Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Depolymerisation authored +
Cell authored 1
Pathway authored +
GenomeEncodedEntity authored 1
ProteinDrug authored 1
Polymer authored 1
PhysicalEntity authored 1
Complex authored 1
ChemicalDrug authored 1
Polymerisation authored +
CellLineagePath authored +
InteractionEvent authored +
BlackBoxEvent authored +
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
Reaction authored +
RNADrug authored 1
EntitySet authored 1
Drug authored 1
FailedReaction authored +
ReactionlikeEvent authored +
DefinedSet authored 1
Event authored +
CellDevelopmentStep authored +
SimpleEntity authored 1
OtherEntity authored 1
ReferenceRNASequence created 1
Summation created 1
FunctionalStatusType created 1
CatalystActivity created 1
ChemicalDrug created 1
StableIdentifierReleaseStatus created 1
CatalystActivityReference created 1
CrosslinkedResidue created 1
Person created 1
Depolymerisation created 1
ReferenceIsoform created 1
ReferenceDNASequence created 1
Species created 1
StableIdentifierHistory created 1
GenomeEncodedEntity created 1
SimpleEntity created 1
CellDevelopmentStep created 1
FrontPage created 1
CandidateSet created 1
ControlledVocabulary created 1
GroupModifiedResidue created 1
PsiMod created 1
ReviewStatus created 1
NegativePrecedingEvent created 1
CellType created 1
DrugActionType created 1
ProteinDrug created 1
RegulationReference created 1
StableIdentifier created 1
MarkerReference created 1
ReferenceGroup created 1
BlackBoxEvent created 1
EvidenceType created 1
PositiveGeneExpressionRegulation created 1
_UpdateTracker created 1
ReactionlikeEvent created 1
GeneticallyModifiedResidue created 1
SequenceOntology created 1
DeletedControlledVocabulary created 1
PathwayDiagram created 1
EntityFunctionalStatus created 1
_DeletedInstance created 1
ReferenceGeneProduct created 1
AbstractModifiedResidue created 1
Taxon created 1
InstanceEdit created 1
Affiliation created 1
GO_CellularComponent created 1
GO_MolecularFunction created 1
FailedReaction created 1
Polymer created 1
PhysicalEntity created 1
Publication created 1
Disease created 1
ReplacedResidue created 1
TranscriptionalModification created 1
Complex created 1
Polymerisation created 1
ReferenceDatabase created 1
ReferenceTherapeutic created 1
PositiveRegulation created 1
ModifiedResidue created 1
CellLineagePath created 1
FunctionalStatus created 1
GO_BiologicalProcess created 1
_Release created 1
ControlReference created 1
Pathway created 1
DatabaseIdentifier created 1
URL created 1
Anatomy created 1
RetractionStatus created 1
ModifiedNucleotide created 1
Regulation created 1
OtherEntity created 1
NegativePrecedingEventReason created 1
InterChainCrosslinkedResidue created 1
Requirement created 1
Reaction created 1
FragmentInsertionModification created 1
FragmentReplacedModification created 1
Drug created 1
Compartment created 1
ReferenceSequence created 1
FragmentDeletionModification created 1
LiteratureReference created 1
ReferenceEntity created 1
TranslationalModification created 1
InteractionEvent created 1
EntityWithAccessionedSequence created 1
ReferenceMolecule created 1
Figure created 1
IntraChainCrosslinkedResidue created 1
Cell created 1
ReactionType created 1
DatabaseObject created 1
PhysicalEntityCellType created 1
NegativeRegulation created 1
NonsenseMutation created 1
DefinedSet created 1
Event created 1
_Deleted created 1
FragmentModification created 1
RNADrug created 1
NegativeGeneExpressionRegulation created 1
EntitySet created 1
Book created 1
ExternalOntology created 1
InteractionEvent structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Event structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
Pathway structureModified +
Depolymerisation structureModified +
Reaction structureModified +
Pathway internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
_Deleted replacementInstances +
ReactionlikeEvent reviewed +
DefinedSet reviewed +
CellDevelopmentStep reviewed +
Event reviewed +
SimpleEntity reviewed +
OtherEntity reviewed +
Reaction reviewed +
CandidateSet reviewed +
RNADrug reviewed +
EntitySet reviewed +
Drug reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
Complex reviewed +
Polymerisation reviewed +
ChemicalDrug reviewed +
CellLineagePath reviewed +
InteractionEvent reviewed +
BlackBoxEvent reviewed +
EntityWithAccessionedSequence reviewed +
Depolymerisation reviewed +
Cell reviewed +
Pathway reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent revised +
OtherEntity revised +
SimpleEntity revised +
Event revised +
CellDevelopmentStep revised +
DefinedSet revised +
RNADrug revised +
Reaction revised +
CandidateSet revised +
FailedReaction revised +
EntitySet revised +
Drug revised +
Complex revised +
Polymer revised +
PhysicalEntity revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
InteractionEvent revised +
BlackBoxEvent revised +
CellLineagePath revised +
ChemicalDrug revised +
Polymerisation revised +
Cell revised +
Depolymerisation revised +
GenomeEncodedEntity revised +
Pathway revised +
EntitySet edited +
Drug edited +
FailedReaction edited +
CandidateSet edited +
Reaction edited +
RNADrug edited +
DefinedSet edited +
OtherEntity edited +
Event edited +
CellDevelopmentStep edited +
SimpleEntity edited +
ReactionlikeEvent edited +
Pathway edited +
GenomeEncodedEntity edited +
Depolymerisation edited +
Cell edited +
ChemicalDrug edited +
Polymerisation edited +
InteractionEvent edited +
BlackBoxEvent edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
Polymer edited +
PhysicalEntity edited +
ProteinDrug edited +
Complex edited +
ReferenceIsoform modified +
Depolymerisation modified +
Species modified +
ReferenceDNASequence modified +
StableIdentifierHistory modified +
GenomeEncodedEntity modified +
Summation modified +
ReferenceRNASequence modified +
CatalystActivity modified +
FunctionalStatusType modified +
CrosslinkedResidue modified +
ChemicalDrug modified +
StableIdentifierReleaseStatus modified +
CatalystActivityReference modified +
Person modified +
CandidateSet modified +
FrontPage modified +
PsiMod modified +
GroupModifiedResidue modified +
ControlledVocabulary modified +
ReviewStatus modified +
NegativePrecedingEvent modified +
CellType modified +
SimpleEntity modified +
CellDevelopmentStep modified +
PositiveGeneExpressionRegulation modified +
_UpdateTracker modified +
ProteinDrug modified +
DrugActionType modified +
MarkerReference modified +
StableIdentifier modified +
RegulationReference modified +
ReferenceGroup modified +
EvidenceType modified +
BlackBoxEvent modified +
ReferenceGeneProduct modified +
_DeletedInstance modified +
InstanceEdit modified +
Affiliation modified +
Taxon modified +
AbstractModifiedResidue modified +
GO_MolecularFunction modified +
GO_CellularComponent modified +
FailedReaction modified +
GeneticallyModifiedResidue modified +
ReactionlikeEvent modified +
SequenceOntology modified +
DeletedControlledVocabulary modified +
PathwayDiagram modified +
EntityFunctionalStatus modified +
_Release modified +
GO_BiologicalProcess modified +
FunctionalStatus modified +
ControlReference modified +
Pathway modified +
DatabaseIdentifier modified +
Disease modified +
Publication modified +
PhysicalEntity modified +
Polymer modified +
Complex modified +
TranscriptionalModification modified +
ReplacedResidue modified +
ReferenceDatabase modified +
ReferenceTherapeutic modified +
Polymerisation modified +
CellLineagePath modified +
ModifiedResidue modified +
PositiveRegulation modified +
FragmentInsertionModification modified +
Requirement modified +
Reaction modified +
FragmentReplacedModification modified +
Drug modified +
ReferenceSequence modified +
Compartment modified +
Anatomy modified +
URL modified +
ModifiedNucleotide modified +
RetractionStatus modified +
Regulation modified +
InterChainCrosslinkedResidue modified +
OtherEntity modified +
NegativePrecedingEventReason modified +
Cell modified +
ReactionType modified +
DatabaseObject modified +
PhysicalEntityCellType modified +
FragmentDeletionModification modified +
LiteratureReference modified +
ReferenceEntity modified +
TranslationalModification modified +
ReferenceMolecule modified +
Figure modified +
IntraChainCrosslinkedResidue modified +
InteractionEvent modified +
EntityWithAccessionedSequence modified +
FragmentModification modified +
NegativeGeneExpressionRegulation modified +
RNADrug modified +
Book modified +
EntitySet modified +
ExternalOntology modified +
NonsenseMutation modified +
NegativeRegulation modified +
DefinedSet modified +
Event modified +
_Deleted modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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