Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Drug edited +
DefinedSet edited +
Polymerisation edited +
PhysicalEntity edited +
Cell edited +
Depolymerisation edited +
ReactionlikeEvent edited +
EntityWithAccessionedSequence edited +
BlackBoxEvent edited +
Complex edited +
OtherEntity edited +
ProteinDrug edited +
FailedReaction edited +
RNADrug edited +
CellLineagePath edited +
SimpleEntity edited +
CellDevelopmentStep edited +
Pathway edited +
Reaction edited +
GenomeEncodedEntity edited +
Polymer edited +
Event edited +
InteractionEvent edited +
ChemicalDrug edited +
EntitySet edited +
CandidateSet edited +
InterChainCrosslinkedResidue created 1
Book created 1
NegativePrecedingEvent created 1
TranscriptionalModification created 1
Summation created 1
InteractionEvent created 1
Anatomy created 1
ExternalOntology created 1
FrontPage created 1
RNADrug created 1
Complex created 1
BlackBoxEvent created 1
_DeletedInstance created 1
Regulation created 1
ReactionlikeEvent created 1
DeletedControlledVocabulary created 1
CatalystActivity created 1
FragmentReplacedModification created 1
Species created 1
EntityFunctionalStatus created 1
ControlReference created 1
Requirement created 1
NegativeGeneExpressionRegulation created 1
ReferenceDNASequence created 1
ReferenceTherapeutic created 1
Compartment created 1
Figure created 1
ChemicalDrug created 1
Disease created 1
IntraChainCrosslinkedResidue created 1
ReferenceMolecule created 1
EvidenceType created 1
Reaction created 1
Taxon created 1
InstanceEdit created 1
CellLineagePath created 1
Affiliation created 1
ModifiedNucleotide created 1
PositiveRegulation created 1
MarkerReference created 1
ReferenceGroup created 1
EntityWithAccessionedSequence created 1
ReferenceGeneProduct created 1
GO_CellularComponent created 1
ReactionType created 1
ReferenceIsoform created 1
LiteratureReference created 1
GO_MolecularFunction created 1
CatalystActivityReference created 1
ReferenceRNASequence created 1
DrugActionType created 1
FunctionalStatus created 1
PhysicalEntityCellType created 1
AbstractModifiedResidue created 1
RegulationReference created 1
StableIdentifierReleaseStatus created 1
ControlledVocabulary created 1
SequenceOntology created 1
StableIdentifier created 1
CellType created 1
Polymer created 1
FragmentInsertionModification created 1
SimpleEntity created 1
TranslationalModification created 1
CellDevelopmentStep created 1
NegativeRegulation created 1
Pathway created 1
PsiMod created 1
GO_BiologicalProcess created 1
ProteinDrug created 1
FailedReaction created 1
FunctionalStatusType created 1
Publication created 1
Depolymerisation created 1
ReplacedResidue created 1
ReferenceSequence created 1
Polymerisation created 1
Cell created 1
PhysicalEntity created 1
PositiveGeneExpressionRegulation created 1
_Release created 1
DatabaseIdentifier created 1
EntitySet created 1
CandidateSet created 1
URL created 1
FragmentModification created 1
ModifiedResidue created 1
GeneticallyModifiedResidue created 1
Event created 1
NonsenseMutation created 1
NegativePrecedingEventReason created 1
_UpdateTracker created 1
GenomeEncodedEntity created 1
FragmentDeletionModification created 1
OtherEntity created 1
ReferenceDatabase created 1
GroupModifiedResidue created 1
Person created 1
RetractionStatus created 1
_Deleted created 1
StableIdentifierHistory created 1
DefinedSet created 1
CrosslinkedResidue created 1
Drug created 1
DatabaseObject created 1
ReferenceEntity created 1
ReviewStatus created 1
PathwayDiagram created 1
_Deleted replacementInstances +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Complex reviewed +
BlackBoxEvent reviewed +
CellLineagePath reviewed +
FailedReaction reviewed +
RNADrug reviewed +
OtherEntity reviewed +
ProteinDrug reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
Depolymerisation reviewed +
EntityWithAccessionedSequence reviewed +
Polymerisation reviewed +
DefinedSet reviewed +
PhysicalEntity reviewed +
Cell reviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
EntitySet reviewed +
GenomeEncodedEntity reviewed +
Reaction reviewed +
Pathway reviewed +
CellDevelopmentStep reviewed +
SimpleEntity reviewed +
InteractionEvent reviewed +
Event reviewed +
Polymer reviewed +
CandidateSet authored 1
EntitySet authored 1
ChemicalDrug authored 1
InteractionEvent authored +
Event authored +
Polymer authored 1
GenomeEncodedEntity authored 1
Reaction authored +
Pathway authored +
CellDevelopmentStep authored +
SimpleEntity authored 1
CellLineagePath authored +
RNADrug authored 1
FailedReaction authored +
OtherEntity authored 1
ProteinDrug authored 1
Complex authored 1
BlackBoxEvent authored +
Depolymerisation authored +
ReactionlikeEvent authored +
EntityWithAccessionedSequence authored 1
DefinedSet authored 1
Polymerisation authored +
Cell authored 1
PhysicalEntity authored 1
Drug authored 1
FailedReaction structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
Event structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
Reaction structureModified +
Event revised +
InteractionEvent revised +
Polymer revised +
GenomeEncodedEntity revised +
Reaction revised +
Pathway revised +
SimpleEntity revised +
CellDevelopmentStep revised +
EntitySet revised +
CandidateSet revised +
ChemicalDrug revised +
Depolymerisation revised +
EntityWithAccessionedSequence revised +
ReactionlikeEvent revised +
PhysicalEntity revised +
DefinedSet revised +
Polymerisation revised +
Cell revised +
Drug revised +
CellLineagePath revised +
RNADrug revised +
FailedReaction revised +
ProteinDrug revised +
OtherEntity revised +
Complex revised +
BlackBoxEvent revised +
StableIdentifier modified +
CellType modified +
SequenceOntology modified +
Polymer modified +
ControlledVocabulary modified +
SimpleEntity modified +
TranslationalModification modified +
CellDevelopmentStep modified +
Pathway modified +
NegativeRegulation modified +
FragmentInsertionModification modified +
CatalystActivityReference modified +
ReferenceIsoform modified +
LiteratureReference modified +
GO_MolecularFunction modified +
RegulationReference modified +
AbstractModifiedResidue modified +
StableIdentifierReleaseStatus modified +
ReferenceRNASequence modified +
PhysicalEntityCellType modified +
DrugActionType modified +
FunctionalStatus modified +
ReplacedResidue modified +
Cell modified +
Polymerisation modified +
ReferenceSequence modified +
PhysicalEntity modified +
Depolymerisation modified +
Publication modified +
_Release modified +
PositiveGeneExpressionRegulation modified +
ProteinDrug modified +
FailedReaction modified +
PsiMod modified +
GO_BiologicalProcess modified +
FunctionalStatusType modified +
NegativePrecedingEventReason modified +
_UpdateTracker modified +
Event modified +
NonsenseMutation modified +
GenomeEncodedEntity modified +
FragmentDeletionModification modified +
EntitySet modified +
DatabaseIdentifier modified +
CandidateSet modified +
URL modified +
GeneticallyModifiedResidue modified +
ModifiedResidue modified +
FragmentModification modified +
DefinedSet modified +
_Deleted modified +
StableIdentifierHistory modified +
ReviewStatus modified +
ReferenceEntity modified +
PathwayDiagram modified +
CrosslinkedResidue modified +
DatabaseObject modified +
Drug modified +
ReferenceDatabase modified +
OtherEntity modified +
Person modified +
GroupModifiedResidue modified +
RetractionStatus modified +
ExternalOntology modified +
Anatomy modified +
InteractionEvent modified +
FrontPage modified +
TranscriptionalModification modified +
NegativePrecedingEvent modified +
Book modified +
InterChainCrosslinkedResidue modified +
Summation modified +
DeletedControlledVocabulary modified +
ReactionlikeEvent modified +
Regulation modified +
Requirement modified +
ControlReference modified +
NegativeGeneExpressionRegulation modified +
CatalystActivity modified +
FragmentReplacedModification modified +
EntityFunctionalStatus modified +
Species modified +
RNADrug modified +
BlackBoxEvent modified +
_DeletedInstance modified +
Complex modified +
ReferenceMolecule modified +
EvidenceType modified +
IntraChainCrosslinkedResidue modified +
InstanceEdit modified +
Reaction modified +
Taxon modified +
ReferenceTherapeutic modified +
ReferenceDNASequence modified +
Disease modified +
Compartment modified +
ChemicalDrug modified +
Figure modified +
ReferenceGeneProduct modified +
EntityWithAccessionedSequence modified +
GO_CellularComponent modified +
ReactionType modified +
ModifiedNucleotide modified +
Affiliation modified +
CellLineagePath modified +
MarkerReference modified +
ReferenceGroup modified +
PositiveRegulation modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

Follow Reactome