Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InteractionEvent structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
Polymer edited +
CellDevelopmentStep edited +
CandidateSet edited +
BlackBoxEvent edited +
Depolymerisation edited +
PhysicalEntity edited +
DefinedSet edited +
FailedReaction edited +
EntitySet edited +
ChemicalDrug edited +
ProteinDrug edited +
Pathway edited +
SimpleEntity edited +
EntityWithAccessionedSequence edited +
Cell edited +
ReactionlikeEvent edited +
RNADrug edited +
GenomeEncodedEntity edited +
CellLineagePath edited +
OtherEntity edited +
Drug edited +
Polymerisation edited +
Reaction edited +
InteractionEvent edited +
Event edited +
Complex edited +
EntitySet authored 1
ChemicalDrug authored 1
SimpleEntity authored 1
Pathway authored +
ProteinDrug authored 1
DefinedSet authored 1
FailedReaction authored +
Cell authored 1
ReactionlikeEvent authored +
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
BlackBoxEvent authored +
Depolymerisation authored +
PhysicalEntity authored 1
Polymer authored 1
CellDevelopmentStep authored +
Polymerisation authored +
Event authored +
Complex authored 1
InteractionEvent authored +
Reaction authored +
CellLineagePath authored +
RNADrug authored 1
GenomeEncodedEntity authored 1
Drug authored 1
OtherEntity authored 1
DefinedSet reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
Pathway reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
Cell reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
Polymer reviewed +
Depolymerisation reviewed +
BlackBoxEvent reviewed +
CandidateSet reviewed +
PhysicalEntity reviewed +
Polymerisation reviewed +
InteractionEvent reviewed +
Reaction reviewed +
Event reviewed +
Complex reviewed +
RNADrug reviewed +
GenomeEncodedEntity reviewed +
CellLineagePath reviewed +
Drug reviewed +
OtherEntity reviewed +
_Deleted replacementInstances +
Pathway internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction revised +
InteractionEvent revised +
Complex revised +
Event revised +
Polymerisation revised +
OtherEntity revised +
Drug revised +
RNADrug revised +
GenomeEncodedEntity revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
ReactionlikeEvent revised +
Cell revised +
FailedReaction revised +
DefinedSet revised +
ProteinDrug revised +
SimpleEntity revised +
Pathway revised +
ChemicalDrug revised +
EntitySet revised +
Polymer revised +
CellDevelopmentStep revised +
PhysicalEntity revised +
Depolymerisation revised +
BlackBoxEvent revised +
CandidateSet revised +
Event created 1
InteractionEvent created 1
LiteratureReference created 1
MarkerReference created 1
FrontPage created 1
FragmentDeletionModification created 1
Affiliation created 1
FunctionalStatusType created 1
ModifiedNucleotide created 1
ReferenceGroup created 1
GeneticallyModifiedResidue created 1
EntitySet created 1
GO_CellularComponent created 1
PathwayDiagram created 1
DefinedSet created 1
PsiMod created 1
ModifiedResidue created 1
URL created 1
PhysicalEntity created 1
ReferenceDNASequence created 1
DatabaseObject created 1
Depolymerisation created 1
InterChainCrosslinkedResidue created 1
Disease created 1
ReferenceGeneProduct created 1
Complex created 1
Regulation created 1
_Release created 1
FragmentModification created 1
StableIdentifier created 1
ControlReference created 1
Polymerisation created 1
ReferenceSequence created 1
OtherEntity created 1
ReviewStatus created 1
RegulationReference created 1
TranslationalModification created 1
CatalystActivity created 1
RNADrug created 1
ReactionlikeEvent created 1
CellType created 1
NegativePrecedingEvent created 1
EntityWithAccessionedSequence created 1
SimpleEntity created 1
Pathway created 1
ProteinDrug created 1
_DeletedInstance created 1
Publication created 1
FailedReaction created 1
SequenceOntology created 1
StableIdentifierReleaseStatus created 1
Figure created 1
ControlledVocabulary created 1
ReferenceEntity created 1
Compartment created 1
GO_BiologicalProcess created 1
CellDevelopmentStep created 1
PositiveGeneExpressionRegulation created 1
ReferenceDatabase created 1
TranscriptionalModification created 1
RetractionStatus created 1
Anatomy created 1
ReferenceTherapeutic created 1
PhysicalEntityCellType created 1
EvidenceType created 1
Drug created 1
FunctionalStatus created 1
Species created 1
Taxon created 1
Requirement created 1
CatalystActivityReference created 1
ReplacedResidue created 1
ReferenceRNASequence created 1
IntraChainCrosslinkedResidue created 1
DatabaseIdentifier created 1
FragmentReplacedModification created 1
Summation created 1
GO_MolecularFunction created 1
GroupModifiedResidue created 1
AbstractModifiedResidue created 1
ExternalOntology created 1
DrugActionType created 1
ReferenceMolecule created 1
ReactionType created 1
InstanceEdit created 1
Reaction created 1
FragmentInsertionModification created 1
_Deleted created 1
_UpdateTracker created 1
NegativeGeneExpressionRegulation created 1
NonsenseMutation created 1
CrosslinkedResidue created 1
StableIdentifierHistory created 1
NegativeRegulation created 1
CellLineagePath created 1
GenomeEncodedEntity created 1
Book created 1
Cell created 1
PositiveRegulation created 1
NegativePrecedingEventReason created 1
ChemicalDrug created 1
EntityFunctionalStatus created 1
ReferenceIsoform created 1
DeletedControlledVocabulary created 1
Person created 1
BlackBoxEvent created 1
CandidateSet created 1
Polymer created 1
ReferenceRNASequence modified +
Requirement modified +
CatalystActivityReference modified +
ReplacedResidue modified +
AbstractModifiedResidue modified +
DrugActionType modified +
ExternalOntology modified +
IntraChainCrosslinkedResidue modified +
DatabaseIdentifier modified +
GO_MolecularFunction modified +
Summation modified +
FragmentReplacedModification modified +
GroupModifiedResidue modified +
RetractionStatus modified +
Anatomy modified +
PhysicalEntityCellType modified +
ReferenceTherapeutic modified +
ReferenceDatabase modified +
TranscriptionalModification modified +
Species modified +
Taxon modified +
EvidenceType modified +
Drug modified +
FunctionalStatus modified +
ChemicalDrug modified +
Book modified +
Cell modified +
PositiveRegulation modified +
NegativePrecedingEventReason modified +
CandidateSet modified +
BlackBoxEvent modified +
Polymer modified +
ReferenceIsoform modified +
EntityFunctionalStatus modified +
DeletedControlledVocabulary modified +
Person modified +
_Deleted modified +
_UpdateTracker modified +
ReferenceMolecule modified +
ReactionType modified +
InstanceEdit modified +
Reaction modified +
FragmentInsertionModification modified +
CellLineagePath modified +
GenomeEncodedEntity modified +
NegativeGeneExpressionRegulation modified +
NonsenseMutation modified +
StableIdentifierHistory modified +
CrosslinkedResidue modified +
NegativeRegulation modified +
GeneticallyModifiedResidue modified +
EntitySet modified +
GO_CellularComponent modified +
PathwayDiagram modified +
DefinedSet modified +
ReferenceGroup modified +
ModifiedNucleotide modified +
PhysicalEntity modified +
URL modified +
ReferenceDNASequence modified +
Depolymerisation modified +
DatabaseObject modified +
InterChainCrosslinkedResidue modified +
ReferenceGeneProduct modified +
Disease modified +
PsiMod modified +
ModifiedResidue modified +
MarkerReference modified +
Event modified +
InteractionEvent modified +
LiteratureReference modified +
FragmentDeletionModification modified +
Affiliation modified +
FunctionalStatusType modified +
FrontPage modified +
Pathway modified +
ProteinDrug modified +
SimpleEntity modified +
Publication modified +
_DeletedInstance modified +
FailedReaction modified +
SequenceOntology modified +
ReactionlikeEvent modified +
NegativePrecedingEvent modified +
CellType modified +
EntityWithAccessionedSequence modified +
Compartment modified +
GO_BiologicalProcess modified +
CellDevelopmentStep modified +
PositiveGeneExpressionRegulation modified +
StableIdentifierReleaseStatus modified +
Figure modified +
ControlledVocabulary modified +
ReferenceEntity modified +
Polymerisation modified +
Regulation modified +
Complex modified +
FragmentModification modified +
_Release modified +
ControlReference modified +
StableIdentifier modified +
RegulationReference modified +
CatalystActivity modified +
TranslationalModification modified +
RNADrug modified +
ReferenceSequence modified +
ReviewStatus modified +
OtherEntity modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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