Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionType modified +
Book modified +
Complex modified +
BlackBoxEvent modified +
NegativePrecedingEventReason modified +
GO_MolecularFunction modified +
PositiveGeneExpressionRegulation modified +
StableIdentifierReleaseStatus modified +
FailedReaction modified +
DeletedControlledVocabulary modified +
GO_CellularComponent modified +
Polymer modified +
Disease modified +
NegativeGeneExpressionRegulation modified +
GO_BiologicalProcess modified +
_DeletedInstance modified +
PsiMod modified +
ReplacedResidue modified +
ReferenceSequence modified +
URL modified +
GenomeEncodedEntity modified +
Compartment modified +
CellLineagePath modified +
ExternalOntology modified +
TranscriptionalModification modified +
ReferenceGroup modified +
ReferenceEntity modified +
PhysicalEntity modified +
ReactionlikeEvent modified +
TranslationalModification modified +
InterChainCrosslinkedResidue modified +
Anatomy modified +
CatalystActivity modified +
Cell modified +
IntraChainCrosslinkedResidue modified +
AbstractModifiedResidue modified +
PositiveRegulation modified +
ModifiedNucleotide modified +
Taxon modified +
ReferenceDNASequence modified +
ControlledVocabulary modified +
LiteratureReference modified +
NegativePrecedingEvent modified +
ChemicalDrug modified +
MarkerReference modified +
GeneticallyModifiedResidue modified +
CandidateSet modified +
CrosslinkedResidue modified +
ControlReference modified +
DatabaseIdentifier modified +
ReferenceIsoform modified +
_Release modified +
FragmentReplacedModification modified +
FragmentModification modified +
DefinedSet modified +
FunctionalStatusType modified +
ReferenceRNASequence modified +
Person modified +
StableIdentifier modified +
RetractionStatus modified +
Affiliation modified +
ReferenceGeneProduct modified +
EntitySet modified +
Depolymerisation modified +
Regulation modified +
PathwayDiagram modified +
EntityFunctionalStatus modified +
Publication modified +
OtherEntity modified +
Drug modified +
CellType modified +
Event modified +
Pathway modified +
InteractionEvent modified +
ReviewStatus modified +
Requirement modified +
_Deleted modified +
NegativeRegulation modified +
NonsenseMutation modified +
DrugActionType modified +
SimpleEntity modified +
RNADrug modified +
InstanceEdit modified +
GroupModifiedResidue modified +
CellDevelopmentStep modified +
Reaction modified +
FrontPage modified +
RegulationReference modified +
ReferenceMolecule modified +
ReferenceDatabase modified +
CatalystActivityReference modified +
EntityWithAccessionedSequence modified +
Figure modified +
Polymerisation modified +
EvidenceType modified +
DatabaseObject modified +
Species modified +
ProteinDrug modified +
FunctionalStatus modified +
ModifiedResidue modified +
ReferenceTherapeutic modified +
FragmentDeletionModification modified +
_UpdateTracker modified +
Summation modified +
StableIdentifierHistory modified +
FragmentInsertionModification modified +
PhysicalEntityCellType modified +
SequenceOntology modified +
RNADrug reviewed +
SimpleEntity reviewed +
GenomeEncodedEntity reviewed +
DefinedSet reviewed +
CellLineagePath reviewed +
InteractionEvent reviewed +
Pathway reviewed +
CandidateSet reviewed +
ChemicalDrug reviewed +
Event reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
Drug reviewed +
FailedReaction reviewed +
EntityWithAccessionedSequence reviewed +
Polymerisation reviewed +
Polymer reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
Cell reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
PhysicalEntity reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
Reaction reviewed +
Disease created 1
NegativeGeneExpressionRegulation created 1
GO_BiologicalProcess created 1
_DeletedInstance created 1
PsiMod created 1
StableIdentifierReleaseStatus created 1
FailedReaction created 1
DeletedControlledVocabulary created 1
GO_CellularComponent created 1
Polymer created 1
BlackBoxEvent created 1
NegativePrecedingEventReason created 1
GO_MolecularFunction created 1
PositiveGeneExpressionRegulation created 1
ReactionType created 1
Book created 1
Complex created 1
ReferenceGroup created 1
ReferenceEntity created 1
GenomeEncodedEntity created 1
Compartment created 1
TranscriptionalModification created 1
CellLineagePath created 1
ExternalOntology created 1
ReferenceSequence created 1
URL created 1
ReplacedResidue created 1
NegativePrecedingEvent created 1
PositiveRegulation created 1
AbstractModifiedResidue created 1
IntraChainCrosslinkedResidue created 1
Taxon created 1
ModifiedNucleotide created 1
ReferenceDNASequence created 1
ControlledVocabulary created 1
LiteratureReference created 1
InterChainCrosslinkedResidue created 1
Anatomy created 1
CatalystActivity created 1
Cell created 1
TranslationalModification created 1
ReactionlikeEvent created 1
PhysicalEntity created 1
ReferenceRNASequence created 1
Person created 1
StableIdentifier created 1
_Release created 1
FragmentReplacedModification created 1
FragmentModification created 1
DefinedSet created 1
FunctionalStatusType created 1
ControlReference created 1
DatabaseIdentifier created 1
ReferenceIsoform created 1
ChemicalDrug created 1
CandidateSet created 1
MarkerReference created 1
GeneticallyModifiedResidue created 1
CrosslinkedResidue created 1
Publication created 1
Drug created 1
OtherEntity created 1
EntityFunctionalStatus created 1
Depolymerisation created 1
PathwayDiagram created 1
Regulation created 1
Affiliation created 1
RetractionStatus created 1
ReferenceGeneProduct created 1
EntitySet created 1
SimpleEntity created 1
RNADrug created 1
InstanceEdit created 1
DrugActionType created 1
NonsenseMutation created 1
Pathway created 1
InteractionEvent created 1
Requirement created 1
ReviewStatus created 1
NegativeRegulation created 1
_Deleted created 1
Event created 1
CellType created 1
Species created 1
FunctionalStatus created 1
ProteinDrug created 1
EntityWithAccessionedSequence created 1
Figure created 1
DatabaseObject created 1
Polymerisation created 1
EvidenceType created 1
RegulationReference created 1
FrontPage created 1
ReferenceMolecule created 1
ReferenceDatabase created 1
CatalystActivityReference created 1
GroupModifiedResidue created 1
CellDevelopmentStep created 1
Reaction created 1
StableIdentifierHistory created 1
FragmentInsertionModification created 1
SequenceOntology created 1
PhysicalEntityCellType created 1
Summation created 1
FragmentDeletionModification created 1
_UpdateTracker created 1
ModifiedResidue created 1
ReferenceTherapeutic created 1
ChemicalDrug edited +
CandidateSet edited +
Event edited +
InteractionEvent edited +
Pathway edited +
GenomeEncodedEntity edited +
DefinedSet edited +
CellLineagePath edited +
SimpleEntity edited +
RNADrug edited +
CellDevelopmentStep edited +
Reaction edited +
EntitySet edited +
PhysicalEntity edited +
ReactionlikeEvent edited +
Complex edited +
BlackBoxEvent edited +
Depolymerisation edited +
Cell edited +
EntityWithAccessionedSequence edited +
FailedReaction edited +
Polymer edited +
Polymerisation edited +
ProteinDrug edited +
OtherEntity edited +
Drug edited +
_Deleted replacementInstances +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction structureModified +
CellDevelopmentStep structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
Pathway structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
Polymer authored 1
Polymerisation authored +
EntityWithAccessionedSequence authored 1
FailedReaction authored +
ProteinDrug authored 1
Drug authored 1
OtherEntity authored 1
Reaction authored +
CellDevelopmentStep authored +
ReactionlikeEvent authored +
EntitySet authored 1
Complex authored 1
PhysicalEntity authored 1
Cell authored 1
Depolymerisation authored +
BlackBoxEvent authored +
DefinedSet authored 1
CellLineagePath authored +
GenomeEncodedEntity authored 1
RNADrug authored 1
SimpleEntity authored 1
Event authored +
ChemicalDrug authored 1
CandidateSet authored 1
Pathway authored +
InteractionEvent authored +
Pathway revised +
InteractionEvent revised +
Event revised +
ChemicalDrug revised +
CandidateSet revised +
SimpleEntity revised +
RNADrug revised +
CellLineagePath revised +
DefinedSet revised +
GenomeEncodedEntity revised +
Cell revised +
Depolymerisation revised +
BlackBoxEvent revised +
CellDevelopmentStep revised +
Reaction revised +
EntitySet revised +
ReactionlikeEvent revised +
PhysicalEntity revised +
Complex revised +
ProteinDrug revised +
OtherEntity revised +
Drug revised +
Polymer revised +
Polymerisation revised +
EntityWithAccessionedSequence revised +
FailedReaction revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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