Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Drug reviewed +
CellLineagePath reviewed +
Reaction reviewed +
Cell reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
OtherEntity reviewed +
CellDevelopmentStep reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
ChemicalDrug reviewed +
Complex reviewed +
Polymer reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
BlackBoxEvent reviewed +
Polymerisation reviewed +
Event reviewed +
Pathway reviewed +
SimpleEntity reviewed +
EntitySet reviewed +
InteractionEvent reviewed +
PhysicalEntity reviewed +
ReactionlikeEvent reviewed +
ProteinDrug reviewed +
RNADrug reviewed +
Depolymerisation structureModified +
Polymerisation structureModified +
Event structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Polymer revised +
GenomeEncodedEntity revised +
ChemicalDrug revised +
Complex revised +
Polymerisation revised +
Event revised +
EntityWithAccessionedSequence revised +
CandidateSet revised +
BlackBoxEvent revised +
EntitySet revised +
InteractionEvent revised +
PhysicalEntity revised +
Pathway revised +
SimpleEntity revised +
ProteinDrug revised +
RNADrug revised +
ReactionlikeEvent revised +
CellLineagePath revised +
Reaction revised +
Drug revised +
Depolymerisation revised +
Cell revised +
CellDevelopmentStep revised +
FailedReaction revised +
OtherEntity revised +
DefinedSet revised +
BlackBoxEvent authored +
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
Event authored +
Polymerisation authored +
ChemicalDrug authored 1
Complex authored 1
GenomeEncodedEntity authored 1
Polymer authored 1
ReactionlikeEvent authored +
RNADrug authored 1
ProteinDrug authored 1
SimpleEntity authored 1
Pathway authored +
PhysicalEntity authored 1
InteractionEvent authored +
EntitySet authored 1
Cell authored 1
Depolymerisation authored +
Drug authored 1
Reaction authored +
CellLineagePath authored +
DefinedSet authored 1
FailedReaction authored +
OtherEntity authored 1
CellDevelopmentStep authored +
Event edited +
Polymerisation edited +
BlackBoxEvent edited +
EntityWithAccessionedSequence edited +
CandidateSet edited +
Polymer edited +
ChemicalDrug edited +
Complex edited +
GenomeEncodedEntity edited +
RNADrug edited +
ProteinDrug edited +
ReactionlikeEvent edited +
PhysicalEntity edited +
EntitySet edited +
InteractionEvent edited +
SimpleEntity edited +
Pathway edited +
Depolymerisation edited +
Cell edited +
Reaction edited +
CellLineagePath edited +
Drug edited +
DefinedSet edited +
CellDevelopmentStep edited +
OtherEntity edited +
FailedReaction edited +
PositiveGeneExpressionRegulation modified +
ControlledVocabulary modified +
Polymerisation modified +
CellType modified +
LiteratureReference modified +
EntitySet modified +
FunctionalStatusType modified +
DeletedControlledVocabulary modified +
ModifiedResidue modified +
_UpdateTracker modified +
PathwayDiagram modified +
Drug modified +
FrontPage modified +
Figure modified +
ReferenceSequence modified +
OtherEntity modified +
GroupModifiedResidue modified +
CatalystActivityReference modified +
RetractionStatus modified +
EntityFunctionalStatus modified +
InterChainCrosslinkedResidue modified +
Compartment modified +
GenomeEncodedEntity modified +
Anatomy modified +
SimpleEntity modified +
NonsenseMutation modified +
Pathway modified +
RNADrug modified +
StableIdentifier modified +
Publication modified +
InstanceEdit modified +
ReactionlikeEvent modified +
Summation modified +
ReferenceIsoform modified +
CellLineagePath modified +
Species modified +
Book modified +
PsiMod modified +
ReferenceGroup modified +
AbstractModifiedResidue modified +
ReferenceEntity modified +
ModifiedNucleotide modified +
StableIdentifierReleaseStatus modified +
FailedReaction modified +
PhysicalEntityCellType modified +
GO_BiologicalProcess modified +
Requirement modified +
DefinedSet modified +
FragmentReplacedModification modified +
FunctionalStatus modified +
Polymer modified +
NegativeRegulation modified +
DatabaseIdentifier modified +
Affiliation modified +
Complex modified +
Event modified +
BlackBoxEvent modified +
EntityWithAccessionedSequence modified +
FragmentDeletionModification modified +
CandidateSet modified +
_Release modified +
PhysicalEntity modified +
InteractionEvent modified +
CatalystActivity modified +
ReactionType modified +
_DeletedInstance modified +
URL modified +
CrosslinkedResidue modified +
ReplacedResidue modified +
RegulationReference modified +
Person modified +
GeneticallyModifiedResidue modified +
FragmentModification modified +
ReferenceMolecule modified +
Depolymerisation modified +
EvidenceType modified +
ReferenceRNASequence modified +
NegativePrecedingEvent modified +
Taxon modified +
DrugActionType modified +
NegativeGeneExpressionRegulation modified +
SequenceOntology modified +
ReferenceTherapeutic modified +
ChemicalDrug modified +
GO_CellularComponent modified +
TranscriptionalModification modified +
IntraChainCrosslinkedResidue modified +
ExternalOntology modified +
ControlReference modified +
ProteinDrug modified +
StableIdentifierHistory modified +
MarkerReference modified +
GO_MolecularFunction modified +
Reaction modified +
PositiveRegulation modified +
FragmentInsertionModification modified +
ReviewStatus modified +
ReferenceDNASequence modified +
Cell modified +
NegativePrecedingEventReason modified +
_Deleted modified +
DatabaseObject modified +
Disease modified +
TranslationalModification modified +
CellDevelopmentStep modified +
ReferenceDatabase modified +
ReferenceGeneProduct modified +
Regulation modified +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
_Deleted replacementInstances +
Reaction created 1
PositiveRegulation created 1
FragmentInsertionModification created 1
ReviewStatus created 1
ReferenceDNASequence created 1
Cell created 1
DatabaseObject created 1
_Deleted created 1
NegativePrecedingEventReason created 1
Disease created 1
TranslationalModification created 1
CellDevelopmentStep created 1
ReferenceDatabase created 1
ReferenceGeneProduct created 1
Regulation created 1
SequenceOntology created 1
ChemicalDrug created 1
ReferenceTherapeutic created 1
GO_CellularComponent created 1
TranscriptionalModification created 1
IntraChainCrosslinkedResidue created 1
ControlReference created 1
ExternalOntology created 1
ProteinDrug created 1
StableIdentifierHistory created 1
MarkerReference created 1
GO_MolecularFunction created 1
Person created 1
FragmentModification created 1
GeneticallyModifiedResidue created 1
ReferenceMolecule created 1
Depolymerisation created 1
EvidenceType created 1
ReferenceRNASequence created 1
NegativePrecedingEvent created 1
Taxon created 1
DrugActionType created 1
NegativeGeneExpressionRegulation created 1
Polymer created 1
NegativeRegulation created 1
Affiliation created 1
DatabaseIdentifier created 1
Complex created 1
Event created 1
BlackBoxEvent created 1
EntityWithAccessionedSequence created 1
CandidateSet created 1
FragmentDeletionModification created 1
PhysicalEntity created 1
_Release created 1
InteractionEvent created 1
CatalystActivity created 1
ReactionType created 1
_DeletedInstance created 1
URL created 1
CrosslinkedResidue created 1
ReplacedResidue created 1
RegulationReference created 1
Species created 1
ReferenceIsoform created 1
CellLineagePath created 1
Book created 1
PsiMod created 1
ReferenceGroup created 1
AbstractModifiedResidue created 1
ReferenceEntity created 1
ModifiedNucleotide created 1
StableIdentifierReleaseStatus created 1
FailedReaction created 1
GO_BiologicalProcess created 1
Requirement created 1
PhysicalEntityCellType created 1
DefinedSet created 1
FunctionalStatus created 1
FragmentReplacedModification created 1
InterChainCrosslinkedResidue created 1
EntityFunctionalStatus created 1
Compartment created 1
GenomeEncodedEntity created 1
Anatomy created 1
SimpleEntity created 1
Pathway created 1
NonsenseMutation created 1
StableIdentifier created 1
Publication created 1
RNADrug created 1
InstanceEdit created 1
Summation created 1
ReactionlikeEvent created 1
PathwayDiagram created 1
Drug created 1
FrontPage created 1
ReferenceSequence created 1
Figure created 1
OtherEntity created 1
GroupModifiedResidue created 1
CatalystActivityReference created 1
RetractionStatus created 1
PositiveGeneExpressionRegulation created 1
ControlledVocabulary created 1
Polymerisation created 1
CellType created 1
LiteratureReference created 1
EntitySet created 1
DeletedControlledVocabulary created 1
FunctionalStatusType created 1
ModifiedResidue created 1
_UpdateTracker created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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