Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReviewStatus modified +
Species modified +
FragmentModification modified +
DeletedControlledVocabulary modified +
EvidenceType modified +
CellType modified +
StableIdentifier modified +
CatalystActivity modified +
PositiveGeneExpressionRegulation modified +
Affiliation modified +
FailedReaction modified +
ReferenceDatabase modified +
ExternalOntology modified +
RetractionStatus modified +
EntityFunctionalStatus modified +
StableIdentifierHistory modified +
ReferenceDNASequence modified +
Taxon modified +
CatalystActivityReference modified +
ProteinDrug modified +
Regulation modified +
Publication modified +
Polymer modified +
Figure modified +
MarkerReference modified +
InteractionEvent modified +
ReferenceSequence modified +
Depolymerisation modified +
FragmentDeletionModification modified +
ReferenceGroup modified +
NegativeGeneExpressionRegulation modified +
EntitySet modified +
ReferenceRNASequence modified +
FrontPage modified +
FunctionalStatus modified +
DatabaseIdentifier modified +
ControlReference modified +
ChemicalDrug modified +
Cell modified +
ReferenceGeneProduct modified +
DefinedSet modified +
SimpleEntity modified +
StableIdentifierReleaseStatus modified +
NegativeRegulation modified +
GO_MolecularFunction modified +
GenomeEncodedEntity modified +
SequenceOntology modified +
PsiMod modified +
GO_BiologicalProcess modified +
Polymerisation modified +
BlackBoxEvent modified +
ReferenceEntity modified +
ReferenceIsoform modified +
Requirement modified +
_Deleted modified +
IntraChainCrosslinkedResidue modified +
_Release modified +
CellDevelopmentStep modified +
Complex modified +
NegativePrecedingEventReason modified +
ReactionlikeEvent modified +
_DeletedInstance modified +
ModifiedResidue modified +
DrugActionType modified +
Reaction modified +
InterChainCrosslinkedResidue modified +
PhysicalEntityCellType modified +
CellLineagePath modified +
TranscriptionalModification modified +
Compartment modified +
GeneticallyModifiedResidue modified +
Summation modified +
GO_CellularComponent modified +
InstanceEdit modified +
FragmentReplacedModification modified +
CandidateSet modified +
PathwayDiagram modified +
ReactionType modified +
Person modified +
Pathway modified +
FragmentInsertionModification modified +
LiteratureReference modified +
ControlledVocabulary modified +
ReplacedResidue modified +
RegulationReference modified +
_UpdateTracker modified +
ReferenceTherapeutic modified +
GroupModifiedResidue modified +
Drug modified +
TranslationalModification modified +
PositiveRegulation modified +
AbstractModifiedResidue modified +
Book modified +
OtherEntity modified +
NegativePrecedingEvent modified +
Disease modified +
FunctionalStatusType modified +
URL modified +
RNADrug modified +
Anatomy modified +
ReferenceMolecule modified +
NonsenseMutation modified +
PhysicalEntity modified +
ModifiedNucleotide modified +
EntityWithAccessionedSequence modified +
DatabaseObject modified +
CrosslinkedResidue modified +
Event modified +
FailedReaction edited +
EntitySet edited +
Complex edited +
CellDevelopmentStep edited +
OtherEntity edited +
Pathway edited +
Drug edited +
Polymerisation edited +
BlackBoxEvent edited +
Depolymerisation edited +
InteractionEvent edited +
Polymer edited +
EntityWithAccessionedSequence edited +
Event edited +
GenomeEncodedEntity edited +
CandidateSet edited +
Cell edited +
DefinedSet edited +
Reaction edited +
ReactionlikeEvent edited +
ChemicalDrug edited +
RNADrug edited +
PhysicalEntity edited +
CellLineagePath edited +
SimpleEntity edited +
ProteinDrug edited +
EntitySet revised +
FailedReaction revised +
OtherEntity revised +
CellDevelopmentStep revised +
Complex revised +
Pathway revised +
Polymerisation revised +
BlackBoxEvent revised +
Drug revised +
Polymer revised +
EntityWithAccessionedSequence revised +
InteractionEvent revised +
Depolymerisation revised +
GenomeEncodedEntity revised +
CandidateSet revised +
Event revised +
RNADrug revised +
ReactionlikeEvent revised +
ChemicalDrug revised +
Reaction revised +
DefinedSet revised +
Cell revised +
SimpleEntity revised +
CellLineagePath revised +
ProteinDrug revised +
PhysicalEntity revised +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent structureModified +
Pathway structureModified +
Reaction structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
CellDevelopmentStep authored +
Complex authored 1
OtherEntity authored 1
EntitySet authored 1
FailedReaction authored +
Polymerisation authored +
BlackBoxEvent authored +
Drug authored 1
Pathway authored +
CandidateSet authored 1
GenomeEncodedEntity authored 1
Event authored +
EntityWithAccessionedSequence authored 1
Polymer authored 1
InteractionEvent authored +
Depolymerisation authored +
SimpleEntity authored 1
CellLineagePath authored +
ProteinDrug authored 1
PhysicalEntity authored 1
ReactionlikeEvent authored +
RNADrug authored 1
ChemicalDrug authored 1
Reaction authored +
DefinedSet authored 1
Cell authored 1
StableIdentifier created 1
CellType created 1
EvidenceType created 1
Species created 1
FragmentModification created 1
DeletedControlledVocabulary created 1
ReviewStatus created 1
CatalystActivity created 1
PositiveGeneExpressionRegulation created 1
Affiliation created 1
FailedReaction created 1
EntityFunctionalStatus created 1
RetractionStatus created 1
ExternalOntology created 1
ReferenceDatabase created 1
ReferenceDNASequence created 1
StableIdentifierHistory created 1
Regulation created 1
Publication created 1
Taxon created 1
ProteinDrug created 1
CatalystActivityReference created 1
Depolymerisation created 1
InteractionEvent created 1
MarkerReference created 1
ReferenceSequence created 1
Figure created 1
Polymer created 1
FragmentDeletionModification created 1
NegativeGeneExpressionRegulation created 1
ReferenceGroup created 1
ReferenceRNASequence created 1
EntitySet created 1
ControlReference created 1
FunctionalStatus created 1
DatabaseIdentifier created 1
FrontPage created 1
Cell created 1
ReferenceGeneProduct created 1
DefinedSet created 1
ChemicalDrug created 1
StableIdentifierReleaseStatus created 1
SimpleEntity created 1
GO_MolecularFunction created 1
NegativeRegulation created 1
GenomeEncodedEntity created 1
GO_BiologicalProcess created 1
PsiMod created 1
SequenceOntology created 1
ReferenceIsoform created 1
ReferenceEntity created 1
Polymerisation created 1
BlackBoxEvent created 1
_Deleted created 1
Requirement created 1
Complex created 1
CellDevelopmentStep created 1
_Release created 1
IntraChainCrosslinkedResidue created 1
InterChainCrosslinkedResidue created 1
Reaction created 1
_DeletedInstance created 1
DrugActionType created 1
ModifiedResidue created 1
NegativePrecedingEventReason created 1
ReactionlikeEvent created 1
GO_CellularComponent created 1
Summation created 1
GeneticallyModifiedResidue created 1
PhysicalEntityCellType created 1
CellLineagePath created 1
Compartment created 1
TranscriptionalModification created 1
FragmentReplacedModification created 1
InstanceEdit created 1
ReactionType created 1
CandidateSet created 1
PathwayDiagram created 1
RegulationReference created 1
ReplacedResidue created 1
LiteratureReference created 1
FragmentInsertionModification created 1
ControlledVocabulary created 1
Person created 1
Pathway created 1
Drug created 1
GroupModifiedResidue created 1
ReferenceTherapeutic created 1
_UpdateTracker created 1
PositiveRegulation created 1
TranslationalModification created 1
URL created 1
Disease created 1
FunctionalStatusType created 1
OtherEntity created 1
NegativePrecedingEvent created 1
AbstractModifiedResidue created 1
Book created 1
NonsenseMutation created 1
Anatomy created 1
ReferenceMolecule created 1
RNADrug created 1
ModifiedNucleotide created 1
PhysicalEntity created 1
CrosslinkedResidue created 1
DatabaseObject created 1
EntityWithAccessionedSequence created 1
Event created 1
EntityWithAccessionedSequence reviewed +
Polymer reviewed +
Depolymerisation reviewed +
InteractionEvent reviewed +
Event reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
RNADrug reviewed +
Cell reviewed +
DefinedSet reviewed +
Reaction reviewed +
PhysicalEntity reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
EntitySet reviewed +
FailedReaction reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
OtherEntity reviewed +
Pathway reviewed +
Drug reviewed +
Polymerisation reviewed +
BlackBoxEvent reviewed +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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