Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReferenceDatabase created 1
SimpleEntity created 1
PathwayDiagram created 1
ReferenceGroup created 1
DatabaseObject created 1
NonsenseMutation created 1
StableIdentifierReleaseStatus created 1
Figure created 1
IntraChainCrosslinkedResidue created 1
GroupModifiedResidue created 1
Reaction created 1
TranscriptionalModification created 1
TranslationalModification created 1
CellType created 1
EntityWithAccessionedSequence created 1
FailedReaction created 1
InterChainCrosslinkedResidue created 1
PhysicalEntity created 1
LiteratureReference created 1
Pathway created 1
SequenceOntology created 1
ReferenceDNASequence created 1
ExternalOntology created 1
CatalystActivity created 1
CellLineagePath created 1
Affiliation created 1
Publication created 1
AbstractModifiedResidue created 1
NegativeRegulation created 1
Event created 1
ReferenceRNASequence created 1
InteractionEvent created 1
Polymer created 1
BlackBoxEvent created 1
URL created 1
StableIdentifier created 1
Taxon created 1
PhysicalEntityCellType created 1
Disease created 1
FragmentModification created 1
Requirement created 1
_Deleted created 1
ModifiedResidue created 1
Summation created 1
Drug created 1
MarkerReference created 1
ChemicalDrug created 1
Polymerisation created 1
_Release created 1
GO_BiologicalProcess created 1
ReferenceIsoform created 1
FrontPage created 1
_DeletedInstance created 1
RetractionStatus created 1
CandidateSet created 1
ReferenceMolecule created 1
ReplacedResidue created 1
NegativeGeneExpressionRegulation created 1
RegulationReference created 1
InstanceEdit created 1
FragmentDeletionModification created 1
ReferenceGeneProduct created 1
_UpdateTracker created 1
CrosslinkedResidue created 1
FunctionalStatus created 1
Depolymerisation created 1
PositiveRegulation created 1
EntityFunctionalStatus created 1
ReactionType created 1
PsiMod created 1
ProteinDrug created 1
DefinedSet created 1
ModifiedNucleotide created 1
FragmentInsertionModification created 1
ControlReference created 1
GenomeEncodedEntity created 1
StableIdentifierHistory created 1
FragmentReplacedModification created 1
NegativePrecedingEvent created 1
Book created 1
ReferenceEntity created 1
NegativePrecedingEventReason created 1
DatabaseIdentifier created 1
EntitySet created 1
ReviewStatus created 1
Anatomy created 1
ReactionlikeEvent created 1
ReferenceSequence created 1
ControlledVocabulary created 1
PositiveGeneExpressionRegulation created 1
ReferenceTherapeutic created 1
CellDevelopmentStep created 1
Species created 1
Person created 1
Compartment created 1
Cell created 1
DeletedControlledVocabulary created 1
GO_CellularComponent created 1
CatalystActivityReference created 1
DrugActionType created 1
Complex created 1
FunctionalStatusType created 1
RNADrug created 1
OtherEntity created 1
GO_MolecularFunction created 1
GeneticallyModifiedResidue created 1
Regulation created 1
EvidenceType created 1
Pathway internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
_Deleted replacementInstances +
BlackBoxEvent modified +
Polymer modified +
URL modified +
Disease modified +
PhysicalEntityCellType modified +
Taxon modified +
StableIdentifier modified +
AbstractModifiedResidue modified +
Publication modified +
NegativeRegulation modified +
ReferenceRNASequence modified +
Event modified +
InteractionEvent modified +
GO_BiologicalProcess modified +
_Release modified +
FrontPage modified +
_DeletedInstance modified +
ReferenceIsoform modified +
ReferenceMolecule modified +
CandidateSet modified +
RetractionStatus modified +
Requirement modified +
FragmentModification modified +
_Deleted modified +
ModifiedResidue modified +
MarkerReference modified +
Summation modified +
Drug modified +
Polymerisation modified +
ChemicalDrug modified +
StableIdentifierReleaseStatus modified +
NonsenseMutation modified +
IntraChainCrosslinkedResidue modified +
Figure modified +
Reaction modified +
GroupModifiedResidue modified +
TranscriptionalModification modified +
SimpleEntity modified +
ReferenceDatabase modified +
ReferenceGroup modified +
PathwayDiagram modified +
DatabaseObject modified +
LiteratureReference modified +
SequenceOntology modified +
ReferenceDNASequence modified +
Pathway modified +
CellLineagePath modified +
Affiliation modified +
ExternalOntology modified +
CatalystActivity modified +
TranslationalModification modified +
FailedReaction modified +
CellType modified +
EntityWithAccessionedSequence modified +
InterChainCrosslinkedResidue modified +
PhysicalEntity modified +
NegativePrecedingEvent modified +
NegativePrecedingEventReason modified +
ReferenceEntity modified +
Book modified +
DatabaseIdentifier modified +
EntitySet modified +
ReviewStatus modified +
StableIdentifierHistory modified +
GenomeEncodedEntity modified +
FragmentReplacedModification modified +
CatalystActivityReference modified +
DrugActionType modified +
DeletedControlledVocabulary modified +
GO_CellularComponent modified +
Complex modified +
FunctionalStatusType modified +
GO_MolecularFunction modified +
OtherEntity modified +
RNADrug modified +
Regulation modified +
GeneticallyModifiedResidue modified +
EvidenceType modified +
ReactionlikeEvent modified +
ReferenceSequence modified +
Anatomy modified +
ReferenceTherapeutic modified +
CellDevelopmentStep modified +
ControlledVocabulary modified +
PositiveGeneExpressionRegulation modified +
Species modified +
Compartment modified +
Person modified +
Cell modified +
_UpdateTracker modified +
CrosslinkedResidue modified +
ReferenceGeneProduct modified +
Depolymerisation modified +
FunctionalStatus modified +
EntityFunctionalStatus modified +
PositiveRegulation modified +
ReactionType modified +
ReplacedResidue modified +
NegativeGeneExpressionRegulation modified +
InstanceEdit modified +
RegulationReference modified +
FragmentDeletionModification modified +
ModifiedNucleotide modified +
ControlReference modified +
FragmentInsertionModification modified +
PsiMod modified +
ProteinDrug modified +
DefinedSet modified +
DefinedSet revised +
Drug revised +
Polymerisation revised +
ChemicalDrug revised +
Cell revised +
PhysicalEntity revised +
ReactionlikeEvent revised +
CellDevelopmentStep revised +
ProteinDrug revised +
FailedReaction revised +
EntityWithAccessionedSequence revised +
RNADrug revised +
OtherEntity revised +
CellLineagePath revised +
CandidateSet revised +
Complex revised +
Pathway revised +
Event revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
SimpleEntity revised +
EntitySet revised +
Reaction revised +
BlackBoxEvent revised +
Polymer revised +
Depolymerisation revised +
RNADrug edited +
OtherEntity edited +
CandidateSet edited +
CellLineagePath edited +
Pathway edited +
Complex edited +
Drug edited +
DefinedSet edited +
PhysicalEntity edited +
Cell edited +
Polymerisation edited +
ChemicalDrug edited +
ReactionlikeEvent edited +
EntityWithAccessionedSequence edited +
FailedReaction edited +
ProteinDrug edited +
CellDevelopmentStep edited +
EntitySet edited +
Reaction edited +
Polymer edited +
BlackBoxEvent edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
Event edited +
InteractionEvent edited +
SimpleEntity edited +
SimpleEntity reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
Depolymerisation reviewed +
Reaction reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
CellDevelopmentStep reviewed +
EntityWithAccessionedSequence reviewed +
DefinedSet reviewed +
Drug reviewed +
Cell reviewed +
Polymerisation reviewed +
ChemicalDrug reviewed +
PhysicalEntity reviewed +
Complex reviewed +
Pathway reviewed +
RNADrug reviewed +
OtherEntity reviewed +
CellLineagePath reviewed +
CandidateSet reviewed +
ReactionlikeEvent authored +
ProteinDrug authored 1
CellDevelopmentStep authored +
FailedReaction authored +
EntityWithAccessionedSequence authored 1
DefinedSet authored 1
Drug authored 1
Cell authored 1
Polymerisation authored +
ChemicalDrug authored 1
PhysicalEntity authored 1
Complex authored 1
Pathway authored +
OtherEntity authored 1
RNADrug authored 1
CellLineagePath authored +
CandidateSet authored 1
SimpleEntity authored 1
Event authored +
GenomeEncodedEntity authored 1
InteractionEvent authored +
BlackBoxEvent authored +
Polymer authored 1
Depolymerisation authored +
EntitySet authored 1
Reaction authored +
Polymerisation structureModified +
InteractionEvent structureModified +
Event structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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