Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
DefinedSet revised +
Cell revised +
PhysicalEntity revised +
Complex revised +
CellLineagePath revised +
FailedReaction revised +
EntitySet revised +
GenomeEncodedEntity revised +
OtherEntity revised +
Drug revised +
Polymerisation revised +
Pathway revised +
CellDevelopmentStep revised +
Polymer revised +
Depolymerisation revised +
SimpleEntity revised +
InteractionEvent revised +
ChemicalDrug revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
Event revised +
BlackBoxEvent revised +
CandidateSet revised +
Reaction revised +
RNADrug revised +
ReactionlikeEvent revised +
ReactionlikeEvent created 1
ModifiedNucleotide created 1
ReferenceSequence created 1
Taxon created 1
URL created 1
ReferenceGeneProduct created 1
NegativeGeneExpressionRegulation created 1
Reaction created 1
CandidateSet created 1
DatabaseObject created 1
Figure created 1
InteractionEvent created 1
StableIdentifier created 1
ChemicalDrug created 1
_Deleted created 1
Depolymerisation created 1
MarkerReference created 1
ControlledVocabulary created 1
CellLineagePath created 1
FailedReaction created 1
OtherEntity created 1
FunctionalStatus created 1
ReactionType created 1
ReferenceIsoform created 1
NegativePrecedingEvent created 1
DeletedControlledVocabulary created 1
PhysicalEntityCellType created 1
RegulationReference created 1
NegativeRegulation created 1
_DeletedInstance created 1
Requirement created 1
ReferenceEntity created 1
SequenceOntology created 1
ReferenceRNASequence created 1
InstanceEdit created 1
Anatomy created 1
CatalystActivityReference created 1
BlackBoxEvent created 1
ControlReference created 1
Event created 1
ReplacedResidue created 1
FragmentInsertionModification created 1
Regulation created 1
Polymer created 1
Compartment created 1
DrugActionType created 1
Book created 1
ExternalOntology created 1
Pathway created 1
ReferenceTherapeutic created 1
PositiveGeneExpressionRegulation created 1
Drug created 1
StableIdentifierReleaseStatus created 1
FragmentModification created 1
GeneticallyModifiedResidue created 1
AbstractModifiedResidue created 1
GO_BiologicalProcess created 1
PositiveRegulation created 1
GO_CellularComponent created 1
ReferenceMolecule created 1
Cell created 1
FragmentReplacedModification created 1
FragmentDeletionModification created 1
EntityFunctionalStatus created 1
GroupModifiedResidue created 1
ReferenceDNASequence created 1
RNADrug created 1
_UpdateTracker created 1
FrontPage created 1
ProteinDrug created 1
DatabaseIdentifier created 1
InterChainCrosslinkedResidue created 1
ModifiedResidue created 1
CellType created 1
TranscriptionalModification created 1
EvidenceType created 1
Species created 1
Publication created 1
StableIdentifierHistory created 1
ReferenceGroup created 1
CatalystActivity created 1
CrosslinkedResidue created 1
Complex created 1
DefinedSet created 1
Person created 1
PathwayDiagram created 1
FunctionalStatusType created 1
IntraChainCrosslinkedResidue created 1
NegativePrecedingEventReason created 1
Affiliation created 1
Summation created 1
EntityWithAccessionedSequence created 1
TranslationalModification created 1
NonsenseMutation created 1
Disease created 1
SimpleEntity created 1
RetractionStatus created 1
PsiMod created 1
CellDevelopmentStep created 1
ReviewStatus created 1
_Release created 1
LiteratureReference created 1
Polymerisation created 1
EntitySet created 1
GenomeEncodedEntity created 1
GO_MolecularFunction created 1
ReferenceDatabase created 1
PhysicalEntity created 1
SimpleEntity edited +
Depolymerisation edited +
Polymer edited +
ProteinDrug edited +
ChemicalDrug edited +
InteractionEvent edited +
Event edited +
EntityWithAccessionedSequence edited +
BlackBoxEvent edited +
RNADrug edited +
Reaction edited +
CandidateSet edited +
ReactionlikeEvent edited +
PhysicalEntity edited +
Cell edited +
DefinedSet edited +
Complex edited +
OtherEntity edited +
CellLineagePath edited +
GenomeEncodedEntity edited +
FailedReaction edited +
EntitySet edited +
Polymerisation edited +
Drug edited +
Pathway edited +
CellDevelopmentStep edited +
_Deleted replacementInstances +
Polymerisation reviewed +
Drug reviewed +
Pathway reviewed +
CellDevelopmentStep reviewed +
Complex reviewed +
PhysicalEntity reviewed +
Cell reviewed +
DefinedSet reviewed +
OtherEntity reviewed +
FailedReaction reviewed +
CellLineagePath reviewed +
GenomeEncodedEntity reviewed +
EntitySet reviewed +
RNADrug reviewed +
Reaction reviewed +
CandidateSet reviewed +
ReactionlikeEvent reviewed +
ChemicalDrug reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
Polymer reviewed +
BlackBoxEvent reviewed +
Event reviewed +
EntityWithAccessionedSequence reviewed +
Event structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
Reaction structureModified +
ReactionlikeEvent authored +
RNADrug authored 1
Reaction authored +
CandidateSet authored 1
BlackBoxEvent authored +
Event authored +
EntityWithAccessionedSequence authored 1
ChemicalDrug authored 1
ProteinDrug authored 1
InteractionEvent authored +
Depolymerisation authored +
SimpleEntity authored 1
Polymer authored 1
Pathway authored +
CellDevelopmentStep authored +
Polymerisation authored +
Drug authored 1
OtherEntity authored 1
FailedReaction authored +
CellLineagePath authored +
GenomeEncodedEntity authored 1
EntitySet authored 1
Complex authored 1
PhysicalEntity authored 1
Cell authored 1
DefinedSet authored 1
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
EvidenceType modified +
Species modified +
Publication modified +
InterChainCrosslinkedResidue modified +
ModifiedResidue modified +
TranscriptionalModification modified +
CellType modified +
Complex modified +
DefinedSet modified +
Person modified +
StableIdentifierHistory modified +
CatalystActivity modified +
ReferenceGroup modified +
CrosslinkedResidue modified +
ReferenceDNASequence modified +
RNADrug modified +
EntityFunctionalStatus modified +
GroupModifiedResidue modified +
FragmentDeletionModification modified +
ProteinDrug modified +
DatabaseIdentifier modified +
_UpdateTracker modified +
FrontPage modified +
_Release modified +
LiteratureReference modified +
Polymerisation modified +
PsiMod modified +
RetractionStatus modified +
CellDevelopmentStep modified +
ReviewStatus modified +
ReferenceDatabase modified +
GO_MolecularFunction modified +
PhysicalEntity modified +
GenomeEncodedEntity modified +
EntitySet modified +
NegativePrecedingEventReason modified +
Affiliation modified +
Summation modified +
FunctionalStatusType modified +
PathwayDiagram modified +
IntraChainCrosslinkedResidue modified +
NonsenseMutation modified +
Disease modified +
SimpleEntity modified +
EntityWithAccessionedSequence modified +
TranslationalModification modified +
ControlledVocabulary modified +
MarkerReference modified +
DeletedControlledVocabulary modified +
PhysicalEntityCellType modified +
RegulationReference modified +
NegativeRegulation modified +
Requirement modified +
_DeletedInstance modified +
CellLineagePath modified +
FailedReaction modified +
OtherEntity modified +
FunctionalStatus modified +
ReactionType modified +
ReferenceIsoform modified +
NegativePrecedingEvent modified +
NegativeGeneExpressionRegulation modified +
ReferenceGeneProduct modified +
CandidateSet modified +
Reaction modified +
ReactionlikeEvent modified +
ModifiedNucleotide modified +
ReferenceSequence modified +
Taxon modified +
URL modified +
StableIdentifier modified +
InteractionEvent modified +
ChemicalDrug modified +
_Deleted modified +
Depolymerisation modified +
DatabaseObject modified +
Figure modified +
PositiveGeneExpressionRegulation modified +
Drug modified +
FragmentModification modified +
StableIdentifierReleaseStatus modified +
Book modified +
ExternalOntology modified +
ReferenceTherapeutic modified +
Pathway modified +
GO_BiologicalProcess modified +
PositiveRegulation modified +
GO_CellularComponent modified +
ReferenceMolecule modified +
Cell modified +
FragmentReplacedModification modified +
GeneticallyModifiedResidue modified +
AbstractModifiedResidue modified +
CatalystActivityReference modified +
SequenceOntology modified +
ReferenceEntity modified +
ReferenceRNASequence modified +
InstanceEdit modified +
Anatomy modified +
ReplacedResidue modified +
FragmentInsertionModification modified +
Regulation modified +
Polymer modified +
DrugActionType modified +
Compartment modified +
BlackBoxEvent modified +
ControlReference modified +
Event modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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