Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
EntityWithAccessionedSequence edited +
ChemicalDrug edited +
ProteinDrug edited +
CandidateSet edited +
BlackBoxEvent edited +
Pathway edited +
DefinedSet edited +
Depolymerisation edited +
Event edited +
Reaction edited +
Polymerisation edited +
Complex edited +
SimpleEntity edited +
Cell edited +
EntitySet edited +
RNADrug edited +
FailedReaction edited +
Drug edited +
Polymer edited +
PhysicalEntity edited +
InteractionEvent edited +
CellDevelopmentStep edited +
ReactionlikeEvent edited +
GenomeEncodedEntity edited +
CellLineagePath edited +
OtherEntity edited +
CandidateSet reviewed +
BlackBoxEvent reviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
Reaction reviewed +
Event reviewed +
Pathway reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
PhysicalEntity reviewed +
CellDevelopmentStep reviewed +
InteractionEvent reviewed +
Drug reviewed +
Polymer reviewed +
EntitySet reviewed +
Cell reviewed +
FailedReaction reviewed +
RNADrug reviewed +
Polymerisation reviewed +
Complex reviewed +
SimpleEntity reviewed +
GenomeEncodedEntity reviewed +
CellLineagePath reviewed +
OtherEntity reviewed +
ReactionlikeEvent reviewed +
FragmentDeletionModification created 1
Compartment created 1
PositiveRegulation created 1
PathwayDiagram created 1
ControlReference created 1
_Release created 1
GO_CellularComponent created 1
Affiliation created 1
FragmentReplacedModification created 1
PhysicalEntityCellType created 1
Complex created 1
Species created 1
Cell created 1
GroupModifiedResidue created 1
ControlledVocabulary created 1
PhysicalEntity created 1
StableIdentifierHistory created 1
CellDevelopmentStep created 1
CatalystActivity created 1
URL created 1
FragmentModification created 1
DefinedSet created 1
_DeletedInstance created 1
Event created 1
ModifiedNucleotide created 1
NegativePrecedingEvent created 1
CrosslinkedResidue created 1
ReviewStatus created 1
CandidateSet created 1
InstanceEdit created 1
CellType created 1
ReferenceSequence created 1
Taxon created 1
OtherEntity created 1
GenomeEncodedEntity created 1
ReferenceIsoform created 1
MarkerReference created 1
Book created 1
SimpleEntity created 1
EntitySet created 1
Figure created 1
FailedReaction created 1
Drug created 1
_Deleted created 1
InteractionEvent created 1
FunctionalStatusType created 1
DrugActionType created 1
ReferenceGroup created 1
_UpdateTracker created 1
EntityWithAccessionedSequence created 1
Regulation created 1
ProteinDrug created 1
ReactionType created 1
ReferenceDNASequence created 1
ReferenceEntity created 1
FunctionalStatus created 1
CellLineagePath created 1
EntityFunctionalStatus created 1
IntraChainCrosslinkedResidue created 1
GO_BiologicalProcess created 1
RNADrug created 1
NonsenseMutation created 1
AbstractModifiedResidue created 1
DeletedControlledVocabulary created 1
TranslationalModification created 1
TranscriptionalModification created 1
ReferenceRNASequence created 1
Requirement created 1
ReplacedResidue created 1
Pathway created 1
Disease created 1
Reaction created 1
ReferenceGeneProduct created 1
PositiveGeneExpressionRegulation created 1
NegativePrecedingEventReason created 1
NegativeRegulation created 1
DatabaseIdentifier created 1
RegulationReference created 1
ReactionlikeEvent created 1
StableIdentifierReleaseStatus created 1
SequenceOntology created 1
Polymerisation created 1
ReferenceMolecule created 1
Polymer created 1
LiteratureReference created 1
ReferenceTherapeutic created 1
NegativeGeneExpressionRegulation created 1
CatalystActivityReference created 1
Summation created 1
ModifiedResidue created 1
FragmentInsertionModification created 1
ExternalOntology created 1
DatabaseObject created 1
Depolymerisation created 1
InterChainCrosslinkedResidue created 1
Person created 1
Publication created 1
StableIdentifier created 1
FrontPage created 1
ReferenceDatabase created 1
Anatomy created 1
ChemicalDrug created 1
GeneticallyModifiedResidue created 1
EvidenceType created 1
PsiMod created 1
GO_MolecularFunction created 1
RetractionStatus created 1
BlackBoxEvent created 1
ReactionlikeEvent authored +
GenomeEncodedEntity authored 1
CellLineagePath authored +
OtherEntity authored 1
RNADrug authored 1
FailedReaction authored +
EntitySet authored 1
Cell authored 1
SimpleEntity authored 1
Polymerisation authored +
Complex authored 1
CellDevelopmentStep authored +
InteractionEvent authored +
PhysicalEntity authored 1
Drug authored 1
Polymer authored 1
Reaction authored +
Event authored +
Depolymerisation authored +
Pathway authored +
DefinedSet authored 1
ChemicalDrug authored 1
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
CandidateSet authored 1
ProteinDrug authored 1
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Depolymerisation structureModified +
Reaction structureModified +
Event structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
GenomeEncodedEntity revised +
CellLineagePath revised +
OtherEntity revised +
ReactionlikeEvent revised +
Drug revised +
Polymer revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
InteractionEvent revised +
Polymerisation revised +
Complex revised +
SimpleEntity revised +
Cell revised +
EntitySet revised +
FailedReaction revised +
RNADrug revised +
DefinedSet revised +
Pathway revised +
Depolymerisation revised +
Reaction revised +
Event revised +
ProteinDrug revised +
CandidateSet revised +
BlackBoxEvent revised +
EntityWithAccessionedSequence revised +
ChemicalDrug revised +
TranscriptionalModification modified +
Requirement modified +
ReferenceRNASequence modified +
Disease modified +
ReplacedResidue modified +
Pathway modified +
Reaction modified +
ReferenceGeneProduct modified +
PositiveGeneExpressionRegulation modified +
NegativePrecedingEventReason modified +
ReferenceEntity modified +
FunctionalStatus modified +
CellLineagePath modified +
EntityFunctionalStatus modified +
GO_BiologicalProcess modified +
NonsenseMutation modified +
RNADrug modified +
IntraChainCrosslinkedResidue modified +
AbstractModifiedResidue modified +
DeletedControlledVocabulary modified +
TranslationalModification modified +
Summation modified +
CatalystActivityReference modified +
ModifiedResidue modified +
ExternalOntology modified +
FragmentInsertionModification modified +
Depolymerisation modified +
InterChainCrosslinkedResidue modified +
DatabaseObject modified +
Publication modified +
Person modified +
ReferenceDatabase modified +
StableIdentifier modified +
FrontPage modified +
Anatomy modified +
ChemicalDrug modified +
EvidenceType modified +
GeneticallyModifiedResidue modified +
GO_MolecularFunction modified +
RetractionStatus modified +
BlackBoxEvent modified +
PsiMod modified +
DatabaseIdentifier modified +
NegativeRegulation modified +
ReactionlikeEvent modified +
RegulationReference modified +
SequenceOntology modified +
StableIdentifierReleaseStatus modified +
Polymerisation modified +
ReferenceMolecule modified +
Polymer modified +
LiteratureReference modified +
ReferenceTherapeutic modified +
NegativeGeneExpressionRegulation modified +
FragmentModification modified +
URL modified +
CatalystActivity modified +
_DeletedInstance modified +
DefinedSet modified +
ModifiedNucleotide modified +
Event modified +
NegativePrecedingEvent modified +
ReviewStatus modified +
CrosslinkedResidue modified +
CellType modified +
InstanceEdit modified +
CandidateSet modified +
FragmentDeletionModification modified +
Compartment modified +
PositiveRegulation modified +
PathwayDiagram modified +
GO_CellularComponent modified +
ControlReference modified +
_Release modified +
PhysicalEntityCellType modified +
Affiliation modified +
FragmentReplacedModification modified +
Complex modified +
Cell modified +
Species modified +
ControlledVocabulary modified +
GroupModifiedResidue modified +
StableIdentifierHistory modified +
CellDevelopmentStep modified +
PhysicalEntity modified +
DrugActionType modified +
FunctionalStatusType modified +
ReferenceGroup modified +
_UpdateTracker modified +
EntityWithAccessionedSequence modified +
Regulation modified +
ReactionType modified +
ProteinDrug modified +
ReferenceDNASequence modified +
Taxon modified +
ReferenceSequence modified +
OtherEntity modified +
GenomeEncodedEntity modified +
Book modified +
ReferenceIsoform modified +
MarkerReference modified +
SimpleEntity modified +
FailedReaction modified +
EntitySet modified +
Figure modified +
Drug modified +
InteractionEvent modified +
_Deleted modified +
Reaction internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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