Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
DefinedSet edited +
FailedReaction edited +
GenomeEncodedEntity edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
Complex edited +
ChemicalDrug edited +
InteractionEvent edited +
Cell edited +
Polymer edited +
Event edited +
Depolymerisation edited +
Reaction edited +
Polymerisation edited +
PhysicalEntity edited +
ProteinDrug edited +
Drug edited +
BlackBoxEvent edited +
EntitySet edited +
OtherEntity edited +
CandidateSet edited +
CellDevelopmentStep edited +
ReactionlikeEvent edited +
RNADrug edited +
SimpleEntity edited +
Pathway edited +
GO_MolecularFunction created 1
ReplacedResidue created 1
FragmentDeletionModification created 1
CellDevelopmentStep created 1
ControlReference created 1
LiteratureReference created 1
PsiMod created 1
TranscriptionalModification created 1
CatalystActivity created 1
GO_BiologicalProcess created 1
Affiliation created 1
InterChainCrosslinkedResidue created 1
GeneticallyModifiedResidue created 1
GenomeEncodedEntity created 1
Figure created 1
Regulation created 1
Anatomy created 1
EvidenceType created 1
GO_CellularComponent created 1
Summation created 1
RetractionStatus created 1
StableIdentifierHistory created 1
ReferenceSequence created 1
DrugActionType created 1
PathwayDiagram created 1
FrontPage created 1
DeletedControlledVocabulary created 1
_UpdateTracker created 1
_DeletedInstance created 1
NegativePrecedingEventReason created 1
NegativeRegulation created 1
Event created 1
ReactionType created 1
MarkerReference created 1
EntityFunctionalStatus created 1
Pathway created 1
RNADrug created 1
TranslationalModification created 1
ReferenceMolecule created 1
CrosslinkedResidue created 1
ModifiedResidue created 1
InteractionEvent created 1
ReferenceEntity created 1
Disease created 1
Complex created 1
CellType created 1
ChemicalDrug created 1
FunctionalStatus created 1
BlackBoxEvent created 1
ControlledVocabulary created 1
CandidateSet created 1
SequenceOntology created 1
Depolymerisation created 1
_Deleted created 1
IntraChainCrosslinkedResidue created 1
ReviewStatus created 1
ReferenceRNASequence created 1
SimpleEntity created 1
PhysicalEntityCellType created 1
StableIdentifierReleaseStatus created 1
URL created 1
ReactionlikeEvent created 1
Taxon created 1
RegulationReference created 1
DefinedSet created 1
FragmentInsertionModification created 1
NonsenseMutation created 1
Species created 1
GroupModifiedResidue created 1
CatalystActivityReference created 1
PositiveRegulation created 1
ReferenceDatabase created 1
FragmentModification created 1
FragmentReplacedModification created 1
PositiveGeneExpressionRegulation created 1
Compartment created 1
CellLineagePath created 1
EntityWithAccessionedSequence created 1
StableIdentifier created 1
DatabaseIdentifier created 1
EntitySet created 1
OtherEntity created 1
NegativeGeneExpressionRegulation created 1
DatabaseObject created 1
ProteinDrug created 1
Drug created 1
Reaction created 1
Polymerisation created 1
NegativePrecedingEvent created 1
PhysicalEntity created 1
ReferenceGeneProduct created 1
Polymer created 1
ReferenceDNASequence created 1
_Release created 1
Requirement created 1
Book created 1
ModifiedNucleotide created 1
AbstractModifiedResidue created 1
ReferenceTherapeutic created 1
FailedReaction created 1
Person created 1
ReferenceGroup created 1
Publication created 1
FunctionalStatusType created 1
ReferenceIsoform created 1
InstanceEdit created 1
Cell created 1
ExternalOntology created 1
Pathway structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
Reaction structureModified +
Polymerisation structureModified +
Event structureModified +
GenomeEncodedEntity authored 1
FailedReaction authored +
DefinedSet authored 1
InteractionEvent authored +
Cell authored 1
ChemicalDrug authored 1
Complex authored 1
CellLineagePath authored +
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
OtherEntity authored 1
EntitySet authored 1
CellDevelopmentStep authored +
BlackBoxEvent authored +
Drug authored 1
ProteinDrug authored 1
PhysicalEntity authored 1
Reaction authored +
Polymerisation authored +
Depolymerisation authored +
Event authored +
Polymer authored 1
Pathway authored +
SimpleEntity authored 1
RNADrug authored 1
ReactionlikeEvent authored +
ProteinDrug revised +
Drug revised +
OtherEntity revised +
CandidateSet revised +
EntitySet revised +
CellDevelopmentStep revised +
BlackBoxEvent revised +
Polymer revised +
Event revised +
PhysicalEntity revised +
Polymerisation revised +
Reaction revised +
Depolymerisation revised +
Pathway revised +
SimpleEntity revised +
RNADrug revised +
ReactionlikeEvent revised +
DefinedSet revised +
GenomeEncodedEntity revised +
FailedReaction revised +
ChemicalDrug revised +
Complex revised +
InteractionEvent revised +
Cell revised +
EntityWithAccessionedSequence revised +
CellLineagePath revised +
LiteratureReference modified +
ControlReference modified +
GO_MolecularFunction modified +
ReplacedResidue modified +
CellDevelopmentStep modified +
FragmentDeletionModification modified +
GO_BiologicalProcess modified +
Affiliation modified +
CatalystActivity modified +
TranscriptionalModification modified +
PsiMod modified +
GO_CellularComponent modified +
Figure modified +
Anatomy modified +
Regulation modified +
EvidenceType modified +
InterChainCrosslinkedResidue modified +
GenomeEncodedEntity modified +
GeneticallyModifiedResidue modified +
FrontPage modified +
_UpdateTracker modified +
DeletedControlledVocabulary modified +
ReferenceSequence modified +
DrugActionType modified +
PathwayDiagram modified +
StableIdentifierHistory modified +
Summation modified +
RetractionStatus modified +
NegativeRegulation modified +
Event modified +
NegativePrecedingEventReason modified +
_DeletedInstance modified +
RNADrug modified +
ReactionType modified +
EntityFunctionalStatus modified +
MarkerReference modified +
Pathway modified +
ModifiedResidue modified +
CrosslinkedResidue modified +
ReferenceMolecule modified +
TranslationalModification modified +
FunctionalStatus modified +
Disease modified +
Complex modified +
ChemicalDrug modified +
CellType modified +
ReferenceEntity modified +
InteractionEvent modified +
ReviewStatus modified +
Depolymerisation modified +
_Deleted modified +
IntraChainCrosslinkedResidue modified +
SequenceOntology modified +
BlackBoxEvent modified +
ControlledVocabulary modified +
CandidateSet modified +
RegulationReference modified +
ReactionlikeEvent modified +
Taxon modified +
StableIdentifierReleaseStatus modified +
URL modified +
PhysicalEntityCellType modified +
SimpleEntity modified +
ReferenceRNASequence modified +
NonsenseMutation modified +
GroupModifiedResidue modified +
Species modified +
PositiveRegulation modified +
CatalystActivityReference modified +
FragmentInsertionModification modified +
DefinedSet modified +
EntityWithAccessionedSequence modified +
StableIdentifier modified +
CellLineagePath modified +
PositiveGeneExpressionRegulation modified +
Compartment modified +
ReferenceDatabase modified +
FragmentModification modified +
FragmentReplacedModification modified +
Polymer modified +
NegativePrecedingEvent modified +
Reaction modified +
Polymerisation modified +
ReferenceGeneProduct modified +
PhysicalEntity modified +
DatabaseObject modified +
ProteinDrug modified +
Drug modified +
DatabaseIdentifier modified +
NegativeGeneExpressionRegulation modified +
OtherEntity modified +
EntitySet modified +
AbstractModifiedResidue modified +
ModifiedNucleotide modified +
Requirement modified +
Book modified +
ReferenceDNASequence modified +
_Release modified +
ReferenceIsoform modified +
Publication modified +
FunctionalStatusType modified +
ReferenceGroup modified +
ReferenceTherapeutic modified +
FailedReaction modified +
Person modified +
ExternalOntology modified +
InstanceEdit modified +
Cell modified +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
RNADrug reviewed +
ReactionlikeEvent reviewed +
SimpleEntity reviewed +
Pathway reviewed +
Polymer reviewed +
Event reviewed +
Reaction reviewed +
Depolymerisation reviewed +
Polymerisation reviewed +
PhysicalEntity reviewed +
ProteinDrug reviewed +
Drug reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
OtherEntity reviewed +
EntitySet reviewed +
CandidateSet reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
Complex reviewed +
ChemicalDrug reviewed +
InteractionEvent reviewed +
Cell reviewed +
DefinedSet reviewed +
FailedReaction reviewed +
GenomeEncodedEntity reviewed +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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