Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Drug edited +
Complex edited +
Reaction edited +
ProteinDrug edited +
RNADrug edited +
SimpleEntity edited +
ReactionlikeEvent edited +
EntitySet edited +
Pathway edited +
Cell edited +
OtherEntity edited +
Event edited +
Polymer edited +
CellLineagePath edited +
DefinedSet edited +
ChemicalDrug edited +
FailedReaction edited +
CellDevelopmentStep edited +
CandidateSet edited +
BlackBoxEvent edited +
EntityWithAccessionedSequence edited +
GenomeEncodedEntity edited +
Polymerisation edited +
PhysicalEntity edited +
InteractionEvent edited +
Depolymerisation edited +
EntitySet authored 1
Pathway authored +
Cell authored 1
OtherEntity authored 1
Event authored +
CellLineagePath authored +
Polymer authored 1
DefinedSet authored 1
Drug authored 1
Complex authored 1
Reaction authored +
RNADrug authored 1
ProteinDrug authored 1
SimpleEntity authored 1
ReactionlikeEvent authored +
Polymerisation authored +
PhysicalEntity authored 1
InteractionEvent authored +
Depolymerisation authored +
ChemicalDrug authored 1
FailedReaction authored +
CellDevelopmentStep authored +
CandidateSet authored 1
BlackBoxEvent authored +
GenomeEncodedEntity authored 1
EntityWithAccessionedSequence authored 1
ReactionlikeEvent reviewed +
SimpleEntity reviewed +
Complex reviewed +
Reaction reviewed +
RNADrug reviewed +
ProteinDrug reviewed +
Drug reviewed +
DefinedSet reviewed +
Event reviewed +
Polymer reviewed +
CellLineagePath reviewed +
Pathway reviewed +
Cell reviewed +
OtherEntity reviewed +
EntitySet reviewed +
EntityWithAccessionedSequence reviewed +
GenomeEncodedEntity reviewed +
CandidateSet reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
FailedReaction reviewed +
CellDevelopmentStep reviewed +
InteractionEvent reviewed +
Depolymerisation reviewed +
Polymerisation reviewed +
PhysicalEntity reviewed +
URL modified +
ReactionlikeEvent modified +
StableIdentifier modified +
CatalystActivity modified +
OtherEntity modified +
Requirement modified +
FunctionalStatus modified +
LiteratureReference modified +
FailedReaction modified +
ChemicalDrug modified +
FrontPage modified +
PathwayDiagram modified +
IntraChainCrosslinkedResidue modified +
GenomeEncodedEntity modified +
CellType modified +
TranslationalModification modified +
EvidenceType modified +
Person modified +
Book modified +
NegativeRegulation modified +
Regulation modified +
GO_BiologicalProcess modified +
Complex modified +
Drug modified +
DatabaseObject modified +
Summation modified +
Publication modified +
_Release modified +
_Deleted modified +
Compartment modified +
Cell modified +
FragmentDeletionModification modified +
DefinedSet modified +
Polymer modified +
CellLineagePath modified +
ReferenceEntity modified +
ReferenceDatabase modified +
CrosslinkedResidue modified +
ControlReference modified +
CandidateSet modified +
ReferenceGeneProduct modified +
GO_CellularComponent modified +
DrugActionType modified +
RegulationReference modified +
Disease modified +
DatabaseIdentifier modified +
StableIdentifierReleaseStatus modified +
ReferenceRNASequence modified +
NonsenseMutation modified +
TranscriptionalModification modified +
FragmentModification modified +
ReviewStatus modified +
ProteinDrug modified +
RNADrug modified +
Reaction modified +
ReferenceGroup modified +
GeneticallyModifiedResidue modified +
CatalystActivityReference modified +
SimpleEntity modified +
InterChainCrosslinkedResidue modified +
Pathway modified +
EntitySet modified +
DeletedControlledVocabulary modified +
PhysicalEntityCellType modified +
FunctionalStatusType modified +
GroupModifiedResidue modified +
ModifiedNucleotide modified +
ExternalOntology modified +
ReferenceSequence modified +
ControlledVocabulary modified +
AbstractModifiedResidue modified +
ReactionType modified +
NegativePrecedingEventReason modified +
SequenceOntology modified +
PositiveGeneExpressionRegulation modified +
Depolymerisation modified +
InteractionEvent modified +
ModifiedResidue modified +
PositiveRegulation modified +
Affiliation modified +
GO_MolecularFunction modified +
Taxon modified +
NegativePrecedingEvent modified +
MarkerReference modified +
FragmentReplacedModification modified +
ReferenceDNASequence modified +
InstanceEdit modified +
PsiMod modified +
Event modified +
StableIdentifierHistory modified +
BlackBoxEvent modified +
_DeletedInstance modified +
Species modified +
CellDevelopmentStep modified +
NegativeGeneExpressionRegulation modified +
ReferenceTherapeutic modified +
_UpdateTracker modified +
RetractionStatus modified +
EntityFunctionalStatus modified +
ReferenceIsoform modified +
ReplacedResidue modified +
EntityWithAccessionedSequence modified +
FragmentInsertionModification modified +
ReferenceMolecule modified +
Figure modified +
PhysicalEntity modified +
Polymerisation modified +
Anatomy modified +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
Pathway structureModified +
CellLineagePath structureModified +
Event structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
_Deleted replacementInstances +
CellDevelopmentStep revised +
FailedReaction revised +
ChemicalDrug revised +
BlackBoxEvent revised +
CandidateSet revised +
EntityWithAccessionedSequence revised +
GenomeEncodedEntity revised +
PhysicalEntity revised +
Polymerisation revised +
Depolymerisation revised +
InteractionEvent revised +
Drug revised +
ProteinDrug revised +
RNADrug revised +
Reaction revised +
Complex revised +
SimpleEntity revised +
ReactionlikeEvent revised +
EntitySet revised +
OtherEntity revised +
Cell revised +
Pathway revised +
CellLineagePath revised +
Event revised +
Polymer revised +
DefinedSet revised +
ReviewStatus created 1
FragmentModification created 1
TranscriptionalModification created 1
NonsenseMutation created 1
StableIdentifierReleaseStatus created 1
ReferenceRNASequence created 1
RegulationReference created 1
DrugActionType created 1
Disease created 1
DatabaseIdentifier created 1
ReferenceGeneProduct created 1
GO_CellularComponent created 1
ReferenceDatabase created 1
CandidateSet created 1
CrosslinkedResidue created 1
ControlReference created 1
CellLineagePath created 1
Polymer created 1
ReferenceEntity created 1
DefinedSet created 1
Compartment created 1
FragmentDeletionModification created 1
Cell created 1
_Release created 1
_Deleted created 1
Publication created 1
Drug created 1
Summation created 1
DatabaseObject created 1
GO_BiologicalProcess created 1
Complex created 1
NegativeRegulation created 1
Regulation created 1
Book created 1
TranslationalModification created 1
EvidenceType created 1
CellType created 1
Person created 1
IntraChainCrosslinkedResidue created 1
GenomeEncodedEntity created 1
PathwayDiagram created 1
FrontPage created 1
FailedReaction created 1
ChemicalDrug created 1
LiteratureReference created 1
FunctionalStatus created 1
OtherEntity created 1
Requirement created 1
CatalystActivity created 1
ReactionlikeEvent created 1
StableIdentifier created 1
URL created 1
Anatomy created 1
PhysicalEntity created 1
Polymerisation created 1
ReferenceMolecule created 1
FragmentInsertionModification created 1
Figure created 1
ReplacedResidue created 1
EntityWithAccessionedSequence created 1
EntityFunctionalStatus created 1
RetractionStatus created 1
ReferenceIsoform created 1
CellDevelopmentStep created 1
ReferenceTherapeutic created 1
NegativeGeneExpressionRegulation created 1
_UpdateTracker created 1
BlackBoxEvent created 1
_DeletedInstance created 1
Species created 1
StableIdentifierHistory created 1
Event created 1
ReferenceDNASequence created 1
PsiMod created 1
InstanceEdit created 1
FragmentReplacedModification created 1
NegativePrecedingEvent created 1
MarkerReference created 1
Taxon created 1
PositiveRegulation created 1
GO_MolecularFunction created 1
Affiliation created 1
Depolymerisation created 1
InteractionEvent created 1
ModifiedResidue created 1
SequenceOntology created 1
PositiveGeneExpressionRegulation created 1
NegativePrecedingEventReason created 1
ReactionType created 1
ReferenceSequence created 1
ControlledVocabulary created 1
AbstractModifiedResidue created 1
GroupModifiedResidue created 1
ExternalOntology created 1
ModifiedNucleotide created 1
PhysicalEntityCellType created 1
FunctionalStatusType created 1
EntitySet created 1
DeletedControlledVocabulary created 1
InterChainCrosslinkedResidue created 1
Pathway created 1
CatalystActivityReference created 1
SimpleEntity created 1
GeneticallyModifiedResidue created 1
ReferenceGroup created 1
RNADrug created 1
ProteinDrug created 1
Reaction created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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