Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
FailedReaction reviewed +
Pathway reviewed +
EntitySet reviewed +
Polymer reviewed +
BlackBoxEvent reviewed +
SimpleEntity reviewed +
CandidateSet reviewed +
CellLineagePath reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
Cell reviewed +
Event reviewed +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
DefinedSet reviewed +
RNADrug reviewed +
Polymerisation reviewed +
Complex reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
Depolymerisation reviewed +
Depolymerisation revised +
ProteinDrug revised +
CellDevelopmentStep revised +
Drug revised +
ReactionlikeEvent revised +
Polymerisation revised +
Complex revised +
DefinedSet revised +
RNADrug revised +
GenomeEncodedEntity revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
Event revised +
Cell revised +
ChemicalDrug revised +
Reaction revised +
InteractionEvent revised +
PhysicalEntity revised +
CellLineagePath revised +
CandidateSet revised +
SimpleEntity revised +
BlackBoxEvent revised +
Polymer revised +
EntitySet revised +
Pathway revised +
FailedReaction revised +
Depolymerisation structureModified +
Reaction structureModified +
InteractionEvent structureModified +
Event structureModified +
Pathway structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
_Deleted replacementInstances +
Event internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation edited +
Complex edited +
CellDevelopmentStep edited +
Drug edited +
ReactionlikeEvent edited +
GenomeEncodedEntity edited +
OtherEntity edited +
RNADrug edited +
DefinedSet edited +
Depolymerisation edited +
ProteinDrug edited +
SimpleEntity edited +
BlackBoxEvent edited +
CellLineagePath edited +
CandidateSet edited +
Polymer edited +
EntitySet edited +
Pathway edited +
FailedReaction edited +
EntityWithAccessionedSequence edited +
Event edited +
Cell edited +
ChemicalDrug edited +
Reaction edited +
InteractionEvent edited +
PhysicalEntity edited +
SequenceOntology modified +
ControlReference modified +
PhysicalEntity modified +
ModifiedNucleotide modified +
PhysicalEntityCellType modified +
CrosslinkedResidue modified +
InterChainCrosslinkedResidue modified +
RegulationReference modified +
CellType modified +
_Deleted modified +
ReferenceSequence modified +
StableIdentifierHistory modified +
_Release modified +
FragmentReplacedModification modified +
Regulation modified +
ReferenceRNASequence modified +
SimpleEntity modified +
DeletedControlledVocabulary modified +
StableIdentifier modified +
URL modified +
DatabaseObject modified +
ModifiedResidue modified +
InstanceEdit modified +
FunctionalStatusType modified +
DefinedSet modified +
ReferenceGeneProduct modified +
Requirement modified +
FragmentDeletionModification modified +
CellDevelopmentStep modified +
Complex modified +
_UpdateTracker modified +
TranslationalModification modified +
Cell modified +
NonsenseMutation modified +
Disease modified +
InteractionEvent modified +
FunctionalStatus modified +
PositiveRegulation modified +
ReplacedResidue modified +
TranscriptionalModification modified +
Anatomy modified +
NegativePrecedingEvent modified +
Pathway modified +
NegativePrecedingEventReason modified +
CellLineagePath modified +
_DeletedInstance modified +
AbstractModifiedResidue modified +
LiteratureReference modified +
PsiMod modified +
Publication modified +
ProteinDrug modified +
Affiliation modified +
StableIdentifierReleaseStatus modified +
CatalystActivity modified +
ReferenceGroup modified +
EvidenceType modified +
ReferenceMolecule modified +
RNADrug modified +
GeneticallyModifiedResidue modified +
ReferenceDatabase modified +
ReactionlikeEvent modified +
Summation modified +
PositiveGeneExpressionRegulation modified +
ReferenceTherapeutic modified +
ReviewStatus modified +
RetractionStatus modified +
GO_BiologicalProcess modified +
ChemicalDrug modified +
Book modified +
CatalystActivityReference modified +
NegativeGeneExpressionRegulation modified +
ExternalOntology modified +
ReferenceDNASequence modified +
FailedReaction modified +
EntityFunctionalStatus modified +
CandidateSet modified +
Figure modified +
ReferenceEntity modified +
DrugActionType modified +
GO_CellularComponent modified +
Compartment modified +
Depolymerisation modified +
Person modified +
MarkerReference modified +
Taxon modified +
Drug modified +
Polymerisation modified +
GroupModifiedResidue modified +
EntityWithAccessionedSequence modified +
Event modified +
FrontPage modified +
Reaction modified +
NegativeRegulation modified +
FragmentInsertionModification modified +
GO_MolecularFunction modified +
EntitySet modified +
Polymer modified +
DatabaseIdentifier modified +
PathwayDiagram modified +
BlackBoxEvent modified +
ReferenceIsoform modified +
ControlledVocabulary modified +
FragmentModification modified +
ReactionType modified +
GenomeEncodedEntity modified +
OtherEntity modified +
Species modified +
IntraChainCrosslinkedResidue modified +
URL created 1
DatabaseObject created 1
ModifiedResidue created 1
ReferenceGeneProduct created 1
Requirement created 1
FunctionalStatusType created 1
InstanceEdit created 1
DefinedSet created 1
_UpdateTracker created 1
Complex created 1
FragmentDeletionModification created 1
CellDevelopmentStep created 1
CrosslinkedResidue created 1
InterChainCrosslinkedResidue created 1
CellType created 1
RegulationReference created 1
PhysicalEntity created 1
ModifiedNucleotide created 1
SequenceOntology created 1
ControlReference created 1
PhysicalEntityCellType created 1
FragmentReplacedModification created 1
_Deleted created 1
_Release created 1
StableIdentifierHistory created 1
ReferenceSequence created 1
SimpleEntity created 1
DeletedControlledVocabulary created 1
StableIdentifier created 1
ReferenceRNASequence created 1
Regulation created 1
Affiliation created 1
ProteinDrug created 1
Publication created 1
ReferenceGroup created 1
CatalystActivity created 1
EvidenceType created 1
ReferenceMolecule created 1
StableIdentifierReleaseStatus created 1
GeneticallyModifiedResidue created 1
RNADrug created 1
Summation created 1
ReferenceDatabase created 1
ReactionlikeEvent created 1
TranslationalModification created 1
PositiveRegulation created 1
FunctionalStatus created 1
NonsenseMutation created 1
Cell created 1
Disease created 1
InteractionEvent created 1
Pathway created 1
ReplacedResidue created 1
TranscriptionalModification created 1
Anatomy created 1
NegativePrecedingEvent created 1
LiteratureReference created 1
PsiMod created 1
NegativePrecedingEventReason created 1
CellLineagePath created 1
AbstractModifiedResidue created 1
_DeletedInstance created 1
DrugActionType created 1
ReferenceEntity created 1
GO_CellularComponent created 1
Depolymerisation created 1
Compartment created 1
Person created 1
Taxon created 1
MarkerReference created 1
Polymerisation created 1
GroupModifiedResidue created 1
Drug created 1
ReviewStatus created 1
RetractionStatus created 1
ReferenceTherapeutic created 1
PositiveGeneExpressionRegulation created 1
GO_BiologicalProcess created 1
ChemicalDrug created 1
ReferenceDNASequence created 1
FailedReaction created 1
EntityFunctionalStatus created 1
Book created 1
NegativeGeneExpressionRegulation created 1
CatalystActivityReference created 1
ExternalOntology created 1
Figure created 1
CandidateSet created 1
ReactionType created 1
GenomeEncodedEntity created 1
OtherEntity created 1
FragmentModification created 1
Species created 1
IntraChainCrosslinkedResidue created 1
FragmentInsertionModification created 1
NegativeRegulation created 1
GO_MolecularFunction created 1
EntityWithAccessionedSequence created 1
FrontPage created 1
Event created 1
Reaction created 1
EntitySet created 1
Polymer created 1
DatabaseIdentifier created 1
ReferenceIsoform created 1
BlackBoxEvent created 1
ControlledVocabulary created 1
PathwayDiagram created 1
FailedReaction authored +
Pathway authored +
Polymer authored 1
EntitySet authored 1
CellLineagePath authored +
CandidateSet authored 1
BlackBoxEvent authored +
SimpleEntity authored 1
PhysicalEntity authored 1
InteractionEvent authored +
Reaction authored +
ChemicalDrug authored 1
Event authored +
EntityWithAccessionedSequence authored 1
Cell authored 1
RNADrug authored 1
DefinedSet authored 1
OtherEntity authored 1
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
Drug authored 1
CellDevelopmentStep authored +
Complex authored 1
Polymerisation authored +
ProteinDrug authored 1
Depolymerisation authored +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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