Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Cell reviewed +
Polymerisation reviewed +
CandidateSet reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
EntitySet reviewed +
Depolymerisation reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
Complex reviewed +
DefinedSet reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
Drug reviewed +
EntityWithAccessionedSequence reviewed +
FailedReaction reviewed +
RNADrug reviewed +
SimpleEntity reviewed +
InteractionEvent reviewed +
Reaction reviewed +
CellDevelopmentStep reviewed +
ReactionlikeEvent reviewed +
CellLineagePath reviewed +
_Deleted replacementInstances +
Event structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
Pathway structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
Reaction authored +
CellDevelopmentStep authored +
CellLineagePath authored +
ReactionlikeEvent authored +
RNADrug authored 1
InteractionEvent authored +
SimpleEntity authored 1
Drug authored 1
EntityWithAccessionedSequence authored 1
GenomeEncodedEntity authored 1
FailedReaction authored +
ChemicalDrug authored 1
Polymer authored 1
Event authored +
Complex authored 1
BlackBoxEvent authored +
DefinedSet authored 1
EntitySet authored 1
Depolymerisation authored +
Pathway authored +
ProteinDrug authored 1
PhysicalEntity authored 1
OtherEntity authored 1
Cell authored 1
Polymerisation authored +
CandidateSet authored 1
ReferenceMolecule modified +
URL modified +
_DeletedInstance modified +
EntityFunctionalStatus modified +
PhysicalEntity modified +
StableIdentifierReleaseStatus modified +
AbstractModifiedResidue modified +
StableIdentifierHistory modified +
ReactionType modified +
Taxon modified +
Polymerisation modified +
Person modified +
Disease modified +
TranscriptionalModification modified +
TranslationalModification modified +
InstanceEdit modified +
Reaction modified +
CatalystActivityReference modified +
FunctionalStatusType modified +
NonsenseMutation modified +
FrontPage modified +
FailedReaction modified +
Drug modified +
PositiveRegulation modified +
EntityWithAccessionedSequence modified +
GenomeEncodedEntity modified +
GO_BiologicalProcess modified +
Event modified +
NegativeGeneExpressionRegulation modified +
Compartment modified +
ReferenceTherapeutic modified +
ReferenceGroup modified +
Pathway modified +
SequenceOntology modified +
ReferenceSequence modified +
GeneticallyModifiedResidue modified +
MarkerReference modified +
Cell modified +
ReferenceDatabase modified +
DrugActionType modified +
CellDevelopmentStep modified +
InteractionEvent modified +
ControlReference modified +
RetractionStatus modified +
FunctionalStatus modified +
ReviewStatus modified +
ChemicalDrug modified +
Summation modified +
Polymer modified +
NegativeRegulation modified +
GroupModifiedResidue modified +
ReferenceDNASequence modified +
Regulation modified +
ModifiedResidue modified +
EntitySet modified +
CrosslinkedResidue modified +
ExternalOntology modified +
PathwayDiagram modified +
ReferenceGeneProduct modified +
RegulationReference modified +
_Deleted modified +
ReplacedResidue modified +
ProteinDrug modified +
GO_MolecularFunction modified +
CandidateSet modified +
Affiliation modified +
CellType modified +
PositiveGeneExpressionRegulation modified +
FragmentInsertionModification modified +
PhysicalEntityCellType modified +
NegativePrecedingEvent modified +
Publication modified +
SimpleEntity modified +
GO_CellularComponent modified +
DeletedControlledVocabulary modified +
RNADrug modified +
_Release modified +
NegativePrecedingEventReason modified +
ReferenceEntity modified +
ReferenceRNASequence modified +
Complex modified +
Book modified +
BlackBoxEvent modified +
Depolymerisation modified +
PsiMod modified +
DatabaseObject modified +
StableIdentifier modified +
CatalystActivity modified +
EvidenceType modified +
OtherEntity modified +
FragmentModification modified +
InterChainCrosslinkedResidue modified +
ModifiedNucleotide modified +
Figure modified +
IntraChainCrosslinkedResidue modified +
CellLineagePath modified +
Anatomy modified +
ReactionlikeEvent modified +
DatabaseIdentifier modified +
LiteratureReference modified +
FragmentReplacedModification modified +
Species modified +
_UpdateTracker modified +
ControlledVocabulary modified +
Requirement modified +
DefinedSet modified +
FragmentDeletionModification modified +
ReferenceIsoform modified +
Polymerisation revised +
CandidateSet revised +
Cell revised +
OtherEntity revised +
PhysicalEntity revised +
ProteinDrug revised +
Pathway revised +
Depolymerisation revised +
EntitySet revised +
DefinedSet revised +
Complex revised +
BlackBoxEvent revised +
Event revised +
Polymer revised +
ChemicalDrug revised +
FailedReaction revised +
GenomeEncodedEntity revised +
EntityWithAccessionedSequence revised +
Drug revised +
SimpleEntity revised +
InteractionEvent revised +
RNADrug revised +
ReactionlikeEvent revised +
CellLineagePath revised +
CellDevelopmentStep revised +
Reaction revised +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation edited +
EntitySet edited +
Pathway edited +
OtherEntity edited +
PhysicalEntity edited +
ProteinDrug edited +
Polymerisation edited +
CandidateSet edited +
Cell edited +
ReactionlikeEvent edited +
CellLineagePath edited +
CellDevelopmentStep edited +
Reaction edited +
SimpleEntity edited +
InteractionEvent edited +
RNADrug edited +
FailedReaction edited +
GenomeEncodedEntity edited +
EntityWithAccessionedSequence edited +
Drug edited +
DefinedSet edited +
Complex edited +
BlackBoxEvent edited +
Event edited +
Polymer edited +
ChemicalDrug edited +
CellType created 1
Affiliation created 1
GO_MolecularFunction created 1
CandidateSet created 1
ReplacedResidue created 1
ProteinDrug created 1
_Deleted created 1
RegulationReference created 1
ReferenceGeneProduct created 1
EntitySet created 1
ModifiedResidue created 1
PathwayDiagram created 1
CrosslinkedResidue created 1
ExternalOntology created 1
Regulation created 1
ReferenceDNASequence created 1
BlackBoxEvent created 1
Complex created 1
Book created 1
ReferenceRNASequence created 1
_Release created 1
NegativePrecedingEventReason created 1
ReferenceEntity created 1
DeletedControlledVocabulary created 1
GO_CellularComponent created 1
RNADrug created 1
NegativePrecedingEvent created 1
Publication created 1
SimpleEntity created 1
PhysicalEntityCellType created 1
PositiveGeneExpressionRegulation created 1
FragmentInsertionModification created 1
Figure created 1
ModifiedNucleotide created 1
InterChainCrosslinkedResidue created 1
EvidenceType created 1
FragmentModification created 1
OtherEntity created 1
CatalystActivity created 1
StableIdentifier created 1
Depolymerisation created 1
DatabaseObject created 1
PsiMod created 1
FragmentDeletionModification created 1
ReferenceIsoform created 1
DefinedSet created 1
Requirement created 1
_UpdateTracker created 1
ControlledVocabulary created 1
FragmentReplacedModification created 1
Species created 1
DatabaseIdentifier created 1
LiteratureReference created 1
CellLineagePath created 1
IntraChainCrosslinkedResidue created 1
ReactionlikeEvent created 1
Anatomy created 1
Disease created 1
TranscriptionalModification created 1
StableIdentifierHistory created 1
ReactionType created 1
Person created 1
Polymerisation created 1
Taxon created 1
StableIdentifierReleaseStatus created 1
AbstractModifiedResidue created 1
PhysicalEntity created 1
EntityFunctionalStatus created 1
_DeletedInstance created 1
URL created 1
ReferenceMolecule created 1
NegativeGeneExpressionRegulation created 1
GO_BiologicalProcess created 1
Event created 1
PositiveRegulation created 1
EntityWithAccessionedSequence created 1
Drug created 1
GenomeEncodedEntity created 1
FailedReaction created 1
FunctionalStatusType created 1
NonsenseMutation created 1
FrontPage created 1
CatalystActivityReference created 1
Reaction created 1
InstanceEdit created 1
TranslationalModification created 1
Cell created 1
ReferenceDatabase created 1
MarkerReference created 1
GeneticallyModifiedResidue created 1
SequenceOntology created 1
ReferenceSequence created 1
ReferenceGroup created 1
Pathway created 1
ReferenceTherapeutic created 1
Compartment created 1
ChemicalDrug created 1
Summation created 1
GroupModifiedResidue created 1
Polymer created 1
NegativeRegulation created 1
ReviewStatus created 1
RetractionStatus created 1
FunctionalStatus created 1
ControlReference created 1
InteractionEvent created 1
CellDevelopmentStep created 1
DrugActionType created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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