Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
Pathway modified +
ReferenceRNASequence modified +
ProteinDrug modified +
Taxon modified +
CandidateSet modified +
Compartment modified +
Polymerisation modified +
ExternalOntology modified +
FailedReaction modified +
DeletedControlledVocabulary modified +
SimpleEntity modified +
ReferenceTherapeutic modified +
DatabaseObject modified +
Book modified +
ReferenceGeneProduct modified +
ReactionType modified +
NegativeRegulation modified +
Depolymerisation modified +
Reaction modified +
Requirement modified +
OtherEntity modified +
EntityFunctionalStatus modified +
_Deleted modified +
GeneticallyModifiedResidue modified +
ReactionlikeEvent modified +
ReferenceDatabase modified +
NonsenseMutation modified +
InstanceEdit modified +
DefinedSet modified +
PsiMod modified +
PositiveGeneExpressionRegulation modified +
ModifiedNucleotide modified +
URL modified +
InterChainCrosslinkedResidue modified +
RetractionStatus modified +
ControlReference modified +
CatalystActivityReference modified +
GO_CellularComponent modified +
TranslationalModification modified +
PhysicalEntity modified +
Regulation modified +
SequenceOntology modified +
NegativePrecedingEvent modified +
ReferenceSequence modified +
MarkerReference modified +
GroupModifiedResidue modified +
BlackBoxEvent modified +
ControlledVocabulary modified +
PathwayDiagram modified +
CellLineagePath modified +
CatalystActivity modified +
ReferenceEntity modified +
ReferenceIsoform modified +
ReferenceMolecule modified +
NegativePrecedingEventReason modified +
Figure modified +
_DeletedInstance modified +
LiteratureReference modified +
InteractionEvent modified +
FragmentReplacedModification modified +
StableIdentifierHistory modified +
FragmentDeletionModification modified +
_UpdateTracker modified +
Anatomy modified +
EntitySet modified +
ReplacedResidue modified +
CellDevelopmentStep modified +
Complex modified +
GO_BiologicalProcess modified +
CrosslinkedResidue modified +
Event modified +
GO_MolecularFunction modified +
StableIdentifier modified +
ReviewStatus modified +
NegativeGeneExpressionRegulation modified +
Cell modified +
IntraChainCrosslinkedResidue modified +
StableIdentifierReleaseStatus modified +
FrontPage modified +
PositiveRegulation modified +
DatabaseIdentifier modified +
Species modified +
DrugActionType modified +
AbstractModifiedResidue modified +
TranscriptionalModification modified +
ReferenceGroup modified +
FunctionalStatusType modified +
EvidenceType modified +
GenomeEncodedEntity modified +
Polymer modified +
PhysicalEntityCellType modified +
EntityWithAccessionedSequence modified +
Publication modified +
Drug modified +
ChemicalDrug modified +
ReferenceDNASequence modified +
_Release modified +
ModifiedResidue modified +
Affiliation modified +
Person modified +
RNADrug modified +
FragmentInsertionModification modified +
Disease modified +
Summation modified +
RegulationReference modified +
FunctionalStatus modified +
CellType modified +
FragmentModification modified +
Depolymerisation structureModified +
Reaction structureModified +
Pathway structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Event structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
ReactionlikeEvent edited +
RNADrug edited +
Depolymerisation edited +
Reaction edited +
OtherEntity edited +
InteractionEvent edited +
GenomeEncodedEntity edited +
DefinedSet edited +
Polymer edited +
EntitySet edited +
EntityWithAccessionedSequence edited +
PhysicalEntity edited +
Pathway edited +
CandidateSet edited +
ProteinDrug edited +
Polymerisation edited +
CellLineagePath edited +
Cell edited +
Drug edited +
FailedReaction edited +
CellDevelopmentStep edited +
Complex edited +
ChemicalDrug edited +
SimpleEntity edited +
Event edited +
BlackBoxEvent edited +
CandidateSet authored 1
ProteinDrug authored 1
Polymerisation authored +
Pathway authored +
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
EntitySet authored 1
BlackBoxEvent authored +
Event authored +
Drug authored 1
FailedReaction authored +
CellDevelopmentStep authored +
SimpleEntity authored 1
Complex authored 1
ChemicalDrug authored 1
Cell authored 1
CellLineagePath authored +
OtherEntity authored 1
RNADrug authored 1
Reaction authored +
Depolymerisation authored +
ReactionlikeEvent authored +
InteractionEvent authored +
GenomeEncodedEntity authored 1
DefinedSet authored 1
Polymer authored 1
RNADrug created 1
Person created 1
FragmentInsertionModification created 1
Summation created 1
Disease created 1
RegulationReference created 1
CellType created 1
FunctionalStatus created 1
FragmentModification created 1
PhysicalEntityCellType created 1
Publication created 1
EntityWithAccessionedSequence created 1
ChemicalDrug created 1
Drug created 1
ReferenceDNASequence created 1
_Release created 1
ModifiedResidue created 1
Affiliation created 1
IntraChainCrosslinkedResidue created 1
StableIdentifierReleaseStatus created 1
PositiveRegulation created 1
FrontPage created 1
DatabaseIdentifier created 1
AbstractModifiedResidue created 1
Species created 1
DrugActionType created 1
EvidenceType created 1
FunctionalStatusType created 1
TranscriptionalModification created 1
ReferenceGroup created 1
Polymer created 1
GenomeEncodedEntity created 1
Anatomy created 1
_UpdateTracker created 1
EntitySet created 1
ReplacedResidue created 1
Complex created 1
CellDevelopmentStep created 1
CrosslinkedResidue created 1
GO_BiologicalProcess created 1
Event created 1
GO_MolecularFunction created 1
StableIdentifier created 1
ReviewStatus created 1
Cell created 1
NegativeGeneExpressionRegulation created 1
ReferenceEntity created 1
ReferenceMolecule created 1
ReferenceIsoform created 1
Figure created 1
NegativePrecedingEventReason created 1
_DeletedInstance created 1
LiteratureReference created 1
FragmentDeletionModification created 1
StableIdentifierHistory created 1
InteractionEvent created 1
FragmentReplacedModification created 1
ModifiedNucleotide created 1
PositiveGeneExpressionRegulation created 1
ControlReference created 1
InterChainCrosslinkedResidue created 1
URL created 1
RetractionStatus created 1
TranslationalModification created 1
CatalystActivityReference created 1
GO_CellularComponent created 1
Regulation created 1
PhysicalEntity created 1
ReferenceSequence created 1
MarkerReference created 1
GroupModifiedResidue created 1
SequenceOntology created 1
NegativePrecedingEvent created 1
PathwayDiagram created 1
ControlledVocabulary created 1
BlackBoxEvent created 1
CellLineagePath created 1
CatalystActivity created 1
Requirement created 1
Reaction created 1
Depolymerisation created 1
EntityFunctionalStatus created 1
OtherEntity created 1
ReactionlikeEvent created 1
ReferenceDatabase created 1
_Deleted created 1
GeneticallyModifiedResidue created 1
NonsenseMutation created 1
DefinedSet created 1
PsiMod created 1
InstanceEdit created 1
Pathway created 1
ReferenceRNASequence created 1
Compartment created 1
Polymerisation created 1
ProteinDrug created 1
CandidateSet created 1
Taxon created 1
ExternalOntology created 1
ReferenceTherapeutic created 1
SimpleEntity created 1
DeletedControlledVocabulary created 1
FailedReaction created 1
DatabaseObject created 1
ReactionType created 1
ReferenceGeneProduct created 1
Book created 1
NegativeRegulation created 1
DefinedSet reviewed +
Polymer reviewed +
InteractionEvent reviewed +
GenomeEncodedEntity reviewed +
OtherEntity reviewed +
Depolymerisation reviewed +
RNADrug reviewed +
Reaction reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
SimpleEntity reviewed +
Complex reviewed +
ChemicalDrug reviewed +
Drug reviewed +
FailedReaction reviewed +
Cell reviewed +
CellLineagePath reviewed +
Polymerisation reviewed +
ProteinDrug reviewed +
CandidateSet reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
EntitySet reviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Cell revised +
CellLineagePath revised +
Event revised +
BlackBoxEvent revised +
FailedReaction revised +
Drug revised +
ChemicalDrug revised +
CellDevelopmentStep revised +
Complex revised +
SimpleEntity revised +
EntityWithAccessionedSequence revised +
PhysicalEntity revised +
EntitySet revised +
ProteinDrug revised +
CandidateSet revised +
Polymerisation revised +
Pathway revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
DefinedSet revised +
Polymer revised +
ReactionlikeEvent revised +
OtherEntity revised +
RNADrug revised +
Reaction revised +
Depolymerisation revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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