Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellDevelopmentStep authored +
DefinedSet authored 1
Reaction authored +
Complex authored 1
Pathway authored +
EntityWithAccessionedSequence authored 1
OtherEntity authored 1
CandidateSet authored 1
EntitySet authored 1
Drug authored 1
ReactionlikeEvent authored +
Polymerisation authored +
RNADrug authored 1
SimpleEntity authored 1
FailedReaction authored +
ProteinDrug authored 1
BlackBoxEvent authored +
Polymer authored 1
PhysicalEntity authored 1
Event authored +
GenomeEncodedEntity authored 1
InteractionEvent authored +
ChemicalDrug authored 1
Cell authored 1
CellLineagePath authored +
Depolymerisation authored +
GenomeEncodedEntity modified +
Event modified +
Taxon modified +
CatalystActivityReference modified +
NegativeRegulation modified +
Book modified +
FailedReaction modified +
TranslationalModification modified +
ReplacedResidue modified +
EvidenceType modified +
DatabaseObject modified +
Polymer modified +
Requirement modified +
BlackBoxEvent modified +
ReferenceMolecule modified +
PhysicalEntity modified +
_Release modified +
DatabaseIdentifier modified +
Pathway modified +
ReferenceGeneProduct modified +
Disease modified +
ReferenceIsoform modified +
Polymerisation modified +
GO_BiologicalProcess modified +
ReviewStatus modified +
CatalystActivity modified +
GO_CellularComponent modified +
Regulation modified +
SequenceOntology modified +
StableIdentifierReleaseStatus modified +
Reaction modified +
Complex modified +
_Deleted modified +
MarkerReference modified +
Species modified +
InteractionEvent modified +
CellLineagePath modified +
FragmentDeletionModification modified +
ControlReference modified +
PositiveGeneExpressionRegulation modified +
RNADrug modified +
FunctionalStatus modified +
StableIdentifier modified +
EntityWithAccessionedSequence modified +
FragmentInsertionModification modified +
Compartment modified +
Person modified +
RegulationReference modified +
GeneticallyModifiedResidue modified +
TranscriptionalModification modified +
PathwayDiagram modified +
ModifiedResidue modified +
ReferenceTherapeutic modified +
ChemicalDrug modified +
GO_MolecularFunction modified +
IntraChainCrosslinkedResidue modified +
InterChainCrosslinkedResidue modified +
Depolymerisation modified +
ReferenceGroup modified +
URL modified +
PsiMod modified +
FragmentReplacedModification modified +
NegativePrecedingEventReason modified +
InstanceEdit modified +
OtherEntity modified +
EntitySet modified +
Affiliation modified +
CandidateSet modified +
ControlledVocabulary modified +
ReactionlikeEvent modified +
FragmentModification modified +
Figure modified +
_DeletedInstance modified +
StableIdentifierHistory modified +
DeletedControlledVocabulary modified +
ReferenceRNASequence modified +
LiteratureReference modified +
NegativePrecedingEvent modified +
DefinedSet modified +
DrugActionType modified +
CellType modified +
Anatomy modified +
AbstractModifiedResidue modified +
Cell modified +
EntityFunctionalStatus modified +
ReferenceDNASequence modified +
ModifiedNucleotide modified +
Publication modified +
ReferenceDatabase modified +
ReferenceEntity modified +
SimpleEntity modified +
ProteinDrug modified +
_UpdateTracker modified +
GroupModifiedResidue modified +
Summation modified +
PhysicalEntityCellType modified +
NonsenseMutation modified +
ReferenceSequence modified +
FrontPage modified +
FunctionalStatusType modified +
Drug modified +
RetractionStatus modified +
ReactionType modified +
NegativeGeneExpressionRegulation modified +
CellDevelopmentStep modified +
CrosslinkedResidue modified +
ExternalOntology modified +
PositiveRegulation modified +
_Deleted replacementInstances +
GO_CellularComponent created 1
CatalystActivity created 1
Regulation created 1
GO_BiologicalProcess created 1
ReviewStatus created 1
Complex created 1
SequenceOntology created 1
StableIdentifierReleaseStatus created 1
Reaction created 1
Disease created 1
ReferenceGeneProduct created 1
DatabaseIdentifier created 1
_Release created 1
Pathway created 1
Polymerisation created 1
ReferenceIsoform created 1
ReplacedResidue created 1
EvidenceType created 1
DatabaseObject created 1
Book created 1
FailedReaction created 1
TranslationalModification created 1
ReferenceMolecule created 1
PhysicalEntity created 1
Polymer created 1
Requirement created 1
BlackBoxEvent created 1
Taxon created 1
GenomeEncodedEntity created 1
Event created 1
NegativeRegulation created 1
CatalystActivityReference created 1
PathwayDiagram created 1
RegulationReference created 1
TranscriptionalModification created 1
Person created 1
GeneticallyModifiedResidue created 1
ReferenceTherapeutic created 1
ModifiedResidue created 1
FragmentInsertionModification created 1
StableIdentifier created 1
FunctionalStatus created 1
EntityWithAccessionedSequence created 1
Compartment created 1
RNADrug created 1
InteractionEvent created 1
MarkerReference created 1
_Deleted created 1
Species created 1
ControlReference created 1
PositiveGeneExpressionRegulation created 1
CellLineagePath created 1
FragmentDeletionModification created 1
LiteratureReference created 1
DeletedControlledVocabulary created 1
ReferenceRNASequence created 1
CellType created 1
DrugActionType created 1
DefinedSet created 1
NegativePrecedingEvent created 1
Affiliation created 1
EntitySet created 1
CandidateSet created 1
ControlledVocabulary created 1
InstanceEdit created 1
OtherEntity created 1
Figure created 1
_DeletedInstance created 1
StableIdentifierHistory created 1
FragmentModification created 1
ReactionlikeEvent created 1
PsiMod created 1
ReferenceGroup created 1
URL created 1
NegativePrecedingEventReason created 1
FragmentReplacedModification created 1
ChemicalDrug created 1
GO_MolecularFunction created 1
Depolymerisation created 1
IntraChainCrosslinkedResidue created 1
InterChainCrosslinkedResidue created 1
CrosslinkedResidue created 1
ExternalOntology created 1
NegativeGeneExpressionRegulation created 1
ReactionType created 1
CellDevelopmentStep created 1
PositiveRegulation created 1
FrontPage created 1
ReferenceSequence created 1
FunctionalStatusType created 1
NonsenseMutation created 1
RetractionStatus created 1
Drug created 1
ProteinDrug created 1
GroupModifiedResidue created 1
_UpdateTracker created 1
ReferenceDatabase created 1
ReferenceEntity created 1
SimpleEntity created 1
Summation created 1
PhysicalEntityCellType created 1
Cell created 1
AbstractModifiedResidue created 1
EntityFunctionalStatus created 1
Anatomy created 1
Publication created 1
ReferenceDNASequence created 1
ModifiedNucleotide created 1
FailedReaction structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Event structureModified +
Pathway structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Pathway revised +
EntityWithAccessionedSequence revised +
OtherEntity revised +
EntitySet revised +
CandidateSet revised +
ReactionlikeEvent revised +
Drug revised +
Polymerisation revised +
CellDevelopmentStep revised +
Reaction revised +
DefinedSet revised +
Complex revised +
GenomeEncodedEntity revised +
Event revised +
Cell revised +
InteractionEvent revised +
ChemicalDrug revised +
CellLineagePath revised +
Depolymerisation revised +
RNADrug revised +
FailedReaction revised +
SimpleEntity revised +
ProteinDrug revised +
Polymer revised +
BlackBoxEvent revised +
PhysicalEntity revised +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
CandidateSet edited +
EntitySet edited +
EntityWithAccessionedSequence edited +
OtherEntity edited +
Pathway edited +
Polymerisation edited +
Drug edited +
ReactionlikeEvent edited +
CellDevelopmentStep edited +
Complex edited +
DefinedSet edited +
Reaction edited +
InteractionEvent edited +
ChemicalDrug edited +
Cell edited +
Event edited +
GenomeEncodedEntity edited +
Depolymerisation edited +
CellLineagePath edited +
ProteinDrug edited +
RNADrug edited +
SimpleEntity edited +
FailedReaction edited +
PhysicalEntity edited +
BlackBoxEvent edited +
Polymer edited +
Reaction reviewed +
DefinedSet reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
ReactionlikeEvent reviewed +
Drug reviewed +
Polymerisation reviewed +
EntityWithAccessionedSequence reviewed +
OtherEntity reviewed +
Pathway reviewed +
EntitySet reviewed +
CandidateSet reviewed +
Polymer reviewed +
BlackBoxEvent reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
RNADrug reviewed +
SimpleEntity reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
Depolymerisation reviewed +
GenomeEncodedEntity reviewed +
Event reviewed +
Cell reviewed +
ChemicalDrug reviewed +
InteractionEvent reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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