceMolecule modified +
LiteratureReference modified +
CellDevelopmentStep modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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