Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
BlackBoxEvent edited +
Cell edited +
Drug edited +
Pathway edited +
EntityWithAccessionedSequence edited +
FailedReaction edited +
SimpleEntity edited +
DefinedSet edited +
Depolymerisation edited +
OtherEntity edited +
InteractionEvent edited +
Polymerisation edited +
CandidateSet edited +
EntitySet edited +
Event edited +
Complex edited +
ChemicalDrug edited +
PhysicalEntity edited +
Polymer edited +
CellDevelopmentStep edited +
ReactionlikeEvent edited +
GenomeEncodedEntity edited +
Reaction edited +
CellLineagePath edited +
ProteinDrug edited +
RNADrug edited +
DefinedSet reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
OtherEntity reviewed +
Depolymerisation reviewed +
Cell reviewed +
BlackBoxEvent reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
Drug reviewed +
ProteinDrug reviewed +
Reaction reviewed +
CellLineagePath reviewed +
RNADrug reviewed +
Event reviewed +
EntitySet reviewed +
CandidateSet reviewed +
InteractionEvent reviewed +
Polymerisation reviewed +
GenomeEncodedEntity reviewed +
CellDevelopmentStep reviewed +
ReactionlikeEvent reviewed +
ChemicalDrug reviewed +
Polymer reviewed +
PhysicalEntity reviewed +
Complex reviewed +
ProteinDrug authored 1
CellLineagePath authored +
Reaction authored +
RNADrug authored 1
EntitySet authored 1
Event authored +
CandidateSet authored 1
Polymerisation authored +
InteractionEvent authored +
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
CellDevelopmentStep authored +
PhysicalEntity authored 1
ChemicalDrug authored 1
Polymer authored 1
Complex authored 1
DefinedSet authored 1
SimpleEntity authored 1
FailedReaction authored +
OtherEntity authored 1
Depolymerisation authored +
Cell authored 1
BlackBoxEvent authored +
EntityWithAccessionedSequence authored 1
Drug authored 1
Pathway authored +
ModifiedResidue modified +
SimpleEntity modified +
ModifiedNucleotide modified +
DatabaseIdentifier modified +
StableIdentifierReleaseStatus modified +
URL modified +
ReferenceDNASequence modified +
GO_MolecularFunction modified +
FragmentModification modified +
FunctionalStatus modified +
CellLineagePath modified +
GeneticallyModifiedResidue modified +
Requirement modified +
Event modified +
EntitySet modified +
FrontPage modified +
GenomeEncodedEntity modified +
RetractionStatus modified +
ReferenceSequence modified +
FailedReaction modified +
PathwayDiagram modified +
FragmentReplacedModification modified +
NegativeRegulation modified +
Disease modified +
ReferenceDatabase modified +
RegulationReference modified +
_Deleted modified +
OtherEntity modified +
Summation modified +
PsiMod modified +
Cell modified +
LiteratureReference modified +
Pathway modified +
_Release modified +
ReactionType modified +
Species modified +
Book modified +
ReferenceGeneProduct modified +
MarkerReference modified +
ReferenceIsoform modified +
StableIdentifierHistory modified +
Taxon modified +
ReferenceGroup modified +
CandidateSet modified +
ControlledVocabulary modified +
IntraChainCrosslinkedResidue modified +
ControlReference modified +
ReferenceMolecule modified +
ChemicalDrug modified +
EvidenceType modified +
_UpdateTracker modified +
SequenceOntology modified +
Person modified +
DatabaseObject modified +
Depolymerisation modified +
ReviewStatus modified +
ExternalOntology modified +
EntityFunctionalStatus modified +
BlackBoxEvent modified +
PositiveGeneExpressionRegulation modified +
Affiliation modified +
CatalystActivityReference modified +
FunctionalStatusType modified +
NonsenseMutation modified +
EntityWithAccessionedSequence modified +
InterChainCrosslinkedResidue modified +
ReferenceRNASequence modified +
DeletedControlledVocabulary modified +
NegativeGeneExpressionRegulation modified +
NegativePrecedingEvent modified +
Reaction modified +
RNADrug modified +
Anatomy modified +
ReferenceTherapeutic modified +
Figure modified +
PositiveRegulation modified +
Polymerisation modified +
Polymer modified +
PhysicalEntity modified +
CatalystActivity modified +
InstanceEdit modified +
CellDevelopmentStep modified +
FragmentInsertionModification modified +
StableIdentifier modified +
AbstractModifiedResidue modified +
GO_CellularComponent modified +
DefinedSet modified +
ReplacedResidue modified +
DrugActionType modified +
Compartment modified +
_DeletedInstance modified +
Drug modified +
GroupModifiedResidue modified +
ProteinDrug modified +
CellType modified +
Regulation modified +
TranslationalModification modified +
GO_BiologicalProcess modified +
TranscriptionalModification modified +
InteractionEvent modified +
NegativePrecedingEventReason modified +
FragmentDeletionModification modified +
ReferenceEntity modified +
Complex modified +
ReactionlikeEvent modified +
Publication modified +
CrosslinkedResidue modified +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
StableIdentifier created 1
FragmentInsertionModification created 1
GO_CellularComponent created 1
AbstractModifiedResidue created 1
DefinedSet created 1
ReplacedResidue created 1
DrugActionType created 1
Compartment created 1
_DeletedInstance created 1
Drug created 1
GroupModifiedResidue created 1
ProteinDrug created 1
CellType created 1
Regulation created 1
TranslationalModification created 1
TranscriptionalModification created 1
GO_BiologicalProcess created 1
InteractionEvent created 1
FragmentDeletionModification created 1
NegativePrecedingEventReason created 1
ReferenceEntity created 1
Complex created 1
ReactionlikeEvent created 1
Publication created 1
CrosslinkedResidue created 1
SequenceOntology created 1
Person created 1
DatabaseObject created 1
Depolymerisation created 1
ExternalOntology created 1
ReviewStatus created 1
EntityFunctionalStatus created 1
BlackBoxEvent created 1
PositiveGeneExpressionRegulation created 1
Affiliation created 1
CatalystActivityReference created 1
NonsenseMutation created 1
EntityWithAccessionedSequence created 1
FunctionalStatusType created 1
InterChainCrosslinkedResidue created 1
ReferenceRNASequence created 1
DeletedControlledVocabulary created 1
NegativeGeneExpressionRegulation created 1
NegativePrecedingEvent created 1
Reaction created 1
RNADrug created 1
Anatomy created 1
ReferenceTherapeutic created 1
Figure created 1
Polymerisation created 1
PositiveRegulation created 1
Polymer created 1
PhysicalEntity created 1
CatalystActivity created 1
InstanceEdit created 1
CellDevelopmentStep created 1
ReferenceSequence created 1
PathwayDiagram created 1
FailedReaction created 1
NegativeRegulation created 1
FragmentReplacedModification created 1
Disease created 1
RegulationReference created 1
_Deleted created 1
ReferenceDatabase created 1
OtherEntity created 1
Summation created 1
PsiMod created 1
Cell created 1
LiteratureReference created 1
Pathway created 1
_Release created 1
ReactionType created 1
Species created 1
Book created 1
ReferenceGeneProduct created 1
StableIdentifierHistory created 1
MarkerReference created 1
ReferenceIsoform created 1
Taxon created 1
ReferenceGroup created 1
CandidateSet created 1
ControlledVocabulary created 1
IntraChainCrosslinkedResidue created 1
ControlReference created 1
ChemicalDrug created 1
ReferenceMolecule created 1
EvidenceType created 1
_UpdateTracker created 1
SimpleEntity created 1
ModifiedResidue created 1
ModifiedNucleotide created 1
DatabaseIdentifier created 1
URL created 1
StableIdentifierReleaseStatus created 1
ReferenceDNASequence created 1
FragmentModification created 1
GO_MolecularFunction created 1
FunctionalStatus created 1
CellLineagePath created 1
GeneticallyModifiedResidue created 1
Requirement created 1
EntitySet created 1
Event created 1
FrontPage created 1
GenomeEncodedEntity created 1
RetractionStatus created 1
_Deleted replacementInstances +
Drug revised +
Pathway revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
Cell revised +
Depolymerisation revised +
OtherEntity revised +
FailedReaction revised +
SimpleEntity revised +
DefinedSet revised +
Complex revised +
Polymer revised +
ChemicalDrug revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
Polymerisation revised +
CandidateSet revised +
EntitySet revised +
Event revised +
RNADrug revised +
Reaction revised +
CellLineagePath revised +
ProteinDrug revised +
Depolymerisation structureModified +
Reaction structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
Pathway structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Event structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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