Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Complex reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
DefinedSet reviewed +
Reaction reviewed +
Polymer reviewed +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
OtherEntity reviewed +
RNADrug reviewed +
GenomeEncodedEntity reviewed +
Depolymerisation reviewed +
EntitySet reviewed +
FailedReaction reviewed +
Event reviewed +
Pathway reviewed +
SimpleEntity reviewed +
ProteinDrug reviewed +
PhysicalEntity reviewed +
Polymerisation reviewed +
InteractionEvent reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
CandidateSet reviewed +
CellLineagePath reviewed +
Drug reviewed +
GenomeEncodedEntity edited +
RNADrug edited +
EntitySet edited +
FailedReaction edited +
Depolymerisation edited +
EntityWithAccessionedSequence edited +
OtherEntity edited +
Polymer edited +
Reaction edited +
Cell edited +
ChemicalDrug edited +
Complex edited +
DefinedSet edited +
ReactionlikeEvent edited +
CellLineagePath edited +
CandidateSet edited +
Drug edited +
InteractionEvent edited +
Polymerisation edited +
CellDevelopmentStep edited +
BlackBoxEvent edited +
PhysicalEntity edited +
ProteinDrug edited +
Pathway edited +
SimpleEntity edited +
Event edited +
SimpleEntity authored 1
Pathway authored +
Event authored +
ProteinDrug authored 1
PhysicalEntity authored 1
InteractionEvent authored +
Polymerisation authored +
CellDevelopmentStep authored +
BlackBoxEvent authored +
CellLineagePath authored +
CandidateSet authored 1
Drug authored 1
ChemicalDrug authored 1
Complex authored 1
DefinedSet authored 1
ReactionlikeEvent authored +
Polymer authored 1
Reaction authored +
Cell authored 1
EntityWithAccessionedSequence authored 1
OtherEntity authored 1
GenomeEncodedEntity authored 1
RNADrug authored 1
EntitySet authored 1
FailedReaction authored +
Depolymerisation authored +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
InteractionEvent structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
Pathway structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
ReactionlikeEvent revised +
DefinedSet revised +
Complex revised +
ChemicalDrug revised +
Cell revised +
Reaction revised +
Polymer revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
Depolymerisation revised +
FailedReaction revised +
EntitySet revised +
RNADrug revised +
GenomeEncodedEntity revised +
Event revised +
SimpleEntity revised +
Pathway revised +
ProteinDrug revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
BlackBoxEvent revised +
Polymerisation revised +
InteractionEvent revised +
Drug revised +
CandidateSet revised +
CellLineagePath revised +
SequenceOntology modified +
CandidateSet modified +
Disease modified +
ExternalOntology modified +
CellLineagePath modified +
Drug modified +
PositiveGeneExpressionRegulation modified +
TranslationalModification modified +
Figure modified +
Regulation modified +
NegativeGeneExpressionRegulation modified +
StableIdentifierHistory modified +
FragmentReplacedModification modified +
Compartment modified +
Taxon modified +
ReferenceTherapeutic modified +
FragmentDeletionModification modified +
InstanceEdit modified +
PsiMod modified +
NegativePrecedingEventReason modified +
EvidenceType modified +
GO_BiologicalProcess modified +
ReferenceDNASequence modified +
ReferenceMolecule modified +
ReferenceGroup modified +
Cell modified +
PhysicalEntityCellType modified +
ChemicalDrug modified +
AbstractModifiedResidue modified +
GO_CellularComponent modified +
ReferenceRNASequence modified +
ModifiedNucleotide modified +
ReferenceDatabase modified +
RetractionStatus modified +
Book modified +
Summation modified +
_Release modified +
ReplacedResidue modified +
SimpleEntity modified +
IntraChainCrosslinkedResidue modified +
FailedReaction modified +
EntitySet modified +
EntityWithAccessionedSequence modified +
ModifiedResidue modified +
FragmentModification modified +
Polymer modified +
Complex modified +
ReactionType modified +
Anatomy modified +
DefinedSet modified +
ReferenceIsoform modified +
Affiliation modified +
StableIdentifierReleaseStatus modified +
InteractionEvent modified +
CellDevelopmentStep modified +
ControlReference modified +
DrugActionType modified +
RegulationReference modified +
DatabaseObject modified +
Requirement modified +
ReferenceEntity modified +
StableIdentifier modified +
FragmentInsertionModification modified +
LiteratureReference modified +
CatalystActivityReference modified +
CellType modified +
InterChainCrosslinkedResidue modified +
ReferenceGeneProduct modified +
Pathway modified +
ReferenceSequence modified +
RNADrug modified +
ControlledVocabulary modified +
GenomeEncodedEntity modified +
Depolymerisation modified +
FunctionalStatusType modified +
ReviewStatus modified +
OtherEntity modified +
GeneticallyModifiedResidue modified +
PathwayDiagram modified +
NegativePrecedingEvent modified +
NegativeRegulation modified +
_Deleted modified +
URL modified +
FunctionalStatus modified +
PositiveRegulation modified +
CrosslinkedResidue modified +
DeletedControlledVocabulary modified +
Polymerisation modified +
CatalystActivity modified +
EntityFunctionalStatus modified +
BlackBoxEvent modified +
NonsenseMutation modified +
_UpdateTracker modified +
Person modified +
_DeletedInstance modified +
ProteinDrug modified +
PhysicalEntity modified +
Event modified +
TranscriptionalModification modified +
Species modified +
DatabaseIdentifier modified +
GO_MolecularFunction modified +
Reaction modified +
GroupModifiedResidue modified +
Publication modified +
MarkerReference modified +
FrontPage modified +
ReactionlikeEvent modified +
PsiMod created 1
InstanceEdit created 1
FragmentDeletionModification created 1
EvidenceType created 1
GO_BiologicalProcess created 1
NegativePrecedingEventReason created 1
PhysicalEntityCellType created 1
GO_CellularComponent created 1
ChemicalDrug created 1
AbstractModifiedResidue created 1
ModifiedNucleotide created 1
ReferenceRNASequence created 1
ReferenceMolecule created 1
ReferenceDNASequence created 1
Cell created 1
ReferenceGroup created 1
Figure created 1
CellLineagePath created 1
ExternalOntology created 1
SequenceOntology created 1
CandidateSet created 1
Disease created 1
TranslationalModification created 1
PositiveGeneExpressionRegulation created 1
Drug created 1
Taxon created 1
StableIdentifierHistory created 1
Compartment created 1
FragmentReplacedModification created 1
ReferenceTherapeutic created 1
NegativeGeneExpressionRegulation created 1
Regulation created 1
ModifiedResidue created 1
EntityWithAccessionedSequence created 1
FragmentModification created 1
IntraChainCrosslinkedResidue created 1
FailedReaction created 1
EntitySet created 1
ReactionType created 1
Complex created 1
DefinedSet created 1
Anatomy created 1
Polymer created 1
ReferenceDatabase created 1
Book created 1
Summation created 1
SimpleEntity created 1
ReplacedResidue created 1
_Release created 1
RetractionStatus created 1
OtherEntity created 1
ReviewStatus created 1
FunctionalStatusType created 1
GenomeEncodedEntity created 1
ControlledVocabulary created 1
RNADrug created 1
Depolymerisation created 1
PositiveRegulation created 1
FunctionalStatus created 1
URL created 1
CrosslinkedResidue created 1
PathwayDiagram created 1
GeneticallyModifiedResidue created 1
NegativeRegulation created 1
_Deleted created 1
NegativePrecedingEvent created 1
InteractionEvent created 1
DrugActionType created 1
CellDevelopmentStep created 1
ControlReference created 1
Affiliation created 1
ReferenceIsoform created 1
StableIdentifierReleaseStatus created 1
LiteratureReference created 1
CatalystActivityReference created 1
Pathway created 1
ReferenceSequence created 1
CellType created 1
InterChainCrosslinkedResidue created 1
ReferenceGeneProduct created 1
RegulationReference created 1
DatabaseObject created 1
Requirement created 1
FragmentInsertionModification created 1
ReferenceEntity created 1
StableIdentifier created 1
GO_MolecularFunction created 1
DatabaseIdentifier created 1
Species created 1
TranscriptionalModification created 1
MarkerReference created 1
FrontPage created 1
Publication created 1
ReactionlikeEvent created 1
Reaction created 1
GroupModifiedResidue created 1
EntityFunctionalStatus created 1
CatalystActivity created 1
Polymerisation created 1
NonsenseMutation created 1
BlackBoxEvent created 1
DeletedControlledVocabulary created 1
Event created 1
_UpdateTracker created 1
Person created 1
PhysicalEntity created 1
ProteinDrug created 1
_DeletedInstance created 1
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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