Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Depolymerisation structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
Reaction structureModified +
CellLineagePath structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
Cell authored 1
Depolymerisation authored +
SimpleEntity authored 1
ChemicalDrug authored 1
PhysicalEntity authored 1
FailedReaction authored +
GenomeEncodedEntity authored 1
ProteinDrug authored 1
Polymerisation authored +
OtherEntity authored 1
ReactionlikeEvent authored +
Reaction authored +
EntitySet authored 1
CandidateSet authored 1
Drug authored 1
Pathway authored +
RNADrug authored 1
BlackBoxEvent authored +
EntityWithAccessionedSequence authored 1
DefinedSet authored 1
InteractionEvent authored +
CellLineagePath authored +
Event authored +
Polymer authored 1
CellDevelopmentStep authored +
Complex authored 1
ReferenceEntity created 1
PositiveGeneExpressionRegulation created 1
CellLineagePath created 1
Event created 1
GeneticallyModifiedResidue created 1
Regulation created 1
ModifiedResidue created 1
DatabaseIdentifier created 1
_Deleted created 1
InstanceEdit created 1
PathwayDiagram created 1
FrontPage created 1
RegulationReference created 1
CandidateSet created 1
ReactionType created 1
ControlledVocabulary created 1
EntitySet created 1
Affiliation created 1
PositiveRegulation created 1
PsiMod created 1
CrosslinkedResidue created 1
Reaction created 1
OtherEntity created 1
ProteinDrug created 1
PhysicalEntity created 1
GenomeEncodedEntity created 1
Person created 1
ReferenceRNASequence created 1
DatabaseObject created 1
NegativeGeneExpressionRegulation created 1
SequenceOntology created 1
NegativePrecedingEventReason created 1
GO_MolecularFunction created 1
TranscriptionalModification created 1
CatalystActivity created 1
ReferenceGeneProduct created 1
GO_BiologicalProcess created 1
MarkerReference created 1
RNADrug created 1
ReferenceMolecule created 1
LiteratureReference created 1
Drug created 1
GO_CellularComponent created 1
RetractionStatus created 1
ReferenceTherapeutic created 1
ReferenceGroup created 1
ReplacedResidue created 1
TranslationalModification created 1
ReactionlikeEvent created 1
ModifiedNucleotide created 1
NegativeRegulation created 1
Anatomy created 1
PhysicalEntityCellType created 1
InterChainCrosslinkedResidue created 1
FunctionalStatus created 1
FragmentInsertionModification created 1
ControlReference created 1
Complex created 1
StableIdentifier created 1
GroupModifiedResidue created 1
Polymer created 1
ReferenceSequence created 1
Disease created 1
DefinedSet created 1
EntityWithAccessionedSequence created 1
InteractionEvent created 1
StableIdentifierHistory created 1
FragmentDeletionModification created 1
Publication created 1
CellType created 1
Pathway created 1
URL created 1
_Release created 1
FunctionalStatusType created 1
Species created 1
Book created 1
IntraChainCrosslinkedResidue created 1
DrugActionType created 1
FragmentReplacedModification created 1
Polymerisation created 1
Taxon created 1
StableIdentifierReleaseStatus created 1
_DeletedInstance created 1
Cell created 1
Depolymerisation created 1
EvidenceType created 1
CellDevelopmentStep created 1
ReferenceDatabase created 1
ReviewStatus created 1
CatalystActivityReference created 1
NegativePrecedingEvent created 1
DeletedControlledVocabulary created 1
BlackBoxEvent created 1
Compartment created 1
AbstractModifiedResidue created 1
EntityFunctionalStatus created 1
ReferenceIsoform created 1
ExternalOntology created 1
Summation created 1
_UpdateTracker created 1
Figure created 1
ReferenceDNASequence created 1
FailedReaction created 1
ChemicalDrug created 1
Requirement created 1
NonsenseMutation created 1
SimpleEntity created 1
FragmentModification created 1
Event reviewed +
CellLineagePath reviewed +
Complex reviewed +
Polymer reviewed +
CellDevelopmentStep reviewed +
Drug reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
InteractionEvent reviewed +
DefinedSet reviewed +
RNADrug reviewed +
BlackBoxEvent reviewed +
EntitySet reviewed +
Reaction reviewed +
CandidateSet reviewed +
ChemicalDrug reviewed +
Cell reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
Polymerisation reviewed +
OtherEntity reviewed +
ReactionlikeEvent reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
GenomeEncodedEntity reviewed +
ProteinDrug reviewed +
Reaction edited +
EntitySet edited +
CandidateSet edited +
SimpleEntity edited +
Cell edited +
Depolymerisation edited +
ChemicalDrug edited +
ProteinDrug edited +
FailedReaction edited +
PhysicalEntity edited +
GenomeEncodedEntity edited +
OtherEntity edited +
Polymerisation edited +
ReactionlikeEvent edited +
Event edited +
CellLineagePath edited +
CellDevelopmentStep edited +
Polymer edited +
Complex edited +
Pathway edited +
Drug edited +
BlackBoxEvent edited +
RNADrug edited +
EntityWithAccessionedSequence edited +
InteractionEvent edited +
DefinedSet edited +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
_Deleted replacementInstances +
BlackBoxEvent revised +
RNADrug revised +
DefinedSet revised +
EntityWithAccessionedSequence revised +
InteractionEvent revised +
Pathway revised +
Drug revised +
CellDevelopmentStep revised +
Polymer revised +
Complex revised +
Event revised +
CellLineagePath revised +
ProteinDrug revised +
FailedReaction revised +
PhysicalEntity revised +
GenomeEncodedEntity revised +
Polymerisation revised +
ReactionlikeEvent revised +
OtherEntity revised +
SimpleEntity revised +
Depolymerisation revised +
Cell revised +
ChemicalDrug revised +
CandidateSet revised +
Reaction revised +
EntitySet revised +
FunctionalStatusType modified +
_Release modified +
CellType modified +
Publication modified +
FragmentDeletionModification modified +
URL modified +
Pathway modified +
StableIdentifierHistory modified +
EntityWithAccessionedSequence modified +
Disease modified +
InteractionEvent modified +
DefinedSet modified +
Polymer modified +
ReferenceSequence modified +
GroupModifiedResidue modified +
StableIdentifier modified +
Complex modified +
ControlReference modified +
Cell modified +
Depolymerisation modified +
_DeletedInstance modified +
StableIdentifierReleaseStatus modified +
Taxon modified +
Polymerisation modified +
DrugActionType modified +
FragmentReplacedModification modified +
IntraChainCrosslinkedResidue modified +
Book modified +
Species modified +
AbstractModifiedResidue modified +
Compartment modified +
DeletedControlledVocabulary modified +
BlackBoxEvent modified +
NegativePrecedingEvent modified +
CatalystActivityReference modified +
ReviewStatus modified +
ReferenceDatabase modified +
CellDevelopmentStep modified +
EvidenceType modified +
FragmentModification modified +
NonsenseMutation modified +
Requirement modified +
SimpleEntity modified +
ChemicalDrug modified +
FailedReaction modified +
ReferenceDNASequence modified +
Figure modified +
_UpdateTracker modified +
Summation modified +
ExternalOntology modified +
ReferenceIsoform modified +
EntityFunctionalStatus modified +
InstanceEdit modified +
_Deleted modified +
DatabaseIdentifier modified +
ModifiedResidue modified +
Regulation modified +
CellLineagePath modified +
Event modified +
GeneticallyModifiedResidue modified +
PositiveGeneExpressionRegulation modified +
ReferenceEntity modified +
NegativeGeneExpressionRegulation modified +
DatabaseObject modified +
ReferenceRNASequence modified +
GenomeEncodedEntity modified +
PhysicalEntity modified +
Person modified +
ProteinDrug modified +
OtherEntity modified +
PsiMod modified +
Reaction modified +
CrosslinkedResidue modified +
PositiveRegulation modified +
Affiliation modified +
EntitySet modified +
ReactionType modified +
CandidateSet modified +
ControlledVocabulary modified +
RegulationReference modified +
FrontPage modified +
PathwayDiagram modified +
LiteratureReference modified +
ReferenceMolecule modified +
Drug modified +
RNADrug modified +
MarkerReference modified +
ReferenceGeneProduct modified +
GO_BiologicalProcess modified +
CatalystActivity modified +
TranscriptionalModification modified +
GO_MolecularFunction modified +
NegativePrecedingEventReason modified +
SequenceOntology modified +
FragmentInsertionModification modified +
FunctionalStatus modified +
InterChainCrosslinkedResidue modified +
Anatomy modified +
PhysicalEntityCellType modified +
NegativeRegulation modified +
ModifiedNucleotide modified +
ReactionlikeEvent modified +
TranslationalModification modified +
ReferenceGroup modified +
ReplacedResidue modified +
ReferenceTherapeutic modified +
RetractionStatus modified +
GO_CellularComponent modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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