Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
DrugActionType created 1
StableIdentifierHistory created 1
InstanceEdit created 1
Compartment created 1
_UpdateTracker created 1
ExternalOntology created 1
OtherEntity created 1
ReferenceGeneProduct created 1
CatalystActivityReference created 1
TranslationalModification created 1
DatabaseObject created 1
Regulation created 1
PositiveRegulation created 1
EvidenceType created 1
Polymerisation created 1
ReferenceRNASequence created 1
Anatomy created 1
ReferenceMolecule created 1
SequenceOntology created 1
CellType created 1
InterChainCrosslinkedResidue created 1
ReferenceIsoform created 1
PhysicalEntityCellType created 1
MarkerReference created 1
CatalystActivity created 1
Cell created 1
PositiveGeneExpressionRegulation created 1
RetractionStatus created 1
ModifiedResidue created 1
Reaction created 1
EntitySet created 1
DatabaseIdentifier created 1
Species created 1
GeneticallyModifiedResidue created 1
StableIdentifier created 1
NegativePrecedingEvent created 1
_Deleted created 1
ReviewStatus created 1
TranscriptionalModification created 1
Complex created 1
FunctionalStatusType created 1
NegativeRegulation created 1
Disease created 1
DefinedSet created 1
PathwayDiagram created 1
FragmentDeletionModification created 1
Pathway created 1
LiteratureReference created 1
ControlledVocabulary created 1
DeletedControlledVocabulary created 1
GenomeEncodedEntity created 1
InteractionEvent created 1
ChemicalDrug created 1
Publication created 1
EntityFunctionalStatus created 1
NonsenseMutation created 1
FragmentReplacedModification created 1
FailedReaction created 1
StableIdentifierReleaseStatus created 1
IntraChainCrosslinkedResidue created 1
ReferenceEntity created 1
CellLineagePath created 1
ProteinDrug created 1
Affiliation created 1
Event created 1
Figure created 1
FragmentInsertionModification created 1
ReactionlikeEvent created 1
FrontPage created 1
CandidateSet created 1
_Release created 1
RNADrug created 1
ReferenceSequence created 1
Book created 1
GroupModifiedResidue created 1
FunctionalStatus created 1
FragmentModification created 1
NegativePrecedingEventReason created 1
ReferenceTherapeutic created 1
NegativeGeneExpressionRegulation created 1
ReferenceGroup created 1
SimpleEntity created 1
ControlReference created 1
Person created 1
Drug created 1
Requirement created 1
Depolymerisation created 1
ReferenceDNASequence created 1
CrosslinkedResidue created 1
GO_BiologicalProcess created 1
ReplacedResidue created 1
Taxon created 1
PsiMod created 1
GO_MolecularFunction created 1
URL created 1
ModifiedNucleotide created 1
_DeletedInstance created 1
CellDevelopmentStep created 1
AbstractModifiedResidue created 1
RegulationReference created 1
Polymer created 1
Summation created 1
GO_CellularComponent created 1
EntityWithAccessionedSequence created 1
PhysicalEntity created 1
ReferenceDatabase created 1
BlackBoxEvent created 1
ReactionType created 1
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
Reaction structureModified +
Event structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
BlackBoxEvent revised +
EntitySet revised +
FailedReaction revised +
Reaction revised +
PhysicalEntity revised +
RNADrug revised +
ChemicalDrug revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
Cell revised +
Polymer revised +
CandidateSet revised +
Pathway revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
DefinedSet revised +
Event revised +
Polymerisation revised +
Complex revised +
OtherEntity revised +
ProteinDrug revised +
Depolymerisation revised +
Drug revised +
SimpleEntity revised +
CellLineagePath revised +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
Complex reviewed +
Polymerisation reviewed +
Event reviewed +
Drug reviewed +
Depolymerisation reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
Reaction reviewed +
EntitySet reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
Cell reviewed +
ChemicalDrug reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
EntityWithAccessionedSequence reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
Pathway reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
DefinedSet authored 1
CellDevelopmentStep authored +
ReactionlikeEvent authored +
Pathway authored +
CandidateSet authored 1
Polymer authored 1
Cell authored 1
InteractionEvent authored +
GenomeEncodedEntity authored 1
ChemicalDrug authored 1
EntityWithAccessionedSequence authored 1
RNADrug authored 1
PhysicalEntity authored 1
EntitySet authored 1
FailedReaction authored +
Reaction authored +
BlackBoxEvent authored +
CellLineagePath authored +
SimpleEntity authored 1
Drug authored 1
Depolymerisation authored +
ProteinDrug authored 1
OtherEntity authored 1
Complex authored 1
Polymerisation authored +
Event authored +
_Deleted replacementInstances +
PositiveGeneExpressionRegulation modified +
Cell modified +
DatabaseIdentifier modified +
Species modified +
EntitySet modified +
Reaction modified +
ModifiedResidue modified +
RetractionStatus modified +
InterChainCrosslinkedResidue modified +
CellType modified +
SequenceOntology modified +
ReferenceMolecule modified +
CatalystActivity modified +
MarkerReference modified +
PhysicalEntityCellType modified +
ReferenceIsoform modified +
PositiveRegulation modified +
CatalystActivityReference modified +
TranslationalModification modified +
DatabaseObject modified +
Regulation modified +
ReferenceGeneProduct modified +
Anatomy modified +
Polymerisation modified +
EvidenceType modified +
ReferenceRNASequence modified +
InstanceEdit modified +
StableIdentifierHistory modified +
DrugActionType modified +
OtherEntity modified +
ExternalOntology modified +
_UpdateTracker modified +
Compartment modified +
Publication modified +
GenomeEncodedEntity modified +
ChemicalDrug modified +
InteractionEvent modified +
FailedReaction modified +
StableIdentifierReleaseStatus modified +
FragmentReplacedModification modified +
NonsenseMutation modified +
EntityFunctionalStatus modified +
FragmentDeletionModification modified +
DefinedSet modified +
PathwayDiagram modified +
DeletedControlledVocabulary modified +
ControlledVocabulary modified +
LiteratureReference modified +
Pathway modified +
ReviewStatus modified +
Disease modified +
NegativeRegulation modified +
FunctionalStatusType modified +
Complex modified +
TranscriptionalModification modified +
_Deleted modified +
NegativePrecedingEvent modified +
StableIdentifier modified +
GeneticallyModifiedResidue modified +
_Release modified +
Book modified +
GroupModifiedResidue modified +
ReferenceSequence modified +
RNADrug modified +
FragmentInsertionModification modified +
Figure modified +
CandidateSet modified +
FrontPage modified +
ReactionlikeEvent modified +
Event modified +
Affiliation modified +
CellLineagePath modified +
ReferenceEntity modified +
IntraChainCrosslinkedResidue modified +
ProteinDrug modified +
EntityWithAccessionedSequence modified +
GO_CellularComponent modified +
Summation modified +
Polymer modified +
ReactionType modified +
BlackBoxEvent modified +
ReferenceDatabase modified +
PhysicalEntity modified +
URL modified +
AbstractModifiedResidue modified +
RegulationReference modified +
ModifiedNucleotide modified +
CellDevelopmentStep modified +
_DeletedInstance modified +
ReplacedResidue modified +
GO_BiologicalProcess modified +
GO_MolecularFunction modified +
PsiMod modified +
Taxon modified +
ReferenceGroup modified +
SimpleEntity modified +
NegativeGeneExpressionRegulation modified +
ReferenceTherapeutic modified +
FunctionalStatus modified +
FragmentModification modified +
NegativePrecedingEventReason modified +
CrosslinkedResidue modified +
ReferenceDNASequence modified +
Requirement modified +
Depolymerisation modified +
Drug modified +
Person modified +
ControlReference modified +
DefinedSet edited +
CandidateSet edited +
Pathway edited +
CellDevelopmentStep edited +
ReactionlikeEvent edited +
ChemicalDrug edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
EntityWithAccessionedSequence edited +
Cell edited +
Polymer edited +
BlackBoxEvent edited +
Reaction edited +
FailedReaction edited +
EntitySet edited +
PhysicalEntity edited +
RNADrug edited +
SimpleEntity edited +
CellLineagePath edited +
ProteinDrug edited +
OtherEntity edited +
Depolymerisation edited +
Drug edited +
Event edited +
Polymerisation edited +
Complex edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

Follow Reactome