Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
Pathway reviewed +
EntitySet reviewed +
FailedReaction reviewed +
RNADrug reviewed +
CellLineagePath reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
Polymerisation reviewed +
Cell reviewed +
CandidateSet reviewed +
Polymer reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
Event reviewed +
ChemicalDrug reviewed +
Complex reviewed +
Reaction reviewed +
Drug reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
DefinedSet reviewed +
PhysicalEntity reviewed +
Drug authored 1
Reaction authored +
DefinedSet authored 1
PhysicalEntity authored 1
Depolymerisation authored +
BlackBoxEvent authored +
SimpleEntity authored 1
Polymer authored 1
CandidateSet authored 1
Polymerisation authored +
Cell authored 1
ChemicalDrug authored 1
Complex authored 1
Event authored +
EntityWithAccessionedSequence authored 1
OtherEntity authored 1
ProteinDrug authored 1
GenomeEncodedEntity authored 1
CellLineagePath authored +
RNADrug authored 1
CellDevelopmentStep authored +
ReactionlikeEvent authored +
InteractionEvent authored +
EntitySet authored 1
Pathway authored +
FailedReaction authored +
IntraChainCrosslinkedResidue created 1
ReactionlikeEvent created 1
TranscriptionalModification created 1
DrugActionType created 1
ProteinDrug created 1
CatalystActivity created 1
MarkerReference created 1
FunctionalStatus created 1
Disease created 1
Pathway created 1
DatabaseIdentifier created 1
DefinedSet created 1
DatabaseObject created 1
ReferenceIsoform created 1
EntityFunctionalStatus created 1
GroupModifiedResidue created 1
ReactionType created 1
CellType created 1
Event created 1
RegulationReference created 1
ReferenceRNASequence created 1
FragmentInsertionModification created 1
Figure created 1
FragmentReplacedModification created 1
Polymerisation created 1
SequenceOntology created 1
FunctionalStatusType created 1
OtherEntity created 1
NegativeRegulation created 1
_Release created 1
InstanceEdit created 1
RNADrug created 1
ModifiedResidue created 1
StableIdentifierReleaseStatus created 1
FailedReaction created 1
ReferenceEntity created 1
StableIdentifier created 1
FragmentModification created 1
GO_MolecularFunction created 1
FragmentDeletionModification created 1
Depolymerisation created 1
_DeletedInstance created 1
ReferenceSequence created 1
ReferenceDatabase created 1
Reaction created 1
ReferenceGeneProduct created 1
EvidenceType created 1
Taxon created 1
Person created 1
TranslationalModification created 1
StableIdentifierHistory created 1
EntityWithAccessionedSequence created 1
URL created 1
PsiMod created 1
GeneticallyModifiedResidue created 1
ReferenceMolecule created 1
Cell created 1
CellDevelopmentStep created 1
Summation created 1
ReferenceGroup created 1
ReplacedResidue created 1
GenomeEncodedEntity created 1
GO_CellularComponent created 1
Book created 1
Affiliation created 1
Species created 1
NegativePrecedingEvent created 1
EntitySet created 1
DeletedControlledVocabulary created 1
PhysicalEntityCellType created 1
Anatomy created 1
NonsenseMutation created 1
ReviewStatus created 1
ReferenceDNASequence created 1
_UpdateTracker created 1
AbstractModifiedResidue created 1
Regulation created 1
ControlledVocabulary created 1
Drug created 1
Compartment created 1
ExternalOntology created 1
_Deleted created 1
Publication created 1
Polymer created 1
CandidateSet created 1
InterChainCrosslinkedResidue created 1
InteractionEvent created 1
ModifiedNucleotide created 1
PathwayDiagram created 1
LiteratureReference created 1
CellLineagePath created 1
ReferenceTherapeutic created 1
NegativePrecedingEventReason created 1
Requirement created 1
PositiveGeneExpressionRegulation created 1
FrontPage created 1
GO_BiologicalProcess created 1
ControlReference created 1
PhysicalEntity created 1
BlackBoxEvent created 1
NegativeGeneExpressionRegulation created 1
CrosslinkedResidue created 1
PositiveRegulation created 1
Complex created 1
ChemicalDrug created 1
RetractionStatus created 1
SimpleEntity created 1
CatalystActivityReference created 1
DrugActionType modified +
ProteinDrug modified +
CatalystActivity modified +
ReactionlikeEvent modified +
IntraChainCrosslinkedResidue modified +
TranscriptionalModification modified +
Disease modified +
MarkerReference modified +
FunctionalStatus modified +
DatabaseIdentifier modified +
Pathway modified +
EntityFunctionalStatus modified +
DefinedSet modified +
DatabaseObject modified +
ReferenceIsoform modified +
ReferenceRNASequence modified +
FragmentInsertionModification modified +
Figure modified +
FragmentReplacedModification modified +
Polymerisation modified +
SequenceOntology modified +
GroupModifiedResidue modified +
ReactionType modified +
Event modified +
CellType modified +
RegulationReference modified +
FunctionalStatusType modified +
OtherEntity modified +
InstanceEdit modified +
NegativeRegulation modified +
_Release modified +
RNADrug modified +
FragmentModification modified +
StableIdentifier modified +
ModifiedResidue modified +
ReferenceEntity modified +
StableIdentifierReleaseStatus modified +
FailedReaction modified +
_DeletedInstance modified +
ReferenceSequence modified +
ReferenceGeneProduct modified +
Reaction modified +
ReferenceDatabase modified +
GO_MolecularFunction modified +
Depolymerisation modified +
FragmentDeletionModification modified +
PsiMod modified +
GeneticallyModifiedResidue modified +
ReferenceMolecule modified +
Cell modified +
Taxon modified +
EvidenceType modified +
Person modified +
TranslationalModification modified +
URL modified +
EntityWithAccessionedSequence modified +
StableIdentifierHistory modified +
GenomeEncodedEntity modified +
Book modified +
GO_CellularComponent modified +
CellDevelopmentStep modified +
Summation modified +
ReferenceGroup modified +
ReplacedResidue modified +
EntitySet modified +
DeletedControlledVocabulary modified +
PhysicalEntityCellType modified +
Anatomy modified +
Affiliation modified +
Species modified +
NegativePrecedingEvent modified +
AbstractModifiedResidue modified +
ControlledVocabulary modified +
Regulation modified +
Drug modified +
Compartment modified +
ReviewStatus modified +
NonsenseMutation modified +
ReferenceDNASequence modified +
_UpdateTracker modified +
_Deleted modified +
Polymer modified +
Publication modified +
CandidateSet modified +
ExternalOntology modified +
LiteratureReference modified +
CellLineagePath modified +
InterChainCrosslinkedResidue modified +
InteractionEvent modified +
PathwayDiagram modified +
ModifiedNucleotide modified +
GO_BiologicalProcess modified +
ControlReference modified +
NegativePrecedingEventReason modified +
ReferenceTherapeutic modified +
PositiveGeneExpressionRegulation modified +
Requirement modified +
FrontPage modified +
CrosslinkedResidue modified +
PositiveRegulation modified +
PhysicalEntity modified +
NegativeGeneExpressionRegulation modified +
BlackBoxEvent modified +
RetractionStatus modified +
SimpleEntity modified +
CatalystActivityReference modified +
Complex modified +
ChemicalDrug modified +
Event internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
GenomeEncodedEntity revised +
OtherEntity revised +
ProteinDrug revised +
CellLineagePath revised +
RNADrug revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
InteractionEvent revised +
EntitySet revised +
Pathway revised +
FailedReaction revised +
Reaction revised +
Drug revised +
DefinedSet revised +
PhysicalEntity revised +
BlackBoxEvent revised +
Depolymerisation revised +
Polymer revised +
SimpleEntity revised +
Polymerisation revised +
Cell revised +
CandidateSet revised +
Complex revised +
ChemicalDrug revised +
EntityWithAccessionedSequence revised +
Event revised +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
CellLineagePath structureModified +
Event structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
Pathway structureModified +
FailedReaction edited +
EntitySet edited +
Pathway edited +
ReactionlikeEvent edited +
CellDevelopmentStep edited +
InteractionEvent edited +
ProteinDrug edited +
OtherEntity edited +
GenomeEncodedEntity edited +
RNADrug edited +
CellLineagePath edited +
Complex edited +
ChemicalDrug edited +
EntityWithAccessionedSequence edited +
Event edited +
Polymer edited +
SimpleEntity edited +
Polymerisation edited +
Cell edited +
CandidateSet edited +
DefinedSet edited +
PhysicalEntity edited +
BlackBoxEvent edited +
Depolymerisation edited +
Reaction edited +
Drug edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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