Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
_Deleted replacementInstances +
RNADrug reviewed +
Event reviewed +
BlackBoxEvent reviewed +
Cell reviewed +
ReactionlikeEvent reviewed +
Drug reviewed +
CellLineagePath reviewed +
PhysicalEntity reviewed +
Depolymerisation reviewed +
InteractionEvent reviewed +
Pathway reviewed +
OtherEntity reviewed +
Reaction reviewed +
ProteinDrug reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
EntitySet reviewed +
ChemicalDrug reviewed +
DefinedSet reviewed +
Polymerisation reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
FailedReaction reviewed +
Polymer reviewed +
BlackBoxEvent structureModified +
Event structureModified +
Reaction structureModified +
Pathway structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
OtherEntity revised +
Reaction revised +
ProteinDrug revised +
InteractionEvent revised +
Pathway revised +
CellDevelopmentStep revised +
Complex revised +
ReactionlikeEvent revised +
Cell revised +
PhysicalEntity revised +
Depolymerisation revised +
CellLineagePath revised +
Drug revised +
BlackBoxEvent revised +
RNADrug revised +
Event revised +
Polymer revised +
EntityWithAccessionedSequence revised +
FailedReaction revised +
Polymerisation revised +
SimpleEntity revised +
ChemicalDrug revised +
DefinedSet revised +
EntitySet revised +
GenomeEncodedEntity revised +
CandidateSet revised +
FragmentModification modified +
Polymer modified +
NonsenseMutation modified +
CellType modified +
Figure modified +
Regulation modified +
RetractionStatus modified +
NegativeGeneExpressionRegulation modified +
Compartment modified +
LiteratureReference modified +
StableIdentifierHistory modified +
ReferenceTherapeutic modified +
GenomeEncodedEntity modified +
StableIdentifier modified +
ControlReference modified +
FragmentInsertionModification modified +
Reaction modified +
ReactionlikeEvent modified +
ExternalOntology modified +
ReferenceEntity modified +
ReplacedResidue modified +
GO_MolecularFunction modified +
FragmentDeletionModification modified +
ModifiedResidue modified +
RNADrug modified +
TranscriptionalModification modified +
FailedReaction modified +
Affiliation modified +
FunctionalStatus modified +
SimpleEntity modified +
DatabaseObject modified +
FunctionalStatusType modified +
EntitySet modified +
CandidateSet modified +
OtherEntity modified +
Requirement modified +
PsiMod modified +
_DeletedInstance modified +
Drug modified +
CellLineagePath modified +
FragmentReplacedModification modified +
Anatomy modified +
ReactionType modified +
ReferenceRNASequence modified +
CatalystActivity modified +
NegativePrecedingEventReason modified +
ReferenceGeneProduct modified +
EvidenceType modified +
GeneticallyModifiedResidue modified +
Publication modified +
DeletedControlledVocabulary modified +
ReferenceIsoform modified +
Taxon modified +
Polymerisation modified +
_UpdateTracker modified +
ReferenceGroup modified +
URL modified +
ControlledVocabulary modified +
DefinedSet modified +
Species modified +
_Release modified +
GO_CellularComponent modified +
ReferenceDatabase modified +
ReferenceSequence modified +
EntityFunctionalStatus modified +
Complex modified +
ProteinDrug modified +
InteractionEvent modified +
PhysicalEntity modified +
Depolymerisation modified +
PhysicalEntityCellType modified +
DrugActionType modified +
Disease modified +
AbstractModifiedResidue modified +
EntityWithAccessionedSequence modified +
IntraChainCrosslinkedResidue modified +
NegativeRegulation modified +
InterChainCrosslinkedResidue modified +
ChemicalDrug modified +
ModifiedNucleotide modified +
DatabaseIdentifier modified +
FrontPage modified +
PositiveGeneExpressionRegulation modified +
ReferenceMolecule modified +
PositiveRegulation modified +
ReferenceDNASequence modified +
Book modified +
_Deleted modified +
MarkerReference modified +
SequenceOntology modified +
CellDevelopmentStep modified +
GO_BiologicalProcess modified +
CatalystActivityReference modified +
Pathway modified +
GroupModifiedResidue modified +
ReviewStatus modified +
InstanceEdit modified +
Summation modified +
TranslationalModification modified +
Cell modified +
StableIdentifierReleaseStatus modified +
BlackBoxEvent modified +
CrosslinkedResidue modified +
PathwayDiagram modified +
RegulationReference modified +
NegativePrecedingEvent modified +
Event modified +
Person modified +
Polymerisation edited +
SimpleEntity edited +
Polymer edited +
EntityWithAccessionedSequence edited +
FailedReaction edited +
GenomeEncodedEntity edited +
EntitySet edited +
CandidateSet edited +
DefinedSet edited +
ChemicalDrug edited +
ReactionlikeEvent edited +
Cell edited +
Depolymerisation edited +
PhysicalEntity edited +
Drug edited +
CellLineagePath edited +
OtherEntity edited +
Reaction edited +
ProteinDrug edited +
Pathway edited +
InteractionEvent edited +
Complex edited +
CellDevelopmentStep edited +
Event edited +
RNADrug edited +
BlackBoxEvent edited +
CatalystActivityReference created 1
Pathway created 1
SequenceOntology created 1
CellDevelopmentStep created 1
GO_BiologicalProcess created 1
TranslationalModification created 1
Cell created 1
GroupModifiedResidue created 1
ReviewStatus created 1
InstanceEdit created 1
Summation created 1
CrosslinkedResidue created 1
BlackBoxEvent created 1
StableIdentifierReleaseStatus created 1
RegulationReference created 1
NegativePrecedingEvent created 1
Event created 1
Person created 1
PathwayDiagram created 1
IntraChainCrosslinkedResidue created 1
EntityWithAccessionedSequence created 1
NegativeRegulation created 1
InterChainCrosslinkedResidue created 1
ModifiedNucleotide created 1
ChemicalDrug created 1
PositiveGeneExpressionRegulation created 1
FrontPage created 1
DatabaseIdentifier created 1
ReferenceMolecule created 1
MarkerReference created 1
ReferenceDNASequence created 1
PositiveRegulation created 1
Book created 1
_Deleted created 1
ProteinDrug created 1
InteractionEvent created 1
EntityFunctionalStatus created 1
Complex created 1
Depolymerisation created 1
PhysicalEntity created 1
PhysicalEntityCellType created 1
DrugActionType created 1
Disease created 1
AbstractModifiedResidue created 1
DeletedControlledVocabulary created 1
Publication created 1
Polymerisation created 1
_UpdateTracker created 1
Taxon created 1
ReferenceIsoform created 1
ControlledVocabulary created 1
DefinedSet created 1
ReferenceGroup created 1
URL created 1
GO_CellularComponent created 1
_Release created 1
ReferenceDatabase created 1
ReferenceSequence created 1
Species created 1
Requirement created 1
OtherEntity created 1
PsiMod created 1
FragmentReplacedModification created 1
_DeletedInstance created 1
CellLineagePath created 1
Drug created 1
ReactionType created 1
ReferenceRNASequence created 1
Anatomy created 1
GeneticallyModifiedResidue created 1
NegativePrecedingEventReason created 1
CatalystActivity created 1
ReferenceGeneProduct created 1
EvidenceType created 1
Affiliation created 1
FunctionalStatus created 1
TranscriptionalModification created 1
FailedReaction created 1
DatabaseObject created 1
SimpleEntity created 1
EntitySet created 1
CandidateSet created 1
FunctionalStatusType created 1
Reaction created 1
StableIdentifier created 1
FragmentInsertionModification created 1
ControlReference created 1
ReactionlikeEvent created 1
ReferenceEntity created 1
ReplacedResidue created 1
GO_MolecularFunction created 1
ExternalOntology created 1
ModifiedResidue created 1
RNADrug created 1
FragmentDeletionModification created 1
Figure created 1
Regulation created 1
FragmentModification created 1
Polymer created 1
NonsenseMutation created 1
CellType created 1
RetractionStatus created 1
LiteratureReference created 1
StableIdentifierHistory created 1
NegativeGeneExpressionRegulation created 1
Compartment created 1
GenomeEncodedEntity created 1
ReferenceTherapeutic created 1
CandidateSet authored 1
GenomeEncodedEntity authored 1
EntitySet authored 1
DefinedSet authored 1
ChemicalDrug authored 1
SimpleEntity authored 1
Polymerisation authored +
EntityWithAccessionedSequence authored 1
FailedReaction authored +
Polymer authored 1
RNADrug authored 1
Event authored +
BlackBoxEvent authored +
Drug authored 1
CellLineagePath authored +
Depolymerisation authored +
PhysicalEntity authored 1
ReactionlikeEvent authored +
Cell authored 1
CellDevelopmentStep authored +
Complex authored 1
InteractionEvent authored +
Pathway authored +
ProteinDrug authored 1
Reaction authored +
OtherEntity authored 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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