Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReferenceGroup created 1
URL created 1
ReferenceTherapeutic created 1
GenomeEncodedEntity created 1
StableIdentifier created 1
ControlledVocabulary created 1
ProteinDrug created 1
SimpleEntity created 1
RNADrug created 1
MarkerReference created 1
DatabaseIdentifier created 1
Polymerisation created 1
ReviewStatus created 1
ReferenceIsoform created 1
Reaction created 1
Book created 1
RetractionStatus created 1
EvidenceType created 1
GeneticallyModifiedResidue created 1
PsiMod created 1
Taxon created 1
DeletedControlledVocabulary created 1
DefinedSet created 1
FunctionalStatus created 1
GO_BiologicalProcess created 1
ControlReference created 1
CatalystActivity created 1
Drug created 1
DrugActionType created 1
Requirement created 1
EntityFunctionalStatus created 1
Pathway created 1
Disease created 1
FrontPage created 1
CatalystActivityReference created 1
PhysicalEntityCellType created 1
ReferenceGeneProduct created 1
NegativeRegulation created 1
CellType created 1
Anatomy created 1
FragmentInsertionModification created 1
LiteratureReference created 1
CellLineagePath created 1
NegativePrecedingEvent created 1
Summation created 1
PositiveRegulation created 1
CandidateSet created 1
PathwayDiagram created 1
CrosslinkedResidue created 1
RegulationReference created 1
EntityWithAccessionedSequence created 1
GO_CellularComponent created 1
_Release created 1
ReferenceSequence created 1
ReactionType created 1
InstanceEdit created 1
ReferenceMolecule created 1
SequenceOntology created 1
ReferenceDNASequence created 1
FragmentReplacedModification created 1
FunctionalStatusType created 1
Regulation created 1
PhysicalEntity created 1
Event created 1
NegativeGeneExpressionRegulation created 1
FragmentDeletionModification created 1
OtherEntity created 1
ReferenceDatabase created 1
Depolymerisation created 1
TranscriptionalModification created 1
Publication created 1
ModifiedNucleotide created 1
_Deleted created 1
ExternalOntology created 1
Cell created 1
DatabaseObject created 1
AbstractModifiedResidue created 1
FragmentModification created 1
ReferenceEntity created 1
InterChainCrosslinkedResidue created 1
Species created 1
GroupModifiedResidue created 1
ReferenceRNASequence created 1
NegativePrecedingEventReason created 1
Figure created 1
Person created 1
Polymer created 1
ReactionlikeEvent created 1
ModifiedResidue created 1
_UpdateTracker created 1
CellDevelopmentStep created 1
EntitySet created 1
Affiliation created 1
BlackBoxEvent created 1
GO_MolecularFunction created 1
TranslationalModification created 1
PositiveGeneExpressionRegulation created 1
NonsenseMutation created 1
StableIdentifierHistory created 1
_DeletedInstance created 1
Compartment created 1
InteractionEvent created 1
StableIdentifierReleaseStatus created 1
ReplacedResidue created 1
FailedReaction created 1
ChemicalDrug created 1
IntraChainCrosslinkedResidue created 1
Complex created 1
Pathway structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
Event structureModified +
InteractionEvent authored +
PhysicalEntity authored 1
Complex authored 1
ChemicalDrug authored 1
Event authored +
FailedReaction authored +
Pathway authored +
EntitySet authored 1
Drug authored 1
BlackBoxEvent authored +
EntityWithAccessionedSequence authored 1
Polymer authored 1
CandidateSet authored 1
Reaction authored +
Cell authored 1
CellDevelopmentStep authored +
DefinedSet authored 1
ReactionlikeEvent authored +
ProteinDrug authored 1
CellLineagePath authored +
GenomeEncodedEntity authored 1
Polymerisation authored +
Depolymerisation authored +
OtherEntity authored 1
RNADrug authored 1
SimpleEntity authored 1
Complex edited +
FailedReaction edited +
ChemicalDrug edited +
Event edited +
InteractionEvent edited +
PhysicalEntity edited +
BlackBoxEvent edited +
Pathway edited +
Drug edited +
EntitySet edited +
CellDevelopmentStep edited +
Cell edited +
ReactionlikeEvent edited +
DefinedSet edited +
EntityWithAccessionedSequence edited +
Reaction edited +
CandidateSet edited +
Polymer edited +
Polymerisation edited +
OtherEntity edited +
SimpleEntity edited +
RNADrug edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
CellLineagePath edited +
ProteinDrug edited +
PhysicalEntity revised +
InteractionEvent revised +
Event revised +
ChemicalDrug revised +
FailedReaction revised +
Complex revised +
EntitySet revised +
Drug revised +
Pathway revised +
BlackBoxEvent revised +
Polymer revised +
CandidateSet revised +
Reaction revised +
EntityWithAccessionedSequence revised +
DefinedSet revised +
ReactionlikeEvent revised +
Cell revised +
CellDevelopmentStep revised +
CellLineagePath revised +
ProteinDrug revised +
GenomeEncodedEntity revised +
Depolymerisation revised +
SimpleEntity revised +
OtherEntity revised +
RNADrug revised +
Polymerisation revised +
_Deleted replacementInstances +
Polymerisation reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
OtherEntity reviewed +
RNADrug reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
GenomeEncodedEntity reviewed +
Cell reviewed +
CellDevelopmentStep reviewed +
DefinedSet reviewed +
ReactionlikeEvent reviewed +
EntityWithAccessionedSequence reviewed +
Polymer reviewed +
CandidateSet reviewed +
Reaction reviewed +
BlackBoxEvent reviewed +
Pathway reviewed +
EntitySet reviewed +
Drug reviewed +
Complex reviewed +
ChemicalDrug reviewed +
Event reviewed +
FailedReaction reviewed +
InteractionEvent reviewed +
PhysicalEntity reviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
ReferenceDNASequence modified +
FragmentReplacedModification modified +
FunctionalStatusType modified +
Regulation modified +
PhysicalEntity modified +
Event modified +
NegativeGeneExpressionRegulation modified +
LiteratureReference modified +
CellLineagePath modified +
NegativePrecedingEvent modified +
Summation modified +
PositiveRegulation modified +
CandidateSet modified +
PathwayDiagram modified +
RegulationReference modified +
CrosslinkedResidue modified +
EntityWithAccessionedSequence modified +
GO_CellularComponent modified +
_Release modified +
ReactionType modified +
InstanceEdit modified +
ReferenceSequence modified +
ReferenceMolecule modified +
SequenceOntology modified +
Drug modified +
DrugActionType modified +
Requirement modified +
Pathway modified +
Disease modified +
EntityFunctionalStatus modified +
FrontPage modified +
CatalystActivityReference modified +
PhysicalEntityCellType modified +
NegativeRegulation modified +
ReferenceGeneProduct modified +
CellType modified +
FragmentInsertionModification modified +
Anatomy modified +
ReferenceGroup modified +
ReferenceTherapeutic modified +
URL modified +
GenomeEncodedEntity modified +
StableIdentifier modified +
ControlledVocabulary modified +
ProteinDrug modified +
SimpleEntity modified +
RNADrug modified +
MarkerReference modified +
DatabaseIdentifier modified +
ReviewStatus modified +
Polymerisation modified +
ReferenceIsoform modified +
Reaction modified +
Book modified +
RetractionStatus modified +
GeneticallyModifiedResidue modified +
PsiMod modified +
EvidenceType modified +
DeletedControlledVocabulary modified +
Taxon modified +
DefinedSet modified +
FunctionalStatus modified +
ControlReference modified +
GO_BiologicalProcess modified +
CatalystActivity modified +
EntitySet modified +
Affiliation modified +
GO_MolecularFunction modified +
BlackBoxEvent modified +
TranslationalModification modified +
PositiveGeneExpressionRegulation modified +
NonsenseMutation modified +
StableIdentifierHistory modified +
_DeletedInstance modified +
Compartment modified +
StableIdentifierReleaseStatus modified +
InteractionEvent modified +
ReplacedResidue modified +
FailedReaction modified +
ChemicalDrug modified +
IntraChainCrosslinkedResidue modified +
Complex modified +
NegativePrecedingEventReason modified +
ReferenceRNASequence modified +
GroupModifiedResidue modified +
Figure modified +
Person modified +
Polymer modified +
ReactionlikeEvent modified +
_UpdateTracker modified +
ModifiedResidue modified +
CellDevelopmentStep modified +
DatabaseObject modified +
AbstractModifiedResidue modified +
ReferenceEntity modified +
FragmentModification modified +
InterChainCrosslinkedResidue modified +
Species modified +
FragmentDeletionModification modified +
OtherEntity modified +
ReferenceDatabase modified +
Depolymerisation modified +
TranscriptionalModification modified +
ModifiedNucleotide modified +
Publication modified +
_Deleted modified +
Cell modified +
ExternalOntology modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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