Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Depolymerisation structureModified +
InteractionEvent structureModified +
Pathway structureModified +
Polymerisation structureModified +
Event structureModified +
Reaction structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
CellLineagePath authored +
EntityWithAccessionedSequence authored 1
ReactionlikeEvent authored +
ProteinDrug authored 1
RNADrug authored 1
ChemicalDrug authored 1
Cell authored 1
Depolymerisation authored +
Polymerisation authored +
SimpleEntity authored 1
FailedReaction authored +
Event authored +
Drug authored 1
GenomeEncodedEntity authored 1
OtherEntity authored 1
DefinedSet authored 1
PhysicalEntity authored 1
EntitySet authored 1
CellDevelopmentStep authored +
BlackBoxEvent authored +
InteractionEvent authored +
Pathway authored +
Complex authored 1
Polymer authored 1
Reaction authored +
CandidateSet authored 1
FailedReaction edited +
Drug edited +
Event edited +
GenomeEncodedEntity edited +
Depolymerisation edited +
Polymerisation edited +
SimpleEntity edited +
ChemicalDrug edited +
Cell edited +
CellLineagePath edited +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
RNADrug edited +
ProteinDrug edited +
Reaction edited +
CandidateSet edited +
Pathway edited +
InteractionEvent edited +
Complex edited +
Polymer edited +
CellDevelopmentStep edited +
BlackBoxEvent edited +
OtherEntity edited +
DefinedSet edited +
EntitySet edited +
PhysicalEntity edited +
Reaction revised +
CandidateSet revised +
Polymer revised +
InteractionEvent revised +
Pathway revised +
Complex revised +
CellDevelopmentStep revised +
BlackBoxEvent revised +
PhysicalEntity revised +
DefinedSet revised +
EntitySet revised +
OtherEntity revised +
Drug revised +
Event revised +
GenomeEncodedEntity revised +
FailedReaction revised +
Depolymerisation revised +
SimpleEntity revised +
Polymerisation revised +
Cell revised +
ChemicalDrug revised +
ReactionlikeEvent revised +
ProteinDrug revised +
RNADrug revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
Book modified +
StableIdentifierHistory modified +
MarkerReference modified +
NegativeRegulation modified +
Affiliation modified +
PositiveGeneExpressionRegulation modified +
CellLineagePath modified +
FragmentDeletionModification modified +
NegativePrecedingEvent modified +
AbstractModifiedResidue modified +
SimpleEntity modified +
ReferenceMolecule modified +
Person modified +
PhysicalEntity modified +
DefinedSet modified +
ReferenceRNASequence modified +
ReplacedResidue modified +
ReferenceIsoform modified +
CrosslinkedResidue modified +
GO_BiologicalProcess modified +
ReferenceGeneProduct modified +
SequenceOntology modified +
Polymer modified +
ExternalOntology modified +
StableIdentifierReleaseStatus modified +
DeletedControlledVocabulary modified +
ReferenceDNASequence modified +
ChemicalDrug modified +
Summation modified +
EntityWithAccessionedSequence modified +
Disease modified +
FragmentModification modified +
ControlReference modified +
RNADrug modified +
ReactionlikeEvent modified +
FailedReaction modified +
FunctionalStatus modified +
GO_MolecularFunction modified +
ModifiedResidue modified +
BlackBoxEvent modified +
CellDevelopmentStep modified +
DatabaseObject modified +
ReferenceDatabase modified +
IntraChainCrosslinkedResidue modified +
Regulation modified +
TranslationalModification modified +
Reaction modified +
_UpdateTracker modified +
CandidateSet modified +
Compartment modified +
LiteratureReference modified +
NonsenseMutation modified +
_Deleted modified +
ReferenceSequence modified +
_Release modified +
ReferenceTherapeutic modified +
ReferenceGroup modified +
Cell modified +
ProteinDrug modified +
CatalystActivityReference modified +
InstanceEdit modified +
RegulationReference modified +
FragmentReplacedModification modified +
GenomeEncodedEntity modified +
ReactionType modified +
ControlledVocabulary modified +
PsiMod modified +
EntityFunctionalStatus modified +
Species modified +
Figure modified +
Taxon modified +
DrugActionType modified +
OtherEntity modified +
CellType modified +
DatabaseIdentifier modified +
RetractionStatus modified +
Publication modified +
EvidenceType modified +
_DeletedInstance modified +
FunctionalStatusType modified +
InterChainCrosslinkedResidue modified +
Complex modified +
InteractionEvent modified +
PathwayDiagram modified +
NegativePrecedingEventReason modified +
CatalystActivity modified +
GroupModifiedResidue modified +
PhysicalEntityCellType modified +
GO_CellularComponent modified +
Drug modified +
Event modified +
Polymerisation modified +
Depolymerisation modified +
GeneticallyModifiedResidue modified +
FragmentInsertionModification modified +
URL modified +
ReferenceEntity modified +
FrontPage modified +
ModifiedNucleotide modified +
Anatomy modified +
EntitySet modified +
ReviewStatus modified +
Requirement modified +
PositiveRegulation modified +
TranscriptionalModification modified +
StableIdentifier modified +
NegativeGeneExpressionRegulation modified +
Pathway modified +
_Deleted replacementInstances +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
ReactionlikeEvent reviewed +
RNADrug reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
EntityWithAccessionedSequence reviewed +
Cell reviewed +
ChemicalDrug reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
Polymerisation reviewed +
Event reviewed +
Drug reviewed +
GenomeEncodedEntity reviewed +
FailedReaction reviewed +
DefinedSet reviewed +
EntitySet reviewed +
PhysicalEntity reviewed +
OtherEntity reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
InteractionEvent reviewed +
Pathway reviewed +
Complex reviewed +
CandidateSet reviewed +
Reaction reviewed +
StableIdentifierReleaseStatus created 1
Polymer created 1
ExternalOntology created 1
SequenceOntology created 1
CrosslinkedResidue created 1
ReferenceIsoform created 1
ReplacedResidue created 1
GO_BiologicalProcess created 1
ReferenceGeneProduct created 1
ReferenceRNASequence created 1
Person created 1
DefinedSet created 1
PhysicalEntity created 1
ReferenceMolecule created 1
SimpleEntity created 1
AbstractModifiedResidue created 1
FragmentDeletionModification created 1
NegativePrecedingEvent created 1
PositiveGeneExpressionRegulation created 1
CellLineagePath created 1
NegativeRegulation created 1
Affiliation created 1
StableIdentifierHistory created 1
Book created 1
MarkerReference created 1
ReferenceSequence created 1
_Deleted created 1
NonsenseMutation created 1
LiteratureReference created 1
Compartment created 1
Reaction created 1
CandidateSet created 1
_UpdateTracker created 1
TranslationalModification created 1
Regulation created 1
IntraChainCrosslinkedResidue created 1
ReferenceDatabase created 1
DatabaseObject created 1
CellDevelopmentStep created 1
BlackBoxEvent created 1
ModifiedResidue created 1
GO_MolecularFunction created 1
FunctionalStatus created 1
FailedReaction created 1
ReactionlikeEvent created 1
RNADrug created 1
ControlReference created 1
EntityWithAccessionedSequence created 1
Disease created 1
FragmentModification created 1
Summation created 1
ChemicalDrug created 1
ReferenceDNASequence created 1
DeletedControlledVocabulary created 1
PathwayDiagram created 1
InteractionEvent created 1
InterChainCrosslinkedResidue created 1
Complex created 1
FunctionalStatusType created 1
_DeletedInstance created 1
EvidenceType created 1
RetractionStatus created 1
Publication created 1
DatabaseIdentifier created 1
CellType created 1
OtherEntity created 1
DrugActionType created 1
Figure created 1
Taxon created 1
Species created 1
EntityFunctionalStatus created 1
ControlledVocabulary created 1
PsiMod created 1
ReactionType created 1
GenomeEncodedEntity created 1
FragmentReplacedModification created 1
RegulationReference created 1
InstanceEdit created 1
CatalystActivityReference created 1
ProteinDrug created 1
Cell created 1
ReferenceGroup created 1
ReferenceTherapeutic created 1
_Release created 1
NegativeGeneExpressionRegulation created 1
Pathway created 1
StableIdentifier created 1
TranscriptionalModification created 1
PositiveRegulation created 1
Requirement created 1
ReviewStatus created 1
Anatomy created 1
ModifiedNucleotide created 1
EntitySet created 1
FrontPage created 1
ReferenceEntity created 1
URL created 1
FragmentInsertionModification created 1
GeneticallyModifiedResidue created 1
Depolymerisation created 1
Polymerisation created 1
Event created 1
Drug created 1
GO_CellularComponent created 1
PhysicalEntityCellType created 1
GroupModifiedResidue created 1
CatalystActivity created 1
NegativePrecedingEventReason created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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