Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Event structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
Pathway structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Reaction structureModified +
CellDevelopmentStep modified +
BlackBoxEvent modified +
InteractionEvent modified +
Event modified +
ModifiedNucleotide modified +
DeletedControlledVocabulary modified +
PhysicalEntityCellType modified +
Depolymerisation modified +
Summation modified +
GeneticallyModifiedResidue modified +
ReferenceTherapeutic modified +
NonsenseMutation modified +
DatabaseIdentifier modified +
FragmentInsertionModification modified +
LiteratureReference modified +
CatalystActivityReference modified +
FunctionalStatus modified +
ChemicalDrug modified +
DefinedSet modified +
ModifiedResidue modified +
PsiMod modified +
GenomeEncodedEntity modified +
IntraChainCrosslinkedResidue modified +
NegativePrecedingEventReason modified +
_Deleted modified +
RetractionStatus modified +
Affiliation modified +
Book modified +
StableIdentifierReleaseStatus modified +
SequenceOntology modified +
FailedReaction modified +
ReferenceDNASequence modified +
FragmentDeletionModification modified +
TranscriptionalModification modified +
AbstractModifiedResidue modified +
_UpdateTracker modified +
EntityWithAccessionedSequence modified +
EntitySet modified +
InstanceEdit modified +
StableIdentifier modified +
RNADrug modified +
SimpleEntity modified +
ReactionlikeEvent modified +
CatalystActivity modified +
Taxon modified +
PhysicalEntity modified +
GroupModifiedResidue modified +
Reaction modified +
GO_BiologicalProcess modified +
Pathway modified +
Cell modified +
MarkerReference modified +
ReferenceGeneProduct modified +
CrosslinkedResidue modified +
ReferenceMolecule modified +
NegativeRegulation modified +
FragmentReplacedModification modified +
ControlReference modified +
URL modified +
ReviewStatus modified +
Person modified +
ReferenceIsoform modified +
TranslationalModification modified +
Species modified +
NegativeGeneExpressionRegulation modified +
Disease modified +
EntityFunctionalStatus modified +
DrugActionType modified +
Anatomy modified +
PositiveGeneExpressionRegulation modified +
Polymerisation modified +
ReferenceDatabase modified +
CellType modified +
Figure modified +
OtherEntity modified +
Compartment modified +
FrontPage modified +
_Release modified +
ProteinDrug modified +
ReferenceEntity modified +
ReferenceRNASequence modified +
FunctionalStatusType modified +
InterChainCrosslinkedResidue modified +
ReactionType modified +
Regulation modified +
PathwayDiagram modified +
Polymer modified +
GO_MolecularFunction modified +
Requirement modified +
Publication modified +
FragmentModification modified +
ReferenceSequence modified +
DatabaseObject modified +
CandidateSet modified +
ReplacedResidue modified +
StableIdentifierHistory modified +
ReferenceGroup modified +
GO_CellularComponent modified +
Complex modified +
CellLineagePath modified +
PositiveRegulation modified +
ExternalOntology modified +
NegativePrecedingEvent modified +
EvidenceType modified +
ControlledVocabulary modified +
_DeletedInstance modified +
RegulationReference modified +
Drug modified +
RNADrug reviewed +
SimpleEntity reviewed +
ReactionlikeEvent reviewed +
Polymerisation reviewed +
Complex reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
CellLineagePath reviewed +
Reaction reviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
DefinedSet reviewed +
Pathway reviewed +
Drug reviewed +
GenomeEncodedEntity reviewed +
Cell reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
Polymer reviewed +
Event reviewed +
FailedReaction reviewed +
CandidateSet reviewed +
EntityWithAccessionedSequence reviewed +
Depolymerisation reviewed +
EntitySet reviewed +
CellLineagePath authored +
Reaction authored +
ProteinDrug authored 1
DefinedSet authored 1
ChemicalDrug authored 1
GenomeEncodedEntity authored 1
Drug authored 1
Pathway authored +
RNADrug authored 1
SimpleEntity authored 1
ReactionlikeEvent authored +
Polymerisation authored +
PhysicalEntity authored 1
Complex authored 1
OtherEntity authored 1
CandidateSet authored 1
FailedReaction authored +
EntityWithAccessionedSequence authored 1
Depolymerisation authored +
EntitySet authored 1
Cell authored 1
CellDevelopmentStep authored +
BlackBoxEvent authored +
InteractionEvent authored +
Polymer authored 1
Event authored +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
DrugActionType created 1
ReferenceIsoform created 1
TranslationalModification created 1
Species created 1
NegativeGeneExpressionRegulation created 1
EntityFunctionalStatus created 1
Disease created 1
URL created 1
ReviewStatus created 1
Person created 1
ControlReference created 1
FragmentReplacedModification created 1
ReferenceMolecule created 1
NegativeRegulation created 1
CrosslinkedResidue created 1
ReferenceGeneProduct created 1
Cell created 1
MarkerReference created 1
FunctionalStatusType created 1
ReferenceRNASequence created 1
ReactionType created 1
InterChainCrosslinkedResidue created 1
ProteinDrug created 1
ReferenceEntity created 1
_Release created 1
FrontPage created 1
OtherEntity created 1
Compartment created 1
CellType created 1
Figure created 1
ReferenceDatabase created 1
Polymerisation created 1
Anatomy created 1
PositiveGeneExpressionRegulation created 1
StableIdentifierHistory created 1
ReplacedResidue created 1
CandidateSet created 1
FragmentModification created 1
DatabaseObject created 1
ReferenceSequence created 1
Requirement created 1
Publication created 1
GO_MolecularFunction created 1
Polymer created 1
PathwayDiagram created 1
Regulation created 1
_DeletedInstance created 1
RegulationReference created 1
ControlledVocabulary created 1
Drug created 1
ExternalOntology created 1
NegativePrecedingEvent created 1
EvidenceType created 1
PositiveRegulation created 1
CellLineagePath created 1
Complex created 1
GO_CellularComponent created 1
ReferenceGroup created 1
Depolymerisation created 1
PhysicalEntityCellType created 1
DeletedControlledVocabulary created 1
Event created 1
ModifiedNucleotide created 1
BlackBoxEvent created 1
InteractionEvent created 1
CellDevelopmentStep created 1
PsiMod created 1
GenomeEncodedEntity created 1
ChemicalDrug created 1
DefinedSet created 1
ModifiedResidue created 1
FunctionalStatus created 1
CatalystActivityReference created 1
FragmentInsertionModification created 1
LiteratureReference created 1
DatabaseIdentifier created 1
GeneticallyModifiedResidue created 1
ReferenceTherapeutic created 1
NonsenseMutation created 1
Summation created 1
InstanceEdit created 1
EntitySet created 1
StableIdentifier created 1
EntityWithAccessionedSequence created 1
_UpdateTracker created 1
ReferenceDNASequence created 1
TranscriptionalModification created 1
FragmentDeletionModification created 1
AbstractModifiedResidue created 1
FailedReaction created 1
SequenceOntology created 1
Book created 1
StableIdentifierReleaseStatus created 1
Affiliation created 1
_Deleted created 1
NegativePrecedingEventReason created 1
RetractionStatus created 1
IntraChainCrosslinkedResidue created 1
GO_BiologicalProcess created 1
Pathway created 1
GroupModifiedResidue created 1
Reaction created 1
Taxon created 1
PhysicalEntity created 1
CatalystActivity created 1
ReactionlikeEvent created 1
RNADrug created 1
SimpleEntity created 1
_Deleted replacementInstances +
Cell revised +
CellDevelopmentStep revised +
Polymer revised +
InteractionEvent revised +
BlackBoxEvent revised +
Event revised +
FailedReaction revised +
CandidateSet revised +
Depolymerisation revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
SimpleEntity revised +
RNADrug revised +
Polymerisation revised +
ReactionlikeEvent revised +
OtherEntity revised +
Complex revised +
PhysicalEntity revised +
Reaction revised +
CellLineagePath revised +
ProteinDrug revised +
DefinedSet revised +
ChemicalDrug revised +
Pathway revised +
Drug revised +
GenomeEncodedEntity revised +
GenomeEncodedEntity edited +
Drug edited +
Pathway edited +
DefinedSet edited +
ChemicalDrug edited +
ProteinDrug edited +
CellLineagePath edited +
Reaction edited +
OtherEntity edited +
Complex edited +
PhysicalEntity edited +
ReactionlikeEvent edited +
Polymerisation edited +
RNADrug edited +
SimpleEntity edited +
EntitySet edited +
EntityWithAccessionedSequence edited +
Depolymerisation edited +
FailedReaction edited +
CandidateSet edited +
Event edited +
InteractionEvent edited +
BlackBoxEvent edited +
Polymer edited +
Cell edited +
CellDevelopmentStep edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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