Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent edited +
GenomeEncodedEntity edited +
Drug edited +
Polymerisation edited +
Polymer edited +
ChemicalDrug edited +
SimpleEntity edited +
DefinedSet edited +
EntityWithAccessionedSequence edited +
Cell edited +
InteractionEvent edited +
Depolymerisation edited +
Reaction edited +
CandidateSet edited +
EntitySet edited +
FailedReaction edited +
RNADrug edited +
CellDevelopmentStep edited +
Complex edited +
ProteinDrug edited +
PhysicalEntity edited +
OtherEntity edited +
Pathway edited +
CellLineagePath edited +
BlackBoxEvent edited +
Event edited +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
Pathway structureModified +
Reaction structureModified +
InteractionEvent structureModified +
Event structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
SimpleEntity authored 1
ChemicalDrug authored 1
DefinedSet authored 1
EntityWithAccessionedSequence authored 1
Cell authored 1
CandidateSet authored 1
EntitySet authored 1
InteractionEvent authored +
Reaction authored +
Depolymerisation authored +
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
Polymerisation authored +
Drug authored 1
Polymer authored 1
OtherEntity authored 1
PhysicalEntity authored 1
Pathway authored +
BlackBoxEvent authored +
CellLineagePath authored +
Event authored +
CellDevelopmentStep authored +
RNADrug authored 1
FailedReaction authored +
Complex authored 1
ProteinDrug authored 1
ControlledVocabulary modified +
DeletedControlledVocabulary modified +
Polymerisation modified +
Polymer modified +
StableIdentifierReleaseStatus modified +
ReplacedResidue modified +
IntraChainCrosslinkedResidue modified +
ReviewStatus modified +
GroupModifiedResidue modified +
PositiveRegulation modified +
ProteinDrug modified +
NegativePrecedingEventReason modified +
Anatomy modified +
CellLineagePath modified +
PositiveGeneExpressionRegulation modified +
GO_BiologicalProcess modified +
FragmentInsertionModification modified +
ReferenceDatabase modified +
AbstractModifiedResidue modified +
Affiliation modified +
_UpdateTracker modified +
ReferenceGeneProduct modified +
ModifiedResidue modified +
ReactionlikeEvent modified +
Person modified +
PsiMod modified +
Publication modified +
RegulationReference modified +
_Release modified +
ExternalOntology modified +
EntityWithAccessionedSequence modified +
SimpleEntity modified +
FragmentDeletionModification modified +
ChemicalDrug modified +
TranslationalModification modified +
DatabaseIdentifier modified +
CandidateSet modified +
GO_MolecularFunction modified +
CatalystActivity modified +
URL modified +
Cell modified +
ModifiedNucleotide modified +
FailedReaction modified +
CellDevelopmentStep modified +
FunctionalStatus modified +
ReferenceTherapeutic modified +
DrugActionType modified +
Species modified +
EvidenceType modified +
Event modified +
BlackBoxEvent modified +
ReferenceGroup modified +
InstanceEdit modified +
InterChainCrosslinkedResidue modified +
PathwayDiagram modified +
GenomeEncodedEntity modified +
NonsenseMutation modified +
Drug modified +
Book modified +
ControlReference modified +
Figure modified +
GO_CellularComponent modified +
Requirement modified +
DefinedSet modified +
CellType modified +
FragmentReplacedModification modified +
NegativeGeneExpressionRegulation modified +
EntitySet modified +
Reaction modified +
InteractionEvent modified +
TranscriptionalModification modified +
PhysicalEntityCellType modified +
Depolymerisation modified +
CatalystActivityReference modified +
MarkerReference modified +
ReferenceSequence modified +
GeneticallyModifiedResidue modified +
ReactionType modified +
Pathway modified +
EntityFunctionalStatus modified +
Taxon modified +
OtherEntity modified +
FrontPage modified +
ReferenceRNASequence modified +
PhysicalEntity modified +
LiteratureReference modified +
ReferenceMolecule modified +
FragmentModification modified +
ReferenceDNASequence modified +
CrosslinkedResidue modified +
ReferenceIsoform modified +
_DeletedInstance modified +
ReferenceEntity modified +
Disease modified +
Summation modified +
StableIdentifierHistory modified +
NegativePrecedingEvent modified +
Compartment modified +
FunctionalStatusType modified +
NegativeRegulation modified +
RNADrug modified +
DatabaseObject modified +
Complex modified +
RetractionStatus modified +
_Deleted modified +
Regulation modified +
SequenceOntology modified +
StableIdentifier modified +
_Deleted replacementInstances +
SequenceOntology created 1
Regulation created 1
StableIdentifier created 1
RNADrug created 1
FunctionalStatusType created 1
NegativeRegulation created 1
RetractionStatus created 1
_Deleted created 1
Complex created 1
DatabaseObject created 1
Summation created 1
ReferenceEntity created 1
Disease created 1
Compartment created 1
NegativePrecedingEvent created 1
StableIdentifierHistory created 1
CrosslinkedResidue created 1
FragmentModification created 1
ReferenceDNASequence created 1
ReferenceIsoform created 1
_DeletedInstance created 1
OtherEntity created 1
FrontPage created 1
ReferenceRNASequence created 1
PhysicalEntity created 1
Pathway created 1
EntityFunctionalStatus created 1
Taxon created 1
LiteratureReference created 1
ReferenceMolecule created 1
MarkerReference created 1
ReferenceSequence created 1
ReactionType created 1
GeneticallyModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
CellType created 1
Requirement created 1
FragmentReplacedModification created 1
DefinedSet created 1
CatalystActivityReference created 1
EntitySet created 1
TranscriptionalModification created 1
InteractionEvent created 1
Depolymerisation created 1
Reaction created 1
PhysicalEntityCellType created 1
GenomeEncodedEntity created 1
PathwayDiagram created 1
ControlReference created 1
Book created 1
Figure created 1
GO_CellularComponent created 1
NonsenseMutation created 1
Drug created 1
DrugActionType created 1
ReferenceGroup created 1
BlackBoxEvent created 1
InstanceEdit created 1
InterChainCrosslinkedResidue created 1
Species created 1
Event created 1
EvidenceType created 1
CellDevelopmentStep created 1
FunctionalStatus created 1
FailedReaction created 1
ReferenceTherapeutic created 1
SimpleEntity created 1
FragmentDeletionModification created 1
ChemicalDrug created 1
ExternalOntology created 1
EntityWithAccessionedSequence created 1
CatalystActivity created 1
ModifiedNucleotide created 1
Cell created 1
URL created 1
DatabaseIdentifier created 1
TranslationalModification created 1
CandidateSet created 1
GO_MolecularFunction created 1
ReferenceGeneProduct created 1
ModifiedResidue created 1
ReactionlikeEvent created 1
ReferenceDatabase created 1
Affiliation created 1
AbstractModifiedResidue created 1
_UpdateTracker created 1
RegulationReference created 1
_Release created 1
Publication created 1
PsiMod created 1
Person created 1
NegativePrecedingEventReason created 1
Anatomy created 1
CellLineagePath created 1
PositiveGeneExpressionRegulation created 1
FragmentInsertionModification created 1
GO_BiologicalProcess created 1
GroupModifiedResidue created 1
PositiveRegulation created 1
ProteinDrug created 1
ReplacedResidue created 1
StableIdentifierReleaseStatus created 1
IntraChainCrosslinkedResidue created 1
ReviewStatus created 1
ControlledVocabulary created 1
DeletedControlledVocabulary created 1
Polymerisation created 1
Polymer created 1
CellDevelopmentStep revised +
RNADrug revised +
FailedReaction revised +
ProteinDrug revised +
Complex revised +
Pathway revised +
PhysicalEntity revised +
OtherEntity revised +
Event revised +
CellLineagePath revised +
BlackBoxEvent revised +
ReactionlikeEvent revised +
GenomeEncodedEntity revised +
Polymerisation revised +
Drug revised +
Polymer revised +
DefinedSet revised +
EntityWithAccessionedSequence revised +
ChemicalDrug revised +
SimpleEntity revised +
InteractionEvent revised +
Reaction revised +
Depolymerisation revised +
CandidateSet revised +
EntitySet revised +
Cell revised +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Polymerisation reviewed +
Drug reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
EntitySet reviewed +
InteractionEvent reviewed +
Depolymerisation reviewed +
Reaction reviewed +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
DefinedSet reviewed +
SimpleEntity reviewed +
ChemicalDrug reviewed +
ProteinDrug reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
RNADrug reviewed +
FailedReaction reviewed +
Event reviewed +
BlackBoxEvent reviewed +
CellLineagePath reviewed +
Pathway reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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