Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
EntitySet revised +
FailedReaction revised +
PhysicalEntity revised +
ChemicalDrug revised +
CellDevelopmentStep revised +
Reaction revised +
Event revised +
RNADrug revised +
InteractionEvent revised +
CandidateSet revised +
Pathway revised +
OtherEntity revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
Depolymerisation revised +
Polymerisation revised +
Drug revised +
ReactionlikeEvent revised +
Cell revised +
SimpleEntity revised +
Polymer revised +
DefinedSet revised +
GenomeEncodedEntity revised +
BlackBoxEvent revised +
CellLineagePath revised +
Complex revised +
FrontPage created 1
RetractionStatus created 1
OtherEntity created 1
FunctionalStatus created 1
_UpdateTracker created 1
Figure created 1
RNADrug created 1
AbstractModifiedResidue created 1
ReferenceTherapeutic created 1
Reaction created 1
GroupModifiedResidue created 1
Event created 1
FragmentDeletionModification created 1
ReferenceEntity created 1
EntitySet created 1
Compartment created 1
ChemicalDrug created 1
PhysicalEntity created 1
FailedReaction created 1
StableIdentifier created 1
ModifiedNucleotide created 1
CellDevelopmentStep created 1
Complex created 1
Requirement created 1
_Release created 1
_Deleted created 1
GenomeEncodedEntity created 1
Cell created 1
Summation created 1
DatabaseObject created 1
ReferenceGeneProduct created 1
CatalystActivityReference created 1
Polymer created 1
GO_BiologicalProcess created 1
ControlledVocabulary created 1
ExternalOntology created 1
InstanceEdit created 1
Taxon created 1
DatabaseIdentifier created 1
CatalystActivity created 1
PsiMod created 1
GO_CellularComponent created 1
Book created 1
CellType created 1
PathwayDiagram created 1
Anatomy created 1
PositiveGeneExpressionRegulation created 1
ReferenceSequence created 1
_DeletedInstance created 1
URL created 1
ModifiedResidue created 1
StableIdentifierHistory created 1
RegulationReference created 1
ReferenceMolecule created 1
BlackBoxEvent created 1
CellLineagePath created 1
GO_MolecularFunction created 1
InterChainCrosslinkedResidue created 1
TranscriptionalModification created 1
CrosslinkedResidue created 1
Affiliation created 1
EntityWithAccessionedSequence created 1
Person created 1
FunctionalStatusType created 1
FragmentModification created 1
ReferenceRNASequence created 1
ReferenceDatabase created 1
MarkerReference created 1
ReactionlikeEvent created 1
Regulation created 1
NegativePrecedingEventReason created 1
Publication created 1
EntityFunctionalStatus created 1
FragmentReplacedModification created 1
NonsenseMutation created 1
Species created 1
ReferenceDNASequence created 1
DeletedControlledVocabulary created 1
ReferenceIsoform created 1
PhysicalEntityCellType created 1
ReplacedResidue created 1
FragmentInsertionModification created 1
EvidenceType created 1
ReviewStatus created 1
NegativeRegulation created 1
TranslationalModification created 1
IntraChainCrosslinkedResidue created 1
NegativeGeneExpressionRegulation created 1
SequenceOntology created 1
StableIdentifierReleaseStatus created 1
ControlReference created 1
GeneticallyModifiedResidue created 1
NegativePrecedingEvent created 1
ProteinDrug created 1
PositiveRegulation created 1
InteractionEvent created 1
CandidateSet created 1
Pathway created 1
Disease created 1
LiteratureReference created 1
DrugActionType created 1
DefinedSet created 1
ReactionType created 1
SimpleEntity created 1
Depolymerisation created 1
ReferenceGroup created 1
Polymerisation created 1
Drug created 1
InteractionEvent internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
DefinedSet modified +
ReactionType modified +
DrugActionType modified +
Drug modified +
Polymerisation modified +
ReferenceGroup modified +
Depolymerisation modified +
SimpleEntity modified +
Pathway modified +
CandidateSet modified +
InteractionEvent modified +
PositiveRegulation modified +
ProteinDrug modified +
LiteratureReference modified +
Disease modified +
IntraChainCrosslinkedResidue modified +
TranslationalModification modified +
NegativeRegulation modified +
ReviewStatus modified +
FragmentInsertionModification modified +
EvidenceType modified +
NegativePrecedingEvent modified +
GeneticallyModifiedResidue modified +
ControlReference modified +
StableIdentifierReleaseStatus modified +
SequenceOntology modified +
NegativeGeneExpressionRegulation modified +
NonsenseMutation modified +
FragmentReplacedModification modified +
EntityFunctionalStatus modified +
Publication modified +
Regulation modified +
NegativePrecedingEventReason modified +
ReplacedResidue modified +
PhysicalEntityCellType modified +
ReferenceIsoform modified +
ReferenceDNASequence modified +
DeletedControlledVocabulary modified +
Species modified +
InterChainCrosslinkedResidue modified +
GO_MolecularFunction modified +
CellLineagePath modified +
BlackBoxEvent modified +
ReferenceMolecule modified +
RegulationReference modified +
StableIdentifierHistory modified +
ReactionlikeEvent modified +
MarkerReference modified +
ReferenceDatabase modified +
ReferenceRNASequence modified +
FunctionalStatusType modified +
EntityWithAccessionedSequence modified +
Person modified +
FragmentModification modified +
CrosslinkedResidue modified +
Affiliation modified +
TranscriptionalModification modified +
CellType modified +
GO_CellularComponent modified +
Book modified +
PsiMod modified +
CatalystActivity modified +
URL modified +
_DeletedInstance modified +
ModifiedResidue modified +
ReferenceSequence modified +
PositiveGeneExpressionRegulation modified +
Anatomy modified +
PathwayDiagram modified +
GenomeEncodedEntity modified +
_Deleted modified +
_Release modified +
Requirement modified +
Complex modified +
DatabaseIdentifier modified +
Taxon modified +
ExternalOntology modified +
InstanceEdit modified +
GO_BiologicalProcess modified +
ControlledVocabulary modified +
Polymer modified +
CatalystActivityReference modified +
ReferenceGeneProduct modified +
DatabaseObject modified +
Summation modified +
Cell modified +
AbstractModifiedResidue modified +
RNADrug modified +
Figure modified +
_UpdateTracker modified +
RetractionStatus modified +
FrontPage modified +
FunctionalStatus modified +
OtherEntity modified +
StableIdentifier modified +
CellDevelopmentStep modified +
ModifiedNucleotide modified +
PhysicalEntity modified +
ChemicalDrug modified +
FailedReaction modified +
ReferenceEntity modified +
EntitySet modified +
Compartment modified +
ReferenceTherapeutic modified +
Reaction modified +
FragmentDeletionModification modified +
GroupModifiedResidue modified +
Event modified +
Reaction structureModified +
Event structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
Pathway structureModified +
CellDevelopmentStep reviewed +
EntitySet reviewed +
ChemicalDrug reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
Event reviewed +
Reaction reviewed +
InteractionEvent reviewed +
CandidateSet reviewed +
Pathway reviewed +
RNADrug reviewed +
OtherEntity reviewed +
ProteinDrug reviewed +
Polymerisation reviewed +
ReactionlikeEvent reviewed +
Drug reviewed +
Depolymerisation reviewed +
EntityWithAccessionedSequence reviewed +
SimpleEntity reviewed +
Polymer reviewed +
Cell reviewed +
DefinedSet reviewed +
CellLineagePath reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
Complex reviewed +
EntityWithAccessionedSequence authored 1
Depolymerisation authored +
ReactionlikeEvent authored +
Drug authored 1
Polymerisation authored +
Cell authored 1
Polymer authored 1
SimpleEntity authored 1
GenomeEncodedEntity authored 1
BlackBoxEvent authored +
CellLineagePath authored +
DefinedSet authored 1
Complex authored 1
ChemicalDrug authored 1
PhysicalEntity authored 1
FailedReaction authored +
EntitySet authored 1
CellDevelopmentStep authored +
Event authored +
Reaction authored +
RNADrug authored 1
CandidateSet authored 1
Pathway authored +
InteractionEvent authored +
OtherEntity authored 1
ProteinDrug authored 1
ProteinDrug edited +
OtherEntity edited +
RNADrug edited +
InteractionEvent edited +
CandidateSet edited +
Pathway edited +
Reaction edited +
Event edited +
EntitySet edited +
PhysicalEntity edited +
ChemicalDrug edited +
FailedReaction edited +
CellDevelopmentStep edited +
Complex edited +
DefinedSet edited +
GenomeEncodedEntity edited +
BlackBoxEvent edited +
CellLineagePath edited +
Cell edited +
SimpleEntity edited +
Polymer edited +
Depolymerisation edited +
EntityWithAccessionedSequence edited +
Polymerisation edited +
ReactionlikeEvent edited +
Drug edited +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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