Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
RNADrug edited +
EntityWithAccessionedSequence edited +
CellDevelopmentStep edited +
Depolymerisation edited +
FailedReaction edited +
BlackBoxEvent edited +
Complex edited +
Cell edited +
SimpleEntity edited +
ReactionlikeEvent edited +
Drug edited +
Polymerisation edited +
ChemicalDrug edited +
CandidateSet edited +
PhysicalEntity edited +
Polymer edited +
Pathway edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
ProteinDrug edited +
DefinedSet edited +
Event edited +
CellLineagePath edited +
EntitySet edited +
Reaction edited +
OtherEntity edited +
CatalystActivityReference created 1
ReferenceGroup created 1
FunctionalStatus created 1
ModifiedResidue created 1
ReferenceIsoform created 1
EntityFunctionalStatus created 1
ReviewStatus created 1
ProteinDrug created 1
Anatomy created 1
Event created 1
ReferenceGeneProduct created 1
ReferenceMolecule created 1
ModifiedNucleotide created 1
Affiliation created 1
InstanceEdit created 1
PositiveGeneExpressionRegulation created 1
EntityWithAccessionedSequence created 1
FragmentModification created 1
ReplacedResidue created 1
Depolymerisation created 1
GO_MolecularFunction created 1
ReferenceTherapeutic created 1
BlackBoxEvent created 1
Cell created 1
URL created 1
PositiveRegulation created 1
Species created 1
InterChainCrosslinkedResidue created 1
ReactionlikeEvent created 1
Polymerisation created 1
Drug created 1
_Release created 1
GenomeEncodedEntity created 1
FragmentDeletionModification created 1
TranslationalModification created 1
Book created 1
NegativeRegulation created 1
GO_BiologicalProcess created 1
FragmentReplacedModification created 1
ReferenceEntity created 1
NegativePrecedingEventReason created 1
PathwayDiagram created 1
DrugActionType created 1
OtherEntity created 1
ReferenceDNASequence created 1
Compartment created 1
CellDevelopmentStep created 1
_DeletedInstance created 1
NegativePrecedingEvent created 1
ExternalOntology created 1
SimpleEntity created 1
NegativeGeneExpressionRegulation created 1
GO_CellularComponent created 1
CellType created 1
Regulation created 1
Person created 1
StableIdentifierReleaseStatus created 1
Pathway created 1
Requirement created 1
IntraChainCrosslinkedResidue created 1
SequenceOntology created 1
ReferenceSequence created 1
ReferenceDatabase created 1
CatalystActivity created 1
Figure created 1
Reaction created 1
TranscriptionalModification created 1
_UpdateTracker created 1
PsiMod created 1
AbstractModifiedResidue created 1
ReactionType created 1
DatabaseIdentifier created 1
ControlledVocabulary created 1
EvidenceType created 1
FailedReaction created 1
LiteratureReference created 1
FunctionalStatusType created 1
StableIdentifier created 1
GeneticallyModifiedResidue created 1
CandidateSet created 1
ChemicalDrug created 1
Polymer created 1
DatabaseObject created 1
FrontPage created 1
ReferenceRNASequence created 1
InteractionEvent created 1
DefinedSet created 1
ControlReference created 1
NonsenseMutation created 1
FragmentInsertionModification created 1
MarkerReference created 1
Disease created 1
GroupModifiedResidue created 1
CellLineagePath created 1
EntitySet created 1
Taxon created 1
RNADrug created 1
Publication created 1
CrosslinkedResidue created 1
DeletedControlledVocabulary created 1
_Deleted created 1
RegulationReference created 1
PhysicalEntityCellType created 1
Complex created 1
StableIdentifierHistory created 1
RetractionStatus created 1
PhysicalEntity created 1
Summation created 1
_Deleted replacementInstances +
Depolymerisation reviewed +
CellDevelopmentStep reviewed +
FailedReaction reviewed +
RNADrug reviewed +
EntityWithAccessionedSequence reviewed +
Polymerisation reviewed +
Drug reviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
ReactionlikeEvent reviewed +
PhysicalEntity reviewed +
Cell reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
SimpleEntity reviewed +
DefinedSet reviewed +
ProteinDrug reviewed +
Pathway reviewed +
Polymer reviewed +
InteractionEvent reviewed +
GenomeEncodedEntity reviewed +
CellLineagePath reviewed +
OtherEntity reviewed +
Reaction reviewed +
EntitySet reviewed +
Event reviewed +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Pathway structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
Event structureModified +
BlackBoxEvent structureModified +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Event authored +
OtherEntity authored 1
EntitySet authored 1
Reaction authored +
CellLineagePath authored +
InteractionEvent authored +
GenomeEncodedEntity authored 1
Pathway authored +
Polymer authored 1
DefinedSet authored 1
ProteinDrug authored 1
SimpleEntity authored 1
Complex authored 1
Cell authored 1
BlackBoxEvent authored +
PhysicalEntity authored 1
Polymerisation authored +
Drug authored 1
ChemicalDrug authored 1
CandidateSet authored 1
ReactionlikeEvent authored +
EntityWithAccessionedSequence authored 1
RNADrug authored 1
FailedReaction authored +
Depolymerisation authored +
CellDevelopmentStep authored +
DeletedControlledVocabulary modified +
_Deleted modified +
CrosslinkedResidue modified +
RNADrug modified +
Publication modified +
PhysicalEntity modified +
Summation modified +
StableIdentifierHistory modified +
Complex modified +
RegulationReference modified +
PhysicalEntityCellType modified +
RetractionStatus modified +
ControlReference modified +
DefinedSet modified +
NonsenseMutation modified +
FrontPage modified +
DatabaseObject modified +
Polymer modified +
InteractionEvent modified +
ReferenceRNASequence modified +
CellLineagePath modified +
GroupModifiedResidue modified +
Taxon modified +
EntitySet modified +
FragmentInsertionModification modified +
MarkerReference modified +
Disease modified +
EvidenceType modified +
FailedReaction modified +
DatabaseIdentifier modified +
ReactionType modified +
ControlledVocabulary modified +
PsiMod modified +
AbstractModifiedResidue modified +
CandidateSet modified +
ChemicalDrug modified +
GeneticallyModifiedResidue modified +
FunctionalStatusType modified +
LiteratureReference modified +
StableIdentifier modified +
Pathway modified +
SequenceOntology modified +
Requirement modified +
IntraChainCrosslinkedResidue modified +
Figure modified +
TranscriptionalModification modified +
_UpdateTracker modified +
Reaction modified +
CatalystActivity modified +
ReferenceDatabase modified +
ReferenceSequence modified +
CellDevelopmentStep modified +
_DeletedInstance modified +
ReferenceDNASequence modified +
Compartment modified +
StableIdentifierReleaseStatus modified +
Person modified +
Regulation modified +
ExternalOntology modified +
NegativePrecedingEvent modified +
CellType modified +
GO_CellularComponent modified +
NegativeGeneExpressionRegulation modified +
SimpleEntity modified +
TranslationalModification modified +
FragmentDeletionModification modified +
NegativeRegulation modified +
GO_BiologicalProcess modified +
FragmentReplacedModification modified +
Book modified +
_Release modified +
GenomeEncodedEntity modified +
OtherEntity modified +
ReferenceEntity modified +
DrugActionType modified +
PathwayDiagram modified +
NegativePrecedingEventReason modified +
Depolymerisation modified +
GO_MolecularFunction modified +
ReplacedResidue modified +
ReferenceTherapeutic modified +
PositiveGeneExpressionRegulation modified +
FragmentModification modified +
EntityWithAccessionedSequence modified +
Polymerisation modified +
Drug modified +
ReactionlikeEvent modified +
InterChainCrosslinkedResidue modified +
Cell modified +
BlackBoxEvent modified +
Species modified +
URL modified +
PositiveRegulation modified +
ReferenceIsoform modified +
ModifiedResidue modified +
ReviewStatus modified +
EntityFunctionalStatus modified +
ProteinDrug modified +
CatalystActivityReference modified +
FunctionalStatus modified +
ReferenceGroup modified +
ReferenceMolecule modified +
InstanceEdit modified +
Affiliation modified +
ModifiedNucleotide modified +
Event modified +
Anatomy modified +
ReferenceGeneProduct modified +
EntityWithAccessionedSequence revised +
RNADrug revised +
FailedReaction revised +
Depolymerisation revised +
CellDevelopmentStep revised +
SimpleEntity revised +
Complex revised +
Cell revised +
BlackBoxEvent revised +
PhysicalEntity revised +
Polymerisation revised +
CandidateSet revised +
Drug revised +
ChemicalDrug revised +
ReactionlikeEvent revised +
InteractionEvent revised +
GenomeEncodedEntity revised +
Pathway revised +
Polymer revised +
DefinedSet revised +
ProteinDrug revised +
Event revised +
OtherEntity revised +
EntitySet revised +
Reaction revised +
CellLineagePath revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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