Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Event edited +
Pathway edited +
FailedReaction edited +
EntitySet edited +
Depolymerisation edited +
Polymer edited +
SimpleEntity edited +
CandidateSet edited +
CellDevelopmentStep edited +
PhysicalEntity edited +
ChemicalDrug edited +
Complex edited +
ReactionlikeEvent edited +
Cell edited +
Drug edited +
RNADrug edited +
CellLineagePath edited +
BlackBoxEvent edited +
Polymerisation edited +
OtherEntity edited +
GenomeEncodedEntity edited +
ProteinDrug edited +
DefinedSet edited +
EntityWithAccessionedSequence edited +
InteractionEvent edited +
Reaction edited +
BlackBoxEvent modified +
ControlReference modified +
CellLineagePath modified +
DrugActionType modified +
Taxon modified +
GeneticallyModifiedResidue modified +
CellType modified +
SequenceOntology modified +
EvidenceType modified +
FragmentModification modified +
InteractionEvent modified +
AbstractModifiedResidue modified +
CatalystActivityReference modified +
_Deleted modified +
ModifiedNucleotide modified +
ReferenceEntity modified +
FunctionalStatusType modified +
LiteratureReference modified +
_DeletedInstance modified +
Book modified +
ReferenceIsoform modified +
URL modified +
ControlledVocabulary modified +
Requirement modified +
ReferenceMolecule modified +
CrosslinkedResidue modified +
IntraChainCrosslinkedResidue modified +
ReferenceGeneProduct modified +
Drug modified +
RNADrug modified +
NegativeRegulation modified +
Publication modified +
ChemicalDrug modified +
ReferenceRNASequence modified +
FragmentInsertionModification modified +
DeletedControlledVocabulary modified +
NonsenseMutation modified +
Compartment modified +
EntityWithAccessionedSequence modified +
PhysicalEntityCellType modified +
Event modified +
Regulation modified +
SimpleEntity modified +
TranslationalModification modified +
Figure modified +
ReviewStatus modified +
ReactionlikeEvent modified +
StableIdentifierReleaseStatus modified +
ReferenceGroup modified +
FragmentDeletionModification modified +
NegativePrecedingEventReason modified +
ReferenceDatabase modified +
OtherEntity modified +
NegativeGeneExpressionRegulation modified +
CatalystActivity modified +
DatabaseIdentifier modified +
Anatomy modified +
Reaction modified +
GroupModifiedResidue modified +
DefinedSet modified +
ReferenceDNASequence modified +
FailedReaction modified +
_Release modified +
ReplacedResidue modified +
NegativePrecedingEvent modified +
EntitySet modified +
Depolymerisation modified +
TranscriptionalModification modified +
Summation modified +
EntityFunctionalStatus modified +
Polymer modified +
Person modified +
StableIdentifier modified +
CellDevelopmentStep modified +
Disease modified +
PsiMod modified +
RetractionStatus modified +
InterChainCrosslinkedResidue modified +
GO_MolecularFunction modified +
FunctionalStatus modified +
Complex modified +
Cell modified +
_UpdateTracker modified +
ExternalOntology modified +
RegulationReference modified +
PathwayDiagram modified +
Polymerisation modified +
ProteinDrug modified +
GenomeEncodedEntity modified +
GO_BiologicalProcess modified +
InstanceEdit modified +
PositiveGeneExpressionRegulation modified +
FragmentReplacedModification modified +
ReferenceSequence modified +
Pathway modified +
Affiliation modified +
GO_CellularComponent modified +
FrontPage modified +
DatabaseObject modified +
ModifiedResidue modified +
ReferenceTherapeutic modified +
CandidateSet modified +
PositiveRegulation modified +
StableIdentifierHistory modified +
MarkerReference modified +
ReactionType modified +
PhysicalEntity modified +
Species modified +
PhysicalEntity reviewed +
CellDevelopmentStep reviewed +
SimpleEntity reviewed +
CandidateSet reviewed +
Polymer reviewed +
EntitySet reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
Pathway reviewed +
Event reviewed +
InteractionEvent reviewed +
EntityWithAccessionedSequence reviewed +
DefinedSet reviewed +
Reaction reviewed +
ProteinDrug reviewed +
GenomeEncodedEntity reviewed +
OtherEntity reviewed +
Polymerisation reviewed +
Cell reviewed +
ReactionlikeEvent reviewed +
Complex reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
RNADrug reviewed +
Drug reviewed +
CellLineagePath reviewed +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
Event structureModified +
Pathway structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
_Deleted replacementInstances +
ReactionlikeEvent authored +
Complex authored 1
Cell authored 1
ChemicalDrug authored 1
BlackBoxEvent authored +
RNADrug authored 1
Drug authored 1
CellLineagePath authored +
OtherEntity authored 1
Polymerisation authored +
ProteinDrug authored 1
GenomeEncodedEntity authored 1
EntityWithAccessionedSequence authored 1
InteractionEvent authored +
DefinedSet authored 1
Reaction authored +
FailedReaction authored +
Pathway authored +
Event authored +
Depolymerisation authored +
EntitySet authored 1
CandidateSet authored 1
SimpleEntity authored 1
Polymer authored 1
PhysicalEntity authored 1
CellDevelopmentStep authored +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
FunctionalStatusType created 1
ReferenceEntity created 1
ModifiedNucleotide created 1
_Deleted created 1
CatalystActivityReference created 1
Book created 1
ReferenceIsoform created 1
_DeletedInstance created 1
LiteratureReference created 1
ControlledVocabulary created 1
Requirement created 1
URL created 1
IntraChainCrosslinkedResidue created 1
CrosslinkedResidue created 1
ReferenceMolecule created 1
Taxon created 1
DrugActionType created 1
CellLineagePath created 1
BlackBoxEvent created 1
ControlReference created 1
SequenceOntology created 1
CellType created 1
GeneticallyModifiedResidue created 1
EvidenceType created 1
AbstractModifiedResidue created 1
InteractionEvent created 1
FragmentModification created 1
Event created 1
Regulation created 1
PhysicalEntityCellType created 1
TranslationalModification created 1
SimpleEntity created 1
ChemicalDrug created 1
NegativeRegulation created 1
Publication created 1
ReferenceRNASequence created 1
Drug created 1
RNADrug created 1
ReferenceGeneProduct created 1
FragmentInsertionModification created 1
NonsenseMutation created 1
DeletedControlledVocabulary created 1
EntityWithAccessionedSequence created 1
Compartment created 1
FailedReaction created 1
_Release created 1
ReferenceDNASequence created 1
TranscriptionalModification created 1
EntitySet created 1
NegativePrecedingEvent created 1
Depolymerisation created 1
ReplacedResidue created 1
Person created 1
EntityFunctionalStatus created 1
Polymer created 1
Summation created 1
PsiMod created 1
Disease created 1
StableIdentifier created 1
CellDevelopmentStep created 1
StableIdentifierReleaseStatus created 1
ReactionlikeEvent created 1
ReviewStatus created 1
Figure created 1
NegativeGeneExpressionRegulation created 1
OtherEntity created 1
ReferenceDatabase created 1
FragmentDeletionModification created 1
NegativePrecedingEventReason created 1
ReferenceGroup created 1
DatabaseIdentifier created 1
Anatomy created 1
CatalystActivity created 1
DefinedSet created 1
GroupModifiedResidue created 1
Reaction created 1
Pathway created 1
PositiveGeneExpressionRegulation created 1
FragmentReplacedModification created 1
ReferenceSequence created 1
ModifiedResidue created 1
DatabaseObject created 1
ReferenceTherapeutic created 1
GO_CellularComponent created 1
Affiliation created 1
FrontPage created 1
StableIdentifierHistory created 1
MarkerReference created 1
CandidateSet created 1
PositiveRegulation created 1
Species created 1
PhysicalEntity created 1
ReactionType created 1
_UpdateTracker created 1
Cell created 1
Complex created 1
FunctionalStatus created 1
InterChainCrosslinkedResidue created 1
GO_MolecularFunction created 1
RetractionStatus created 1
Polymerisation created 1
RegulationReference created 1
ExternalOntology created 1
PathwayDiagram created 1
GO_BiologicalProcess created 1
GenomeEncodedEntity created 1
ProteinDrug created 1
InstanceEdit created 1
ProteinDrug revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
DefinedSet revised +
Reaction revised +
ReactionlikeEvent revised +
Complex revised +
Cell revised +
ChemicalDrug revised +
BlackBoxEvent revised +
Drug revised +
RNADrug revised +
CellLineagePath revised +
Polymerisation revised +
OtherEntity revised +
SimpleEntity revised +
CandidateSet revised +
Polymer revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
FailedReaction revised +
Event revised +
Pathway revised +
Depolymerisation revised +
EntitySet revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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