Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
DefinedSet reviewed +
Polymerisation reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
Polymer reviewed +
Event reviewed +
OtherEntity reviewed +
Reaction reviewed +
CandidateSet reviewed +
EntitySet reviewed +
Depolymerisation reviewed +
ProteinDrug reviewed +
EntityWithAccessionedSequence reviewed +
Cell reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
PhysicalEntity reviewed +
RNADrug reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
Pathway reviewed +
CellDevelopmentStep reviewed +
Drug reviewed +
Polymer edited +
ChemicalDrug edited +
BlackBoxEvent edited +
Polymerisation edited +
DefinedSet edited +
Depolymerisation edited +
EntityWithAccessionedSequence edited +
Cell edited +
ProteinDrug edited +
Event edited +
EntitySet edited +
CandidateSet edited +
Reaction edited +
OtherEntity edited +
InteractionEvent edited +
PhysicalEntity edited +
CellLineagePath edited +
GenomeEncodedEntity edited +
SimpleEntity edited +
FailedReaction edited +
Drug edited +
Complex edited +
ReactionlikeEvent edited +
RNADrug edited +
CellDevelopmentStep edited +
Pathway edited +
Complex authored 1
ReactionlikeEvent authored +
RNADrug authored 1
Pathway authored +
CellDevelopmentStep authored +
Drug authored 1
CellLineagePath authored +
GenomeEncodedEntity authored 1
SimpleEntity authored 1
FailedReaction authored +
InteractionEvent authored +
PhysicalEntity authored 1
Event authored +
EntitySet authored 1
CandidateSet authored 1
Reaction authored +
OtherEntity authored 1
Depolymerisation authored +
Cell authored 1
EntityWithAccessionedSequence authored 1
ProteinDrug authored 1
BlackBoxEvent authored +
DefinedSet authored 1
Polymerisation authored +
Polymer authored 1
ChemicalDrug authored 1
BlackBoxEvent revised +
DefinedSet revised +
Polymerisation revised +
Polymer revised +
ChemicalDrug revised +
Event revised +
Reaction revised +
CandidateSet revised +
EntitySet revised +
OtherEntity revised +
Depolymerisation revised +
EntityWithAccessionedSequence revised +
Cell revised +
ProteinDrug revised +
CellLineagePath revised +
SimpleEntity revised +
FailedReaction revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
PhysicalEntity revised +
ReactionlikeEvent revised +
Complex revised +
RNADrug revised +
Pathway revised +
CellDevelopmentStep revised +
Drug revised +
_Deleted replacementInstances +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
Pathway structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
Disease modified +
Drug modified +
CellDevelopmentStep modified +
PathwayDiagram modified +
MarkerReference modified +
LiteratureReference modified +
GO_BiologicalProcess modified +
SimpleEntity modified +
Book modified +
GO_MolecularFunction modified +
Taxon modified +
CellLineagePath modified +
Depolymerisation modified +
_Deleted modified +
_DeletedInstance modified +
URL modified +
IntraChainCrosslinkedResidue modified +
RegulationReference modified +
ControlReference modified +
ExternalOntology modified +
Polymerisation modified +
DefinedSet modified +
ModifiedResidue modified +
DrugActionType modified +
StableIdentifier modified +
GO_CellularComponent modified +
RetractionStatus modified +
StableIdentifierHistory modified +
TranscriptionalModification modified +
TranslationalModification modified +
RNADrug modified +
Complex modified +
CellType modified +
Regulation modified +
InteractionEvent modified +
Species modified +
ReferenceDatabase modified +
ProteinDrug modified +
EntityFunctionalStatus modified +
EntitySet modified +
CandidateSet modified +
Summation modified +
Reaction modified +
FragmentInsertionModification modified +
ControlledVocabulary modified +
InstanceEdit modified +
ReferenceSequence modified +
Figure modified +
ReferenceTherapeutic modified +
NegativePrecedingEvent modified +
BlackBoxEvent modified +
PositiveGeneExpressionRegulation modified +
PhysicalEntityCellType modified +
ReactionlikeEvent modified +
DatabaseIdentifier modified +
InterChainCrosslinkedResidue modified +
GenomeEncodedEntity modified +
FunctionalStatusType modified +
PositiveRegulation modified +
GroupModifiedResidue modified +
ReferenceRNASequence modified +
CrosslinkedResidue modified +
SequenceOntology modified +
GeneticallyModifiedResidue modified +
NegativeRegulation modified +
EntityWithAccessionedSequence modified +
FragmentModification modified +
Cell modified +
ReferenceDNASequence modified +
ReferenceMolecule modified +
ReferenceIsoform modified +
ReferenceEntity modified +
OtherEntity modified +
ReactionType modified +
Affiliation modified +
Event modified +
ChemicalDrug modified +
Polymer modified +
NonsenseMutation modified +
_Release modified +
DatabaseObject modified +
NegativePrecedingEventReason modified +
PsiMod modified +
Requirement modified +
FrontPage modified +
Pathway modified +
FragmentReplacedModification modified +
CatalystActivityReference modified +
PhysicalEntity modified +
NegativeGeneExpressionRegulation modified +
Anatomy modified +
CatalystActivity modified +
Publication modified +
ReferenceGroup modified +
FailedReaction modified +
ModifiedNucleotide modified +
ReviewStatus modified +
EvidenceType modified +
_UpdateTracker modified +
FunctionalStatus modified +
ReplacedResidue modified +
FragmentDeletionModification modified +
ReferenceGeneProduct modified +
Compartment modified +
DeletedControlledVocabulary modified +
AbstractModifiedResidue modified +
Person modified +
StableIdentifierReleaseStatus modified +
NegativeRegulation created 1
GeneticallyModifiedResidue created 1
Cell created 1
FragmentModification created 1
EntityWithAccessionedSequence created 1
ReferenceDNASequence created 1
ReferenceMolecule created 1
ReferenceIsoform created 1
ReferenceEntity created 1
OtherEntity created 1
ReactionType created 1
Affiliation created 1
Event created 1
ChemicalDrug created 1
NonsenseMutation created 1
Polymer created 1
_Release created 1
PhysicalEntityCellType created 1
ReactionlikeEvent created 1
DatabaseIdentifier created 1
InterChainCrosslinkedResidue created 1
GenomeEncodedEntity created 1
FunctionalStatusType created 1
PositiveRegulation created 1
GroupModifiedResidue created 1
SequenceOntology created 1
ReferenceRNASequence created 1
CrosslinkedResidue created 1
EvidenceType created 1
ReviewStatus created 1
_UpdateTracker created 1
FunctionalStatus created 1
ReplacedResidue created 1
FragmentDeletionModification created 1
Compartment created 1
ReferenceGeneProduct created 1
AbstractModifiedResidue created 1
Person created 1
DeletedControlledVocabulary created 1
StableIdentifierReleaseStatus created 1
DatabaseObject created 1
PsiMod created 1
NegativePrecedingEventReason created 1
Requirement created 1
Pathway created 1
FrontPage created 1
FragmentReplacedModification created 1
CatalystActivityReference created 1
NegativeGeneExpressionRegulation created 1
Anatomy created 1
PhysicalEntity created 1
CatalystActivity created 1
ReferenceGroup created 1
Publication created 1
FailedReaction created 1
ModifiedNucleotide created 1
Depolymerisation created 1
_Deleted created 1
_DeletedInstance created 1
URL created 1
RegulationReference created 1
IntraChainCrosslinkedResidue created 1
ControlReference created 1
ExternalOntology created 1
Polymerisation created 1
ModifiedResidue created 1
DefinedSet created 1
DrugActionType created 1
StableIdentifier created 1
GO_CellularComponent created 1
Disease created 1
Drug created 1
CellDevelopmentStep created 1
PathwayDiagram created 1
MarkerReference created 1
LiteratureReference created 1
GO_BiologicalProcess created 1
SimpleEntity created 1
Book created 1
Taxon created 1
GO_MolecularFunction created 1
CellLineagePath created 1
ProteinDrug created 1
Summation created 1
EntityFunctionalStatus created 1
CandidateSet created 1
Reaction created 1
EntitySet created 1
FragmentInsertionModification created 1
ControlledVocabulary created 1
InstanceEdit created 1
Figure created 1
ReferenceSequence created 1
ReferenceTherapeutic created 1
NegativePrecedingEvent created 1
PositiveGeneExpressionRegulation created 1
BlackBoxEvent created 1
RetractionStatus created 1
StableIdentifierHistory created 1
TranscriptionalModification created 1
TranslationalModification created 1
RNADrug created 1
CellType created 1
Complex created 1
Regulation created 1
InteractionEvent created 1
Species created 1
ReferenceDatabase created 1
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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