Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation structureModified +
BlackBoxEvent structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
Pathway structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
GeneticallyModifiedResidue modified +
MarkerReference modified +
RNADrug modified +
NonsenseMutation modified +
GO_MolecularFunction modified +
StableIdentifierReleaseStatus modified +
_Release modified +
RegulationReference modified +
Compartment modified +
Figure modified +
CellDevelopmentStep modified +
Publication modified +
GenomeEncodedEntity modified +
CatalystActivity modified +
SequenceOntology modified +
StableIdentifierHistory modified +
ReactionlikeEvent modified +
DatabaseObject modified +
Regulation modified +
ReferenceDatabase modified +
CellType modified +
ReferenceTherapeutic modified +
_Deleted modified +
BlackBoxEvent modified +
CrosslinkedResidue modified +
DatabaseIdentifier modified +
Pathway modified +
DefinedSet modified +
TranslationalModification modified +
ProteinDrug modified +
ReferenceMolecule modified +
ReactionType modified +
FragmentModification modified +
ReplacedResidue modified +
NegativeRegulation modified +
PathwayDiagram modified +
ReferenceSequence modified +
Taxon modified +
EntityFunctionalStatus modified +
ExternalOntology modified +
StableIdentifier modified +
DrugActionType modified +
ReferenceGroup modified +
PhysicalEntity modified +
CatalystActivityReference modified +
FailedReaction modified +
Requirement modified +
Book modified +
Anatomy modified +
NegativePrecedingEventReason modified +
FragmentReplacedModification modified +
Event modified +
OtherEntity modified +
Species modified +
_UpdateTracker modified +
GO_CellularComponent modified +
Drug modified +
CandidateSet modified +
FrontPage modified +
ReferenceRNASequence modified +
ModifiedNucleotide modified +
Affiliation modified +
RetractionStatus modified +
_DeletedInstance modified +
Polymerisation modified +
SimpleEntity modified +
Reaction modified +
ChemicalDrug modified +
PhysicalEntityCellType modified +
URL modified +
ReferenceDNASequence modified +
ControlledVocabulary modified +
FragmentDeletionModification modified +
DeletedControlledVocabulary modified +
Depolymerisation modified +
TranscriptionalModification modified +
AbstractModifiedResidue modified +
PositiveGeneExpressionRegulation modified +
EvidenceType modified +
LiteratureReference modified +
PsiMod modified +
PositiveRegulation modified +
InstanceEdit modified +
GroupModifiedResidue modified +
Summation modified +
Disease modified +
CellLineagePath modified +
EntitySet modified +
NegativeGeneExpressionRegulation modified +
ModifiedResidue modified +
FunctionalStatusType modified +
FunctionalStatus modified +
Cell modified +
Person modified +
Polymer modified +
ReferenceGeneProduct modified +
InteractionEvent modified +
ReferenceEntity modified +
Complex modified +
ReviewStatus modified +
InterChainCrosslinkedResidue modified +
IntraChainCrosslinkedResidue modified +
ControlReference modified +
GO_BiologicalProcess modified +
ReferenceIsoform modified +
EntityWithAccessionedSequence modified +
FragmentInsertionModification modified +
NegativePrecedingEvent modified +
PositiveRegulation created 1
InstanceEdit created 1
GroupModifiedResidue created 1
Summation created 1
Disease created 1
EvidenceType created 1
LiteratureReference created 1
PsiMod created 1
Depolymerisation created 1
TranscriptionalModification created 1
DeletedControlledVocabulary created 1
AbstractModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
ControlledVocabulary created 1
FragmentDeletionModification created 1
Reaction created 1
ChemicalDrug created 1
PhysicalEntityCellType created 1
ReferenceDNASequence created 1
URL created 1
_DeletedInstance created 1
Polymerisation created 1
SimpleEntity created 1
RetractionStatus created 1
Drug created 1
CandidateSet created 1
ModifiedNucleotide created 1
FrontPage created 1
ReferenceRNASequence created 1
Affiliation created 1
FragmentInsertionModification created 1
EntityWithAccessionedSequence created 1
ReferenceIsoform created 1
NegativePrecedingEvent created 1
IntraChainCrosslinkedResidue created 1
ControlReference created 1
GO_BiologicalProcess created 1
ReferenceEntity created 1
ReviewStatus created 1
Complex created 1
InterChainCrosslinkedResidue created 1
ReferenceGeneProduct created 1
InteractionEvent created 1
FunctionalStatus created 1
Cell created 1
Person created 1
Polymer created 1
ModifiedResidue created 1
FunctionalStatusType created 1
CellLineagePath created 1
EntitySet created 1
NegativeGeneExpressionRegulation created 1
CrosslinkedResidue created 1
DatabaseIdentifier created 1
ReferenceDatabase created 1
CellType created 1
ReferenceTherapeutic created 1
_Deleted created 1
BlackBoxEvent created 1
ReactionlikeEvent created 1
Regulation created 1
DatabaseObject created 1
SequenceOntology created 1
StableIdentifierHistory created 1
CellDevelopmentStep created 1
Publication created 1
GenomeEncodedEntity created 1
CatalystActivity created 1
RegulationReference created 1
Figure created 1
Compartment created 1
GO_MolecularFunction created 1
StableIdentifierReleaseStatus created 1
_Release created 1
GeneticallyModifiedResidue created 1
MarkerReference created 1
RNADrug created 1
NonsenseMutation created 1
GO_CellularComponent created 1
_UpdateTracker created 1
FragmentReplacedModification created 1
Event created 1
Species created 1
OtherEntity created 1
Book created 1
NegativePrecedingEventReason created 1
Anatomy created 1
FailedReaction created 1
CatalystActivityReference created 1
PhysicalEntity created 1
Requirement created 1
ExternalOntology created 1
StableIdentifier created 1
DrugActionType created 1
ReferenceGroup created 1
NegativeRegulation created 1
PathwayDiagram created 1
ReferenceSequence created 1
Taxon created 1
EntityFunctionalStatus created 1
ProteinDrug created 1
ReferenceMolecule created 1
ReactionType created 1
FragmentModification created 1
ReplacedResidue created 1
Pathway created 1
DefinedSet created 1
TranslationalModification created 1
_Deleted replacementInstances +
EntityWithAccessionedSequence reviewed +
Event reviewed +
OtherEntity reviewed +
BlackBoxEvent reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
Depolymerisation reviewed +
InteractionEvent reviewed +
FailedReaction reviewed +
PhysicalEntity reviewed +
GenomeEncodedEntity reviewed +
Polymer reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
CellDevelopmentStep reviewed +
Cell reviewed +
SimpleEntity reviewed +
Polymerisation reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
RNADrug reviewed +
Drug reviewed +
Pathway reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
InteractionEvent revised +
FailedReaction revised +
PhysicalEntity revised +
Complex revised +
ReactionlikeEvent revised +
Depolymerisation revised +
BlackBoxEvent revised +
OtherEntity revised +
Event revised +
EntityWithAccessionedSequence revised +
RNADrug revised +
CandidateSet revised +
DefinedSet revised +
Drug revised +
Pathway revised +
EntitySet revised +
ProteinDrug revised +
CellLineagePath revised +
SimpleEntity revised +
Polymerisation revised +
Polymer revised +
GenomeEncodedEntity revised +
CellDevelopmentStep revised +
Cell revised +
Reaction revised +
ChemicalDrug revised +
RNADrug authored 1
DefinedSet authored 1
CandidateSet authored 1
Drug authored 1
Pathway authored +
EntitySet authored 1
ProteinDrug authored 1
CellLineagePath authored +
SimpleEntity authored 1
Polymerisation authored +
Polymer authored 1
GenomeEncodedEntity authored 1
Cell authored 1
CellDevelopmentStep authored +
ChemicalDrug authored 1
Reaction authored +
InteractionEvent authored +
FailedReaction authored +
PhysicalEntity authored 1
Complex authored 1
ReactionlikeEvent authored +
Depolymerisation authored +
BlackBoxEvent authored +
OtherEntity authored 1
Event authored +
EntityWithAccessionedSequence authored 1
Event edited +
OtherEntity edited +
BlackBoxEvent edited +
EntityWithAccessionedSequence edited +
FailedReaction edited +
PhysicalEntity edited +
InteractionEvent edited +
ReactionlikeEvent edited +
Depolymerisation edited +
Complex edited +
Polymerisation edited +
SimpleEntity edited +
ChemicalDrug edited +
Reaction edited +
Cell edited +
CellDevelopmentStep edited +
GenomeEncodedEntity edited +
Polymer edited +
Drug edited +
Pathway edited +
CandidateSet edited +
DefinedSet edited +
RNADrug edited +
CellLineagePath edited +
ProteinDrug edited +
EntitySet edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

Follow Reactome