Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CandidateSet edited +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
FailedReaction edited +
Polymer edited +
RNADrug edited +
Depolymerisation edited +
InteractionEvent edited +
Drug edited +
Polymerisation edited +
Pathway edited +
Reaction edited +
CellLineagePath edited +
Cell edited +
Event edited +
GenomeEncodedEntity edited +
ProteinDrug edited +
DefinedSet edited +
BlackBoxEvent edited +
Complex edited +
OtherEntity edited +
SimpleEntity edited +
PhysicalEntity edited +
EntitySet edited +
ChemicalDrug edited +
CellDevelopmentStep edited +
FunctionalStatus modified +
EntityWithAccessionedSequence modified +
PositiveGeneExpressionRegulation modified +
Figure modified +
DatabaseIdentifier modified +
RNADrug modified +
FailedReaction modified +
ReactionlikeEvent modified +
InteractionEvent modified +
StableIdentifierHistory modified +
ControlledVocabulary modified +
IntraChainCrosslinkedResidue modified +
Book modified +
Complex modified +
Affiliation modified +
_UpdateTracker modified +
FragmentDeletionModification modified +
ModifiedResidue modified +
Compartment modified +
Summation modified +
EntitySet modified +
RegulationReference modified +
FragmentModification modified +
ReferenceMolecule modified +
NegativePrecedingEvent modified +
ReferenceDNASequence modified +
ReferenceSequence modified +
AbstractModifiedResidue modified +
DeletedControlledVocabulary modified +
ModifiedNucleotide modified +
TranscriptionalModification modified +
Polymer modified +
StableIdentifierReleaseStatus modified +
PathwayDiagram modified +
CatalystActivity modified +
Depolymerisation modified +
ReferenceGeneProduct modified +
PsiMod modified +
PhysicalEntityCellType modified +
EntityFunctionalStatus modified +
ProteinDrug modified +
DatabaseObject modified +
URL modified +
GenomeEncodedEntity modified +
Reaction modified +
CellLineagePath modified +
StableIdentifier modified +
RetractionStatus modified +
DefinedSet modified +
SimpleEntity modified +
SequenceOntology modified +
PhysicalEntity modified +
Requirement modified +
InterChainCrosslinkedResidue modified +
CatalystActivityReference modified +
GroupModifiedResidue modified +
GO_CellularComponent modified +
ReplacedResidue modified +
CandidateSet modified +
TranslationalModification modified +
Species modified +
Disease modified +
ControlReference modified +
Cell modified +
NegativePrecedingEventReason modified +
Pathway modified +
Polymerisation modified +
BlackBoxEvent modified +
PositiveRegulation modified +
CrosslinkedResidue modified +
NonsenseMutation modified +
Publication modified +
OtherEntity modified +
InstanceEdit modified +
CellDevelopmentStep modified +
FragmentReplacedModification modified +
GO_MolecularFunction modified +
ChemicalDrug modified +
ReviewStatus modified +
ReferenceEntity modified +
_DeletedInstance modified +
FragmentInsertionModification modified +
ExternalOntology modified +
ReferenceIsoform modified +
ReferenceDatabase modified +
NegativeGeneExpressionRegulation modified +
ReferenceGroup modified +
ReferenceRNASequence modified +
_Release modified +
Taxon modified +
Event modified +
GeneticallyModifiedResidue modified +
Drug modified +
DrugActionType modified +
CellType modified +
GO_BiologicalProcess modified +
ReactionType modified +
MarkerReference modified +
NegativeRegulation modified +
LiteratureReference modified +
Person modified +
EvidenceType modified +
_Deleted modified +
FunctionalStatusType modified +
ReferenceTherapeutic modified +
FrontPage modified +
Regulation modified +
Anatomy modified +
OtherEntity revised +
SimpleEntity revised +
DefinedSet revised +
Complex revised +
BlackBoxEvent revised +
CellDevelopmentStep revised +
ChemicalDrug revised +
PhysicalEntity revised +
EntitySet revised +
FailedReaction revised +
ReactionlikeEvent revised +
Polymer revised +
RNADrug revised +
CandidateSet revised +
EntityWithAccessionedSequence revised +
Reaction revised +
Pathway revised +
CellLineagePath revised +
Polymerisation revised +
Drug revised +
Event revised +
GenomeEncodedEntity revised +
Cell revised +
ProteinDrug revised +
Depolymerisation revised +
InteractionEvent revised +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Reaction structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
_Deleted replacementInstances +
Complex created 1
_UpdateTracker created 1
Affiliation created 1
FragmentDeletionModification created 1
ModifiedResidue created 1
Compartment created 1
Summation created 1
EntitySet created 1
FragmentModification created 1
RegulationReference created 1
ReferenceMolecule created 1
NegativePrecedingEvent created 1
ReferenceDNASequence created 1
ReferenceSequence created 1
FunctionalStatus created 1
EntityWithAccessionedSequence created 1
PositiveGeneExpressionRegulation created 1
Figure created 1
RNADrug created 1
DatabaseIdentifier created 1
FailedReaction created 1
ReactionlikeEvent created 1
InteractionEvent created 1
StableIdentifierHistory created 1
ControlledVocabulary created 1
IntraChainCrosslinkedResidue created 1
Book created 1
RetractionStatus created 1
DefinedSet created 1
SimpleEntity created 1
SequenceOntology created 1
PhysicalEntity created 1
Requirement created 1
InterChainCrosslinkedResidue created 1
CatalystActivityReference created 1
AbstractModifiedResidue created 1
ModifiedNucleotide created 1
DeletedControlledVocabulary created 1
TranscriptionalModification created 1
Polymer created 1
StableIdentifierReleaseStatus created 1
PathwayDiagram created 1
CatalystActivity created 1
ReferenceGeneProduct created 1
Depolymerisation created 1
PsiMod created 1
PhysicalEntityCellType created 1
EntityFunctionalStatus created 1
ProteinDrug created 1
URL created 1
DatabaseObject created 1
GenomeEncodedEntity created 1
Reaction created 1
CellLineagePath created 1
StableIdentifier created 1
BlackBoxEvent created 1
PositiveRegulation created 1
CrosslinkedResidue created 1
Publication created 1
OtherEntity created 1
NonsenseMutation created 1
InstanceEdit created 1
FragmentReplacedModification created 1
CellDevelopmentStep created 1
GO_MolecularFunction created 1
ChemicalDrug created 1
GroupModifiedResidue created 1
GO_CellularComponent created 1
ReplacedResidue created 1
CandidateSet created 1
TranslationalModification created 1
Species created 1
Disease created 1
ControlReference created 1
NegativePrecedingEventReason created 1
Cell created 1
Pathway created 1
Polymerisation created 1
DrugActionType created 1
CellType created 1
GO_BiologicalProcess created 1
ReactionType created 1
MarkerReference created 1
NegativeRegulation created 1
LiteratureReference created 1
EvidenceType created 1
Person created 1
FunctionalStatusType created 1
_Deleted created 1
ReferenceTherapeutic created 1
Regulation created 1
Anatomy created 1
FrontPage created 1
ReviewStatus created 1
ReferenceEntity created 1
_DeletedInstance created 1
FragmentInsertionModification created 1
ReferenceIsoform created 1
ExternalOntology created 1
ReferenceDatabase created 1
NegativeGeneExpressionRegulation created 1
ReferenceGroup created 1
ReferenceRNASequence created 1
_Release created 1
Event created 1
Taxon created 1
GeneticallyModifiedResidue created 1
Drug created 1
InteractionEvent authored +
Depolymerisation authored +
Pathway authored +
CellLineagePath authored +
Reaction authored +
Polymerisation authored +
Drug authored 1
ProteinDrug authored 1
Event authored +
Cell authored 1
GenomeEncodedEntity authored 1
CandidateSet authored 1
EntityWithAccessionedSequence authored 1
FailedReaction authored +
ReactionlikeEvent authored +
RNADrug authored 1
Polymer authored 1
PhysicalEntity authored 1
EntitySet authored 1
CellDevelopmentStep authored +
ChemicalDrug authored 1
DefinedSet authored 1
BlackBoxEvent authored +
Complex authored 1
OtherEntity authored 1
SimpleEntity authored 1
OtherEntity reviewed +
SimpleEntity reviewed +
DefinedSet reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
ChemicalDrug reviewed +
PhysicalEntity reviewed +
EntitySet reviewed +
FailedReaction reviewed +
ReactionlikeEvent reviewed +
Polymer reviewed +
RNADrug reviewed +
CandidateSet reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
CellLineagePath reviewed +
Reaction reviewed +
Polymerisation reviewed +
Drug reviewed +
ProteinDrug reviewed +
Event reviewed +
Cell reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
Depolymerisation reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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