Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InteractionEvent structureModified +
Reaction structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Event structureModified +
Polymer revised +
CandidateSet revised +
FailedReaction revised +
GenomeEncodedEntity revised +
Pathway revised +
EntityWithAccessionedSequence revised +
ChemicalDrug revised +
EntitySet revised +
Reaction revised +
OtherEntity revised +
RNADrug revised +
PhysicalEntity revised +
BlackBoxEvent revised +
Complex revised +
Cell revised +
Depolymerisation revised +
Event revised +
CellLineagePath revised +
CellDevelopmentStep revised +
DefinedSet revised +
ReactionlikeEvent revised +
SimpleEntity revised +
ProteinDrug revised +
InteractionEvent revised +
Polymerisation revised +
Drug revised +
OtherEntity reviewed +
EntitySet reviewed +
Reaction reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
GenomeEncodedEntity reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
Polymer reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
Polymerisation reviewed +
Drug reviewed +
CellLineagePath reviewed +
CellDevelopmentStep reviewed +
DefinedSet reviewed +
ReactionlikeEvent reviewed +
SimpleEntity reviewed +
Cell reviewed +
Depolymerisation reviewed +
Event reviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
CatalystActivityReference modified +
Reaction modified +
BlackBoxEvent modified +
RNADrug modified +
ReferenceGroup modified +
PathwayDiagram modified +
Species modified +
GO_MolecularFunction modified +
CrosslinkedResidue modified +
DatabaseIdentifier modified +
ReferenceDatabase modified +
EvidenceType modified +
Pathway modified +
ReferenceRNASequence modified +
_Release modified +
CellType modified +
CandidateSet modified +
FailedReaction modified +
ReferenceDNASequence modified +
StableIdentifier modified +
Polymerisation modified +
Disease modified +
ExternalOntology modified +
GeneticallyModifiedResidue modified +
DefinedSet modified +
ReactionType modified +
SequenceOntology modified +
Publication modified +
GroupModifiedResidue modified +
URL modified +
Complex modified +
Anatomy modified +
FragmentInsertionModification modified +
ReferenceIsoform modified +
FragmentDeletionModification modified +
ReplacedResidue modified +
EntityWithAccessionedSequence modified +
NegativeGeneExpressionRegulation modified +
AbstractModifiedResidue modified +
Regulation modified +
TranscriptionalModification modified +
Polymer modified +
Figure modified +
InteractionEvent modified +
Book modified +
NonsenseMutation modified +
FragmentReplacedModification modified +
EntityFunctionalStatus modified +
IntraChainCrosslinkedResidue modified +
Summation modified +
OtherEntity modified +
_DeletedInstance modified +
ReviewStatus modified +
InstanceEdit modified +
Compartment modified +
ReferenceGeneProduct modified +
Affiliation modified +
Taxon modified +
ReferenceSequence modified +
ReferenceTherapeutic modified +
PsiMod modified +
FunctionalStatus modified +
ProteinDrug modified +
TranslationalModification modified +
ReferenceMolecule modified +
Drug modified +
_Deleted modified +
FragmentModification modified +
RegulationReference modified +
LiteratureReference modified +
SimpleEntity modified +
StableIdentifierReleaseStatus modified +
GO_BiologicalProcess modified +
Cell modified +
StableIdentifierHistory modified +
ReferenceEntity modified +
EntitySet modified +
MarkerReference modified +
PhysicalEntity modified +
ChemicalDrug modified +
InterChainCrosslinkedResidue modified +
NegativePrecedingEvent modified +
PositiveGeneExpressionRegulation modified +
Person modified +
GenomeEncodedEntity modified +
PositiveRegulation modified +
ControlReference modified +
FrontPage modified +
NegativePrecedingEventReason modified +
_UpdateTracker modified +
GO_CellularComponent modified +
FunctionalStatusType modified +
DeletedControlledVocabulary modified +
DrugActionType modified +
PhysicalEntityCellType modified +
CellDevelopmentStep modified +
CellLineagePath modified +
RetractionStatus modified +
ReactionlikeEvent modified +
CatalystActivity modified +
ModifiedResidue modified +
Requirement modified +
ControlledVocabulary modified +
ModifiedNucleotide modified +
DatabaseObject modified +
Depolymerisation modified +
NegativeRegulation modified +
Event modified +
Polymer edited +
CandidateSet edited +
FailedReaction edited +
Pathway edited +
GenomeEncodedEntity edited +
EntityWithAccessionedSequence edited +
ChemicalDrug edited +
EntitySet edited +
OtherEntity edited +
Reaction edited +
Complex edited +
PhysicalEntity edited +
RNADrug edited +
BlackBoxEvent edited +
Depolymerisation edited +
Cell edited +
Event edited +
CellLineagePath edited +
CellDevelopmentStep edited +
SimpleEntity edited +
ReactionlikeEvent edited +
DefinedSet edited +
InteractionEvent edited +
ProteinDrug edited +
Drug edited +
Polymerisation edited +
Event authored +
Depolymerisation authored +
Cell authored 1
SimpleEntity authored 1
ReactionlikeEvent authored +
DefinedSet authored 1
CellLineagePath authored +
CellDevelopmentStep authored +
Polymerisation authored +
Drug authored 1
InteractionEvent authored +
ProteinDrug authored 1
FailedReaction authored +
CandidateSet authored 1
Polymer authored 1
EntityWithAccessionedSequence authored 1
Pathway authored +
GenomeEncodedEntity authored 1
ChemicalDrug authored 1
PhysicalEntity authored 1
RNADrug authored 1
Complex authored 1
BlackBoxEvent authored +
OtherEntity authored 1
EntitySet authored 1
Reaction authored +
_Deleted replacementInstances +
ReferenceGeneProduct created 1
Affiliation created 1
ReviewStatus created 1
_DeletedInstance created 1
OtherEntity created 1
Compartment created 1
InstanceEdit created 1
FunctionalStatus created 1
PsiMod created 1
ReferenceTherapeutic created 1
ReferenceSequence created 1
Taxon created 1
FragmentModification created 1
RegulationReference created 1
SimpleEntity created 1
LiteratureReference created 1
StableIdentifierReleaseStatus created 1
TranslationalModification created 1
ProteinDrug created 1
ReferenceMolecule created 1
_Deleted created 1
Drug created 1
Cell created 1
GO_BiologicalProcess created 1
InterChainCrosslinkedResidue created 1
ChemicalDrug created 1
PositiveGeneExpressionRegulation created 1
NegativePrecedingEvent created 1
MarkerReference created 1
ReferenceEntity created 1
StableIdentifierHistory created 1
EntitySet created 1
PhysicalEntity created 1
_UpdateTracker created 1
NegativePrecedingEventReason created 1
FrontPage created 1
GO_CellularComponent created 1
GenomeEncodedEntity created 1
Person created 1
PositiveRegulation created 1
ControlReference created 1
RetractionStatus created 1
CellLineagePath created 1
CellDevelopmentStep created 1
PhysicalEntityCellType created 1
ReactionlikeEvent created 1
FunctionalStatusType created 1
DrugActionType created 1
DeletedControlledVocabulary created 1
NegativeRegulation created 1
Depolymerisation created 1
Event created 1
CatalystActivity created 1
Requirement created 1
ModifiedResidue created 1
DatabaseObject created 1
ControlledVocabulary created 1
ModifiedNucleotide created 1
ReferenceGroup created 1
GO_MolecularFunction created 1
CrosslinkedResidue created 1
DatabaseIdentifier created 1
PathwayDiagram created 1
Species created 1
CatalystActivityReference created 1
Reaction created 1
BlackBoxEvent created 1
RNADrug created 1
CandidateSet created 1
ReferenceDNASequence created 1
FailedReaction created 1
Pathway created 1
EvidenceType created 1
ReferenceDatabase created 1
CellType created 1
ReferenceRNASequence created 1
_Release created 1
ExternalOntology created 1
DefinedSet created 1
GeneticallyModifiedResidue created 1
StableIdentifier created 1
Disease created 1
Polymerisation created 1
GroupModifiedResidue created 1
URL created 1
ReactionType created 1
SequenceOntology created 1
Publication created 1
FragmentInsertionModification created 1
Anatomy created 1
ReferenceIsoform created 1
Complex created 1
TranscriptionalModification created 1
Regulation created 1
Polymer created 1
AbstractModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
Figure created 1
ReplacedResidue created 1
FragmentDeletionModification created 1
EntityWithAccessionedSequence created 1
Book created 1
NonsenseMutation created 1
InteractionEvent created 1
Summation created 1
FragmentReplacedModification created 1
IntraChainCrosslinkedResidue created 1
EntityFunctionalStatus created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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