Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
StableIdentifier created 1
OtherEntity created 1
Summation created 1
CatalystActivityReference created 1
PhysicalEntityCellType created 1
TranslationalModification created 1
ReactionType created 1
MarkerReference created 1
DeletedControlledVocabulary created 1
Taxon created 1
_UpdateTracker created 1
NonsenseMutation created 1
IntraChainCrosslinkedResidue created 1
NegativeRegulation created 1
InteractionEvent created 1
PathwayDiagram created 1
BlackBoxEvent created 1
FragmentReplacedModification created 1
Figure created 1
EntityFunctionalStatus created 1
CrosslinkedResidue created 1
CatalystActivity created 1
PsiMod created 1
CellLineagePath created 1
FailedReaction created 1
ReferenceMolecule created 1
CandidateSet created 1
ReactionlikeEvent created 1
StableIdentifierReleaseStatus created 1
_Release created 1
Regulation created 1
NegativePrecedingEvent created 1
ReferenceRNASequence created 1
_DeletedInstance created 1
ReferenceIsoform created 1
ExternalOntology created 1
DatabaseObject created 1
Drug created 1
DrugActionType created 1
Species created 1
GenomeEncodedEntity created 1
CellDevelopmentStep created 1
SimpleEntity created 1
ModifiedResidue created 1
ReplacedResidue created 1
URL created 1
PositiveRegulation created 1
ProteinDrug created 1
Disease created 1
Polymer created 1
Book created 1
Publication created 1
SequenceOntology created 1
GeneticallyModifiedResidue created 1
Pathway created 1
RNADrug created 1
InstanceEdit created 1
RegulationReference created 1
Complex created 1
ReferenceDNASequence created 1
PhysicalEntity created 1
Compartment created 1
EntitySet created 1
FragmentModification created 1
FragmentInsertionModification created 1
TranscriptionalModification created 1
Person created 1
Anatomy created 1
Polymerisation created 1
ControlReference created 1
ModifiedNucleotide created 1
EvidenceType created 1
ChemicalDrug created 1
StableIdentifierHistory created 1
AbstractModifiedResidue created 1
ReferenceGroup created 1
EntityWithAccessionedSequence created 1
DefinedSet created 1
ReviewStatus created 1
GroupModifiedResidue created 1
_Deleted created 1
Affiliation created 1
ControlledVocabulary created 1
ReferenceSequence created 1
NegativePrecedingEventReason created 1
GO_BiologicalProcess created 1
RetractionStatus created 1
InterChainCrosslinkedResidue created 1
ReferenceDatabase created 1
ReferenceEntity created 1
CellType created 1
NegativeGeneExpressionRegulation created 1
DatabaseIdentifier created 1
Event created 1
LiteratureReference created 1
FrontPage created 1
GO_MolecularFunction created 1
Requirement created 1
Cell created 1
FunctionalStatus created 1
Reaction created 1
FragmentDeletionModification created 1
FunctionalStatusType created 1
Depolymerisation created 1
ReferenceGeneProduct created 1
ReferenceTherapeutic created 1
GO_CellularComponent created 1
PositiveGeneExpressionRegulation created 1
_Deleted replacementInstances +
Event revised +
Drug revised +
InteractionEvent revised +
BlackBoxEvent revised +
GenomeEncodedEntity revised +
Cell revised +
Reaction revised +
Polymerisation revised +
CellDevelopmentStep revised +
SimpleEntity revised +
Depolymerisation revised +
ChemicalDrug revised +
ProteinDrug revised +
Polymer revised +
CellLineagePath revised +
FailedReaction revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
ReactionlikeEvent revised +
DefinedSet revised +
CandidateSet revised +
Pathway revised +
RNADrug revised +
Complex revised +
PhysicalEntity revised +
EntitySet revised +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Event structureModified +
Polymerisation structureModified +
Reaction structureModified +
Pathway structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Complex reviewed +
PhysicalEntity reviewed +
EntitySet reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
ReactionlikeEvent reviewed +
OtherEntity reviewed +
RNADrug reviewed +
Pathway reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
CellDevelopmentStep reviewed +
CellLineagePath reviewed +
ProteinDrug reviewed +
Polymer reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
Event reviewed +
InteractionEvent reviewed +
Drug reviewed +
Reaction reviewed +
Polymerisation reviewed +
GenomeEncodedEntity reviewed +
Cell reviewed +
Pathway authored +
RNADrug authored 1
OtherEntity authored 1
EntityWithAccessionedSequence authored 1
DefinedSet authored 1
CandidateSet authored 1
ReactionlikeEvent authored +
EntitySet authored 1
PhysicalEntity authored 1
Complex authored 1
GenomeEncodedEntity authored 1
Cell authored 1
Reaction authored +
Polymerisation authored +
Event authored +
Drug authored 1
InteractionEvent authored +
BlackBoxEvent authored +
ChemicalDrug authored 1
Polymer authored 1
ProteinDrug authored 1
CellLineagePath authored +
FailedReaction authored +
CellDevelopmentStep authored +
SimpleEntity authored 1
Depolymerisation authored +
RNADrug edited +
Pathway edited +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
DefinedSet edited +
CandidateSet edited +
OtherEntity edited +
EntitySet edited +
PhysicalEntity edited +
Complex edited +
Reaction edited +
Polymerisation edited +
GenomeEncodedEntity edited +
Cell edited +
BlackBoxEvent edited +
Event edited +
Drug edited +
InteractionEvent edited +
CellLineagePath edited +
Polymer edited +
ProteinDrug edited +
FailedReaction edited +
ChemicalDrug edited +
Depolymerisation edited +
SimpleEntity edited +
CellDevelopmentStep edited +
FragmentReplacedModification modified +
Figure modified +
InteractionEvent modified +
PathwayDiagram modified +
BlackBoxEvent modified +
CatalystActivity modified +
PsiMod modified +
CellLineagePath modified +
FailedReaction modified +
EntityFunctionalStatus modified +
CrosslinkedResidue modified +
CatalystActivityReference modified +
PhysicalEntityCellType modified +
TranslationalModification modified +
MarkerReference modified +
DeletedControlledVocabulary modified +
ReactionType modified +
StableIdentifier modified +
OtherEntity modified +
Summation modified +
NegativeRegulation modified +
Taxon modified +
NonsenseMutation modified +
_UpdateTracker modified +
IntraChainCrosslinkedResidue modified +
GenomeEncodedEntity modified +
Drug modified +
Species modified +
DrugActionType modified +
PositiveRegulation modified +
Polymer modified +
ProteinDrug modified +
Disease modified +
SimpleEntity modified +
CellDevelopmentStep modified +
ModifiedResidue modified +
ReplacedResidue modified +
URL modified +
StableIdentifierReleaseStatus modified +
_Release modified +
Regulation modified +
ReferenceMolecule modified +
CandidateSet modified +
ReactionlikeEvent modified +
ExternalOntology modified +
DatabaseObject modified +
NegativePrecedingEvent modified +
ReferenceRNASequence modified +
_DeletedInstance modified +
ReferenceIsoform modified +
Anatomy modified +
Polymerisation modified +
FragmentInsertionModification modified +
TranscriptionalModification modified +
Person modified +
EvidenceType modified +
StableIdentifierHistory modified +
ChemicalDrug modified +
AbstractModifiedResidue modified +
ControlReference modified +
ModifiedNucleotide modified +
GeneticallyModifiedResidue modified +
Pathway modified +
RNADrug modified +
InstanceEdit modified +
Book modified +
Publication modified +
SequenceOntology modified +
Compartment modified +
EntitySet modified +
FragmentModification modified +
RegulationReference modified +
Complex modified +
PhysicalEntity modified +
ReferenceDNASequence modified +
FunctionalStatus modified +
Requirement modified +
Cell modified +
Reaction modified +
Event modified +
LiteratureReference modified +
GO_MolecularFunction modified +
FrontPage modified +
ReferenceGeneProduct modified +
ReferenceTherapeutic modified +
GO_CellularComponent modified +
PositiveGeneExpressionRegulation modified +
FragmentDeletionModification modified +
FunctionalStatusType modified +
Depolymerisation modified +
ReviewStatus modified +
GroupModifiedResidue modified +
_Deleted modified +
ControlledVocabulary modified +
Affiliation modified +
ReferenceSequence modified +
EntityWithAccessionedSequence modified +
ReferenceGroup modified +
DefinedSet modified +
ReferenceDatabase modified +
ReferenceEntity modified +
CellType modified +
NegativeGeneExpressionRegulation modified +
DatabaseIdentifier modified +
NegativePrecedingEventReason modified +
RetractionStatus modified +
GO_BiologicalProcess modified +
InterChainCrosslinkedResidue modified +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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