Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
BlackBoxEvent edited +
Event edited +
EntitySet edited +
GenomeEncodedEntity edited +
EntityWithAccessionedSequence edited +
ProteinDrug edited +
Cell edited +
Reaction edited +
DefinedSet edited +
CellLineagePath edited +
Drug edited +
CellDevelopmentStep edited +
Polymer edited +
FailedReaction edited +
ReactionlikeEvent edited +
Depolymerisation edited +
Complex edited +
InteractionEvent edited +
Pathway edited +
ChemicalDrug edited +
SimpleEntity edited +
CandidateSet edited +
OtherEntity edited +
RNADrug edited +
PhysicalEntity edited +
Polymerisation edited +
Person modified +
Depolymerisation modified +
Figure modified +
Complex modified +
FragmentReplacedModification modified +
ReferenceGroup modified +
ReferenceDNASequence modified +
_UpdateTracker modified +
ModifiedResidue modified +
RNADrug modified +
InterChainCrosslinkedResidue modified +
ReferenceSequence modified +
PositiveGeneExpressionRegulation modified +
EntitySet modified +
Disease modified +
ReferenceGeneProduct modified +
GenomeEncodedEntity modified +
ControlReference modified +
EntityWithAccessionedSequence modified +
Cell modified +
GO_CellularComponent modified +
PathwayDiagram modified +
ReferenceTherapeutic modified +
Affiliation modified +
CrosslinkedResidue modified +
_Deleted modified +
TranslationalModification modified +
FunctionalStatus modified +
ChemicalDrug modified +
SimpleEntity modified +
NegativeGeneExpressionRegulation modified +
ReplacedResidue modified +
Requirement modified +
NonsenseMutation modified +
BlackBoxEvent modified +
ReviewStatus modified +
RegulationReference modified +
ReferenceRNASequence modified +
GeneticallyModifiedResidue modified +
ReferenceDatabase modified +
PositiveRegulation modified +
CellLineagePath modified +
Drug modified +
CatalystActivity modified +
ReactionType modified +
ReactionlikeEvent modified +
_Release modified +
Publication modified +
NegativeRegulation modified +
InteractionEvent modified +
DatabaseIdentifier modified +
Pathway modified +
NegativePrecedingEvent modified +
FragmentModification modified +
StableIdentifier modified +
FunctionalStatusType modified +
ControlledVocabulary modified +
EntityFunctionalStatus modified +
Species modified +
StableIdentifierReleaseStatus modified +
Summation modified +
FragmentDeletionModification modified +
FragmentInsertionModification modified +
EvidenceType modified +
ModifiedNucleotide modified +
CatalystActivityReference modified +
ProteinDrug modified +
Compartment modified +
DrugActionType modified +
NegativePrecedingEventReason modified +
Polymer modified +
ReferenceEntity modified +
ReferenceIsoform modified +
FailedReaction modified +
MarkerReference modified +
IntraChainCrosslinkedResidue modified +
Book modified +
Regulation modified +
DatabaseObject modified +
InstanceEdit modified +
LiteratureReference modified +
CellType modified +
PsiMod modified +
GO_MolecularFunction modified +
CandidateSet modified +
Taxon modified +
Anatomy modified +
ExternalOntology modified +
AbstractModifiedResidue modified +
OtherEntity modified +
Polymerisation modified +
PhysicalEntity modified +
Event modified +
ReferenceMolecule modified +
GroupModifiedResidue modified +
URL modified +
Reaction modified +
DefinedSet modified +
TranscriptionalModification modified +
RetractionStatus modified +
GO_BiologicalProcess modified +
CellDevelopmentStep modified +
SequenceOntology modified +
FrontPage modified +
DeletedControlledVocabulary modified +
_DeletedInstance modified +
StableIdentifierHistory modified +
PhysicalEntityCellType modified +
Anatomy created 1
CandidateSet created 1
ExternalOntology created 1
Taxon created 1
AbstractModifiedResidue created 1
OtherEntity created 1
PhysicalEntity created 1
Polymerisation created 1
LiteratureReference created 1
InstanceEdit created 1
CellType created 1
PsiMod created 1
GO_MolecularFunction created 1
DatabaseObject created 1
Book created 1
Regulation created 1
_DeletedInstance created 1
PhysicalEntityCellType created 1
StableIdentifierHistory created 1
RetractionStatus created 1
GO_BiologicalProcess created 1
CellDevelopmentStep created 1
DeletedControlledVocabulary created 1
SequenceOntology created 1
FrontPage created 1
DefinedSet created 1
Reaction created 1
TranscriptionalModification created 1
Event created 1
ReferenceMolecule created 1
GroupModifiedResidue created 1
URL created 1
StableIdentifierReleaseStatus created 1
Summation created 1
FragmentDeletionModification created 1
FragmentInsertionModification created 1
ControlledVocabulary created 1
EntityFunctionalStatus created 1
Species created 1
FragmentModification created 1
StableIdentifier created 1
FunctionalStatusType created 1
NegativeRegulation created 1
_Release created 1
Publication created 1
ReactionlikeEvent created 1
DatabaseIdentifier created 1
InteractionEvent created 1
Pathway created 1
NegativePrecedingEvent created 1
ReferenceEntity created 1
IntraChainCrosslinkedResidue created 1
MarkerReference created 1
ReferenceIsoform created 1
FailedReaction created 1
DrugActionType created 1
NegativePrecedingEventReason created 1
Polymer created 1
ProteinDrug created 1
Compartment created 1
EvidenceType created 1
ModifiedNucleotide created 1
CatalystActivityReference created 1
NonsenseMutation created 1
ChemicalDrug created 1
NegativeGeneExpressionRegulation created 1
SimpleEntity created 1
ReplacedResidue created 1
Requirement created 1
FunctionalStatus created 1
CatalystActivity created 1
ReactionType created 1
PositiveRegulation created 1
CellLineagePath created 1
Drug created 1
ReferenceRNASequence created 1
GeneticallyModifiedResidue created 1
ReferenceDatabase created 1
BlackBoxEvent created 1
ReviewStatus created 1
RegulationReference created 1
RNADrug created 1
InterChainCrosslinkedResidue created 1
ReferenceSequence created 1
PositiveGeneExpressionRegulation created 1
ModifiedResidue created 1
FragmentReplacedModification created 1
ReferenceGroup created 1
ReferenceDNASequence created 1
_UpdateTracker created 1
Person created 1
Figure created 1
Complex created 1
Depolymerisation created 1
_Deleted created 1
TranslationalModification created 1
ReferenceTherapeutic created 1
Affiliation created 1
CrosslinkedResidue created 1
GenomeEncodedEntity created 1
Cell created 1
ReferenceGeneProduct created 1
EntityWithAccessionedSequence created 1
ControlReference created 1
GO_CellularComponent created 1
PathwayDiagram created 1
Disease created 1
EntitySet created 1
BlackBoxEvent reviewed +
EntitySet reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
ProteinDrug reviewed +
EntityWithAccessionedSequence reviewed +
Cell reviewed +
Reaction reviewed +
DefinedSet reviewed +
CellDevelopmentStep reviewed +
Polymer reviewed +
CellLineagePath reviewed +
Drug reviewed +
FailedReaction reviewed +
Complex reviewed +
InteractionEvent reviewed +
Depolymerisation reviewed +
Pathway reviewed +
ReactionlikeEvent reviewed +
ChemicalDrug reviewed +
SimpleEntity reviewed +
Polymerisation reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
CandidateSet reviewed +
OtherEntity reviewed +
InteractionEvent revised +
Complex revised +
Depolymerisation revised +
Pathway revised +
ReactionlikeEvent revised +
ChemicalDrug revised +
SimpleEntity revised +
RNADrug revised +
PhysicalEntity revised +
Polymerisation revised +
CandidateSet revised +
OtherEntity revised +
BlackBoxEvent revised +
Event revised +
EntitySet revised +
GenomeEncodedEntity revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
Cell revised +
Reaction revised +
DefinedSet revised +
CellDevelopmentStep revised +
Polymer revised +
CellLineagePath revised +
Drug revised +
FailedReaction revised +
ReactionlikeEvent authored +
Pathway authored +
InteractionEvent authored +
Complex authored 1
Depolymerisation authored +
SimpleEntity authored 1
ChemicalDrug authored 1
OtherEntity authored 1
CandidateSet authored 1
Polymerisation authored +
RNADrug authored 1
PhysicalEntity authored 1
Event authored +
BlackBoxEvent authored +
EntitySet authored 1
DefinedSet authored 1
Reaction authored +
Cell authored 1
GenomeEncodedEntity authored 1
EntityWithAccessionedSequence authored 1
ProteinDrug authored 1
Drug authored 1
CellLineagePath authored +
Polymer authored 1
CellDevelopmentStep authored +
FailedReaction authored +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
_Deleted replacementInstances +
InteractionEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
FailedReaction structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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