Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CatalystActivityReference modified +
ReferenceSequence modified +
ReactionlikeEvent modified +
EntityFunctionalStatus modified +
ReferenceGroup modified +
Affiliation modified +
NegativeRegulation modified +
LiteratureReference modified +
URL modified +
_Release modified +
GroupModifiedResidue modified +
ReplacedResidue modified +
ModifiedNucleotide modified +
InstanceEdit modified +
ReferenceIsoform modified +
FailedReaction modified +
_Deleted modified +
DatabaseObject modified +
CellDevelopmentStep modified +
ChemicalDrug modified +
GO_BiologicalProcess modified +
CatalystActivity modified +
Taxon modified +
CellType modified +
RegulationReference modified +
Event modified +
ExternalOntology modified +
NegativePrecedingEventReason modified +
Pathway modified +
CandidateSet modified +
EntityWithAccessionedSequence modified +
ControlReference modified +
FrontPage modified +
GO_MolecularFunction modified +
Person modified +
ReferenceDatabase modified +
Depolymerisation modified +
Anatomy modified +
EntitySet modified +
PositiveGeneExpressionRegulation modified +
DrugActionType modified +
IntraChainCrosslinkedResidue modified +
EvidenceType modified +
FragmentModification modified +
ControlledVocabulary modified +
FunctionalStatusType modified +
Drug modified +
Figure modified +
RetractionStatus modified +
StableIdentifierHistory modified +
NonsenseMutation modified +
Complex modified +
DatabaseIdentifier modified +
TranslationalModification modified +
GenomeEncodedEntity modified +
PsiMod modified +
ProteinDrug modified +
Summation modified +
ReviewStatus modified +
PhysicalEntityCellType modified +
CellLineagePath modified +
FragmentInsertionModification modified +
DefinedSet modified +
FunctionalStatus modified +
Regulation modified +
ReferenceMolecule modified +
InterChainCrosslinkedResidue modified +
StableIdentifier modified +
Book modified +
ReactionType modified +
ModifiedResidue modified +
ReferenceTherapeutic modified +
Reaction modified +
ReferenceGeneProduct modified +
ReferenceDNASequence modified +
Species modified +
PhysicalEntity modified +
GeneticallyModifiedResidue modified +
CrosslinkedResidue modified +
DeletedControlledVocabulary modified +
FragmentReplacedModification modified +
Publication modified +
ReferenceRNASequence modified +
Cell modified +
Compartment modified +
MarkerReference modified +
TranscriptionalModification modified +
PositiveRegulation modified +
InteractionEvent modified +
OtherEntity modified +
NegativePrecedingEvent modified +
Disease modified +
Requirement modified +
RNADrug modified +
ReferenceEntity modified +
GO_CellularComponent modified +
SimpleEntity modified +
Polymer modified +
FragmentDeletionModification modified +
Polymerisation modified +
NegativeGeneExpressionRegulation modified +
_UpdateTracker modified +
PathwayDiagram modified +
BlackBoxEvent modified +
StableIdentifierReleaseStatus modified +
AbstractModifiedResidue modified +
SequenceOntology modified +
_DeletedInstance modified +
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Complex reviewed +
PhysicalEntity reviewed +
Event reviewed +
Reaction reviewed +
Drug reviewed +
BlackBoxEvent reviewed +
Polymerisation reviewed +
CellDevelopmentStep reviewed +
ChemicalDrug reviewed +
SimpleEntity reviewed +
Polymer reviewed +
RNADrug reviewed +
EntitySet reviewed +
FailedReaction reviewed +
InteractionEvent reviewed +
DefinedSet reviewed +
CellLineagePath reviewed +
OtherEntity reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
Cell reviewed +
Pathway reviewed +
GenomeEncodedEntity reviewed +
ProteinDrug reviewed +
CandidateSet reviewed +
EntityWithAccessionedSequence reviewed +
Polymerisation authored +
SimpleEntity authored 1
Polymer authored 1
ChemicalDrug authored 1
CellDevelopmentStep authored +
PhysicalEntity authored 1
Event authored +
Complex authored 1
BlackBoxEvent authored +
Reaction authored +
Drug authored 1
Cell authored 1
ReactionlikeEvent authored +
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
ProteinDrug authored 1
Pathway authored +
GenomeEncodedEntity authored 1
FailedReaction authored +
EntitySet authored 1
RNADrug authored 1
Depolymerisation authored +
OtherEntity authored 1
InteractionEvent authored +
CellLineagePath authored +
DefinedSet authored 1
Polymerisation structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Event structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
Reaction revised +
Drug revised +
BlackBoxEvent revised +
Complex revised +
Event revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
ChemicalDrug revised +
SimpleEntity revised +
Polymer revised +
Polymerisation revised +
InteractionEvent revised +
CellLineagePath revised +
DefinedSet revised +
OtherEntity revised +
Depolymerisation revised +
EntitySet revised +
RNADrug revised +
FailedReaction revised +
Pathway revised +
GenomeEncodedEntity revised +
CandidateSet revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
ReactionlikeEvent revised +
Cell revised +
BlackBoxEvent edited +
Reaction edited +
Drug edited +
Complex edited +
Event edited +
PhysicalEntity edited +
SimpleEntity edited +
Polymer edited +
CellDevelopmentStep edited +
ChemicalDrug edited +
Polymerisation edited +
Depolymerisation edited +
DefinedSet edited +
InteractionEvent edited +
CellLineagePath edited +
OtherEntity edited +
FailedReaction edited +
RNADrug edited +
EntitySet edited +
ProteinDrug edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
Pathway edited +
GenomeEncodedEntity edited +
Cell edited +
ReactionlikeEvent edited +
CatalystActivity created 1
ChemicalDrug created 1
GO_BiologicalProcess created 1
DatabaseObject created 1
CellDevelopmentStep created 1
CellType created 1
Taxon created 1
ExternalOntology created 1
Event created 1
RegulationReference created 1
ReferenceSequence created 1
CatalystActivityReference created 1
_Release created 1
URL created 1
GroupModifiedResidue created 1
NegativeRegulation created 1
Affiliation created 1
LiteratureReference created 1
ReferenceGroup created 1
ReactionlikeEvent created 1
EntityFunctionalStatus created 1
ReplacedResidue created 1
FailedReaction created 1
_Deleted created 1
ReferenceIsoform created 1
ModifiedNucleotide created 1
InstanceEdit created 1
EvidenceType created 1
IntraChainCrosslinkedResidue created 1
ControlledVocabulary created 1
FunctionalStatusType created 1
FragmentModification created 1
StableIdentifierHistory created 1
RetractionStatus created 1
Figure created 1
Drug created 1
TranslationalModification created 1
DatabaseIdentifier created 1
Complex created 1
NonsenseMutation created 1
EntityWithAccessionedSequence created 1
CandidateSet created 1
Pathway created 1
NegativePrecedingEventReason created 1
GO_MolecularFunction created 1
FrontPage created 1
ControlReference created 1
Depolymerisation created 1
ReferenceDatabase created 1
Person created 1
PositiveGeneExpressionRegulation created 1
DrugActionType created 1
Anatomy created 1
EntitySet created 1
ReferenceTherapeutic created 1
ModifiedResidue created 1
ReactionType created 1
Book created 1
Species created 1
ReferenceDNASequence created 1
ReferenceGeneProduct created 1
Reaction created 1
CrosslinkedResidue created 1
GeneticallyModifiedResidue created 1
PhysicalEntity created 1
Summation created 1
ProteinDrug created 1
PsiMod created 1
GenomeEncodedEntity created 1
ReviewStatus created 1
PhysicalEntityCellType created 1
ReferenceMolecule created 1
Regulation created 1
FunctionalStatus created 1
DefinedSet created 1
FragmentInsertionModification created 1
CellLineagePath created 1
StableIdentifier created 1
InterChainCrosslinkedResidue created 1
SimpleEntity created 1
Polymer created 1
GO_CellularComponent created 1
NegativeGeneExpressionRegulation created 1
Polymerisation created 1
FragmentDeletionModification created 1
_UpdateTracker created 1
BlackBoxEvent created 1
PathwayDiagram created 1
_DeletedInstance created 1
SequenceOntology created 1
StableIdentifierReleaseStatus created 1
AbstractModifiedResidue created 1
FragmentReplacedModification created 1
DeletedControlledVocabulary created 1
Compartment created 1
ReferenceRNASequence created 1
Cell created 1
Publication created 1
Disease created 1
Requirement created 1
NegativePrecedingEvent created 1
OtherEntity created 1
PositiveRegulation created 1
TranscriptionalModification created 1
MarkerReference created 1
InteractionEvent created 1
ReferenceEntity created 1
RNADrug created 1
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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