Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InstanceEdit created 1
_UpdateTracker created 1
Compartment created 1
NegativeRegulation created 1
DatabaseObject created 1
GO_CellularComponent created 1
Person created 1
ExternalOntology created 1
Book created 1
FragmentModification created 1
EntitySet created 1
ReferenceDatabase created 1
EntityWithAccessionedSequence created 1
_Release created 1
ModifiedResidue created 1
TranslationalModification created 1
MarkerReference created 1
ReferenceEntity created 1
FragmentReplacedModification created 1
ReferenceDNASequence created 1
URL created 1
ReferenceRNASequence created 1
ModifiedNucleotide created 1
IntraChainCrosslinkedResidue created 1
ReferenceIsoform created 1
TranscriptionalModification created 1
StableIdentifierHistory created 1
RetractionStatus created 1
Event created 1
SimpleEntity created 1
ReferenceGeneProduct created 1
PhysicalEntityCellType created 1
ControlledVocabulary created 1
ControlReference created 1
Drug created 1
Species created 1
FunctionalStatusType created 1
EvidenceType created 1
ProteinDrug created 1
Polymerisation created 1
Regulation created 1
BlackBoxEvent created 1
CellDevelopmentStep created 1
DeletedControlledVocabulary created 1
ReviewStatus created 1
ChemicalDrug created 1
CatalystActivityReference created 1
RNADrug created 1
_DeletedInstance created 1
Pathway created 1
Complex created 1
CatalystActivity created 1
FragmentDeletionModification created 1
NegativePrecedingEvent created 1
Anatomy created 1
EntityFunctionalStatus created 1
PathwayDiagram created 1
NegativePrecedingEventReason created 1
OtherEntity created 1
RegulationReference created 1
ReactionlikeEvent created 1
FunctionalStatus created 1
PhysicalEntity created 1
Cell created 1
DefinedSet created 1
Summation created 1
GroupModifiedResidue created 1
GO_MolecularFunction created 1
Requirement created 1
Taxon created 1
ReferenceGroup created 1
CandidateSet created 1
LiteratureReference created 1
ReferenceTherapeutic created 1
InteractionEvent created 1
Publication created 1
Depolymerisation created 1
AbstractModifiedResidue created 1
PositiveRegulation created 1
Reaction created 1
FragmentInsertionModification created 1
CrosslinkedResidue created 1
FailedReaction created 1
Figure created 1
FrontPage created 1
ReferenceMolecule created 1
StableIdentifier created 1
NonsenseMutation created 1
Disease created 1
ReplacedResidue created 1
DatabaseIdentifier created 1
Polymer created 1
StableIdentifierReleaseStatus created 1
GenomeEncodedEntity created 1
_Deleted created 1
Affiliation created 1
CellType created 1
NegativeGeneExpressionRegulation created 1
PositiveGeneExpressionRegulation created 1
GO_BiologicalProcess created 1
InterChainCrosslinkedResidue created 1
GeneticallyModifiedResidue created 1
CellLineagePath created 1
DrugActionType created 1
ReferenceSequence created 1
SequenceOntology created 1
PsiMod created 1
ReactionType created 1
ReactionlikeEvent modified +
FunctionalStatus modified +
PhysicalEntity modified +
OtherEntity modified +
NegativePrecedingEventReason modified +
RegulationReference modified +
DefinedSet modified +
Summation modified +
Cell modified +
GO_MolecularFunction modified +
Requirement modified +
GroupModifiedResidue modified +
ReferenceTherapeutic modified +
InteractionEvent modified +
Taxon modified +
ReferenceGroup modified +
CandidateSet modified +
LiteratureReference modified +
PositiveRegulation modified +
Reaction modified +
Publication modified +
AbstractModifiedResidue modified +
Depolymerisation modified +
ReferenceMolecule modified +
StableIdentifier modified +
NonsenseMutation modified +
FragmentInsertionModification modified +
CrosslinkedResidue modified +
Figure modified +
FailedReaction modified +
FrontPage modified +
_Deleted modified +
Affiliation modified +
CellType modified +
Polymer modified +
Disease modified +
ReplacedResidue modified +
DatabaseIdentifier modified +
StableIdentifierReleaseStatus modified +
GenomeEncodedEntity modified +
GeneticallyModifiedResidue modified +
CellLineagePath modified +
DrugActionType modified +
SequenceOntology modified +
ReactionType modified +
ReferenceSequence modified +
PsiMod modified +
NegativeGeneExpressionRegulation modified +
PositiveGeneExpressionRegulation modified +
InterChainCrosslinkedResidue modified +
GO_BiologicalProcess modified +
Compartment modified +
NegativeRegulation modified +
DatabaseObject modified +
InstanceEdit modified +
_UpdateTracker modified +
ExternalOntology modified +
Book modified +
GO_CellularComponent modified +
Person modified +
EntitySet modified +
ReferenceDatabase modified +
EntityWithAccessionedSequence modified +
FragmentModification modified +
FragmentReplacedModification modified +
URL modified +
ReferenceDNASequence modified +
ReferenceRNASequence modified +
ModifiedNucleotide modified +
_Release modified +
TranslationalModification modified +
MarkerReference modified +
ReferenceEntity modified +
ModifiedResidue modified +
RetractionStatus modified +
StableIdentifierHistory modified +
ReferenceGeneProduct modified +
Event modified +
SimpleEntity modified +
ControlledVocabulary modified +
PhysicalEntityCellType modified +
IntraChainCrosslinkedResidue modified +
TranscriptionalModification modified +
ReferenceIsoform modified +
Polymerisation modified +
Regulation modified +
BlackBoxEvent modified +
CellDevelopmentStep modified +
Drug modified +
ControlReference modified +
Species modified +
EvidenceType modified +
FunctionalStatusType modified +
ProteinDrug modified +
_DeletedInstance modified +
Pathway modified +
ReviewStatus modified +
DeletedControlledVocabulary modified +
ChemicalDrug modified +
CatalystActivityReference modified +
RNADrug modified +
NegativePrecedingEvent modified +
Anatomy modified +
EntityFunctionalStatus modified +
PathwayDiagram modified +
CatalystActivity modified +
Complex modified +
FragmentDeletionModification modified +
_Deleted replacementInstances +
DefinedSet edited +
Polymerisation edited +
CellDevelopmentStep edited +
BlackBoxEvent edited +
Drug edited +
Cell edited +
FailedReaction edited +
ProteinDrug edited +
ReactionlikeEvent edited +
Reaction edited +
Event edited +
SimpleEntity edited +
PhysicalEntity edited +
OtherEntity edited +
Depolymerisation edited +
CellLineagePath edited +
InteractionEvent edited +
Complex edited +
CandidateSet edited +
EntitySet edited +
EntityWithAccessionedSequence edited +
Pathway edited +
Polymer edited +
ChemicalDrug edited +
GenomeEncodedEntity edited +
RNADrug edited +
Reaction structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
Event structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
OtherEntity reviewed +
Depolymerisation reviewed +
Event reviewed +
SimpleEntity reviewed +
PhysicalEntity reviewed +
ReactionlikeEvent reviewed +
Reaction reviewed +
Cell reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
Drug reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
Polymerisation reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
RNADrug reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
EntitySet reviewed +
CandidateSet reviewed +
Complex reviewed +
InteractionEvent reviewed +
CellLineagePath reviewed +
Pathway internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
EntityWithAccessionedSequence revised +
Pathway revised +
EntitySet revised +
GenomeEncodedEntity revised +
RNADrug revised +
Polymer revised +
ChemicalDrug revised +
InteractionEvent revised +
CellLineagePath revised +
CandidateSet revised +
Complex revised +
SimpleEntity revised +
Event revised +
PhysicalEntity revised +
ReactionlikeEvent revised +
Reaction revised +
Depolymerisation revised +
OtherEntity revised +
CellDevelopmentStep revised +
BlackBoxEvent revised +
DefinedSet revised +
Polymerisation revised +
Cell revised +
FailedReaction revised +
ProteinDrug revised +
Drug revised +
InteractionEvent authored +
CellLineagePath authored +
CandidateSet authored 1
Complex authored 1
Pathway authored +
EntityWithAccessionedSequence authored 1
EntitySet authored 1
GenomeEncodedEntity authored 1
RNADrug authored 1
Polymer authored 1
ChemicalDrug authored 1
BlackBoxEvent authored +
CellDevelopmentStep authored +
Polymerisation authored +
DefinedSet authored 1
Cell authored 1
FailedReaction authored +
ProteinDrug authored 1
Drug authored 1
SimpleEntity authored 1
Event authored +
PhysicalEntity authored 1
ReactionlikeEvent authored +
Reaction authored +
OtherEntity authored 1
Depolymerisation authored +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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