Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
SimpleEntity authored 1
Depolymerisation authored +
Polymer authored 1
CellDevelopmentStep authored +
Complex authored 1
CandidateSet authored 1
Pathway authored +
CellLineagePath authored +
EntitySet authored 1
ReactionlikeEvent authored +
OtherEntity authored 1
PhysicalEntity authored 1
DefinedSet authored 1
ChemicalDrug authored 1
Reaction authored +
FailedReaction authored +
Event authored +
BlackBoxEvent authored +
Polymerisation authored +
InteractionEvent authored +
GenomeEncodedEntity authored 1
EntityWithAccessionedSequence authored 1
ProteinDrug authored 1
Cell authored 1
Drug authored 1
RNADrug authored 1
_Deleted replacementInstances +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
RNADrug edited +
Drug edited +
Cell edited +
Reaction edited +
ChemicalDrug edited +
DefinedSet edited +
PhysicalEntity edited +
Polymerisation edited +
Event edited +
BlackBoxEvent edited +
FailedReaction edited +
EntitySet edited +
CellLineagePath edited +
Pathway edited +
OtherEntity edited +
ReactionlikeEvent edited +
Polymer edited +
Depolymerisation edited +
SimpleEntity edited +
Complex edited +
CandidateSet edited +
CellDevelopmentStep edited +
EntitySet reviewed +
CellLineagePath reviewed +
Pathway reviewed +
OtherEntity reviewed +
ReactionlikeEvent reviewed +
Polymer reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
CandidateSet reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
EntityWithAccessionedSequence reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
GenomeEncodedEntity reviewed +
RNADrug reviewed +
Drug reviewed +
Cell reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
DefinedSet reviewed +
PhysicalEntity reviewed +
BlackBoxEvent reviewed +
Event reviewed +
Polymerisation reviewed +
FailedReaction reviewed +
BlackBoxEvent revised +
Event revised +
Polymerisation revised +
FailedReaction revised +
Reaction revised +
ChemicalDrug revised +
PhysicalEntity revised +
DefinedSet revised +
RNADrug revised +
Drug revised +
Cell revised +
EntityWithAccessionedSequence revised +
ProteinDrug revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
CandidateSet revised +
Complex revised +
CellDevelopmentStep revised +
Polymer revised +
Depolymerisation revised +
SimpleEntity revised +
OtherEntity revised +
ReactionlikeEvent revised +
CellLineagePath revised +
EntitySet revised +
Pathway revised +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
Depolymerisation structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
Event structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
Pathway structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
PhysicalEntity modified +
PsiMod modified +
GroupModifiedResidue modified +
DatabaseIdentifier modified +
ChemicalDrug modified +
Reaction modified +
Person modified +
InterChainCrosslinkedResidue modified +
Figure modified +
Book modified +
ProteinDrug modified +
Publication modified +
ReferenceDNASequence modified +
Cell modified +
TranslationalModification modified +
PhysicalEntityCellType modified +
MarkerReference modified +
RNADrug modified +
TranscriptionalModification modified +
_UpdateTracker modified +
Polymer modified +
IntraChainCrosslinkedResidue modified +
ModifiedResidue modified +
CellDevelopmentStep modified +
CandidateSet modified +
FunctionalStatusType modified +
Species modified +
ReferenceDatabase modified +
RegulationReference modified +
AbstractModifiedResidue modified +
Disease modified +
OtherEntity modified +
NegativeGeneExpressionRegulation modified +
FragmentReplacedModification modified +
Affiliation modified +
InstanceEdit modified +
Taxon modified +
_DeletedInstance modified +
BlackBoxEvent modified +
ReferenceIsoform modified +
GenomeEncodedEntity modified +
InteractionEvent modified +
ExternalOntology modified +
URL modified +
DeletedControlledVocabulary modified +
GO_BiologicalProcess modified +
Drug modified +
SimpleEntity modified +
Anatomy modified +
Summation modified +
ReviewStatus modified +
ControlReference modified +
ReactionType modified +
CellLineagePath modified +
ReactionlikeEvent modified +
GeneticallyModifiedResidue modified +
StableIdentifierReleaseStatus modified +
StableIdentifier modified +
SequenceOntology modified +
FunctionalStatus modified +
ReferenceMolecule modified +
FailedReaction modified +
Polymerisation modified +
Event modified +
EntityFunctionalStatus modified +
_Release modified +
EntityWithAccessionedSequence modified +
StableIdentifierHistory modified +
CellType modified +
GO_CellularComponent modified +
Depolymerisation modified +
ReplacedResidue modified +
Complex modified +
NonsenseMutation modified +
Regulation modified +
FragmentInsertionModification modified +
ModifiedNucleotide modified +
ReferenceGeneProduct modified +
CatalystActivityReference modified +
NegativeRegulation modified +
PathwayDiagram modified +
DefinedSet modified +
NegativePrecedingEvent modified +
ReferenceTherapeutic modified +
EvidenceType modified +
ControlledVocabulary modified +
ReferenceEntity modified +
Requirement modified +
FragmentDeletionModification modified +
NegativePrecedingEventReason modified +
GO_MolecularFunction modified +
RetractionStatus modified +
DatabaseObject modified +
FrontPage modified +
PositiveRegulation modified +
FragmentModification modified +
DrugActionType modified +
ReferenceSequence modified +
ReferenceGroup modified +
ReferenceRNASequence modified +
Pathway modified +
LiteratureReference modified +
_Deleted modified +
CatalystActivity modified +
EntitySet modified +
PositiveGeneExpressionRegulation modified +
Compartment modified +
CrosslinkedResidue modified +
ReferenceGroup created 1
ReferenceSequence created 1
DrugActionType created 1
FragmentModification created 1
PositiveRegulation created 1
Compartment created 1
CrosslinkedResidue created 1
PositiveGeneExpressionRegulation created 1
CatalystActivity created 1
_Deleted created 1
EntitySet created 1
LiteratureReference created 1
ReferenceRNASequence created 1
Pathway created 1
ReferenceTherapeutic created 1
NegativePrecedingEvent created 1
DefinedSet created 1
FrontPage created 1
DatabaseObject created 1
RetractionStatus created 1
NegativePrecedingEventReason created 1
GO_MolecularFunction created 1
FragmentDeletionModification created 1
Requirement created 1
EvidenceType created 1
ControlledVocabulary created 1
ReferenceEntity created 1
Regulation created 1
NonsenseMutation created 1
FragmentInsertionModification created 1
ReplacedResidue created 1
Complex created 1
Depolymerisation created 1
PathwayDiagram created 1
NegativeRegulation created 1
CatalystActivityReference created 1
ReferenceGeneProduct created 1
ModifiedNucleotide created 1
Polymerisation created 1
Event created 1
FailedReaction created 1
ReferenceMolecule created 1
FunctionalStatus created 1
StableIdentifier created 1
SequenceOntology created 1
StableIdentifierReleaseStatus created 1
GO_CellularComponent created 1
CellType created 1
StableIdentifierHistory created 1
_Release created 1
EntityWithAccessionedSequence created 1
EntityFunctionalStatus created 1
ReactionType created 1
ControlReference created 1
ReviewStatus created 1
Summation created 1
Anatomy created 1
SimpleEntity created 1
GeneticallyModifiedResidue created 1
ReactionlikeEvent created 1
CellLineagePath created 1
BlackBoxEvent created 1
Taxon created 1
_DeletedInstance created 1
InstanceEdit created 1
Affiliation created 1
FragmentReplacedModification created 1
Drug created 1
DeletedControlledVocabulary created 1
GO_BiologicalProcess created 1
URL created 1
GenomeEncodedEntity created 1
ExternalOntology created 1
InteractionEvent created 1
ReferenceIsoform created 1
FunctionalStatusType created 1
Species created 1
CandidateSet created 1
CellDevelopmentStep created 1
ModifiedResidue created 1
IntraChainCrosslinkedResidue created 1
Polymer created 1
_UpdateTracker created 1
TranscriptionalModification created 1
NegativeGeneExpressionRegulation created 1
OtherEntity created 1
Disease created 1
AbstractModifiedResidue created 1
RegulationReference created 1
ReferenceDatabase created 1
Person created 1
InterChainCrosslinkedResidue created 1
Reaction created 1
ChemicalDrug created 1
DatabaseIdentifier created 1
GroupModifiedResidue created 1
PsiMod created 1
PhysicalEntity created 1
PhysicalEntityCellType created 1
RNADrug created 1
MarkerReference created 1
TranslationalModification created 1
Cell created 1
ReferenceDNASequence created 1
Book created 1
ProteinDrug created 1
Publication created 1
Figure created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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