Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CandidateSet created 1
TranscriptionalModification created 1
DeletedControlledVocabulary created 1
StableIdentifierHistory created 1
CatalystActivity created 1
Anatomy created 1
GO_CellularComponent created 1
FailedReaction created 1
ReferenceDNASequence created 1
CrosslinkedResidue created 1
Person created 1
Reaction created 1
Summation created 1
ExternalOntology created 1
ReferenceEntity created 1
EvidenceType created 1
ReferenceMolecule created 1
FragmentReplacedModification created 1
Depolymerisation created 1
DefinedSet created 1
Regulation created 1
ReferenceSequence created 1
AbstractModifiedResidue created 1
Compartment created 1
MarkerReference created 1
FunctionalStatusType created 1
DatabaseObject created 1
ReferenceRNASequence created 1
TranslationalModification created 1
SequenceOntology created 1
Requirement created 1
_DeletedInstance created 1
ModifiedNucleotide created 1
GO_BiologicalProcess created 1
PositiveGeneExpressionRegulation created 1
RegulationReference created 1
Affiliation created 1
ReactionlikeEvent created 1
ReferenceIsoform created 1
StableIdentifierReleaseStatus created 1
ReplacedResidue created 1
URL created 1
LiteratureReference created 1
PathwayDiagram created 1
ReferenceGeneProduct created 1
Polymer created 1
EntitySet created 1
FragmentDeletionModification created 1
Pathway created 1
DatabaseIdentifier created 1
FunctionalStatus created 1
PhysicalEntityCellType created 1
GO_MolecularFunction created 1
ReferenceDatabase created 1
BlackBoxEvent created 1
_Release created 1
GenomeEncodedEntity created 1
RNADrug created 1
PsiMod created 1
ReviewStatus created 1
FragmentInsertionModification created 1
ProteinDrug created 1
ModifiedResidue created 1
NegativePrecedingEventReason created 1
Cell created 1
_Deleted created 1
SimpleEntity created 1
GroupModifiedResidue created 1
InstanceEdit created 1
CatalystActivityReference created 1
IntraChainCrosslinkedResidue created 1
InterChainCrosslinkedResidue created 1
Figure created 1
NegativeGeneExpressionRegulation created 1
NegativeRegulation created 1
NonsenseMutation created 1
StableIdentifier created 1
ControlReference created 1
InteractionEvent created 1
CellDevelopmentStep created 1
NegativePrecedingEvent created 1
Disease created 1
EntityWithAccessionedSequence created 1
GeneticallyModifiedResidue created 1
RetractionStatus created 1
FragmentModification created 1
ReferenceTherapeutic created 1
DrugActionType created 1
_UpdateTracker created 1
OtherEntity created 1
Publication created 1
ControlledVocabulary created 1
ReactionType created 1
Species created 1
Event created 1
PhysicalEntity created 1
FrontPage created 1
ChemicalDrug created 1
CellType created 1
Drug created 1
Book created 1
Taxon created 1
Complex created 1
PositiveRegulation created 1
CellLineagePath created 1
Polymerisation created 1
ReferenceGroup created 1
EntityFunctionalStatus created 1
ProteinDrug revised +
ReactionlikeEvent revised +
FailedReaction revised +
CandidateSet revised +
EntityWithAccessionedSequence revised +
Polymer revised +
OtherEntity revised +
EntitySet revised +
Pathway revised +
Event revised +
Cell revised +
SimpleEntity revised +
Reaction revised +
DefinedSet revised +
ChemicalDrug revised +
Drug revised +
PhysicalEntity revised +
Depolymerisation revised +
Polymerisation revised +
GenomeEncodedEntity revised +
RNADrug revised +
Complex revised +
BlackBoxEvent revised +
CellLineagePath revised +
CellDevelopmentStep revised +
InteractionEvent revised +
_Deleted replacementInstances +
Polymerisation structureModified +
Event structureModified +
Pathway structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
Depolymerisation edited +
PhysicalEntity edited +
DefinedSet edited +
ChemicalDrug edited +
Drug edited +
Complex edited +
BlackBoxEvent edited +
CellDevelopmentStep edited +
InteractionEvent edited +
CellLineagePath edited +
Polymerisation edited +
GenomeEncodedEntity edited +
RNADrug edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
ProteinDrug edited +
ReactionlikeEvent edited +
FailedReaction edited +
Cell edited +
SimpleEntity edited +
Reaction edited +
OtherEntity edited +
Polymer edited +
EntitySet edited +
Pathway edited +
Event edited +
ReferenceMolecule modified +
EvidenceType modified +
Depolymerisation modified +
FragmentReplacedModification modified +
DefinedSet modified +
ReferenceSequence modified +
Regulation modified +
AbstractModifiedResidue modified +
Compartment modified +
MarkerReference modified +
FunctionalStatusType modified +
DatabaseObject modified +
TranslationalModification modified +
SequenceOntology modified +
ReferenceRNASequence modified +
Requirement modified +
_DeletedInstance modified +
CandidateSet modified +
TranscriptionalModification modified +
DeletedControlledVocabulary modified +
StableIdentifierHistory modified +
CatalystActivity modified +
Anatomy modified +
GO_CellularComponent modified +
FailedReaction modified +
CrosslinkedResidue modified +
ReferenceDNASequence modified +
Person modified +
Reaction modified +
Summation modified +
ReferenceEntity modified +
ExternalOntology modified +
DatabaseIdentifier modified +
FunctionalStatus modified +
PhysicalEntityCellType modified +
GO_MolecularFunction modified +
ReferenceDatabase modified +
BlackBoxEvent modified +
_Release modified +
GenomeEncodedEntity modified +
PsiMod modified +
RNADrug modified +
GO_BiologicalProcess modified +
ModifiedNucleotide modified +
PositiveGeneExpressionRegulation modified +
Affiliation modified +
RegulationReference modified +
ReactionlikeEvent modified +
StableIdentifierReleaseStatus modified +
ReferenceIsoform modified +
ReplacedResidue modified +
PathwayDiagram modified +
URL modified +
LiteratureReference modified +
Polymer modified +
ReferenceGeneProduct modified +
EntitySet modified +
FragmentDeletionModification modified +
Pathway modified +
NegativeGeneExpressionRegulation modified +
NonsenseMutation modified +
NegativeRegulation modified +
StableIdentifier modified +
ControlReference modified +
CellDevelopmentStep modified +
InteractionEvent modified +
NegativePrecedingEvent modified +
ReviewStatus modified +
FragmentInsertionModification modified +
ProteinDrug modified +
ModifiedResidue modified +
NegativePrecedingEventReason modified +
Cell modified +
SimpleEntity modified +
GroupModifiedResidue modified +
_Deleted modified +
InstanceEdit modified +
CatalystActivityReference modified +
IntraChainCrosslinkedResidue modified +
InterChainCrosslinkedResidue modified +
Figure modified +
PhysicalEntity modified +
FrontPage modified +
ChemicalDrug modified +
CellType modified +
Book modified +
Drug modified +
Taxon modified +
Complex modified +
PositiveRegulation modified +
CellLineagePath modified +
Polymerisation modified +
ReferenceGroup modified +
EntityFunctionalStatus modified +
Disease modified +
EntityWithAccessionedSequence modified +
GeneticallyModifiedResidue modified +
RetractionStatus modified +
FragmentModification modified +
ReferenceTherapeutic modified +
_UpdateTracker modified +
DrugActionType modified +
OtherEntity modified +
Publication modified +
ReactionType modified +
ControlledVocabulary modified +
Species modified +
Event modified +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
InteractionEvent reviewed +
CellLineagePath reviewed +
BlackBoxEvent reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
Depolymerisation reviewed +
ChemicalDrug reviewed +
DefinedSet reviewed +
Drug reviewed +
SimpleEntity reviewed +
Cell reviewed +
Reaction reviewed +
EntitySet reviewed +
Polymer reviewed +
OtherEntity reviewed +
Event reviewed +
Pathway reviewed +
CandidateSet reviewed +
EntityWithAccessionedSequence reviewed +
ReactionlikeEvent reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
Reaction authored +
Cell authored 1
SimpleEntity authored 1
Pathway authored +
Event authored +
OtherEntity authored 1
Polymer authored 1
EntitySet authored 1
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
ProteinDrug authored 1
ReactionlikeEvent authored +
FailedReaction authored +
BlackBoxEvent authored +
CellLineagePath authored +
CellDevelopmentStep authored +
InteractionEvent authored +
Complex authored 1
RNADrug authored 1
Polymerisation authored +
GenomeEncodedEntity authored 1
Depolymerisation authored +
PhysicalEntity authored 1
Drug authored 1
DefinedSet authored 1
ChemicalDrug authored 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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