Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent revised +
GenomeEncodedEntity revised +
OtherEntity revised +
DefinedSet revised +
CellLineagePath revised +
Polymerisation revised +
Polymer revised +
BlackBoxEvent revised +
Reaction revised +
ChemicalDrug revised +
ProteinDrug revised +
Event revised +
EntitySet revised +
CandidateSet revised +
RNADrug revised +
Cell revised +
CellDevelopmentStep revised +
Depolymerisation revised +
Drug revised +
InteractionEvent revised +
PhysicalEntity revised +
FailedReaction revised +
Pathway revised +
SimpleEntity revised +
Complex revised +
EntityWithAccessionedSequence revised +
_Deleted replacementInstances +
NegativePrecedingEvent created 1
Depolymerisation created 1
SequenceOntology created 1
Drug created 1
Anatomy created 1
ControlledVocabulary created 1
DatabaseObject created 1
NonsenseMutation created 1
FailedReaction created 1
ReferenceGroup created 1
NegativeGeneExpressionRegulation created 1
Affiliation created 1
Polymerisation created 1
Species created 1
FragmentReplacedModification created 1
FrontPage created 1
Reaction created 1
Summation created 1
ChemicalDrug created 1
ReferenceSequence created 1
ReferenceRNASequence created 1
GO_MolecularFunction created 1
ModifiedResidue created 1
DatabaseIdentifier created 1
TranscriptionalModification created 1
Cell created 1
ReferenceDNASequence created 1
GroupModifiedResidue created 1
GO_BiologicalProcess created 1
CellDevelopmentStep created 1
DeletedControlledVocabulary created 1
InteractionEvent created 1
CatalystActivity created 1
Figure created 1
ReferenceTherapeutic created 1
EntityWithAccessionedSequence created 1
ReferenceMolecule created 1
ReferenceEntity created 1
PathwayDiagram created 1
NegativeRegulation created 1
CatalystActivityReference created 1
InterChainCrosslinkedResidue created 1
GenomeEncodedEntity created 1
ReactionlikeEvent created 1
OtherEntity created 1
ControlReference created 1
Compartment created 1
GO_CellularComponent created 1
Polymer created 1
StableIdentifierHistory created 1
CrosslinkedResidue created 1
ModifiedNucleotide created 1
ReferenceDatabase created 1
ReactionType created 1
BlackBoxEvent created 1
DrugActionType created 1
Event created 1
Person created 1
CellType created 1
_Release created 1
StableIdentifier created 1
AbstractModifiedResidue created 1
ReviewStatus created 1
Pathway created 1
Publication created 1
Complex created 1
TranslationalModification created 1
NegativePrecedingEventReason created 1
FunctionalStatusType created 1
RetractionStatus created 1
Book created 1
_Deleted created 1
URL created 1
ReferenceIsoform created 1
IntraChainCrosslinkedResidue created 1
ExternalOntology created 1
_UpdateTracker created 1
FragmentDeletionModification created 1
PsiMod created 1
CandidateSet created 1
Requirement created 1
ReferenceGeneProduct created 1
PhysicalEntity created 1
Disease created 1
PhysicalEntityCellType created 1
PositiveRegulation created 1
SimpleEntity created 1
Regulation created 1
EvidenceType created 1
GeneticallyModifiedResidue created 1
FragmentInsertionModification created 1
FunctionalStatus created 1
DefinedSet created 1
CellLineagePath created 1
Taxon created 1
RegulationReference created 1
PositiveGeneExpressionRegulation created 1
FragmentModification created 1
EntityFunctionalStatus created 1
StableIdentifierReleaseStatus created 1
ProteinDrug created 1
LiteratureReference created 1
MarkerReference created 1
RNADrug created 1
_DeletedInstance created 1
InstanceEdit created 1
EntitySet created 1
ReplacedResidue created 1
Cell authored 1
Drug authored 1
Depolymerisation authored +
CellDevelopmentStep authored +
InteractionEvent authored +
PhysicalEntity authored 1
FailedReaction authored +
Complex authored 1
SimpleEntity authored 1
Pathway authored +
EntityWithAccessionedSequence authored 1
DefinedSet authored 1
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
OtherEntity authored 1
Polymer authored 1
Polymerisation authored +
CellLineagePath authored +
BlackBoxEvent authored +
Reaction authored +
ProteinDrug authored 1
ChemicalDrug authored 1
EntitySet authored 1
RNADrug authored 1
CandidateSet authored 1
Event authored +
Affiliation modified +
NegativeGeneExpressionRegulation modified +
Species modified +
Polymerisation modified +
Reaction modified +
FragmentReplacedModification modified +
FrontPage modified +
ModifiedResidue modified +
DatabaseIdentifier modified +
ChemicalDrug modified +
ReferenceSequence modified +
Summation modified +
ReferenceRNASequence modified +
GO_MolecularFunction modified +
Depolymerisation modified +
SequenceOntology modified +
Drug modified +
NegativePrecedingEvent modified +
NonsenseMutation modified +
ControlledVocabulary modified +
DatabaseObject modified +
Anatomy modified +
FailedReaction modified +
ReferenceGroup modified +
ReactionlikeEvent modified +
OtherEntity modified +
GenomeEncodedEntity modified +
ControlReference modified +
NegativeRegulation modified +
InterChainCrosslinkedResidue modified +
CatalystActivityReference modified +
StableIdentifierHistory modified +
CrosslinkedResidue modified +
GO_CellularComponent modified +
Compartment modified +
Polymer modified +
ReactionType modified +
DrugActionType modified +
BlackBoxEvent modified +
ModifiedNucleotide modified +
ReferenceDatabase modified +
Event modified +
Person modified +
CellDevelopmentStep modified +
GO_BiologicalProcess modified +
DeletedControlledVocabulary modified +
Cell modified +
TranscriptionalModification modified +
GroupModifiedResidue modified +
ReferenceDNASequence modified +
Figure modified +
InteractionEvent modified +
CatalystActivity modified +
ReferenceTherapeutic modified +
PathwayDiagram modified +
EntityWithAccessionedSequence modified +
ReferenceEntity modified +
ReferenceMolecule modified +
Book modified +
_Deleted modified +
IntraChainCrosslinkedResidue modified +
URL modified +
ReferenceIsoform modified +
_UpdateTracker modified +
FragmentDeletionModification modified +
ExternalOntology modified +
CandidateSet modified +
PsiMod modified +
CellType modified +
StableIdentifier modified +
_Release modified +
Publication modified +
Pathway modified +
TranslationalModification modified +
Complex modified +
ReviewStatus modified +
AbstractModifiedResidue modified +
NegativePrecedingEventReason modified +
FunctionalStatusType modified +
RetractionStatus modified +
DefinedSet modified +
FunctionalStatus modified +
FragmentInsertionModification modified +
CellLineagePath modified +
Taxon modified +
RegulationReference modified +
MarkerReference modified +
InstanceEdit modified +
_DeletedInstance modified +
RNADrug modified +
EntitySet modified +
ReplacedResidue modified +
FragmentModification modified +
EntityFunctionalStatus modified +
PositiveGeneExpressionRegulation modified +
LiteratureReference modified +
StableIdentifierReleaseStatus modified +
ProteinDrug modified +
ReferenceGeneProduct modified +
Requirement modified +
PhysicalEntity modified +
Disease modified +
PositiveRegulation modified +
SimpleEntity modified +
Regulation modified +
PhysicalEntityCellType modified +
EvidenceType modified +
GeneticallyModifiedResidue modified +
BlackBoxEvent reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
ProteinDrug reviewed +
Event reviewed +
EntitySet reviewed +
RNADrug reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
OtherEntity reviewed +
DefinedSet reviewed +
Polymerisation reviewed +
CellLineagePath reviewed +
Polymer reviewed +
FailedReaction reviewed +
Pathway reviewed +
SimpleEntity reviewed +
Complex reviewed +
EntityWithAccessionedSequence reviewed +
Cell reviewed +
Depolymerisation reviewed +
CellDevelopmentStep reviewed +
Drug reviewed +
InteractionEvent reviewed +
PhysicalEntity reviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
FailedReaction structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
Pathway structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
ReactionlikeEvent edited +
OtherEntity edited +
GenomeEncodedEntity edited +
DefinedSet edited +
Polymerisation edited +
CellLineagePath edited +
Polymer edited +
BlackBoxEvent edited +
Reaction edited +
ChemicalDrug edited +
ProteinDrug edited +
Event edited +
EntitySet edited +
CandidateSet edited +
RNADrug edited +
Cell edited +
Depolymerisation edited +
CellDevelopmentStep edited +
Drug edited +
InteractionEvent edited +
PhysicalEntity edited +
FailedReaction edited +
SimpleEntity edited +
Pathway edited +
Complex edited +
EntityWithAccessionedSequence edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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