Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
CellLineagePath structureModified +
Polymerisation structureModified +
Event structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
InteractionEvent authored +
Complex authored 1
Cell authored 1
PhysicalEntity authored 1
Pathway authored +
Reaction authored +
CandidateSet authored 1
EntitySet authored 1
EntityWithAccessionedSequence authored 1
Depolymerisation authored +
Drug authored 1
FailedReaction authored +
OtherEntity authored 1
ChemicalDrug authored 1
DefinedSet authored 1
BlackBoxEvent authored +
CellDevelopmentStep authored +
SimpleEntity authored 1
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
ProteinDrug authored 1
CellLineagePath authored +
Polymerisation authored +
Event authored +
Polymer authored 1
RNADrug authored 1
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
Complex edited +
InteractionEvent edited +
Cell edited +
PhysicalEntity edited +
Pathway edited +
Reaction edited +
CandidateSet edited +
EntitySet edited +
EntityWithAccessionedSequence edited +
Depolymerisation edited +
Drug edited +
FailedReaction edited +
ChemicalDrug edited +
OtherEntity edited +
DefinedSet edited +
BlackBoxEvent edited +
CellDevelopmentStep edited +
SimpleEntity edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
ProteinDrug edited +
Polymerisation edited +
CellLineagePath edited +
Event edited +
Polymer edited +
RNADrug edited +
Depolymerisation revised +
Drug revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
CandidateSet revised +
Reaction revised +
Pathway revised +
PhysicalEntity revised +
Cell revised +
Complex revised +
InteractionEvent revised +
RNADrug revised +
Polymer revised +
Event revised +
Polymerisation revised +
CellLineagePath revised +
ProteinDrug revised +
ReactionlikeEvent revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
CellDevelopmentStep revised +
DefinedSet revised +
BlackBoxEvent revised +
OtherEntity revised +
ChemicalDrug revised +
FailedReaction revised +
CrosslinkedResidue modified +
Regulation modified +
ReferenceGroup modified +
Polymer modified +
RNADrug modified +
NegativePrecedingEvent modified +
_Deleted modified +
EntityFunctionalStatus modified +
BlackBoxEvent modified +
OtherEntity modified +
StableIdentifierHistory modified +
GeneticallyModifiedResidue modified +
_DeletedInstance modified +
_Release modified +
EntityWithAccessionedSequence modified +
Cell modified +
Complex modified +
Reaction modified +
FunctionalStatusType modified +
ReactionlikeEvent modified +
Compartment modified +
PhysicalEntityCellType modified +
SequenceOntology modified +
ReferenceDNASequence modified +
GroupModifiedResidue modified +
Figure modified +
NegativeRegulation modified +
ChemicalDrug modified +
Disease modified +
Requirement modified +
SimpleEntity modified +
Taxon modified +
CellDevelopmentStep modified +
ReactionType modified +
NegativeGeneExpressionRegulation modified +
CatalystActivity modified +
Species modified +
RegulationReference modified +
FunctionalStatus modified +
Anatomy modified +
GO_CellularComponent modified +
Drug modified +
Affiliation modified +
DrugActionType modified +
FragmentReplacedModification modified +
FragmentDeletionModification modified +
TranscriptionalModification modified +
TranslationalModification modified +
ReferenceDatabase modified +
ControlledVocabulary modified +
Polymerisation modified +
InstanceEdit modified +
ModifiedNucleotide modified +
Event modified +
PathwayDiagram modified +
Publication modified +
GO_MolecularFunction modified +
DefinedSet modified +
DeletedControlledVocabulary modified +
GO_BiologicalProcess modified +
NonsenseMutation modified +
ExternalOntology modified +
StableIdentifier modified +
PsiMod modified +
ReplacedResidue modified +
EvidenceType modified +
FragmentModification modified +
Depolymerisation modified +
Person modified +
LiteratureReference modified +
NegativePrecedingEventReason modified +
URL modified +
_UpdateTracker modified +
StableIdentifierReleaseStatus modified +
FragmentInsertionModification modified +
DatabaseObject modified +
PhysicalEntity modified +
IntraChainCrosslinkedResidue modified +
ControlReference modified +
ReviewStatus modified +
PositiveRegulation modified +
ReferenceIsoform modified +
ReferenceSequence modified +
GenomeEncodedEntity modified +
ProteinDrug modified +
MarkerReference modified +
Summation modified +
ReferenceTherapeutic modified +
CellLineagePath modified +
FrontPage modified +
ReferenceEntity modified +
FailedReaction modified +
DatabaseIdentifier modified +
CellType modified +
ModifiedResidue modified +
ReferenceMolecule modified +
PositiveGeneExpressionRegulation modified +
CandidateSet modified +
Book modified +
CatalystActivityReference modified +
AbstractModifiedResidue modified +
ReferenceRNASequence modified +
EntitySet modified +
ReferenceGeneProduct modified +
RetractionStatus modified +
InteractionEvent modified +
Pathway modified +
InterChainCrosslinkedResidue modified +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
Polymerisation reviewed +
Event reviewed +
RNADrug reviewed +
Polymer reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
OtherEntity reviewed +
DefinedSet reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
SimpleEntity reviewed +
CandidateSet reviewed +
EntitySet reviewed +
EntityWithAccessionedSequence reviewed +
Depolymerisation reviewed +
Drug reviewed +
Complex reviewed +
InteractionEvent reviewed +
Cell reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
Reaction reviewed +
RNADrug created 1
Regulation created 1
ReferenceGroup created 1
Polymer created 1
NegativePrecedingEvent created 1
CrosslinkedResidue created 1
_DeletedInstance created 1
GeneticallyModifiedResidue created 1
StableIdentifierHistory created 1
BlackBoxEvent created 1
EntityFunctionalStatus created 1
OtherEntity created 1
_Deleted created 1
EntityWithAccessionedSequence created 1
_Release created 1
Reaction created 1
Cell created 1
Complex created 1
ReferenceDNASequence created 1
GroupModifiedResidue created 1
PhysicalEntityCellType created 1
SequenceOntology created 1
ReactionlikeEvent created 1
FunctionalStatusType created 1
Compartment created 1
Taxon created 1
SimpleEntity created 1
CellDevelopmentStep created 1
Disease created 1
Requirement created 1
ChemicalDrug created 1
NegativeRegulation created 1
Figure created 1
Drug created 1
RegulationReference created 1
Species created 1
Anatomy created 1
GO_CellularComponent created 1
FunctionalStatus created 1
CatalystActivity created 1
NegativeGeneExpressionRegulation created 1
ReactionType created 1
FragmentReplacedModification created 1
DrugActionType created 1
Affiliation created 1
ModifiedNucleotide created 1
Event created 1
ReferenceDatabase created 1
Polymerisation created 1
ControlledVocabulary created 1
InstanceEdit created 1
TranslationalModification created 1
FragmentDeletionModification created 1
TranscriptionalModification created 1
ExternalOntology created 1
NonsenseMutation created 1
GO_MolecularFunction created 1
DefinedSet created 1
GO_BiologicalProcess created 1
DeletedControlledVocabulary created 1
PathwayDiagram created 1
Publication created 1
Person created 1
Depolymerisation created 1
LiteratureReference created 1
NegativePrecedingEventReason created 1
EvidenceType created 1
PsiMod created 1
ReplacedResidue created 1
FragmentModification created 1
StableIdentifier created 1
PositiveRegulation created 1
ReviewStatus created 1
ControlReference created 1
StableIdentifierReleaseStatus created 1
PhysicalEntity created 1
DatabaseObject created 1
IntraChainCrosslinkedResidue created 1
FragmentInsertionModification created 1
URL created 1
_UpdateTracker created 1
CellLineagePath created 1
ProteinDrug created 1
MarkerReference created 1
Summation created 1
ReferenceTherapeutic created 1
ReferenceIsoform created 1
ReferenceSequence created 1
GenomeEncodedEntity created 1
ModifiedResidue created 1
ReferenceMolecule created 1
CellType created 1
DatabaseIdentifier created 1
FrontPage created 1
ReferenceEntity created 1
FailedReaction created 1
ReferenceGeneProduct created 1
ReferenceRNASequence created 1
EntitySet created 1
CatalystActivityReference created 1
Book created 1
AbstractModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
CandidateSet created 1
Pathway created 1
InterChainCrosslinkedResidue created 1
RetractionStatus created 1
InteractionEvent created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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