Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
PathwayDiagram modified +
ReferenceDNASequence modified +
ReferenceTherapeutic modified +
Publication modified +
DatabaseIdentifier modified +
NegativePrecedingEventReason modified +
Depolymerisation modified +
CatalystActivity modified +
_DeletedInstance modified +
EntitySet modified +
Anatomy modified +
PsiMod modified +
FunctionalStatusType modified +
InteractionEvent modified +
PositiveRegulation modified +
Summation modified +
_Release modified +
NonsenseMutation modified +
TranscriptionalModification modified +
ControlReference modified +
ReferenceMolecule modified +
GeneticallyModifiedResidue modified +
Event modified +
Regulation modified +
Complex modified +
ReferenceDatabase modified +
_Deleted modified +
InterChainCrosslinkedResidue modified +
ExternalOntology modified +
CellType modified +
ReplacedResidue modified +
TranslationalModification modified +
BlackBoxEvent modified +
StableIdentifierReleaseStatus modified +
GO_BiologicalProcess modified +
ReferenceEntity modified +
Polymer modified +
ReferenceGeneProduct modified +
GO_MolecularFunction modified +
EvidenceType modified +
DatabaseObject modified +
FunctionalStatus modified +
FragmentInsertionModification modified +
StableIdentifierHistory modified +
Drug modified +
ModifiedResidue modified +
ModifiedNucleotide modified +
FragmentDeletionModification modified +
LiteratureReference modified +
Cell modified +
StableIdentifier modified +
ReviewStatus modified +
ControlledVocabulary modified +
DefinedSet modified +
ReactionlikeEvent modified +
Reaction modified +
InstanceEdit modified +
FragmentModification modified +
RNADrug modified +
NegativeRegulation modified +
ReferenceRNASequence modified +
PhysicalEntityCellType modified +
OtherEntity modified +
Figure modified +
IntraChainCrosslinkedResidue modified +
Pathway modified +
DrugActionType modified +
ReferenceIsoform modified +
PhysicalEntity modified +
ChemicalDrug modified +
Polymerisation modified +
SequenceOntology modified +
FailedReaction modified +
_UpdateTracker modified +
NegativePrecedingEvent modified +
ReferenceGroup modified +
FrontPage modified +
Affiliation modified +
Book modified +
FragmentReplacedModification modified +
Compartment modified +
ReactionType modified +
AbstractModifiedResidue modified +
EntityFunctionalStatus modified +
RegulationReference modified +
ReferenceSequence modified +
URL modified +
MarkerReference modified +
GroupModifiedResidue modified +
CellDevelopmentStep modified +
GO_CellularComponent modified +
ProteinDrug modified +
Taxon modified +
RetractionStatus modified +
Person modified +
CrosslinkedResidue modified +
EntityWithAccessionedSequence modified +
CatalystActivityReference modified +
GenomeEncodedEntity modified +
DeletedControlledVocabulary modified +
Species modified +
PositiveGeneExpressionRegulation modified +
Requirement modified +
SimpleEntity modified +
CellLineagePath modified +
Disease modified +
CandidateSet modified +
NegativeGeneExpressionRegulation modified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
Pathway structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
Event structureModified +
CandidateSet authored 1
Cell authored 1
Drug authored 1
SimpleEntity authored 1
CellLineagePath authored +
Event authored +
Polymer authored 1
Polymerisation authored +
EntityWithAccessionedSequence authored 1
FailedReaction authored +
GenomeEncodedEntity authored 1
InteractionEvent authored +
Pathway authored +
BlackBoxEvent authored +
ProteinDrug authored 1
PhysicalEntity authored 1
ChemicalDrug authored 1
EntitySet authored 1
CellDevelopmentStep authored +
OtherEntity authored 1
Depolymerisation authored +
DefinedSet authored 1
Reaction authored +
ReactionlikeEvent authored +
Complex authored 1
RNADrug authored 1
CandidateSet reviewed +
Cell reviewed +
SimpleEntity reviewed +
Drug reviewed +
CellLineagePath reviewed +
Event reviewed +
Polymerisation reviewed +
Polymer reviewed +
EntityWithAccessionedSequence reviewed +
FailedReaction reviewed +
GenomeEncodedEntity reviewed +
Pathway reviewed +
InteractionEvent reviewed +
BlackBoxEvent reviewed +
ProteinDrug reviewed +
PhysicalEntity reviewed +
ChemicalDrug reviewed +
EntitySet reviewed +
CellDevelopmentStep reviewed +
OtherEntity reviewed +
Depolymerisation reviewed +
DefinedSet reviewed +
ReactionlikeEvent reviewed +
Reaction reviewed +
Complex reviewed +
RNADrug reviewed +
CandidateSet edited +
Cell edited +
Event edited +
CellLineagePath edited +
Drug edited +
SimpleEntity edited +
GenomeEncodedEntity edited +
FailedReaction edited +
EntityWithAccessionedSequence edited +
Polymerisation edited +
Polymer edited +
PhysicalEntity edited +
ChemicalDrug edited +
ProteinDrug edited +
BlackBoxEvent edited +
Pathway edited +
InteractionEvent edited +
EntitySet edited +
Depolymerisation edited +
CellDevelopmentStep edited +
OtherEntity edited +
RNADrug edited +
Complex edited +
ReactionlikeEvent edited +
Reaction edited +
DefinedSet edited +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
ControlReference created 1
TranscriptionalModification created 1
NonsenseMutation created 1
_Release created 1
ReferenceMolecule created 1
Event created 1
GeneticallyModifiedResidue created 1
Regulation created 1
ReferenceDNASequence created 1
PathwayDiagram created 1
CatalystActivity created 1
Depolymerisation created 1
_DeletedInstance created 1
NegativePrecedingEventReason created 1
DatabaseIdentifier created 1
Publication created 1
ReferenceTherapeutic created 1
Anatomy created 1
PsiMod created 1
EntitySet created 1
Summation created 1
PositiveRegulation created 1
FunctionalStatusType created 1
InteractionEvent created 1
GO_MolecularFunction created 1
EvidenceType created 1
ReferenceGeneProduct created 1
Polymer created 1
StableIdentifierHistory created 1
FunctionalStatus created 1
FragmentInsertionModification created 1
DatabaseObject created 1
ModifiedNucleotide created 1
ModifiedResidue created 1
Drug created 1
LiteratureReference created 1
Cell created 1
FragmentDeletionModification created 1
ReferenceDatabase created 1
Complex created 1
CellType created 1
ExternalOntology created 1
_Deleted created 1
InterChainCrosslinkedResidue created 1
TranslationalModification created 1
ReplacedResidue created 1
StableIdentifierReleaseStatus created 1
GO_BiologicalProcess created 1
ReferenceEntity created 1
BlackBoxEvent created 1
SequenceOntology created 1
FailedReaction created 1
Polymerisation created 1
ReferenceGroup created 1
NegativePrecedingEvent created 1
_UpdateTracker created 1
Affiliation created 1
FrontPage created 1
Compartment created 1
Book created 1
FragmentReplacedModification created 1
RNADrug created 1
InstanceEdit created 1
FragmentModification created 1
ReactionlikeEvent created 1
Reaction created 1
ControlledVocabulary created 1
ReviewStatus created 1
DefinedSet created 1
StableIdentifier created 1
OtherEntity created 1
PhysicalEntityCellType created 1
ReferenceRNASequence created 1
NegativeRegulation created 1
IntraChainCrosslinkedResidue created 1
Figure created 1
ChemicalDrug created 1
PhysicalEntity created 1
ReferenceIsoform created 1
Pathway created 1
DrugActionType created 1
GenomeEncodedEntity created 1
CatalystActivityReference created 1
Person created 1
EntityWithAccessionedSequence created 1
RetractionStatus created 1
CrosslinkedResidue created 1
PositiveGeneExpressionRegulation created 1
DeletedControlledVocabulary created 1
Species created 1
Disease created 1
CellLineagePath created 1
Requirement created 1
SimpleEntity created 1
NegativeGeneExpressionRegulation created 1
CandidateSet created 1
URL created 1
RegulationReference created 1
ReferenceSequence created 1
EntityFunctionalStatus created 1
AbstractModifiedResidue created 1
ReactionType created 1
MarkerReference created 1
GroupModifiedResidue created 1
CellDevelopmentStep created 1
GO_CellularComponent created 1
Taxon created 1
ProteinDrug created 1
Event revised +
CellLineagePath revised +
SimpleEntity revised +
Drug revised +
Cell revised +
CandidateSet revised +
GenomeEncodedEntity revised +
FailedReaction revised +
Polymerisation revised +
Polymer revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
ProteinDrug revised +
PhysicalEntity revised +
ChemicalDrug revised +
BlackBoxEvent revised +
InteractionEvent revised +
Pathway revised +
RNADrug revised +
Reaction revised +
ReactionlikeEvent revised +
Complex revised +
DefinedSet revised +
Depolymerisation revised +
OtherEntity revised +
CellDevelopmentStep revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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