Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Event edited +
CellLineagePath edited +
RNADrug edited +
Pathway edited +
CandidateSet edited +
InteractionEvent edited +
ChemicalDrug edited +
EntitySet edited +
Reaction edited +
ProteinDrug edited +
SimpleEntity edited +
Drug edited +
Depolymerisation edited +
ReactionlikeEvent edited +
Cell edited +
Polymerisation edited +
Polymer edited +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
PhysicalEntity edited +
GenomeEncodedEntity edited +
OtherEntity edited +
FailedReaction edited +
Complex edited +
BlackBoxEvent edited +
DefinedSet edited +
Compartment modified +
Pathway modified +
RNADrug modified +
ReferenceRNASequence modified +
MarkerReference modified +
DatabaseObject modified +
ChemicalDrug modified +
ModifiedNucleotide modified +
ProteinDrug modified +
GroupModifiedResidue modified +
Reaction modified +
Taxon modified +
LiteratureReference modified +
_Release modified +
Depolymerisation modified +
PsiMod modified +
Summation modified +
CrosslinkedResidue modified +
NegativePrecedingEvent modified +
NegativePrecedingEventReason modified +
_UpdateTracker modified +
Figure modified +
FragmentReplacedModification modified +
TranscriptionalModification modified +
ReplacedResidue modified +
ControlledVocabulary modified +
InteractionEvent modified +
ReferenceGeneProduct modified +
ReferenceDNASequence modified +
PositiveRegulation modified +
FunctionalStatusType modified +
Polymer modified +
SequenceOntology modified +
EvidenceType modified +
NonsenseMutation modified +
StableIdentifierReleaseStatus modified +
NegativeRegulation modified +
ExternalOntology modified +
EntityWithAccessionedSequence modified +
FrontPage modified +
BlackBoxEvent modified +
GO_CellularComponent modified +
DefinedSet modified +
TranslationalModification modified +
Requirement modified +
Regulation modified +
CellLineagePath modified +
NegativeGeneExpressionRegulation modified +
Event modified +
Publication modified +
DrugActionType modified +
CandidateSet modified +
ReferenceTherapeutic modified +
FragmentModification modified +
Species modified +
GeneticallyModifiedResidue modified +
Drug modified +
SimpleEntity modified +
PhysicalEntityCellType modified +
Disease modified +
CellDevelopmentStep modified +
InstanceEdit modified +
Polymerisation modified +
CatalystActivity modified +
DatabaseIdentifier modified +
ReferenceDatabase modified +
FunctionalStatus modified +
PositiveGeneExpressionRegulation modified +
ReferenceMolecule modified +
Complex modified +
AbstractModifiedResidue modified +
_Deleted modified +
ReferenceIsoform modified +
FragmentDeletionModification modified +
ControlReference modified +
InterChainCrosslinkedResidue modified +
DeletedControlledVocabulary modified +
StableIdentifierHistory modified +
RegulationReference modified +
_DeletedInstance modified +
Anatomy modified +
CatalystActivityReference modified +
GO_BiologicalProcess modified +
EntitySet modified +
ReactionlikeEvent modified +
Person modified +
EntityFunctionalStatus modified +
RetractionStatus modified +
GO_MolecularFunction modified +
Cell modified +
ModifiedResidue modified +
OtherEntity modified +
PathwayDiagram modified +
GenomeEncodedEntity modified +
IntraChainCrosslinkedResidue modified +
PhysicalEntity modified +
ReferenceSequence modified +
ReactionType modified +
StableIdentifier modified +
CellType modified +
URL modified +
FailedReaction modified +
ReferenceEntity modified +
ReferenceGroup modified +
ReviewStatus modified +
FragmentInsertionModification modified +
Affiliation modified +
Book modified +
BlackBoxEvent revised +
Complex revised +
FailedReaction revised +
DefinedSet revised +
Polymerisation revised +
Polymer revised +
Cell revised +
CellDevelopmentStep revised +
GenomeEncodedEntity revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
OtherEntity revised +
EntitySet revised +
Reaction revised +
ProteinDrug revised +
ReactionlikeEvent revised +
Drug revised +
Depolymerisation revised +
SimpleEntity revised +
Event revised +
CellLineagePath revised +
Pathway revised +
RNADrug revised +
CandidateSet revised +
ChemicalDrug revised +
InteractionEvent revised +
_Deleted replacementInstances +
FailedReaction authored +
BlackBoxEvent authored +
Complex authored 1
DefinedSet authored 1
Polymer authored 1
Polymerisation authored +
Cell authored 1
CellDevelopmentStep authored +
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
GenomeEncodedEntity authored 1
OtherEntity authored 1
EntitySet authored 1
Reaction authored +
ProteinDrug authored 1
SimpleEntity authored 1
Drug authored 1
Depolymerisation authored +
ReactionlikeEvent authored +
Event authored +
CellLineagePath authored +
Pathway authored +
RNADrug authored 1
CandidateSet authored 1
ChemicalDrug authored 1
InteractionEvent authored +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
PhysicalEntity reviewed +
EntityWithAccessionedSequence reviewed +
CellDevelopmentStep reviewed +
Polymerisation reviewed +
Cell reviewed +
Polymer reviewed +
DefinedSet reviewed +
BlackBoxEvent reviewed +
Complex reviewed +
FailedReaction reviewed +
InteractionEvent reviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
CellLineagePath reviewed +
RNADrug reviewed +
Pathway reviewed +
Event reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
ProteinDrug reviewed +
Reaction reviewed +
EntitySet reviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
Event structureModified +
InteractionEvent structureModified +
ReferenceGeneProduct created 1
InteractionEvent created 1
ControlledVocabulary created 1
FunctionalStatusType created 1
ReferenceDNASequence created 1
PositiveRegulation created 1
StableIdentifierReleaseStatus created 1
EvidenceType created 1
NonsenseMutation created 1
NegativeRegulation created 1
ExternalOntology created 1
EntityWithAccessionedSequence created 1
Polymer created 1
SequenceOntology created 1
DefinedSet created 1
Requirement created 1
Regulation created 1
TranslationalModification created 1
FrontPage created 1
GO_CellularComponent created 1
BlackBoxEvent created 1
DatabaseObject created 1
ChemicalDrug created 1
Compartment created 1
ReferenceRNASequence created 1
Pathway created 1
RNADrug created 1
MarkerReference created 1
PsiMod created 1
Depolymerisation created 1
Summation created 1
CrosslinkedResidue created 1
NegativePrecedingEvent created 1
_UpdateTracker created 1
NegativePrecedingEventReason created 1
ModifiedNucleotide created 1
GroupModifiedResidue created 1
ProteinDrug created 1
Reaction created 1
Taxon created 1
LiteratureReference created 1
_Release created 1
Figure created 1
TranscriptionalModification created 1
FragmentReplacedModification created 1
ReplacedResidue created 1
StableIdentifierHistory created 1
RegulationReference created 1
_DeletedInstance created 1
InterChainCrosslinkedResidue created 1
DeletedControlledVocabulary created 1
ReactionlikeEvent created 1
EntityFunctionalStatus created 1
Person created 1
Anatomy created 1
CatalystActivityReference created 1
EntitySet created 1
GO_BiologicalProcess created 1
ModifiedResidue created 1
PathwayDiagram created 1
OtherEntity created 1
GenomeEncodedEntity created 1
ReferenceSequence created 1
IntraChainCrosslinkedResidue created 1
PhysicalEntity created 1
ReactionType created 1
RetractionStatus created 1
GO_MolecularFunction created 1
Cell created 1
FragmentInsertionModification created 1
Affiliation created 1
Book created 1
StableIdentifier created 1
CellType created 1
URL created 1
FailedReaction created 1
ReferenceEntity created 1
ReferenceGroup created 1
ReviewStatus created 1
Publication created 1
DrugActionType created 1
CandidateSet created 1
ReferenceTherapeutic created 1
NegativeGeneExpressionRegulation created 1
CellLineagePath created 1
Event created 1
Drug created 1
SimpleEntity created 1
PhysicalEntityCellType created 1
Species created 1
FragmentModification created 1
GeneticallyModifiedResidue created 1
CatalystActivity created 1
ReferenceDatabase created 1
DatabaseIdentifier created 1
FunctionalStatus created 1
PositiveGeneExpressionRegulation created 1
Disease created 1
CellDevelopmentStep created 1
InstanceEdit created 1
Polymerisation created 1
FragmentDeletionModification created 1
ReferenceIsoform created 1
ControlReference created 1
Complex created 1
ReferenceMolecule created 1
_Deleted created 1
AbstractModifiedResidue created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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