Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent revised +
EntitySet revised +
GenomeEncodedEntity revised +
OtherEntity revised +
ProteinDrug revised +
Drug revised +
FailedReaction revised +
RNADrug revised +
EntityWithAccessionedSequence revised +
Polymer revised +
Reaction revised +
Complex revised +
SimpleEntity revised +
CellDevelopmentStep revised +
BlackBoxEvent revised +
CellLineagePath revised +
CandidateSet revised +
Depolymerisation revised +
DefinedSet revised +
Event revised +
Polymerisation revised +
Pathway revised +
InteractionEvent revised +
ChemicalDrug revised +
Cell revised +
PhysicalEntity revised +
RetractionStatus created 1
NegativeRegulation created 1
ReferenceTherapeutic created 1
TranscriptionalModification created 1
Figure created 1
NegativePrecedingEvent created 1
OtherEntity created 1
ReferenceIsoform created 1
GO_MolecularFunction created 1
Complex created 1
EntityWithAccessionedSequence created 1
Compartment created 1
PsiMod created 1
Species created 1
PhysicalEntityCellType created 1
CellDevelopmentStep created 1
CrosslinkedResidue created 1
ExternalOntology created 1
Taxon created 1
ReplacedResidue created 1
PhysicalEntity created 1
_Release created 1
Anatomy created 1
ReferenceDNASequence created 1
Disease created 1
FrontPage created 1
GeneticallyModifiedResidue created 1
_Deleted created 1
CatalystActivityReference created 1
Summation created 1
URL created 1
ReferenceRNASequence created 1
FunctionalStatus created 1
Polymer created 1
DatabaseObject created 1
RNADrug created 1
NonsenseMutation created 1
PathwayDiagram created 1
InterChainCrosslinkedResidue created 1
SimpleEntity created 1
CatalystActivity created 1
MarkerReference created 1
SequenceOntology created 1
CandidateSet created 1
ReactionType created 1
ReferenceMolecule created 1
Person created 1
Requirement created 1
InstanceEdit created 1
CellType created 1
EntitySet created 1
_UpdateTracker created 1
ProteinDrug created 1
ControlReference created 1
StableIdentifierReleaseStatus created 1
GenomeEncodedEntity created 1
GroupModifiedResidue created 1
ReviewStatus created 1
IntraChainCrosslinkedResidue created 1
Reaction created 1
PositiveGeneExpressionRegulation created 1
Drug created 1
Affiliation created 1
Publication created 1
PositiveRegulation created 1
NegativePrecedingEventReason created 1
CellLineagePath created 1
EvidenceType created 1
DatabaseIdentifier created 1
EntityFunctionalStatus created 1
DefinedSet created 1
FragmentInsertionModification created 1
Polymerisation created 1
FragmentDeletionModification created 1
ControlledVocabulary created 1
DeletedControlledVocabulary created 1
Cell created 1
GO_BiologicalProcess created 1
_DeletedInstance created 1
ModifiedNucleotide created 1
Pathway created 1
ReferenceDatabase created 1
Book created 1
ReferenceGeneProduct created 1
FragmentReplacedModification created 1
GO_CellularComponent created 1
LiteratureReference created 1
ReactionlikeEvent created 1
NegativeGeneExpressionRegulation created 1
FragmentModification created 1
ReferenceSequence created 1
StableIdentifier created 1
ModifiedResidue created 1
Regulation created 1
FailedReaction created 1
DrugActionType created 1
ReferenceGroup created 1
BlackBoxEvent created 1
RegulationReference created 1
TranslationalModification created 1
AbstractModifiedResidue created 1
StableIdentifierHistory created 1
Depolymerisation created 1
Event created 1
FunctionalStatusType created 1
ReferenceEntity created 1
InteractionEvent created 1
ChemicalDrug created 1
_Deleted replacementInstances +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
Event structureModified +
Reaction structureModified +
Pathway structureModified +
InteractionEvent structureModified +
Reaction modified +
ReviewStatus modified +
IntraChainCrosslinkedResidue modified +
Affiliation modified +
Drug modified +
PositiveGeneExpressionRegulation modified +
Publication modified +
EntitySet modified +
_UpdateTracker modified +
ControlReference modified +
ProteinDrug modified +
GroupModifiedResidue modified +
StableIdentifierReleaseStatus modified +
GenomeEncodedEntity modified +
FragmentInsertionModification modified +
FragmentDeletionModification modified +
Polymerisation modified +
DeletedControlledVocabulary modified +
ControlledVocabulary modified +
ModifiedNucleotide modified +
GO_BiologicalProcess modified +
_DeletedInstance modified +
Cell modified +
Pathway modified +
PositiveRegulation modified +
NegativePrecedingEventReason modified +
CellLineagePath modified +
DatabaseIdentifier modified +
EvidenceType modified +
DefinedSet modified +
EntityFunctionalStatus modified +
ModifiedResidue modified +
StableIdentifier modified +
ReferenceSequence modified +
FailedReaction modified +
DrugActionType modified +
Regulation modified +
ReferenceGeneProduct modified +
FragmentReplacedModification modified +
ReferenceDatabase modified +
Book modified +
ReactionlikeEvent modified +
LiteratureReference modified +
GO_CellularComponent modified +
NegativeGeneExpressionRegulation modified +
FragmentModification modified +
Event modified +
ReferenceEntity modified +
FunctionalStatusType modified +
ChemicalDrug modified +
InteractionEvent modified +
ReferenceGroup modified +
BlackBoxEvent modified +
RegulationReference modified +
Depolymerisation modified +
StableIdentifierHistory modified +
AbstractModifiedResidue modified +
TranslationalModification modified +
GO_MolecularFunction modified +
Complex modified +
ReferenceIsoform modified +
EntityWithAccessionedSequence modified +
Compartment modified +
PsiMod modified +
Species modified +
NegativeRegulation modified +
RetractionStatus modified +
TranscriptionalModification modified +
ReferenceTherapeutic modified +
NegativePrecedingEvent modified +
Figure modified +
OtherEntity modified +
ReplacedResidue modified +
PhysicalEntity modified +
_Release modified +
PhysicalEntityCellType modified +
CellDevelopmentStep modified +
ExternalOntology modified +
CrosslinkedResidue modified +
Taxon modified +
Polymer modified +
ReferenceRNASequence modified +
FunctionalStatus modified +
RNADrug modified +
DatabaseObject modified +
NonsenseMutation modified +
PathwayDiagram modified +
InterChainCrosslinkedResidue modified +
CatalystActivity modified +
SimpleEntity modified +
Anatomy modified +
GeneticallyModifiedResidue modified +
FrontPage modified +
_Deleted modified +
Disease modified +
ReferenceDNASequence modified +
Summation modified +
URL modified +
CatalystActivityReference modified +
Requirement modified +
Person modified +
ReactionType modified +
ReferenceMolecule modified +
CellType modified +
InstanceEdit modified +
MarkerReference modified +
SequenceOntology modified +
CandidateSet modified +
CellDevelopmentStep authored +
BlackBoxEvent authored +
CellLineagePath authored +
CandidateSet authored 1
Depolymerisation authored +
DefinedSet authored 1
Event authored +
Polymerisation authored +
InteractionEvent authored +
Pathway authored +
ChemicalDrug authored 1
PhysicalEntity authored 1
Cell authored 1
ReactionlikeEvent authored +
EntitySet authored 1
GenomeEncodedEntity authored 1
OtherEntity authored 1
ProteinDrug authored 1
Drug authored 1
FailedReaction authored +
RNADrug authored 1
EntityWithAccessionedSequence authored 1
Polymer authored 1
Complex authored 1
Reaction authored +
SimpleEntity authored 1
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
SimpleEntity reviewed +
Polymer reviewed +
Reaction reviewed +
Complex reviewed +
RNADrug reviewed +
EntityWithAccessionedSequence reviewed +
FailedReaction reviewed +
Drug reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
PhysicalEntity reviewed +
Cell reviewed +
ChemicalDrug reviewed +
InteractionEvent reviewed +
Pathway reviewed +
Event reviewed +
Polymerisation reviewed +
Depolymerisation reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
CellLineagePath reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
Polymerisation edited +
Event edited +
PhysicalEntity edited +
Cell edited +
ChemicalDrug edited +
InteractionEvent edited +
Pathway edited +
CellLineagePath edited +
BlackBoxEvent edited +
CellDevelopmentStep edited +
Depolymerisation edited +
CandidateSet edited +
DefinedSet edited +
Complex edited +
Polymer edited +
Reaction edited +
EntityWithAccessionedSequence edited +
RNADrug edited +
FailedReaction edited +
Drug edited +
SimpleEntity edited +
EntitySet edited +
ReactionlikeEvent edited +
ProteinDrug edited +
OtherEntity edited +
GenomeEncodedEntity edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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