Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CandidateSet authored 1
OtherEntity authored 1
Cell authored 1
CellDevelopmentStep authored +
Event authored +
InteractionEvent authored +
GenomeEncodedEntity authored 1
SimpleEntity authored 1
RNADrug authored 1
CellLineagePath authored +
Polymerisation authored +
BlackBoxEvent authored +
Drug authored 1
Depolymerisation authored +
ChemicalDrug authored 1
Reaction authored +
EntityWithAccessionedSequence authored 1
EntitySet authored 1
DefinedSet authored 1
Complex authored 1
Polymer authored 1
ProteinDrug authored 1
ReactionlikeEvent authored +
FailedReaction authored +
PhysicalEntity authored 1
Pathway authored +
_Deleted replacementInstances +
Requirement modified +
EntityFunctionalStatus modified +
TranscriptionalModification modified +
PathwayDiagram modified +
Compartment modified +
Pathway modified +
NonsenseMutation modified +
ReferenceDNASequence modified +
SequenceOntology modified +
EntitySet modified +
ReactionType modified +
Polymer modified +
LiteratureReference modified +
GO_BiologicalProcess modified +
Publication modified +
NegativePrecedingEventReason modified +
FrontPage modified +
NegativeGeneExpressionRegulation modified +
Reaction modified +
ReferenceGroup modified +
StableIdentifierReleaseStatus modified +
FunctionalStatusType modified +
Cell modified +
CellDevelopmentStep modified +
GO_CellularComponent modified +
RegulationReference modified +
PositiveRegulation modified +
Anatomy modified +
SimpleEntity modified +
RetractionStatus modified +
ReferenceMolecule modified +
FailedReaction modified +
FragmentModification modified +
_Deleted modified +
CellType modified +
AbstractModifiedResidue modified +
PhysicalEntityCellType modified +
Regulation modified +
CellLineagePath modified +
ReplacedResidue modified +
ModifiedResidue modified +
Drug modified +
ReviewStatus modified +
FragmentReplacedModification modified +
Species modified +
DatabaseIdentifier modified +
ChemicalDrug modified +
NegativePrecedingEvent modified +
GO_MolecularFunction modified +
CatalystActivityReference modified +
GroupModifiedResidue modified +
InteractionEvent modified +
PositiveGeneExpressionRegulation modified +
RNADrug modified +
ReferenceIsoform modified +
PhysicalEntity modified +
Disease modified +
MarkerReference modified +
GeneticallyModifiedResidue modified +
_Release modified +
ModifiedNucleotide modified +
NegativeRegulation modified +
_DeletedInstance modified +
Taxon modified +
Figure modified +
InterChainCrosslinkedResidue modified +
URL modified +
FragmentInsertionModification modified +
ReferenceTherapeutic modified +
ReferenceEntity modified +
EntityWithAccessionedSequence modified +
CandidateSet modified +
Event modified +
CatalystActivity modified +
Affiliation modified +
StableIdentifier modified +
EvidenceType modified +
DrugActionType modified +
ReactionlikeEvent modified +
ControlReference modified +
DefinedSet modified +
Complex modified +
IntraChainCrosslinkedResidue modified +
DeletedControlledVocabulary modified +
ExternalOntology modified +
Person modified +
ProteinDrug modified +
_UpdateTracker modified +
ControlledVocabulary modified +
ReferenceDatabase modified +
Polymerisation modified +
PsiMod modified +
StableIdentifierHistory modified +
CrosslinkedResidue modified +
BlackBoxEvent modified +
Book modified +
Depolymerisation modified +
FunctionalStatus modified +
FragmentDeletionModification modified +
OtherEntity modified +
InstanceEdit modified +
ReferenceSequence modified +
DatabaseObject modified +
GenomeEncodedEntity modified +
TranslationalModification modified +
ReferenceGeneProduct modified +
Summation modified +
ReferenceRNASequence modified +
Reaction revised +
ChemicalDrug revised +
EntityWithAccessionedSequence revised +
CellLineagePath revised +
Polymerisation revised +
Drug revised +
BlackBoxEvent revised +
Depolymerisation revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
RNADrug revised +
CandidateSet revised +
OtherEntity revised +
CellDevelopmentStep revised +
Cell revised +
InteractionEvent revised +
Event revised +
Pathway revised +
FailedReaction revised +
ReactionlikeEvent revised +
PhysicalEntity revised +
ProteinDrug revised +
EntitySet revised +
DefinedSet revised +
Complex revised +
Polymer revised +
GenomeEncodedEntity edited +
RNADrug edited +
SimpleEntity edited +
OtherEntity edited +
CandidateSet edited +
Event edited +
InteractionEvent edited +
CellDevelopmentStep edited +
Cell edited +
ChemicalDrug edited +
Reaction edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
Polymerisation edited +
Depolymerisation edited +
Drug edited +
BlackBoxEvent edited +
ProteinDrug edited +
EntitySet edited +
DefinedSet edited +
Polymer edited +
Complex edited +
Pathway edited +
FailedReaction edited +
ReactionlikeEvent edited +
PhysicalEntity edited +
InstanceEdit created 1
OtherEntity created 1
DatabaseObject created 1
ReferenceSequence created 1
ReferenceGeneProduct created 1
TranslationalModification created 1
GenomeEncodedEntity created 1
ReferenceRNASequence created 1
Summation created 1
CrosslinkedResidue created 1
StableIdentifierHistory created 1
PsiMod created 1
Polymerisation created 1
Depolymerisation created 1
BlackBoxEvent created 1
Book created 1
FunctionalStatus created 1
FragmentDeletionModification created 1
DefinedSet created 1
ExternalOntology created 1
DeletedControlledVocabulary created 1
Complex created 1
IntraChainCrosslinkedResidue created 1
_UpdateTracker created 1
ProteinDrug created 1
Person created 1
ControlledVocabulary created 1
ReferenceDatabase created 1
DrugActionType created 1
ReactionlikeEvent created 1
ControlReference created 1
CandidateSet created 1
CatalystActivity created 1
Event created 1
Affiliation created 1
EvidenceType created 1
StableIdentifier created 1
URL created 1
InterChainCrosslinkedResidue created 1
ReferenceEntity created 1
ReferenceTherapeutic created 1
FragmentInsertionModification created 1
EntityWithAccessionedSequence created 1
ModifiedNucleotide created 1
_Release created 1
NegativeRegulation created 1
_DeletedInstance created 1
Figure created 1
Taxon created 1
ReferenceIsoform created 1
PhysicalEntity created 1
Disease created 1
GeneticallyModifiedResidue created 1
MarkerReference created 1
NegativePrecedingEvent created 1
GO_MolecularFunction created 1
PositiveGeneExpressionRegulation created 1
InteractionEvent created 1
GroupModifiedResidue created 1
CatalystActivityReference created 1
RNADrug created 1
ModifiedResidue created 1
ReplacedResidue created 1
CellLineagePath created 1
FragmentReplacedModification created 1
ReviewStatus created 1
Species created 1
Drug created 1
DatabaseIdentifier created 1
ChemicalDrug created 1
CellType created 1
AbstractModifiedResidue created 1
PhysicalEntityCellType created 1
Regulation created 1
FailedReaction created 1
ReferenceMolecule created 1
RetractionStatus created 1
FragmentModification created 1
_Deleted created 1
FunctionalStatusType created 1
GO_CellularComponent created 1
CellDevelopmentStep created 1
Cell created 1
PositiveRegulation created 1
Anatomy created 1
RegulationReference created 1
SimpleEntity created 1
Publication created 1
NegativePrecedingEventReason created 1
FrontPage created 1
NegativeGeneExpressionRegulation created 1
StableIdentifierReleaseStatus created 1
ReferenceGroup created 1
Reaction created 1
EntitySet created 1
Polymer created 1
ReactionType created 1
LiteratureReference created 1
GO_BiologicalProcess created 1
EntityFunctionalStatus created 1
Requirement created 1
PathwayDiagram created 1
TranscriptionalModification created 1
Pathway created 1
Compartment created 1
ReferenceDNASequence created 1
SequenceOntology created 1
NonsenseMutation created 1
Reaction structureModified +
Pathway structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
Pathway internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
CandidateSet reviewed +
OtherEntity reviewed +
Cell reviewed +
CellDevelopmentStep reviewed +
InteractionEvent reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
RNADrug reviewed +
Polymerisation reviewed +
CellLineagePath reviewed +
Drug reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
ChemicalDrug reviewed +
EntitySet reviewed +
DefinedSet reviewed +
Polymer reviewed +
Complex reviewed +
ProteinDrug reviewed +
ReactionlikeEvent reviewed +
FailedReaction reviewed +
PhysicalEntity reviewed +
Pathway reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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