Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CrosslinkedResidue modified +
MarkerReference modified +
DrugActionType modified +
ReferenceMolecule modified +
PositiveRegulation modified +
ReferenceSequence modified +
CatalystActivity modified +
InteractionEvent modified +
TranscriptionalModification modified +
PositiveGeneExpressionRegulation modified +
ModifiedNucleotide modified +
ReactionType modified +
ReferenceDNASequence modified +
Requirement modified +
PhysicalEntityCellType modified +
Regulation modified +
Cell modified +
NegativePrecedingEvent modified +
IntraChainCrosslinkedResidue modified +
ControlReference modified +
InstanceEdit modified +
NegativeGeneExpressionRegulation modified +
DatabaseIdentifier modified +
FragmentReplacedModification modified +
GO_BiologicalProcess modified +
StableIdentifier modified +
Polymer modified +
GroupModifiedResidue modified +
FragmentInsertionModification modified +
Figure modified +
PathwayDiagram modified +
_DeletedInstance modified +
EvidenceType modified +
ReferenceTherapeutic modified +
Publication modified +
LiteratureReference modified +
FunctionalStatusType modified +
Depolymerisation modified +
GeneticallyModifiedResidue modified +
Polymerisation modified +
CellLineagePath modified +
Compartment modified +
ControlledVocabulary modified +
RegulationReference modified +
FragmentDeletionModification modified +
BlackBoxEvent modified +
Disease modified +
InterChainCrosslinkedResidue modified +
Drug modified +
SimpleEntity modified +
CatalystActivityReference modified +
DefinedSet modified +
Event modified +
ReferenceIsoform modified +
ChemicalDrug modified +
ReferenceRNASequence modified +
FunctionalStatus modified +
ReferenceGeneProduct modified +
URL modified +
ReferenceDatabase modified +
Person modified +
Taxon modified +
GO_CellularComponent modified +
_Deleted modified +
Species modified +
ExternalOntology modified +
Book modified +
Summation modified +
ModifiedResidue modified +
DeletedControlledVocabulary modified +
EntityFunctionalStatus modified +
GO_MolecularFunction modified +
EntitySet modified +
ReactionlikeEvent modified +
FrontPage modified +
NegativeRegulation modified +
ReferenceGroup modified +
RNADrug modified +
TranslationalModification modified +
FragmentModification modified +
FailedReaction modified +
_Release modified +
PsiMod modified +
StableIdentifierHistory modified +
CellDevelopmentStep modified +
NegativePrecedingEventReason modified +
Complex modified +
ProteinDrug modified +
StableIdentifierReleaseStatus modified +
_UpdateTracker modified +
CandidateSet modified +
Affiliation modified +
ReplacedResidue modified +
AbstractModifiedResidue modified +
PhysicalEntity modified +
SequenceOntology modified +
Pathway modified +
DatabaseObject modified +
RetractionStatus modified +
NonsenseMutation modified +
Reaction modified +
ReviewStatus modified +
ReferenceEntity modified +
OtherEntity modified +
EntityWithAccessionedSequence modified +
Anatomy modified +
GenomeEncodedEntity modified +
CellType modified +
RNADrug authored 1
ChemicalDrug authored 1
Reaction authored +
GenomeEncodedEntity authored 1
EntityWithAccessionedSequence authored 1
OtherEntity authored 1
PhysicalEntity authored 1
EntitySet authored 1
Drug authored 1
Cell authored 1
SimpleEntity authored 1
BlackBoxEvent authored +
ReactionlikeEvent authored +
Event authored +
DefinedSet authored 1
Polymer authored 1
Pathway authored +
CellLineagePath authored +
Polymerisation authored +
ProteinDrug authored 1
Depolymerisation authored +
CandidateSet authored 1
FailedReaction authored +
Complex authored 1
CellDevelopmentStep authored +
InteractionEvent authored +
Polymerisation structureModified +
CellLineagePath structureModified +
Reaction structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
_Deleted replacementInstances +
ChemicalDrug edited +
RNADrug edited +
Reaction edited +
GenomeEncodedEntity edited +
EntityWithAccessionedSequence edited +
OtherEntity edited +
Cell edited +
Drug edited +
SimpleEntity edited +
PhysicalEntity edited +
EntitySet edited +
BlackBoxEvent edited +
DefinedSet edited +
Polymer edited +
Event edited +
ReactionlikeEvent edited +
Pathway edited +
CellLineagePath edited +
Polymerisation edited +
ProteinDrug edited +
Depolymerisation edited +
CandidateSet edited +
FailedReaction edited +
Complex edited +
InteractionEvent edited +
CellDevelopmentStep edited +
OtherEntity revised +
EntityWithAccessionedSequence revised +
GenomeEncodedEntity revised +
Reaction revised +
ChemicalDrug revised +
RNADrug revised +
Pathway revised +
DefinedSet revised +
Polymer revised +
ReactionlikeEvent revised +
Event revised +
BlackBoxEvent revised +
Cell revised +
SimpleEntity revised +
Drug revised +
EntitySet revised +
PhysicalEntity revised +
CandidateSet revised +
Depolymerisation revised +
ProteinDrug revised +
Polymerisation revised +
CellLineagePath revised +
InteractionEvent revised +
CellDevelopmentStep revised +
Complex revised +
FailedReaction revised +
OtherEntity created 1
EntityWithAccessionedSequence created 1
Anatomy created 1
GenomeEncodedEntity created 1
CellType created 1
RetractionStatus created 1
NonsenseMutation created 1
Reaction created 1
ReviewStatus created 1
ReferenceEntity created 1
SequenceOntology created 1
Pathway created 1
DatabaseObject created 1
Affiliation created 1
ReplacedResidue created 1
AbstractModifiedResidue created 1
PhysicalEntity created 1
_UpdateTracker created 1
CandidateSet created 1
ProteinDrug created 1
StableIdentifierReleaseStatus created 1
_Release created 1
PsiMod created 1
StableIdentifierHistory created 1
CellDevelopmentStep created 1
NegativePrecedingEventReason created 1
Complex created 1
FragmentModification created 1
FailedReaction created 1
TranslationalModification created 1
RNADrug created 1
ReferenceGroup created 1
FrontPage created 1
NegativeRegulation created 1
ReactionlikeEvent created 1
DeletedControlledVocabulary created 1
EntityFunctionalStatus created 1
EntitySet created 1
GO_MolecularFunction created 1
Summation created 1
ModifiedResidue created 1
Book created 1
GO_CellularComponent created 1
Taxon created 1
_Deleted created 1
Species created 1
ExternalOntology created 1
Person created 1
ReferenceRNASequence created 1
FunctionalStatus created 1
URL created 1
ReferenceGeneProduct created 1
ReferenceDatabase created 1
ReferenceIsoform created 1
ChemicalDrug created 1
CatalystActivityReference created 1
DefinedSet created 1
Event created 1
BlackBoxEvent created 1
Disease created 1
SimpleEntity created 1
InterChainCrosslinkedResidue created 1
Drug created 1
ControlledVocabulary created 1
RegulationReference created 1
FragmentDeletionModification created 1
GeneticallyModifiedResidue created 1
Depolymerisation created 1
Polymerisation created 1
CellLineagePath created 1
Compartment created 1
LiteratureReference created 1
FunctionalStatusType created 1
_DeletedInstance created 1
EvidenceType created 1
Publication created 1
ReferenceTherapeutic created 1
Figure created 1
PathwayDiagram created 1
GO_BiologicalProcess created 1
DatabaseIdentifier created 1
FragmentReplacedModification created 1
StableIdentifier created 1
GroupModifiedResidue created 1
Polymer created 1
FragmentInsertionModification created 1
Cell created 1
ControlReference created 1
IntraChainCrosslinkedResidue created 1
NegativePrecedingEvent created 1
NegativeGeneExpressionRegulation created 1
InstanceEdit created 1
Regulation created 1
ReferenceDNASequence created 1
PhysicalEntityCellType created 1
Requirement created 1
ReferenceSequence created 1
CatalystActivity created 1
InteractionEvent created 1
TranscriptionalModification created 1
PositiveGeneExpressionRegulation created 1
ModifiedNucleotide created 1
ReactionType created 1
CrosslinkedResidue created 1
MarkerReference created 1
DrugActionType created 1
PositiveRegulation created 1
ReferenceMolecule created 1
Reaction internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
EntitySet reviewed +
PhysicalEntity reviewed +
Cell reviewed +
Drug reviewed +
SimpleEntity reviewed +
BlackBoxEvent reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
Polymer reviewed +
DefinedSet reviewed +
Pathway reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
Reaction reviewed +
GenomeEncodedEntity reviewed +
OtherEntity reviewed +
EntityWithAccessionedSequence reviewed +
FailedReaction reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
InteractionEvent reviewed +
Polymerisation reviewed +
CellLineagePath reviewed +
ProteinDrug reviewed +
Depolymerisation reviewed +
CandidateSet reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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