Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
DrugActionType created 1
CellDevelopmentStep created 1
FragmentDeletionModification created 1
SequenceOntology created 1
EntitySet created 1
ReactionlikeEvent created 1
Person created 1
ReferenceMolecule created 1
CellLineagePath created 1
RNADrug created 1
ChemicalDrug created 1
_Release created 1
Anatomy created 1
_UpdateTracker created 1
GO_BiologicalProcess created 1
GroupModifiedResidue created 1
Complex created 1
CrosslinkedResidue created 1
OtherEntity created 1
NegativeRegulation created 1
RetractionStatus created 1
Pathway created 1
ReferenceTherapeutic created 1
FragmentModification created 1
FragmentReplacedModification created 1
ReferenceIsoform created 1
ReferenceDatabase created 1
LiteratureReference created 1
GenomeEncodedEntity created 1
NonsenseMutation created 1
PositiveRegulation created 1
MarkerReference created 1
AbstractModifiedResidue created 1
NegativePrecedingEventReason created 1
ReferenceEntity created 1
ReactionType created 1
Summation created 1
ReferenceGeneProduct created 1
Disease created 1
StableIdentifier created 1
EvidenceType created 1
FragmentInsertionModification created 1
_Deleted created 1
ControlReference created 1
ReferenceRNASequence created 1
EntityWithAccessionedSequence created 1
Publication created 1
NegativeGeneExpressionRegulation created 1
GeneticallyModifiedResidue created 1
ReferenceDNASequence created 1
Requirement created 1
ExternalOntology created 1
FunctionalStatusType created 1
CatalystActivity created 1
Regulation created 1
ReferenceSequence created 1
ReviewStatus created 1
Book created 1
PhysicalEntityCellType created 1
Depolymerisation created 1
GO_MolecularFunction created 1
PositiveGeneExpressionRegulation created 1
IntraChainCrosslinkedResidue created 1
Species created 1
ModifiedNucleotide created 1
FrontPage created 1
CatalystActivityReference created 1
Taxon created 1
PathwayDiagram created 1
InterChainCrosslinkedResidue created 1
SimpleEntity created 1
NegativePrecedingEvent created 1
Polymer created 1
ControlledVocabulary created 1
BlackBoxEvent created 1
StableIdentifierReleaseStatus created 1
FunctionalStatus created 1
Polymerisation created 1
StableIdentifierHistory created 1
InstanceEdit created 1
_DeletedInstance created 1
Compartment created 1
ReplacedResidue created 1
PsiMod created 1
Drug created 1
RegulationReference created 1
DatabaseObject created 1
CandidateSet created 1
EntityFunctionalStatus created 1
TranslationalModification created 1
CellType created 1
PhysicalEntity created 1
Event created 1
Figure created 1
DatabaseIdentifier created 1
TranscriptionalModification created 1
DeletedControlledVocabulary created 1
Affiliation created 1
ReferenceGroup created 1
ProteinDrug created 1
GO_CellularComponent created 1
InteractionEvent created 1
FailedReaction created 1
Reaction created 1
URL created 1
ModifiedResidue created 1
Cell created 1
DefinedSet created 1
Complex reviewed +
SimpleEntity reviewed +
OtherEntity reviewed +
Polymer reviewed +
ProteinDrug reviewed +
BlackBoxEvent reviewed +
FailedReaction reviewed +
InteractionEvent reviewed +
Reaction reviewed +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
DefinedSet reviewed +
CellDevelopmentStep reviewed +
Polymerisation reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
GenomeEncodedEntity reviewed +
Drug reviewed +
RNADrug reviewed +
CellLineagePath reviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
PhysicalEntity reviewed +
Event reviewed +
Depolymerisation reviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
ProteinDrug edited +
Polymer edited +
OtherEntity edited +
FailedReaction edited +
InteractionEvent edited +
BlackBoxEvent edited +
Cell edited +
Reaction edited +
DefinedSet edited +
Pathway edited +
EntityWithAccessionedSequence edited +
Complex edited +
SimpleEntity edited +
ChemicalDrug edited +
CellLineagePath edited +
RNADrug edited +
CandidateSet edited +
PhysicalEntity edited +
Event edited +
Depolymerisation edited +
CellDevelopmentStep edited +
Polymerisation edited +
EntitySet edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
Drug edited +
Depolymerisation revised +
PhysicalEntity revised +
Event revised +
CandidateSet revised +
ChemicalDrug revised +
CellLineagePath revised +
RNADrug revised +
Drug revised +
GenomeEncodedEntity revised +
ReactionlikeEvent revised +
EntitySet revised +
Polymerisation revised +
CellDevelopmentStep revised +
DefinedSet revised +
EntityWithAccessionedSequence revised +
Pathway revised +
Cell revised +
Reaction revised +
FailedReaction revised +
InteractionEvent revised +
BlackBoxEvent revised +
ProteinDrug revised +
OtherEntity revised +
Polymer revised +
SimpleEntity revised +
Complex revised +
CandidateSet authored 1
ChemicalDrug authored 1
CellLineagePath authored +
RNADrug authored 1
Depolymerisation authored +
Event authored +
PhysicalEntity authored 1
EntitySet authored 1
Polymerisation authored +
CellDevelopmentStep authored +
Drug authored 1
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
FailedReaction authored +
InteractionEvent authored +
BlackBoxEvent authored +
ProteinDrug authored 1
Polymer authored 1
OtherEntity authored 1
DefinedSet authored 1
Pathway authored +
EntityWithAccessionedSequence authored 1
Cell authored 1
Reaction authored +
Complex authored 1
SimpleEntity authored 1
CellDevelopmentStep structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Depolymerisation structureModified +
Event structureModified +
Reaction structureModified +
GenomeEncodedEntity modified +
LiteratureReference modified +
ReferenceDatabase modified +
ReferenceIsoform modified +
FragmentReplacedModification modified +
NegativePrecedingEventReason modified +
AbstractModifiedResidue modified +
MarkerReference modified +
PositiveRegulation modified +
NonsenseMutation modified +
ReferenceGeneProduct modified +
Summation modified +
ReactionType modified +
ReferenceEntity modified +
Publication modified +
ReferenceRNASequence modified +
EntityWithAccessionedSequence modified +
ControlReference modified +
FragmentInsertionModification modified +
_Deleted modified +
EvidenceType modified +
StableIdentifier modified +
Disease modified +
ReferenceMolecule modified +
Person modified +
ReactionlikeEvent modified +
SequenceOntology modified +
EntitySet modified +
FragmentDeletionModification modified +
CellDevelopmentStep modified +
DrugActionType modified +
GroupModifiedResidue modified +
GO_BiologicalProcess modified +
_UpdateTracker modified +
Anatomy modified +
_Release modified +
ChemicalDrug modified +
RNADrug modified +
CellLineagePath modified +
CrosslinkedResidue modified +
Complex modified +
FragmentModification modified +
ReferenceTherapeutic modified +
Pathway modified +
NegativeRegulation modified +
RetractionStatus modified +
OtherEntity modified +
Drug modified +
RegulationReference modified +
ReplacedResidue modified +
PsiMod modified +
Compartment modified +
_DeletedInstance modified +
InstanceEdit modified +
StableIdentifierHistory modified +
Polymerisation modified +
Figure modified +
PhysicalEntity modified +
Event modified +
EntityFunctionalStatus modified +
CellType modified +
TranslationalModification modified +
CandidateSet modified +
DatabaseObject modified +
ReferenceGroup modified +
Affiliation modified +
DatabaseIdentifier modified +
DeletedControlledVocabulary modified +
TranscriptionalModification modified +
DefinedSet modified +
Cell modified +
ModifiedResidue modified +
Reaction modified +
URL modified +
FailedReaction modified +
GO_CellularComponent modified +
InteractionEvent modified +
ProteinDrug modified +
ExternalOntology modified +
Requirement modified +
ReferenceDNASequence modified +
GeneticallyModifiedResidue modified +
NegativeGeneExpressionRegulation modified +
Depolymerisation modified +
PositiveGeneExpressionRegulation modified +
GO_MolecularFunction modified +
IntraChainCrosslinkedResidue modified +
PhysicalEntityCellType modified +
Book modified +
ReviewStatus modified +
ReferenceSequence modified +
Regulation modified +
CatalystActivity modified +
FunctionalStatusType modified +
SimpleEntity modified +
InterChainCrosslinkedResidue modified +
PathwayDiagram modified +
Taxon modified +
CatalystActivityReference modified +
ModifiedNucleotide modified +
FrontPage modified +
Species modified +
FunctionalStatus modified +
StableIdentifierReleaseStatus modified +
BlackBoxEvent modified +
ControlledVocabulary modified +
NegativePrecedingEvent modified +
Polymer modified +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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