Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Drug created 1
FrontPage created 1
GroupModifiedResidue created 1
CatalystActivityReference created 1
AbstractModifiedResidue created 1
ExternalOntology created 1
Affiliation created 1
Polymerisation created 1
NegativeRegulation created 1
GO_BiologicalProcess created 1
Taxon created 1
URL created 1
Reaction created 1
Compartment created 1
Depolymerisation created 1
PhysicalEntityCellType created 1
ReferenceDNASequence created 1
Regulation created 1
StableIdentifier created 1
StableIdentifierReleaseStatus created 1
_DeletedInstance created 1
NonsenseMutation created 1
Polymer created 1
InterChainCrosslinkedResidue created 1
Requirement created 1
IntraChainCrosslinkedResidue created 1
_Release created 1
FunctionalStatusType created 1
FragmentReplacedModification created 1
DefinedSet created 1
StableIdentifierHistory created 1
PathwayDiagram created 1
EntityFunctionalStatus created 1
ModifiedResidue created 1
ReferenceEntity created 1
PositiveRegulation created 1
CatalystActivity created 1
DatabaseObject created 1
ReferenceSequence created 1
ReactionlikeEvent created 1
OtherEntity created 1
ReferenceRNASequence created 1
BlackBoxEvent created 1
PhysicalEntity created 1
ReferenceGroup created 1
DatabaseIdentifier created 1
Pathway created 1
ReferenceGeneProduct created 1
EntitySet created 1
ReferenceIsoform created 1
EntityWithAccessionedSequence created 1
ProteinDrug created 1
RegulationReference created 1
InteractionEvent created 1
ChemicalDrug created 1
ReferenceMolecule created 1
Summation created 1
GO_MolecularFunction created 1
DrugActionType created 1
CellType created 1
CrosslinkedResidue created 1
FailedReaction created 1
LiteratureReference created 1
RetractionStatus created 1
NegativePrecedingEvent created 1
Anatomy created 1
Person created 1
FragmentDeletionModification created 1
GenomeEncodedEntity created 1
NegativePrecedingEventReason created 1
Event created 1
TranslationalModification created 1
ReviewStatus created 1
ReplacedResidue created 1
ReferenceTherapeutic created 1
Species created 1
PositiveGeneExpressionRegulation created 1
_Deleted created 1
GeneticallyModifiedResidue created 1
Complex created 1
CandidateSet created 1
FunctionalStatus created 1
DeletedControlledVocabulary created 1
SequenceOntology created 1
RNADrug created 1
CellDevelopmentStep created 1
FragmentModification created 1
Cell created 1
SimpleEntity created 1
ReactionType created 1
InstanceEdit created 1
Publication created 1
Figure created 1
Book created 1
MarkerReference created 1
Disease created 1
CellLineagePath created 1
ControlledVocabulary created 1
_UpdateTracker created 1
ReferenceDatabase created 1
TranscriptionalModification created 1
EvidenceType created 1
GO_CellularComponent created 1
NegativeGeneExpressionRegulation created 1
FragmentInsertionModification created 1
ModifiedNucleotide created 1
ControlReference created 1
PsiMod created 1
_Deleted replacementInstances +
FailedReaction internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
Polymer revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
InteractionEvent revised +
ChemicalDrug revised +
DefinedSet revised +
BlackBoxEvent revised +
Reaction revised +
SimpleEntity revised +
PhysicalEntity revised +
CellLineagePath revised +
Pathway revised +
Depolymerisation revised +
EntitySet revised +
RNADrug revised +
GenomeEncodedEntity revised +
Polymerisation revised +
CellDevelopmentStep revised +
Event revised +
OtherEntity revised +
ReactionlikeEvent revised +
Cell revised +
Drug revised +
Complex revised +
FailedReaction revised +
CandidateSet revised +
CellLineagePath structureModified +
Pathway structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
CellDevelopmentStep edited +
Event edited +
OtherEntity edited +
Cell edited +
ReactionlikeEvent edited +
RNADrug edited +
GenomeEncodedEntity edited +
Polymerisation edited +
CandidateSet edited +
Drug edited +
FailedReaction edited +
Complex edited +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
ChemicalDrug edited +
InteractionEvent edited +
DefinedSet edited +
Polymer edited +
Pathway edited +
CellLineagePath edited +
Depolymerisation edited +
EntitySet edited +
BlackBoxEvent edited +
Reaction edited +
SimpleEntity edited +
PhysicalEntity edited +
URL modified +
Taxon modified +
GO_BiologicalProcess modified +
NegativeRegulation modified +
Affiliation modified +
Polymerisation modified +
ExternalOntology modified +
AbstractModifiedResidue modified +
CatalystActivityReference modified +
Drug modified +
FrontPage modified +
GroupModifiedResidue modified +
DefinedSet modified +
FragmentReplacedModification modified +
FunctionalStatusType modified +
_Release modified +
IntraChainCrosslinkedResidue modified +
Requirement modified +
InterChainCrosslinkedResidue modified +
Polymer modified +
_DeletedInstance modified +
NonsenseMutation modified +
StableIdentifierReleaseStatus modified +
StableIdentifier modified +
PhysicalEntityCellType modified +
ReferenceDNASequence modified +
Regulation modified +
Depolymerisation modified +
Compartment modified +
Reaction modified +
OtherEntity modified +
ReactionlikeEvent modified +
CatalystActivity modified +
ReferenceSequence modified +
DatabaseObject modified +
PositiveRegulation modified +
ReferenceEntity modified +
ModifiedResidue modified +
EntityFunctionalStatus modified +
PathwayDiagram modified +
StableIdentifierHistory modified +
ReferenceMolecule modified +
Summation modified +
RegulationReference modified +
ProteinDrug modified +
EntityWithAccessionedSequence modified +
ChemicalDrug modified +
InteractionEvent modified +
ReferenceIsoform modified +
EntitySet modified +
ReferenceGeneProduct modified +
Pathway modified +
DatabaseIdentifier modified +
ReferenceGroup modified +
PhysicalEntity modified +
ReferenceRNASequence modified +
BlackBoxEvent modified +
TranslationalModification modified +
Event modified +
NegativePrecedingEventReason modified +
GenomeEncodedEntity modified +
FragmentDeletionModification modified +
Person modified +
Anatomy modified +
NegativePrecedingEvent modified +
LiteratureReference modified +
RetractionStatus modified +
CrosslinkedResidue modified +
FailedReaction modified +
CellType modified +
DrugActionType modified +
GO_MolecularFunction modified +
PositiveGeneExpressionRegulation modified +
Species modified +
ReferenceTherapeutic modified +
ReplacedResidue modified +
ReviewStatus modified +
Cell modified +
CellDevelopmentStep modified +
FragmentModification modified +
RNADrug modified +
DeletedControlledVocabulary modified +
SequenceOntology modified +
FunctionalStatus modified +
CandidateSet modified +
Complex modified +
GeneticallyModifiedResidue modified +
_Deleted modified +
ModifiedNucleotide modified +
PsiMod modified +
ControlReference modified +
FragmentInsertionModification modified +
NegativeGeneExpressionRegulation modified +
GO_CellularComponent modified +
EvidenceType modified +
TranscriptionalModification modified +
ReferenceDatabase modified +
_UpdateTracker modified +
ControlledVocabulary modified +
Disease modified +
Book modified +
MarkerReference modified +
CellLineagePath modified +
Figure modified +
Publication modified +
InstanceEdit modified +
SimpleEntity modified +
ReactionType modified +
CellDevelopmentStep authored +
Cell authored 1
OtherEntity authored 1
ReactionlikeEvent authored +
Event authored +
Polymerisation authored +
RNADrug authored 1
GenomeEncodedEntity authored 1
CandidateSet authored 1
Drug authored 1
Complex authored 1
FailedReaction authored +
EntityWithAccessionedSequence authored 1
ProteinDrug authored 1
ChemicalDrug authored 1
InteractionEvent authored +
DefinedSet authored 1
Polymer authored 1
Depolymerisation authored +
CellLineagePath authored +
Pathway authored +
EntitySet authored 1
SimpleEntity authored 1
Reaction authored +
BlackBoxEvent authored +
PhysicalEntity authored 1
SimpleEntity reviewed +
BlackBoxEvent reviewed +
Reaction reviewed +
PhysicalEntity reviewed +
Depolymerisation reviewed +
CellLineagePath reviewed +
Pathway reviewed +
EntitySet reviewed +
Polymer reviewed +
EntityWithAccessionedSequence reviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
InteractionEvent reviewed +
DefinedSet reviewed +
Drug reviewed +
FailedReaction reviewed +
Complex reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
GenomeEncodedEntity reviewed +
RNADrug reviewed +
CellDevelopmentStep reviewed +
OtherEntity reviewed +
Cell reviewed +
ReactionlikeEvent reviewed +
Event reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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