Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Complex revised +
ChemicalDrug revised +
Cell revised +
Polymerisation revised +
BlackBoxEvent revised +
FailedReaction revised +
EntityWithAccessionedSequence revised +
CellLineagePath revised +
GenomeEncodedEntity revised +
RNADrug revised +
Event revised +
SimpleEntity revised +
InteractionEvent revised +
DefinedSet revised +
EntitySet revised +
Reaction revised +
ProteinDrug revised +
PhysicalEntity revised +
CandidateSet revised +
CellDevelopmentStep revised +
Drug revised +
Depolymerisation revised +
OtherEntity revised +
ReactionlikeEvent revised +
Polymer revised +
Pathway revised +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
Reaction structureModified +
Pathway structureModified +
InteractionEvent structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
FragmentDeletionModification modified +
Person modified +
InteractionEvent modified +
DrugActionType modified +
ChemicalDrug modified +
EvidenceType modified +
ReferenceTherapeutic modified +
Summation modified +
ReferenceDatabase modified +
NonsenseMutation modified +
NegativePrecedingEvent modified +
StableIdentifier modified +
PhysicalEntityCellType modified +
_DeletedInstance modified +
GeneticallyModifiedResidue modified +
GO_MolecularFunction modified +
Pathway modified +
DefinedSet modified +
_Deleted modified +
RegulationReference modified +
ReferenceDNASequence modified +
ReferenceSequence modified +
ControlReference modified +
ReferenceMolecule modified +
GO_CellularComponent modified +
ReplacedResidue modified +
Figure modified +
CellType modified +
TranscriptionalModification modified +
Compartment modified +
CrosslinkedResidue modified +
FunctionalStatus modified +
CellLineagePath modified +
LiteratureReference modified +
FragmentInsertionModification modified +
NegativeRegulation modified +
SimpleEntity modified +
FrontPage modified +
Depolymerisation modified +
ReferenceGroup modified +
Regulation modified +
InterChainCrosslinkedResidue modified +
Disease modified +
StableIdentifierReleaseStatus modified +
ExternalOntology modified +
DeletedControlledVocabulary modified +
URL modified +
DatabaseIdentifier modified +
Taxon modified +
ReferenceRNASequence modified +
FragmentModification modified +
EntityWithAccessionedSequence modified +
ModifiedNucleotide modified +
BlackBoxEvent modified +
GO_BiologicalProcess modified +
Event modified +
Requirement modified +
Publication modified +
Complex modified +
PositiveGeneExpressionRegulation modified +
Cell modified +
ReactionType modified +
PositiveRegulation modified +
ReferenceEntity modified +
EntitySet modified +
EntityFunctionalStatus modified +
_UpdateTracker modified +
CatalystActivity modified +
ReviewStatus modified +
Reaction modified +
PhysicalEntity modified +
Drug modified +
CellDevelopmentStep modified +
GroupModifiedResidue modified +
_Release modified +
Species modified +
Affiliation modified +
FailedReaction modified +
Anatomy modified +
GenomeEncodedEntity modified +
RNADrug modified +
NegativePrecedingEventReason modified +
ReferenceIsoform modified +
ControlledVocabulary modified +
PsiMod modified +
SequenceOntology modified +
FunctionalStatusType modified +
RetractionStatus modified +
IntraChainCrosslinkedResidue modified +
NegativeGeneExpressionRegulation modified +
DatabaseObject modified +
StableIdentifierHistory modified +
CatalystActivityReference modified +
Polymerisation modified +
InstanceEdit modified +
ReferenceGeneProduct modified +
MarkerReference modified +
OtherEntity modified +
PathwayDiagram modified +
AbstractModifiedResidue modified +
ReactionlikeEvent modified +
TranslationalModification modified +
FragmentReplacedModification modified +
Polymer modified +
Book modified +
ProteinDrug modified +
ModifiedResidue modified +
CandidateSet modified +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent reviewed +
Pathway reviewed +
Polymer reviewed +
Depolymerisation reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
Drug reviewed +
CandidateSet reviewed +
CellDevelopmentStep reviewed +
EntitySet reviewed +
DefinedSet reviewed +
ProteinDrug reviewed +
Reaction reviewed +
GenomeEncodedEntity reviewed +
RNADrug reviewed +
Event reviewed +
CellLineagePath reviewed +
InteractionEvent reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
EntityWithAccessionedSequence reviewed +
BlackBoxEvent reviewed +
Polymerisation reviewed +
Cell reviewed +
ChemicalDrug reviewed +
Complex reviewed +
EntitySet edited +
DefinedSet edited +
ProteinDrug edited +
Reaction edited +
PhysicalEntity edited +
Drug edited +
CandidateSet edited +
CellDevelopmentStep edited +
Depolymerisation edited +
OtherEntity edited +
ReactionlikeEvent edited +
Pathway edited +
Polymer edited +
ChemicalDrug edited +
Complex edited +
Polymerisation edited +
Cell edited +
FailedReaction edited +
EntityWithAccessionedSequence edited +
BlackBoxEvent edited +
GenomeEncodedEntity edited +
Event edited +
RNADrug edited +
CellLineagePath edited +
InteractionEvent edited +
SimpleEntity edited +
Regulation created 1
ReferenceGroup created 1
Depolymerisation created 1
Disease created 1
InterChainCrosslinkedResidue created 1
DeletedControlledVocabulary created 1
ExternalOntology created 1
StableIdentifierReleaseStatus created 1
DatabaseIdentifier created 1
URL created 1
Taxon created 1
ReferenceRNASequence created 1
TranscriptionalModification created 1
Compartment created 1
CrosslinkedResidue created 1
ReplacedResidue created 1
GO_CellularComponent created 1
Figure created 1
ReferenceMolecule created 1
CellType created 1
LiteratureReference created 1
FragmentInsertionModification created 1
SimpleEntity created 1
NegativeRegulation created 1
FunctionalStatus created 1
CellLineagePath created 1
FrontPage created 1
PhysicalEntityCellType created 1
StableIdentifier created 1
Pathway created 1
_DeletedInstance created 1
GeneticallyModifiedResidue created 1
GO_MolecularFunction created 1
RegulationReference created 1
ReferenceDNASequence created 1
_Deleted created 1
DefinedSet created 1
ReferenceSequence created 1
ControlReference created 1
Person created 1
FragmentDeletionModification created 1
InteractionEvent created 1
ReferenceTherapeutic created 1
Summation created 1
ReferenceDatabase created 1
ChemicalDrug created 1
DrugActionType created 1
EvidenceType created 1
NonsenseMutation created 1
NegativePrecedingEvent created 1
OtherEntity created 1
PathwayDiagram created 1
MarkerReference created 1
TranslationalModification created 1
FragmentReplacedModification created 1
Polymer created 1
AbstractModifiedResidue created 1
ReactionlikeEvent created 1
ProteinDrug created 1
Book created 1
ModifiedResidue created 1
CandidateSet created 1
FailedReaction created 1
Anatomy created 1
_Release created 1
Affiliation created 1
Species created 1
NegativePrecedingEventReason created 1
GenomeEncodedEntity created 1
ReferenceIsoform created 1
ControlledVocabulary created 1
RNADrug created 1
IntraChainCrosslinkedResidue created 1
NegativeGeneExpressionRegulation created 1
DatabaseObject created 1
SequenceOntology created 1
PsiMod created 1
RetractionStatus created 1
FunctionalStatusType created 1
ReferenceGeneProduct created 1
StableIdentifierHistory created 1
Polymerisation created 1
CatalystActivityReference created 1
InstanceEdit created 1
ReactionType created 1
ReferenceEntity created 1
PositiveRegulation created 1
_UpdateTracker created 1
EntityFunctionalStatus created 1
CatalystActivity created 1
ReviewStatus created 1
Reaction created 1
EntitySet created 1
Drug created 1
CellDevelopmentStep created 1
GroupModifiedResidue created 1
PhysicalEntity created 1
ModifiedNucleotide created 1
EntityWithAccessionedSequence created 1
BlackBoxEvent created 1
GO_BiologicalProcess created 1
FragmentModification created 1
Publication created 1
Requirement created 1
Event created 1
PositiveGeneExpressionRegulation created 1
Complex created 1
Cell created 1
Cell authored 1
Polymerisation authored +
Complex authored 1
ChemicalDrug authored 1
CellLineagePath authored +
Event authored +
GenomeEncodedEntity authored 1
RNADrug authored 1
SimpleEntity authored 1
InteractionEvent authored +
BlackBoxEvent authored +
EntityWithAccessionedSequence authored 1
FailedReaction authored +
PhysicalEntity authored 1
CellDevelopmentStep authored +
CandidateSet authored 1
Drug authored 1
DefinedSet authored 1
EntitySet authored 1
Reaction authored +
ProteinDrug authored 1
ReactionlikeEvent authored +
Polymer authored 1
Pathway authored +
Depolymerisation authored +
OtherEntity authored 1
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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