Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
Polymerisation reviewed +
Event reviewed +
ProteinDrug reviewed +
SimpleEntity reviewed +
Drug reviewed +
CellLineagePath reviewed +
Depolymerisation reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
RNADrug reviewed +
EntityWithAccessionedSequence reviewed +
CellDevelopmentStep reviewed +
FailedReaction reviewed +
OtherEntity reviewed +
Reaction reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
DefinedSet reviewed +
Pathway reviewed +
ReactionlikeEvent reviewed +
EntitySet reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
Cell reviewed +
ChemicalDrug created 1
PsiMod created 1
Polymer created 1
Person created 1
NonsenseMutation created 1
Regulation created 1
InteractionEvent created 1
NegativeRegulation created 1
ModifiedResidue created 1
Pathway created 1
DeletedControlledVocabulary created 1
ModifiedNucleotide created 1
CellLineagePath created 1
CatalystActivity created 1
AbstractModifiedResidue created 1
StableIdentifierReleaseStatus created 1
Book created 1
DatabaseObject created 1
CatalystActivityReference created 1
FragmentModification created 1
ReviewStatus created 1
NegativeGeneExpressionRegulation created 1
Reaction created 1
NegativePrecedingEvent created 1
RNADrug created 1
Anatomy created 1
ReferenceDatabase created 1
GeneticallyModifiedResidue created 1
PhysicalEntity created 1
DrugActionType created 1
FragmentInsertionModification created 1
ReactionlikeEvent created 1
Species created 1
PhysicalEntityCellType created 1
NegativePrecedingEventReason created 1
TranscriptionalModification created 1
_Release created 1
Summation created 1
PositiveGeneExpressionRegulation created 1
Complex created 1
InstanceEdit created 1
_UpdateTracker created 1
ReferenceTherapeutic created 1
RegulationReference created 1
FragmentDeletionModification created 1
EvidenceType created 1
CandidateSet created 1
MarkerReference created 1
DefinedSet created 1
ReferenceEntity created 1
OtherEntity created 1
FailedReaction created 1
RetractionStatus created 1
CellDevelopmentStep created 1
Figure created 1
GO_MolecularFunction created 1
ReferenceMolecule created 1
Cell created 1
Requirement created 1
ReferenceRNASequence created 1
ControlledVocabulary created 1
EntitySet created 1
CellType created 1
IntraChainCrosslinkedResidue created 1
ReactionType created 1
ReferenceGroup created 1
_Deleted created 1
SequenceOntology created 1
URL created 1
ReferenceSequence created 1
InterChainCrosslinkedResidue created 1
Drug created 1
GO_BiologicalProcess created 1
ProteinDrug created 1
StableIdentifierHistory created 1
ReplacedResidue created 1
FunctionalStatusType created 1
Taxon created 1
GenomeEncodedEntity created 1
PathwayDiagram created 1
DatabaseIdentifier created 1
Compartment created 1
ReferenceGeneProduct created 1
EntityWithAccessionedSequence created 1
TranslationalModification created 1
ReferenceDNASequence created 1
Disease created 1
GroupModifiedResidue created 1
FragmentReplacedModification created 1
ExternalOntology created 1
ControlReference created 1
Affiliation created 1
ReferenceIsoform created 1
CrosslinkedResidue created 1
Depolymerisation created 1
SimpleEntity created 1
EntityFunctionalStatus created 1
Event created 1
Polymerisation created 1
LiteratureReference created 1
BlackBoxEvent created 1
PositiveRegulation created 1
FrontPage created 1
StableIdentifier created 1
GO_CellularComponent created 1
Publication created 1
FunctionalStatus created 1
_DeletedInstance created 1
Reaction modified +
NegativeGeneExpressionRegulation modified +
NegativePrecedingEvent modified +
RNADrug modified +
Anatomy modified +
ReferenceDatabase modified +
PhysicalEntity modified +
GeneticallyModifiedResidue modified +
DrugActionType modified +
FragmentInsertionModification modified +
ReactionlikeEvent modified +
Species modified +
PhysicalEntityCellType modified +
NegativePrecedingEventReason modified +
TranscriptionalModification modified +
_Release modified +
Summation modified +
PositiveGeneExpressionRegulation modified +
Complex modified +
RegulationReference modified +
ReferenceTherapeutic modified +
FragmentDeletionModification modified +
InstanceEdit modified +
_UpdateTracker modified +
MarkerReference modified +
CandidateSet modified +
EvidenceType modified +
Polymer modified +
PsiMod modified +
ChemicalDrug modified +
Person modified +
NonsenseMutation modified +
Regulation modified +
NegativeRegulation modified +
InteractionEvent modified +
ModifiedResidue modified +
DeletedControlledVocabulary modified +
Pathway modified +
ModifiedNucleotide modified +
CellLineagePath modified +
CatalystActivity modified +
AbstractModifiedResidue modified +
StableIdentifierReleaseStatus modified +
Book modified +
ReviewStatus modified +
DatabaseObject modified +
CatalystActivityReference modified +
FragmentModification modified +
DatabaseIdentifier modified +
PathwayDiagram modified +
EntityWithAccessionedSequence modified +
TranslationalModification modified +
Compartment modified +
ReferenceGeneProduct modified +
ReferenceDNASequence modified +
Disease modified +
ExternalOntology modified +
FragmentReplacedModification modified +
GroupModifiedResidue modified +
ControlReference modified +
Affiliation modified +
Depolymerisation modified +
ReferenceIsoform modified +
CrosslinkedResidue modified +
Polymerisation modified +
Event modified +
EntityFunctionalStatus modified +
SimpleEntity modified +
BlackBoxEvent modified +
LiteratureReference modified +
PositiveRegulation modified +
FrontPage modified +
StableIdentifier modified +
GO_CellularComponent modified +
FunctionalStatus modified +
_DeletedInstance modified +
Publication modified +
ReferenceEntity modified +
DefinedSet modified +
FailedReaction modified +
OtherEntity modified +
CellDevelopmentStep modified +
RetractionStatus modified +
GO_MolecularFunction modified +
Figure modified +
ReferenceMolecule modified +
Cell modified +
ReferenceRNASequence modified +
Requirement modified +
IntraChainCrosslinkedResidue modified +
CellType modified +
ControlledVocabulary modified +
EntitySet modified +
ReferenceGroup modified +
ReactionType modified +
SequenceOntology modified +
URL modified +
_Deleted modified +
InterChainCrosslinkedResidue modified +
ReferenceSequence modified +
GO_BiologicalProcess modified +
Drug modified +
StableIdentifierHistory modified +
ProteinDrug modified +
ReplacedResidue modified +
FunctionalStatusType modified +
Taxon modified +
GenomeEncodedEntity modified +
DefinedSet revised +
ChemicalDrug revised +
Reaction revised +
Polymer revised +
OtherEntity revised +
FailedReaction revised +
EntityWithAccessionedSequence revised +
CellDevelopmentStep revised +
RNADrug revised +
Cell revised +
PhysicalEntity revised +
InteractionEvent revised +
EntitySet revised +
ReactionlikeEvent revised +
Pathway revised +
Depolymerisation revised +
CellLineagePath revised +
Drug revised +
SimpleEntity revised +
Polymerisation revised +
Event revised +
ProteinDrug revised +
BlackBoxEvent revised +
Complex revised +
CandidateSet revised +
GenomeEncodedEntity revised +
Pathway structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Reaction structureModified +
Depolymerisation structureModified +
Complex authored 1
BlackBoxEvent authored +
GenomeEncodedEntity authored 1
CandidateSet authored 1
CellLineagePath authored +
Depolymerisation authored +
SimpleEntity authored 1
Event authored +
Polymerisation authored +
ProteinDrug authored 1
Drug authored 1
PhysicalEntity authored 1
InteractionEvent authored +
Cell authored 1
Pathway authored +
EntitySet authored 1
ReactionlikeEvent authored +
OtherEntity authored 1
FailedReaction authored +
DefinedSet authored 1
ChemicalDrug authored 1
Reaction authored +
Polymer authored 1
RNADrug authored 1
CellDevelopmentStep authored +
EntityWithAccessionedSequence authored 1
EntitySet edited +
ReactionlikeEvent edited +
Pathway edited +
Cell edited +
PhysicalEntity edited +
InteractionEvent edited +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
RNADrug edited +
DefinedSet edited +
ChemicalDrug edited +
Reaction edited +
Polymer edited +
OtherEntity edited +
FailedReaction edited +
GenomeEncodedEntity edited +
CandidateSet edited +
BlackBoxEvent edited +
Complex edited +
Drug edited +
SimpleEntity edited +
Polymerisation edited +
ProteinDrug edited +
Event edited +
Depolymerisation edited +
CellLineagePath edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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