Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Complex revised +
Depolymerisation revised +
CandidateSet revised +
Drug revised +
RNADrug revised +
Polymer revised +
CellLineagePath revised +
ProteinDrug revised +
SimpleEntity revised +
InteractionEvent revised +
Polymerisation revised +
DefinedSet revised +
PhysicalEntity revised +
ReactionlikeEvent revised +
EntitySet revised +
OtherEntity revised +
CellDevelopmentStep revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
Reaction revised +
Pathway revised +
GenomeEncodedEntity revised +
Cell revised +
ChemicalDrug revised +
Event revised +
FailedReaction revised +
_Deleted replacementInstances +
PhysicalEntityCellType created 1
FragmentDeletionModification created 1
Taxon created 1
PsiMod created 1
Disease created 1
FunctionalStatusType created 1
Cell created 1
Anatomy created 1
ReferenceTherapeutic created 1
Affiliation created 1
NegativePrecedingEventReason created 1
GroupModifiedResidue created 1
Event created 1
Depolymerisation created 1
CandidateSet created 1
NegativePrecedingEvent created 1
FunctionalStatus created 1
ReferenceDatabase created 1
SequenceOntology created 1
Publication created 1
FragmentReplacedModification created 1
_Deleted created 1
_Release created 1
_UpdateTracker created 1
DatabaseIdentifier created 1
ControlledVocabulary created 1
OtherEntity created 1
DeletedControlledVocabulary created 1
NegativeGeneExpressionRegulation created 1
FragmentModification created 1
TranslationalModification created 1
ReactionType created 1
CellDevelopmentStep created 1
Reaction created 1
Figure created 1
RegulationReference created 1
ReferenceEntity created 1
ChemicalDrug created 1
FailedReaction created 1
RetractionStatus created 1
Complex created 1
StableIdentifier created 1
Polymer created 1
Requirement created 1
CellLineagePath created 1
Summation created 1
EntityFunctionalStatus created 1
NonsenseMutation created 1
DefinedSet created 1
URL created 1
TranscriptionalModification created 1
ReferenceSequence created 1
FrontPage created 1
ReferenceGroup created 1
GO_MolecularFunction created 1
CatalystActivityReference created 1
EntityWithAccessionedSequence created 1
LiteratureReference created 1
ModifiedNucleotide created 1
InterChainCrosslinkedResidue created 1
BlackBoxEvent created 1
Pathway created 1
CatalystActivity created 1
PositiveRegulation created 1
PositiveGeneExpressionRegulation created 1
CellType created 1
ReferenceMolecule created 1
DrugActionType created 1
StableIdentifierReleaseStatus created 1
ReferenceGeneProduct created 1
RNADrug created 1
PathwayDiagram created 1
InteractionEvent created 1
Species created 1
StableIdentifierHistory created 1
SimpleEntity created 1
ModifiedResidue created 1
GO_CellularComponent created 1
ReplacedResidue created 1
ReferenceDNASequence created 1
GO_BiologicalProcess created 1
InstanceEdit created 1
NegativeRegulation created 1
ReferenceRNASequence created 1
ReactionlikeEvent created 1
EntitySet created 1
PhysicalEntity created 1
MarkerReference created 1
ReferenceIsoform created 1
FragmentInsertionModification created 1
DatabaseObject created 1
GenomeEncodedEntity created 1
IntraChainCrosslinkedResidue created 1
GeneticallyModifiedResidue created 1
AbstractModifiedResidue created 1
Book created 1
_DeletedInstance created 1
CrosslinkedResidue created 1
ExternalOntology created 1
Drug created 1
Regulation created 1
Person created 1
ProteinDrug created 1
Polymerisation created 1
EvidenceType created 1
Compartment created 1
ReviewStatus created 1
ControlReference created 1
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent edited +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
Cell edited +
Pathway edited +
Reaction edited +
GenomeEncodedEntity edited +
FailedReaction edited +
Event edited +
ChemicalDrug edited +
Polymer edited +
CandidateSet edited +
Depolymerisation edited +
Complex edited +
Drug edited +
RNADrug edited +
Polymerisation edited +
ProteinDrug edited +
SimpleEntity edited +
CellLineagePath edited +
InteractionEvent edited +
DefinedSet edited +
PhysicalEntity edited +
OtherEntity edited +
ReactionlikeEvent edited +
EntitySet edited +
PhysicalEntity authored 1
OtherEntity authored 1
ReactionlikeEvent authored +
EntitySet authored 1
DefinedSet authored 1
ProteinDrug authored 1
SimpleEntity authored 1
CellLineagePath authored +
InteractionEvent authored +
Polymerisation authored +
CandidateSet authored 1
Complex authored 1
Depolymerisation authored +
Drug authored 1
RNADrug authored 1
Polymer authored 1
ChemicalDrug authored 1
Event authored +
FailedReaction authored +
Pathway authored +
Reaction authored +
GenomeEncodedEntity authored 1
Cell authored 1
CellDevelopmentStep authored +
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
Cell reviewed +
GenomeEncodedEntity reviewed +
Reaction reviewed +
Pathway reviewed +
BlackBoxEvent reviewed +
EntityWithAccessionedSequence reviewed +
CellDevelopmentStep reviewed +
FailedReaction reviewed +
Event reviewed +
ChemicalDrug reviewed +
Polymerisation reviewed +
InteractionEvent reviewed +
ProteinDrug reviewed +
SimpleEntity reviewed +
CellLineagePath reviewed +
Polymer reviewed +
RNADrug reviewed +
Drug reviewed +
CandidateSet reviewed +
Complex reviewed +
Depolymerisation reviewed +
OtherEntity reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
PhysicalEntity reviewed +
DefinedSet reviewed +
FailedReaction modified +
ChemicalDrug modified +
ReferenceEntity modified +
Figure modified +
RegulationReference modified +
Reaction modified +
TranslationalModification modified +
CellDevelopmentStep modified +
ReactionType modified +
GO_MolecularFunction modified +
CatalystActivityReference modified +
ReferenceGroup modified +
URL modified +
TranscriptionalModification modified +
DefinedSet modified +
ReferenceSequence modified +
FrontPage modified +
NonsenseMutation modified +
Summation modified +
EntityFunctionalStatus modified +
Requirement modified +
CellLineagePath modified +
StableIdentifier modified +
Polymer modified +
RetractionStatus modified +
Complex modified +
GroupModifiedResidue modified +
Event modified +
ReferenceTherapeutic modified +
Affiliation modified +
NegativePrecedingEventReason modified +
Anatomy modified +
FunctionalStatusType modified +
Disease modified +
Cell modified +
Taxon modified +
FragmentDeletionModification modified +
PsiMod modified +
PhysicalEntityCellType modified +
FragmentModification modified +
ControlledVocabulary modified +
OtherEntity modified +
NegativeGeneExpressionRegulation modified +
DeletedControlledVocabulary modified +
_UpdateTracker modified +
DatabaseIdentifier modified +
FragmentReplacedModification modified +
_Deleted modified +
_Release modified +
Publication modified +
NegativePrecedingEvent modified +
ReferenceDatabase modified +
SequenceOntology modified +
FunctionalStatus modified +
Depolymerisation modified +
CandidateSet modified +
CrosslinkedResidue modified +
ExternalOntology modified +
_DeletedInstance modified +
Book modified +
GenomeEncodedEntity modified +
AbstractModifiedResidue modified +
IntraChainCrosslinkedResidue modified +
GeneticallyModifiedResidue modified +
DatabaseObject modified +
ReferenceIsoform modified +
FragmentInsertionModification modified +
ControlReference modified +
ReviewStatus modified +
Polymerisation modified +
Compartment modified +
EvidenceType modified +
ProteinDrug modified +
Person modified +
Drug modified +
Regulation modified +
DrugActionType modified +
StableIdentifierReleaseStatus modified +
ReferenceMolecule modified +
CellType modified +
PositiveRegulation modified +
CatalystActivity modified +
PositiveGeneExpressionRegulation modified +
Pathway modified +
BlackBoxEvent modified +
EntityWithAccessionedSequence modified +
LiteratureReference modified +
ModifiedNucleotide modified +
InterChainCrosslinkedResidue modified +
MarkerReference modified +
ReactionlikeEvent modified +
EntitySet modified +
PhysicalEntity modified +
ReferenceRNASequence modified +
NegativeRegulation modified +
GO_BiologicalProcess modified +
ReferenceDNASequence modified +
InstanceEdit modified +
ModifiedResidue modified +
GO_CellularComponent modified +
ReplacedResidue modified +
InteractionEvent modified +
Species modified +
SimpleEntity modified +
StableIdentifierHistory modified +
RNADrug modified +
ReferenceGeneProduct modified +
PathwayDiagram modified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
Pathway structureModified +
CellLineagePath structureModified +
Reaction structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
Event structureModified +
ReactionlikeEvent structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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