Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
FailedReaction authored +
ChemicalDrug authored 1
Cell authored 1
PhysicalEntity authored 1
GenomeEncodedEntity authored 1
Complex authored 1
Reaction authored +
EntitySet authored 1
Polymerisation authored +
CandidateSet authored 1
DefinedSet authored 1
Event authored +
OtherEntity authored 1
RNADrug authored 1
ProteinDrug authored 1
Polymer authored 1
CellLineagePath authored +
BlackBoxEvent authored +
ReactionlikeEvent authored +
Depolymerisation authored +
SimpleEntity authored 1
CellDevelopmentStep authored +
EntityWithAccessionedSequence authored 1
InteractionEvent authored +
Drug authored 1
Pathway authored +
ProteinDrug reviewed +
Polymer reviewed +
CellLineagePath reviewed +
RNADrug reviewed +
OtherEntity reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
Cell reviewed +
PhysicalEntity reviewed +
ChemicalDrug reviewed +
FailedReaction reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
EntitySet reviewed +
DefinedSet reviewed +
Complex reviewed +
Reaction reviewed +
InteractionEvent reviewed +
Drug reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
SimpleEntity reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
CrosslinkedResidue modified +
SequenceOntology modified +
StableIdentifierReleaseStatus modified +
IntraChainCrosslinkedResidue modified +
InteractionEvent modified +
FragmentInsertionModification modified +
CellDevelopmentStep modified +
SimpleEntity modified +
Depolymerisation modified +
ReferenceTherapeutic modified +
EvidenceType modified +
ReferenceGroup modified +
NegativePrecedingEventReason modified +
TranslationalModification modified +
_UpdateTracker modified +
_Deleted modified +
CatalystActivity modified +
Book modified +
Regulation modified +
PhysicalEntityCellType modified +
Taxon modified +
Requirement modified +
Pathway modified +
CellType modified +
EntityFunctionalStatus modified +
PositiveRegulation modified +
ReferenceDatabase modified +
Disease modified +
FragmentModification modified +
ReferenceSequence modified +
DatabaseIdentifier modified +
ReactionlikeEvent modified +
BlackBoxEvent modified +
ReferenceRNASequence modified +
LiteratureReference modified +
Polymer modified +
Anatomy modified +
PositiveGeneExpressionRegulation modified +
OtherEntity modified +
ControlledVocabulary modified +
Person modified +
ReferenceGeneProduct modified +
DeletedControlledVocabulary modified +
GroupModifiedResidue modified +
Compartment modified +
Complex modified +
ModifiedNucleotide modified +
PathwayDiagram modified +
GenomeEncodedEntity modified +
PhysicalEntity modified +
GO_MolecularFunction modified +
Cell modified +
TranscriptionalModification modified +
AbstractModifiedResidue modified +
CatalystActivityReference modified +
InstanceEdit modified +
EntityWithAccessionedSequence modified +
Publication modified +
FrontPage modified +
Affiliation modified +
URL modified +
DrugActionType modified +
ReferenceMolecule modified +
ModifiedResidue modified +
ProteinDrug modified +
GeneticallyModifiedResidue modified +
CellLineagePath modified +
ReactionType modified +
ReviewStatus modified +
Event modified +
ReferenceDNASequence modified +
ControlReference modified +
StableIdentifier modified +
GO_BiologicalProcess modified +
FunctionalStatus modified +
GO_CellularComponent modified +
EntitySet modified +
PsiMod modified +
NegativePrecedingEvent modified +
ExternalOntology modified +
Reaction modified +
Summation modified +
FragmentReplacedModification modified +
FailedReaction modified +
ChemicalDrug modified +
NonsenseMutation modified +
Drug modified +
RegulationReference modified +
FragmentDeletionModification modified +
ReferenceEntity modified +
FunctionalStatusType modified +
Figure modified +
RNADrug modified +
DatabaseObject modified +
StableIdentifierHistory modified +
ReplacedResidue modified +
MarkerReference modified +
_Release modified +
CandidateSet modified +
DefinedSet modified +
Species modified +
Polymerisation modified +
NegativeRegulation modified +
InterChainCrosslinkedResidue modified +
ReferenceIsoform modified +
RetractionStatus modified +
NegativeGeneExpressionRegulation modified +
_DeletedInstance modified +
OtherEntity revised +
Event revised +
RNADrug revised +
Polymer revised +
ProteinDrug revised +
CellLineagePath revised +
Reaction revised +
Complex revised +
CandidateSet revised +
Polymerisation revised +
DefinedSet revised +
EntitySet revised +
ChemicalDrug revised +
FailedReaction revised +
PhysicalEntity revised +
Cell revised +
GenomeEncodedEntity revised +
Pathway revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
Drug revised +
CellDevelopmentStep revised +
BlackBoxEvent revised +
Depolymerisation revised +
ReactionlikeEvent revised +
SimpleEntity revised +
CellLineagePath internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
Event structureModified +
Pathway structureModified +
CellLineagePath structureModified +
_Deleted replacementInstances +
ReviewStatus created 1
Event created 1
ReferenceDNASequence created 1
ProteinDrug created 1
CellLineagePath created 1
GeneticallyModifiedResidue created 1
ReactionType created 1
FunctionalStatus created 1
GO_CellularComponent created 1
ControlReference created 1
StableIdentifier created 1
GO_BiologicalProcess created 1
NegativePrecedingEvent created 1
ExternalOntology created 1
Summation created 1
Reaction created 1
PsiMod created 1
EntitySet created 1
ChemicalDrug created 1
FailedReaction created 1
FragmentReplacedModification created 1
CatalystActivityReference created 1
EntityWithAccessionedSequence created 1
Publication created 1
InstanceEdit created 1
ReferenceMolecule created 1
DrugActionType created 1
Affiliation created 1
FrontPage created 1
URL created 1
ModifiedResidue created 1
ReplacedResidue created 1
StableIdentifierHistory created 1
RNADrug created 1
DatabaseObject created 1
_Release created 1
MarkerReference created 1
InterChainCrosslinkedResidue created 1
ReferenceIsoform created 1
Species created 1
CandidateSet created 1
Polymerisation created 1
DefinedSet created 1
NegativeRegulation created 1
_DeletedInstance created 1
NegativeGeneExpressionRegulation created 1
RetractionStatus created 1
NonsenseMutation created 1
Drug created 1
RegulationReference created 1
FragmentDeletionModification created 1
FunctionalStatusType created 1
Figure created 1
ReferenceEntity created 1
EvidenceType created 1
NegativePrecedingEventReason created 1
ReferenceGroup created 1
_Deleted created 1
_UpdateTracker created 1
TranslationalModification created 1
Taxon created 1
Book created 1
CatalystActivity created 1
PhysicalEntityCellType created 1
Regulation created 1
SequenceOntology created 1
StableIdentifierReleaseStatus created 1
CrosslinkedResidue created 1
InteractionEvent created 1
IntraChainCrosslinkedResidue created 1
CellDevelopmentStep created 1
FragmentInsertionModification created 1
Depolymerisation created 1
ReferenceTherapeutic created 1
SimpleEntity created 1
OtherEntity created 1
PositiveGeneExpressionRegulation created 1
ControlledVocabulary created 1
LiteratureReference created 1
Polymer created 1
Anatomy created 1
ReferenceGeneProduct created 1
DeletedControlledVocabulary created 1
GroupModifiedResidue created 1
Person created 1
Compartment created 1
Complex created 1
TranscriptionalModification created 1
AbstractModifiedResidue created 1
ModifiedNucleotide created 1
GenomeEncodedEntity created 1
PathwayDiagram created 1
Cell created 1
GO_MolecularFunction created 1
PhysicalEntity created 1
EntityFunctionalStatus created 1
Requirement created 1
Pathway created 1
CellType created 1
Disease created 1
ReferenceDatabase created 1
PositiveRegulation created 1
FragmentModification created 1
ReferenceSequence created 1
BlackBoxEvent created 1
ReferenceRNASequence created 1
ReactionlikeEvent created 1
DatabaseIdentifier created 1
CandidateSet edited +
Polymerisation edited +
EntitySet edited +
DefinedSet edited +
Complex edited +
Reaction edited +
Cell edited +
PhysicalEntity edited +
GenomeEncodedEntity edited +
ChemicalDrug edited +
FailedReaction edited +
RNADrug edited +
ProteinDrug edited +
Polymer edited +
CellLineagePath edited +
OtherEntity edited +
Event edited +
CellDevelopmentStep edited +
SimpleEntity edited +
Depolymerisation edited +
BlackBoxEvent edited +
ReactionlikeEvent edited +
Pathway edited +
EntityWithAccessionedSequence edited +
InteractionEvent edited +
Drug edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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