Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
_Deleted replacementInstances +
RNADrug revised +
ReactionlikeEvent revised +
Complex revised +
GenomeEncodedEntity revised +
FailedReaction revised +
CandidateSet revised +
Polymer revised +
Pathway revised +
CellDevelopmentStep revised +
EntitySet revised +
EntityWithAccessionedSequence revised +
ProteinDrug revised +
Drug revised +
SimpleEntity revised +
ChemicalDrug revised +
InteractionEvent revised +
OtherEntity revised +
PhysicalEntity revised +
Cell revised +
DefinedSet revised +
CellLineagePath revised +
Event revised +
Polymerisation revised +
Depolymerisation revised +
BlackBoxEvent revised +
Reaction revised +
RetractionStatus created 1
Reaction created 1
Species created 1
Publication created 1
ModifiedNucleotide created 1
Book created 1
_UpdateTracker created 1
Summation created 1
MarkerReference created 1
NegativeRegulation created 1
ControlledVocabulary created 1
TranslationalModification created 1
ControlReference created 1
SequenceOntology created 1
AbstractModifiedResidue created 1
ReferenceTherapeutic created 1
ExternalOntology created 1
Drug created 1
ProteinDrug created 1
InterChainCrosslinkedResidue created 1
Affiliation created 1
DatabaseObject created 1
RegulationReference created 1
ReferenceGeneProduct created 1
FunctionalStatus created 1
Taxon created 1
GenomeEncodedEntity created 1
DeletedControlledVocabulary created 1
FragmentModification created 1
RNADrug created 1
StableIdentifierHistory created 1
TranscriptionalModification created 1
ReferenceIsoform created 1
CellLineagePath created 1
ReferenceMolecule created 1
ReplacedResidue created 1
Cell created 1
PhysicalEntity created 1
ReferenceDNASequence created 1
PhysicalEntityCellType created 1
PsiMod created 1
Pathway created 1
FragmentReplacedModification created 1
ModifiedResidue created 1
ReferenceRNASequence created 1
StableIdentifier created 1
_Release created 1
BlackBoxEvent created 1
NegativeGeneExpressionRegulation created 1
ReferenceDatabase created 1
CatalystActivity created 1
Event created 1
FrontPage created 1
GeneticallyModifiedResidue created 1
InstanceEdit created 1
Anatomy created 1
EntityFunctionalStatus created 1
Requirement created 1
Disease created 1
CatalystActivityReference created 1
_DeletedInstance created 1
OtherEntity created 1
InteractionEvent created 1
ChemicalDrug created 1
SimpleEntity created 1
_Deleted created 1
GroupModifiedResidue created 1
EntitySet created 1
Person created 1
FragmentInsertionModification created 1
Figure created 1
PositiveRegulation created 1
FailedReaction created 1
ReactionType created 1
DrugActionType created 1
ReactionlikeEvent created 1
Depolymerisation created 1
ReferenceGroup created 1
CellType created 1
StableIdentifierReleaseStatus created 1
Polymerisation created 1
FragmentDeletionModification created 1
NegativePrecedingEventReason created 1
DefinedSet created 1
IntraChainCrosslinkedResidue created 1
ReferenceEntity created 1
GO_CellularComponent created 1
PathwayDiagram created 1
URL created 1
FunctionalStatusType created 1
ReferenceSequence created 1
Compartment created 1
EntityWithAccessionedSequence created 1
DatabaseIdentifier created 1
NonsenseMutation created 1
CellDevelopmentStep created 1
GO_MolecularFunction created 1
Polymer created 1
CrosslinkedResidue created 1
ReviewStatus created 1
EvidenceType created 1
CandidateSet created 1
LiteratureReference created 1
GO_BiologicalProcess created 1
PositiveGeneExpressionRegulation created 1
Complex created 1
NegativePrecedingEvent created 1
Regulation created 1
CellLineagePath modified +
ReferenceMolecule modified +
ReferenceIsoform modified +
StableIdentifierHistory modified +
TranscriptionalModification modified +
ReferenceDNASequence modified +
PhysicalEntity modified +
ReplacedResidue modified +
Cell modified +
ModifiedResidue modified +
Pathway modified +
FragmentReplacedModification modified +
PhysicalEntityCellType modified +
PsiMod modified +
ReferenceRNASequence modified +
_Release modified +
StableIdentifier modified +
Book modified +
_UpdateTracker modified +
RetractionStatus modified +
Reaction modified +
Species modified +
Publication modified +
ModifiedNucleotide modified +
ControlReference modified +
Summation modified +
ControlledVocabulary modified +
TranslationalModification modified +
NegativeRegulation modified +
MarkerReference modified +
DatabaseObject modified +
InterChainCrosslinkedResidue modified +
Affiliation modified +
RegulationReference modified +
ReferenceGeneProduct modified +
ReferenceTherapeutic modified +
AbstractModifiedResidue modified +
SequenceOntology modified +
Drug modified +
ExternalOntology modified +
ProteinDrug modified +
RNADrug modified +
FragmentModification modified +
DeletedControlledVocabulary modified +
GenomeEncodedEntity modified +
FunctionalStatus modified +
Taxon modified +
StableIdentifierReleaseStatus modified +
Polymerisation modified +
FragmentDeletionModification modified +
NegativePrecedingEventReason modified +
CellType modified +
ReferenceGroup modified +
Depolymerisation modified +
GO_CellularComponent modified +
ReferenceEntity modified +
IntraChainCrosslinkedResidue modified +
URL modified +
FunctionalStatusType modified +
ReferenceSequence modified +
PathwayDiagram modified +
DefinedSet modified +
NonsenseMutation modified +
CellDevelopmentStep modified +
ReviewStatus modified +
EvidenceType modified +
CrosslinkedResidue modified +
Polymer modified +
GO_MolecularFunction modified +
Compartment modified +
EntityWithAccessionedSequence modified +
DatabaseIdentifier modified +
Complex modified +
Regulation modified +
NegativePrecedingEvent modified +
GO_BiologicalProcess modified +
LiteratureReference modified +
CandidateSet modified +
PositiveGeneExpressionRegulation modified +
FrontPage modified +
GeneticallyModifiedResidue modified +
Event modified +
ReferenceDatabase modified +
NegativeGeneExpressionRegulation modified +
BlackBoxEvent modified +
CatalystActivity modified +
Disease modified +
OtherEntity modified +
InteractionEvent modified +
CatalystActivityReference modified +
_DeletedInstance modified +
EntityFunctionalStatus modified +
Anatomy modified +
InstanceEdit modified +
Requirement modified +
FragmentInsertionModification modified +
Person modified +
PositiveRegulation modified +
Figure modified +
SimpleEntity modified +
ChemicalDrug modified +
GroupModifiedResidue modified +
EntitySet modified +
_Deleted modified +
DrugActionType modified +
ReactionType modified +
ReactionlikeEvent modified +
FailedReaction modified +
BlackBoxEvent reviewed +
Reaction reviewed +
Depolymerisation reviewed +
CellLineagePath reviewed +
Event reviewed +
Polymerisation reviewed +
DefinedSet reviewed +
Cell reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
OtherEntity reviewed +
SimpleEntity reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
Drug reviewed +
CellDevelopmentStep reviewed +
Pathway reviewed +
Polymer reviewed +
FailedReaction reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
Complex reviewed +
RNADrug reviewed +
ReactionlikeEvent reviewed +
Pathway structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
Event structureModified +
CellLineagePath structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
Polymer authored 1
CellDevelopmentStep authored +
Pathway authored +
ProteinDrug authored 1
Drug authored 1
EntitySet authored 1
EntityWithAccessionedSequence authored 1
ChemicalDrug authored 1
SimpleEntity authored 1
RNADrug authored 1
ReactionlikeEvent authored +
Complex authored 1
GenomeEncodedEntity authored 1
CandidateSet authored 1
FailedReaction authored +
Polymerisation authored +
Event authored +
CellLineagePath authored +
Depolymerisation authored +
Reaction authored +
BlackBoxEvent authored +
InteractionEvent authored +
OtherEntity authored 1
PhysicalEntity authored 1
Cell authored 1
DefinedSet authored 1
CellLineagePath edited +
Event edited +
Polymerisation edited +
BlackBoxEvent edited +
Reaction edited +
Depolymerisation edited +
PhysicalEntity edited +
OtherEntity edited +
InteractionEvent edited +
DefinedSet edited +
Cell edited +
Pathway edited +
CellDevelopmentStep edited +
Polymer edited +
SimpleEntity edited +
ChemicalDrug edited +
EntitySet edited +
EntityWithAccessionedSequence edited +
ProteinDrug edited +
Drug edited +
Complex edited +
RNADrug edited +
ReactionlikeEvent edited +
FailedReaction edited +
CandidateSet edited +
GenomeEncodedEntity edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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