Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
ReferenceGeneProduct created 1
ReferenceTherapeutic created 1
ChemicalDrug created 1
Book created 1
ReplacedResidue created 1
ReferenceDNASequence created 1
LiteratureReference created 1
StableIdentifier created 1
Figure created 1
EntityWithAccessionedSequence created 1
CatalystActivity created 1
Disease created 1
ControlledVocabulary created 1
Pathway created 1
Regulation created 1
StableIdentifierReleaseStatus created 1
TranscriptionalModification created 1
GO_MolecularFunction created 1
ReactionType created 1
CandidateSet created 1
SequenceOntology created 1
CellLineagePath created 1
Person created 1
ReferenceGroup created 1
NegativeRegulation created 1
FailedReaction created 1
Taxon created 1
RegulationReference created 1
Publication created 1
ReferenceDatabase created 1
ReferenceEntity created 1
GO_CellularComponent created 1
PathwayDiagram created 1
OtherEntity created 1
Requirement created 1
ReviewStatus created 1
FragmentInsertionModification created 1
ReactionlikeEvent created 1
Event created 1
Cell created 1
DeletedControlledVocabulary created 1
DatabaseIdentifier created 1
CellType created 1
GO_BiologicalProcess created 1
PositiveRegulation created 1
ProteinDrug created 1
NegativePrecedingEventReason created 1
InstanceEdit created 1
PsiMod created 1
NonsenseMutation created 1
CatalystActivityReference created 1
StableIdentifierHistory created 1
FunctionalStatus created 1
EntitySet created 1
Anatomy created 1
FrontPage created 1
IntraChainCrosslinkedResidue created 1
NegativeGeneExpressionRegulation created 1
_UpdateTracker created 1
ModifiedResidue created 1
DefinedSet created 1
Complex created 1
SimpleEntity created 1
ReferenceIsoform created 1
_Deleted created 1
Species created 1
GroupModifiedResidue created 1
_Release created 1
AbstractModifiedResidue created 1
Compartment created 1
DrugActionType created 1
_DeletedInstance created 1
Polymerisation created 1
Summation created 1
ReferenceMolecule created 1
Polymer created 1
RNADrug created 1
ReferenceSequence created 1
InterChainCrosslinkedResidue created 1
FragmentReplacedModification created 1
FragmentDeletionModification created 1
RetractionStatus created 1
FragmentModification created 1
NegativePrecedingEvent created 1
GeneticallyModifiedResidue created 1
ExternalOntology created 1
FunctionalStatusType created 1
Affiliation created 1
InteractionEvent created 1
CellDevelopmentStep created 1
TranslationalModification created 1
ReferenceRNASequence created 1
URL created 1
CrosslinkedResidue created 1
Depolymerisation created 1
MarkerReference created 1
ModifiedNucleotide created 1
PhysicalEntity created 1
ControlReference created 1
PositiveGeneExpressionRegulation created 1
Reaction created 1
Drug created 1
BlackBoxEvent created 1
PhysicalEntityCellType created 1
DatabaseObject created 1
GenomeEncodedEntity created 1
EntityFunctionalStatus created 1
EvidenceType created 1
CandidateSet edited +
CellLineagePath edited +
RNADrug edited +
FailedReaction edited +
Drug edited +
Reaction edited +
BlackBoxEvent edited +
GenomeEncodedEntity edited +
DefinedSet edited +
Complex edited +
OtherEntity edited +
InteractionEvent edited +
ChemicalDrug edited +
CellDevelopmentStep edited +
SimpleEntity edited +
Cell edited +
ReactionlikeEvent edited +
Event edited +
EntityWithAccessionedSequence edited +
Depolymerisation edited +
ProteinDrug edited +
Pathway edited +
EntitySet edited +
Polymer edited +
Polymerisation edited +
PhysicalEntity edited +
ReplacedResidue modified +
ReferenceDNASequence modified +
Book modified +
LiteratureReference modified +
StableIdentifier modified +
Figure modified +
EntityWithAccessionedSequence modified +
CatalystActivity modified +
ReferenceTherapeutic modified +
ReferenceGeneProduct modified +
ChemicalDrug modified +
GO_MolecularFunction modified +
Disease modified +
Pathway modified +
ControlledVocabulary modified +
Regulation modified +
TranscriptionalModification modified +
StableIdentifierReleaseStatus modified +
Person modified +
ReferenceGroup modified +
NegativeRegulation modified +
FailedReaction modified +
Taxon modified +
Publication modified +
RegulationReference modified +
ReactionType modified +
SequenceOntology modified +
CandidateSet modified +
CellLineagePath modified +
PathwayDiagram modified +
OtherEntity modified +
ReviewStatus modified +
Requirement modified +
ReferenceDatabase modified +
ReferenceEntity modified +
GO_CellularComponent modified +
CellType modified +
GO_BiologicalProcess modified +
PositiveRegulation modified +
FragmentInsertionModification modified +
Event modified +
Cell modified +
ReactionlikeEvent modified +
DeletedControlledVocabulary modified +
DatabaseIdentifier modified +
CatalystActivityReference modified +
StableIdentifierHistory modified +
FunctionalStatus modified +
EntitySet modified +
ProteinDrug modified +
NegativePrecedingEventReason modified +
InstanceEdit modified +
PsiMod modified +
NonsenseMutation modified +
IntraChainCrosslinkedResidue modified +
NegativeGeneExpressionRegulation modified +
Anatomy modified +
FrontPage modified +
DefinedSet modified +
Complex modified +
_UpdateTracker modified +
ModifiedResidue modified +
ReferenceIsoform modified +
_Deleted modified +
Species modified +
GroupModifiedResidue modified +
SimpleEntity modified +
_DeletedInstance modified +
Polymerisation modified +
Summation modified +
ReferenceMolecule modified +
Polymer modified +
AbstractModifiedResidue modified +
_Release modified +
Compartment modified +
DrugActionType modified +
InterChainCrosslinkedResidue modified +
FragmentReplacedModification modified +
RNADrug modified +
ReferenceSequence modified +
GeneticallyModifiedResidue modified +
FragmentDeletionModification modified +
RetractionStatus modified +
FragmentModification modified +
NegativePrecedingEvent modified +
ReferenceRNASequence modified +
URL modified +
CrosslinkedResidue modified +
Depolymerisation modified +
ExternalOntology modified +
FunctionalStatusType modified +
InteractionEvent modified +
Affiliation modified +
CellDevelopmentStep modified +
TranslationalModification modified +
ModifiedNucleotide modified +
PhysicalEntity modified +
MarkerReference modified +
PositiveGeneExpressionRegulation modified +
ControlReference modified +
PhysicalEntityCellType modified +
DatabaseObject modified +
GenomeEncodedEntity modified +
EntityFunctionalStatus modified +
EvidenceType modified +
Drug modified +
Reaction modified +
BlackBoxEvent modified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
Pathway structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
OtherEntity revised +
Complex revised +
DefinedSet revised +
GenomeEncodedEntity revised +
BlackBoxEvent revised +
Reaction revised +
Drug revised +
FailedReaction revised +
RNADrug revised +
CellLineagePath revised +
CandidateSet revised +
PhysicalEntity revised +
Polymerisation revised +
Polymer revised +
EntitySet revised +
Pathway revised +
ProteinDrug revised +
Depolymerisation revised +
EntityWithAccessionedSequence revised +
SimpleEntity revised +
Event revised +
ReactionlikeEvent revised +
Cell revised +
CellDevelopmentStep revised +
InteractionEvent revised +
ChemicalDrug revised +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
EntityWithAccessionedSequence authored 1
Depolymerisation authored +
InteractionEvent authored +
ChemicalDrug authored 1
CellDevelopmentStep authored +
ReactionlikeEvent authored +
SimpleEntity authored 1
Event authored +
Cell authored 1
EntitySet authored 1
Polymer authored 1
PhysicalEntity authored 1
Polymerisation authored +
ProteinDrug authored 1
Pathway authored +
FailedReaction authored +
CandidateSet authored 1
CellLineagePath authored +
RNADrug authored 1
GenomeEncodedEntity authored 1
DefinedSet authored 1
Complex authored 1
OtherEntity authored 1
Drug authored 1
Reaction authored +
BlackBoxEvent authored +
EntitySet reviewed +
Polymer reviewed +
Polymerisation reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
ProteinDrug reviewed +
Depolymerisation reviewed +
EntityWithAccessionedSequence reviewed +
CellDevelopmentStep reviewed +
InteractionEvent reviewed +
ChemicalDrug reviewed +
Cell reviewed +
SimpleEntity reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
Complex reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
OtherEntity reviewed +
BlackBoxEvent reviewed +
Drug reviewed +
Reaction reviewed +
FailedReaction reviewed +
CellLineagePath reviewed +
CandidateSet reviewed +
RNADrug reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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