Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
FailedReaction reviewed +
Cell reviewed +
Polymerisation reviewed +
Drug reviewed +
Pathway reviewed +
ChemicalDrug reviewed +
DefinedSet reviewed +
ProteinDrug reviewed +
CellDevelopmentStep reviewed +
Event reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
Reaction reviewed +
Complex reviewed +
InteractionEvent reviewed +
GenomeEncodedEntity reviewed +
CellLineagePath reviewed +
Polymer reviewed +
RNADrug reviewed +
EntitySet reviewed +
CandidateSet reviewed +
OtherEntity reviewed +
ReactionlikeEvent reviewed +
BlackBoxEvent reviewed +
InteractionEvent edited +
GenomeEncodedEntity edited +
Complex edited +
Reaction edited +
CellLineagePath edited +
Polymer edited +
RNADrug edited +
OtherEntity edited +
CandidateSet edited +
BlackBoxEvent edited +
ReactionlikeEvent edited +
EntitySet edited +
Pathway edited +
ChemicalDrug edited +
Polymerisation edited +
Cell edited +
FailedReaction edited +
Drug edited +
Event edited +
CellDevelopmentStep edited +
SimpleEntity edited +
Depolymerisation edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
ProteinDrug edited +
DefinedSet edited +
OtherEntity revised +
CandidateSet revised +
ReactionlikeEvent revised +
BlackBoxEvent revised +
EntitySet revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
Complex revised +
Reaction revised +
Polymer revised +
CellLineagePath revised +
RNADrug revised +
Event revised +
CellDevelopmentStep revised +
SimpleEntity revised +
Depolymerisation revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
ProteinDrug revised +
DefinedSet revised +
Pathway revised +
ChemicalDrug revised +
Polymerisation revised +
Cell revised +
FailedReaction revised +
Drug revised +
GroupModifiedResidue modified +
_Deleted modified +
PositiveRegulation modified +
Pathway modified +
FragmentReplacedModification modified +
Polymerisation modified +
AbstractModifiedResidue modified +
StableIdentifierHistory modified +
ReferenceSequence modified +
Regulation modified +
FunctionalStatus modified +
MarkerReference modified +
ReferenceIsoform modified +
TranslationalModification modified +
Species modified +
Figure modified +
_DeletedInstance modified +
Taxon modified +
ControlReference modified +
OtherEntity modified +
InterChainCrosslinkedResidue modified +
DrugActionType modified +
ReferenceGeneProduct modified +
ReviewStatus modified +
GO_MolecularFunction modified +
Drug modified +
TranscriptionalModification modified +
CatalystActivityReference modified +
Cell modified +
Depolymerisation modified +
CellDevelopmentStep modified +
RetractionStatus modified +
SequenceOntology modified +
DefinedSet modified +
Requirement modified +
ProteinDrug modified +
PositiveGeneExpressionRegulation modified +
NegativePrecedingEventReason modified +
EvidenceType modified +
Publication modified +
ReferenceTherapeutic modified +
GeneticallyModifiedResidue modified +
ModifiedNucleotide modified +
RNADrug modified +
Polymer modified +
ModifiedResidue modified +
Reaction modified +
ReactionType modified +
ControlledVocabulary modified +
Book modified +
FrontPage modified +
_UpdateTracker modified +
EntityFunctionalStatus modified +
ChemicalDrug modified +
Affiliation modified +
PsiMod modified +
Compartment modified +
PhysicalEntity modified +
EntityWithAccessionedSequence modified +
SimpleEntity modified +
NegativePrecedingEvent modified +
ReplacedResidue modified +
ReferenceDatabase modified +
PathwayDiagram modified +
ReferenceEntity modified +
CrosslinkedResidue modified +
DatabaseObject modified +
ReferenceMolecule modified +
DatabaseIdentifier modified +
IntraChainCrosslinkedResidue modified +
ReferenceRNASequence modified +
Complex modified +
GenomeEncodedEntity modified +
InteractionEvent modified +
PhysicalEntityCellType modified +
FragmentInsertionModification modified +
ReactionlikeEvent modified +
FragmentModification modified +
GO_BiologicalProcess modified +
NonsenseMutation modified +
NegativeGeneExpressionRegulation modified +
StableIdentifierReleaseStatus modified +
DeletedControlledVocabulary modified +
CatalystActivity modified +
FailedReaction modified +
RegulationReference modified +
URL modified +
ExternalOntology modified +
Person modified +
Event modified +
FunctionalStatusType modified +
StableIdentifier modified +
Summation modified +
FragmentDeletionModification modified +
LiteratureReference modified +
_Release modified +
GO_CellularComponent modified +
CellLineagePath modified +
InstanceEdit modified +
Disease modified +
CellType modified +
BlackBoxEvent modified +
ReferenceDNASequence modified +
CandidateSet modified +
NegativeRegulation modified +
Anatomy modified +
ReferenceGroup modified +
EntitySet modified +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
Reaction structureModified +
FailedReaction structureModified +
Polymer authored 1
CellLineagePath authored +
RNADrug authored 1
GenomeEncodedEntity authored 1
InteractionEvent authored +
Complex authored 1
Reaction authored +
EntitySet authored 1
BlackBoxEvent authored +
ReactionlikeEvent authored +
OtherEntity authored 1
CandidateSet authored 1
Drug authored 1
Polymerisation authored +
FailedReaction authored +
Cell authored 1
ChemicalDrug authored 1
Pathway authored +
ProteinDrug authored 1
DefinedSet authored 1
SimpleEntity authored 1
Depolymerisation authored +
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
Event authored +
CellDevelopmentStep authored +
GO_CellularComponent created 1
InstanceEdit created 1
CellLineagePath created 1
Disease created 1
CellType created 1
LiteratureReference created 1
_Release created 1
ReferenceGroup created 1
EntitySet created 1
ReferenceDNASequence created 1
BlackBoxEvent created 1
CandidateSet created 1
NegativeRegulation created 1
Anatomy created 1
CatalystActivity created 1
DeletedControlledVocabulary created 1
FailedReaction created 1
StableIdentifierReleaseStatus created 1
Summation created 1
StableIdentifier created 1
FragmentDeletionModification created 1
URL created 1
RegulationReference created 1
ExternalOntology created 1
Person created 1
FunctionalStatusType created 1
Event created 1
DatabaseIdentifier created 1
IntraChainCrosslinkedResidue created 1
ReferenceRNASequence created 1
Complex created 1
InteractionEvent created 1
GenomeEncodedEntity created 1
DatabaseObject created 1
CrosslinkedResidue created 1
ReferenceMolecule created 1
GO_BiologicalProcess created 1
NonsenseMutation created 1
NegativeGeneExpressionRegulation created 1
PhysicalEntityCellType created 1
FragmentInsertionModification created 1
ReactionlikeEvent created 1
FragmentModification created 1
PsiMod created 1
Compartment created 1
ChemicalDrug created 1
Affiliation created 1
ReferenceDatabase created 1
PathwayDiagram created 1
ReferenceEntity created 1
EntityWithAccessionedSequence created 1
PhysicalEntity created 1
SimpleEntity created 1
NegativePrecedingEvent created 1
ReplacedResidue created 1
ModifiedNucleotide created 1
GeneticallyModifiedResidue created 1
RNADrug created 1
Polymer created 1
ModifiedResidue created 1
Reaction created 1
PositiveGeneExpressionRegulation created 1
NegativePrecedingEventReason created 1
EvidenceType created 1
Publication created 1
ReferenceTherapeutic created 1
Book created 1
FrontPage created 1
_UpdateTracker created 1
EntityFunctionalStatus created 1
ReactionType created 1
ControlledVocabulary created 1
Drug created 1
Cell created 1
CatalystActivityReference created 1
TranscriptionalModification created 1
ReviewStatus created 1
GO_MolecularFunction created 1
SequenceOntology created 1
Requirement created 1
DefinedSet created 1
ProteinDrug created 1
Depolymerisation created 1
CellDevelopmentStep created 1
RetractionStatus created 1
ReferenceIsoform created 1
TranslationalModification created 1
Species created 1
Figure created 1
Regulation created 1
FunctionalStatus created 1
MarkerReference created 1
DrugActionType created 1
InterChainCrosslinkedResidue created 1
ReferenceGeneProduct created 1
_DeletedInstance created 1
Taxon created 1
OtherEntity created 1
ControlReference created 1
FragmentReplacedModification created 1
Polymerisation created 1
GroupModifiedResidue created 1
_Deleted created 1
PositiveRegulation created 1
Pathway created 1
StableIdentifierHistory created 1
ReferenceSequence created 1
AbstractModifiedResidue created 1
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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