Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Complex edited +
RNADrug edited +
CellDevelopmentStep edited +
Cell edited +
BlackBoxEvent edited +
CellLineagePath edited +
EntityWithAccessionedSequence edited +
PhysicalEntity edited +
CandidateSet edited +
Drug edited +
GenomeEncodedEntity edited +
ChemicalDrug edited +
FailedReaction edited +
Event edited +
DefinedSet edited +
Reaction edited +
Pathway edited +
OtherEntity edited +
Polymer edited +
SimpleEntity edited +
EntitySet edited +
Depolymerisation edited +
Polymerisation edited +
InteractionEvent edited +
ProteinDrug edited +
ReactionlikeEvent edited +
_Deleted replacementInstances +
GeneticallyModifiedResidue created 1
Person created 1
GO_MolecularFunction created 1
Drug created 1
GroupModifiedResidue created 1
ReferenceEntity created 1
NonsenseMutation created 1
CatalystActivity created 1
TranscriptionalModification created 1
FunctionalStatusType created 1
RNADrug created 1
NegativePrecedingEvent created 1
LiteratureReference created 1
PhysicalEntityCellType created 1
RetractionStatus created 1
ReactionlikeEvent created 1
MarkerReference created 1
Publication created 1
Depolymerisation created 1
NegativeRegulation created 1
SimpleEntity created 1
CatalystActivityReference created 1
SequenceOntology created 1
OtherEntity created 1
NegativePrecedingEventReason created 1
_UpdateTracker created 1
ReviewStatus created 1
GenomeEncodedEntity created 1
ControlledVocabulary created 1
DeletedControlledVocabulary created 1
GO_CellularComponent created 1
Anatomy created 1
TranslationalModification created 1
ModifiedNucleotide created 1
EvidenceType created 1
CellDevelopmentStep created 1
FragmentDeletionModification created 1
PositiveGeneExpressionRegulation created 1
FragmentReplacedModification created 1
Taxon created 1
Complex created 1
PositiveRegulation created 1
ReferenceGeneProduct created 1
InteractionEvent created 1
Polymerisation created 1
Disease created 1
Summation created 1
NegativeGeneExpressionRegulation created 1
DatabaseIdentifier created 1
DrugActionType created 1
_DeletedInstance created 1
FragmentInsertionModification created 1
Event created 1
EntityFunctionalStatus created 1
PsiMod created 1
ModifiedResidue created 1
ChemicalDrug created 1
Compartment created 1
Species created 1
DatabaseObject created 1
FragmentModification created 1
PhysicalEntity created 1
ReferenceMolecule created 1
ReferenceGroup created 1
Regulation created 1
BlackBoxEvent created 1
Cell created 1
StableIdentifier created 1
InterChainCrosslinkedResidue created 1
Figure created 1
ReferenceDNASequence created 1
ExternalOntology created 1
FunctionalStatus created 1
URL created 1
ProteinDrug created 1
Book created 1
Polymer created 1
EntitySet created 1
FrontPage created 1
Affiliation created 1
IntraChainCrosslinkedResidue created 1
FailedReaction created 1
PathwayDiagram created 1
StableIdentifierReleaseStatus created 1
ReferenceIsoform created 1
CandidateSet created 1
_Release created 1
CellLineagePath created 1
EntityWithAccessionedSequence created 1
ReferenceRNASequence created 1
Requirement created 1
CrosslinkedResidue created 1
ReplacedResidue created 1
ReferenceDatabase created 1
RegulationReference created 1
ReferenceTherapeutic created 1
GO_BiologicalProcess created 1
ReferenceSequence created 1
StableIdentifierHistory created 1
ControlReference created 1
CellType created 1
Pathway created 1
_Deleted created 1
Reaction created 1
AbstractModifiedResidue created 1
DefinedSet created 1
ReactionType created 1
InstanceEdit created 1
ProteinDrug reviewed +
Polymerisation reviewed +
InteractionEvent reviewed +
ReactionlikeEvent reviewed +
SimpleEntity reviewed +
EntitySet reviewed +
Polymer reviewed +
Depolymerisation reviewed +
Event reviewed +
DefinedSet reviewed +
Reaction reviewed +
OtherEntity reviewed +
Pathway reviewed +
ChemicalDrug reviewed +
FailedReaction reviewed +
CandidateSet reviewed +
Drug reviewed +
GenomeEncodedEntity reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
CellLineagePath reviewed +
RNADrug reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
Cell reviewed +
Complex reviewed +
Drug revised +
CandidateSet revised +
GenomeEncodedEntity revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
PhysicalEntity revised +
RNADrug revised +
CellDevelopmentStep revised +
BlackBoxEvent revised +
Cell revised +
Complex revised +
Polymerisation revised +
InteractionEvent revised +
ProteinDrug revised +
ReactionlikeEvent revised +
Polymer revised +
SimpleEntity revised +
EntitySet revised +
Depolymerisation revised +
DefinedSet revised +
Event revised +
Reaction revised +
Pathway revised +
OtherEntity revised +
ChemicalDrug revised +
FailedReaction revised +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
Event structureModified +
Reaction structureModified +
FailedReaction structureModified +
FailedReaction internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CandidateSet authored 1
Drug authored 1
GenomeEncodedEntity authored 1
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
CellLineagePath authored +
RNADrug authored 1
CellDevelopmentStep authored +
BlackBoxEvent authored +
Cell authored 1
Complex authored 1
ProteinDrug authored 1
InteractionEvent authored +
Polymerisation authored +
ReactionlikeEvent authored +
SimpleEntity authored 1
EntitySet authored 1
Polymer authored 1
Depolymerisation authored +
Reaction authored +
Event authored +
DefinedSet authored 1
OtherEntity authored 1
Pathway authored +
ChemicalDrug authored 1
FailedReaction authored +
Regulation modified +
PhysicalEntity modified +
ReferenceGroup modified +
ReferenceMolecule modified +
FragmentModification modified +
DatabaseObject modified +
Figure modified +
ReferenceDNASequence modified +
ExternalOntology modified +
StableIdentifier modified +
InterChainCrosslinkedResidue modified +
BlackBoxEvent modified +
Cell modified +
Book modified +
EntitySet modified +
Polymer modified +
FunctionalStatus modified +
ProteinDrug modified +
URL modified +
IntraChainCrosslinkedResidue modified +
FailedReaction modified +
StableIdentifierReleaseStatus modified +
PathwayDiagram modified +
FrontPage modified +
Affiliation modified +
Requirement modified +
ReferenceRNASequence modified +
EntityWithAccessionedSequence modified +
CellLineagePath modified +
CandidateSet modified +
_Release modified +
ReferenceIsoform modified +
ReferenceTherapeutic modified +
RegulationReference modified +
GO_BiologicalProcess modified +
CrosslinkedResidue modified +
ReferenceDatabase modified +
ReplacedResidue modified +
ControlReference modified +
StableIdentifierHistory modified +
CellType modified +
ReferenceSequence modified +
ReactionType modified +
InstanceEdit modified +
_Deleted modified +
Pathway modified +
AbstractModifiedResidue modified +
DefinedSet modified +
Reaction modified +
GroupModifiedResidue modified +
ReferenceEntity modified +
GeneticallyModifiedResidue modified +
Drug modified +
Person modified +
GO_MolecularFunction modified +
LiteratureReference modified +
PhysicalEntityCellType modified +
NonsenseMutation modified +
FunctionalStatusType modified +
RNADrug modified +
NegativePrecedingEvent modified +
TranscriptionalModification modified +
CatalystActivity modified +
Depolymerisation modified +
NegativeRegulation modified +
Publication modified +
CatalystActivityReference modified +
SimpleEntity modified +
MarkerReference modified +
ReactionlikeEvent modified +
RetractionStatus modified +
ReviewStatus modified +
_UpdateTracker modified +
NegativePrecedingEventReason modified +
OtherEntity modified +
SequenceOntology modified +
Anatomy modified +
TranslationalModification modified +
EvidenceType modified +
ModifiedNucleotide modified +
ControlledVocabulary modified +
GenomeEncodedEntity modified +
GO_CellularComponent modified +
DeletedControlledVocabulary modified +
Complex modified +
FragmentReplacedModification modified +
Taxon modified +
PositiveRegulation modified +
CellDevelopmentStep modified +
PositiveGeneExpressionRegulation modified +
FragmentDeletionModification modified +
Summation modified +
ReferenceGeneProduct modified +
Disease modified +
InteractionEvent modified +
Polymerisation modified +
Species modified +
ChemicalDrug modified +
ModifiedResidue modified +
Compartment modified +
DatabaseIdentifier modified +
NegativeGeneExpressionRegulation modified +
DrugActionType modified +
EntityFunctionalStatus modified +
Event modified +
PsiMod modified +
FragmentInsertionModification modified +
_DeletedInstance modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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