Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
Pathway structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Reaction structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
CandidateSet revised +
InteractionEvent revised +
FailedReaction revised +
Cell revised +
ChemicalDrug revised +
OtherEntity revised +
Drug revised +
Polymerisation revised +
Reaction revised +
DefinedSet revised +
Complex revised +
CellDevelopmentStep revised +
Depolymerisation revised +
GenomeEncodedEntity revised +
RNADrug revised +
PhysicalEntity revised +
Pathway revised +
ReactionlikeEvent revised +
CellLineagePath revised +
SimpleEntity revised +
BlackBoxEvent revised +
Polymer revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
ProteinDrug revised +
Event revised +
NegativePrecedingEventReason modified +
NegativePrecedingEvent modified +
_UpdateTracker modified +
Summation modified +
_Release modified +
ControlReference modified +
PositiveGeneExpressionRegulation modified +
DrugActionType modified +
FragmentModification modified +
DatabaseIdentifier modified +
CrosslinkedResidue modified +
InstanceEdit modified +
Affiliation modified +
ExternalOntology modified +
ReferenceSequence modified +
Requirement modified +
ReferenceGeneProduct modified +
GenomeEncodedEntity modified +
Depolymerisation modified +
PhysicalEntityCellType modified +
InteractionEvent modified +
Species modified +
LiteratureReference modified +
Reaction modified +
FunctionalStatusType modified +
Polymerisation modified +
DefinedSet modified +
PathwayDiagram modified +
ModifiedNucleotide modified +
GeneticallyModifiedResidue modified +
StableIdentifier modified +
TranscriptionalModification modified +
PsiMod modified +
ReferenceGroup modified +
Event modified +
ProteinDrug modified +
DeletedControlledVocabulary modified +
SimpleEntity modified +
CellLineagePath modified +
FragmentDeletionModification modified +
FragmentReplacedModification modified +
EvidenceType modified +
BlackBoxEvent modified +
Regulation modified +
ControlledVocabulary modified +
ReferenceIsoform modified +
Complex modified +
Disease modified +
ReferenceRNASequence modified +
_Deleted modified +
PositiveRegulation modified +
ReactionType modified +
ReferenceDNASequence modified +
ReferenceMolecule modified +
CellType modified +
Book modified +
GO_BiologicalProcess modified +
GroupModifiedResidue modified +
ReferenceTherapeutic modified +
Taxon modified +
AbstractModifiedResidue modified +
Figure modified +
Polymer modified +
Compartment modified +
ReferenceDatabase modified +
CellDevelopmentStep modified +
NonsenseMutation modified +
NegativeRegulation modified +
SequenceOntology modified +
FrontPage modified +
Pathway modified +
Person modified +
ReactionlikeEvent modified +
ReviewStatus modified +
FailedReaction modified +
InterChainCrosslinkedResidue modified +
CatalystActivityReference modified +
EntityFunctionalStatus modified +
ChemicalDrug modified +
OtherEntity modified +
Drug modified +
RetractionStatus modified +
GO_CellularComponent modified +
GO_MolecularFunction modified +
EntityWithAccessionedSequence modified +
IntraChainCrosslinkedResidue modified +
EntitySet modified +
ReferenceEntity modified +
CatalystActivity modified +
TranslationalModification modified +
StableIdentifierHistory modified +
MarkerReference modified +
NegativeGeneExpressionRegulation modified +
StableIdentifierReleaseStatus modified +
ReplacedResidue modified +
FragmentInsertionModification modified +
URL modified +
PhysicalEntity modified +
RNADrug modified +
DatabaseObject modified +
ModifiedResidue modified +
CandidateSet modified +
Cell modified +
_DeletedInstance modified +
Anatomy modified +
FunctionalStatus modified +
Publication modified +
RegulationReference modified +
CellLineagePath reviewed +
SimpleEntity reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
Event reviewed +
ProteinDrug reviewed +
EntityWithAccessionedSequence reviewed +
EntitySet reviewed +
ChemicalDrug reviewed +
Cell reviewed +
CandidateSet reviewed +
InteractionEvent reviewed +
FailedReaction reviewed +
DefinedSet reviewed +
OtherEntity reviewed +
Drug reviewed +
Polymerisation reviewed +
Reaction reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
ReactionlikeEvent reviewed +
GenomeEncodedEntity reviewed +
Depolymerisation reviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Complex edited +
CellDevelopmentStep edited +
GenomeEncodedEntity edited +
Depolymerisation edited +
RNADrug edited +
Pathway edited +
PhysicalEntity edited +
ReactionlikeEvent edited +
InteractionEvent edited +
CandidateSet edited +
FailedReaction edited +
ChemicalDrug edited +
Cell edited +
Drug edited +
OtherEntity edited +
Polymerisation edited +
Reaction edited +
DefinedSet edited +
EntitySet edited +
EntityWithAccessionedSequence edited +
ProteinDrug edited +
Event edited +
SimpleEntity edited +
CellLineagePath edited +
BlackBoxEvent edited +
Polymer edited +
Drug authored 1
OtherEntity authored 1
Polymerisation authored +
Reaction authored +
DefinedSet authored 1
InteractionEvent authored +
CandidateSet authored 1
FailedReaction authored +
ChemicalDrug authored 1
Cell authored 1
GenomeEncodedEntity authored 1
Depolymerisation authored +
RNADrug authored 1
PhysicalEntity authored 1
Pathway authored +
ReactionlikeEvent authored +
Complex authored 1
CellDevelopmentStep authored +
BlackBoxEvent authored +
Polymer authored 1
CellLineagePath authored +
SimpleEntity authored 1
EntityWithAccessionedSequence authored 1
EntitySet authored 1
ProteinDrug authored 1
Event authored +
_Deleted replacementInstances +
Polymerisation created 1
Reaction created 1
LiteratureReference created 1
FunctionalStatusType created 1
DefinedSet created 1
PathwayDiagram created 1
InteractionEvent created 1
PhysicalEntityCellType created 1
Species created 1
GenomeEncodedEntity created 1
Depolymerisation created 1
ReferenceGeneProduct created 1
ReferenceSequence created 1
Requirement created 1
ExternalOntology created 1
Affiliation created 1
InstanceEdit created 1
CrosslinkedResidue created 1
DatabaseIdentifier created 1
_Release created 1
ControlReference created 1
FragmentModification created 1
DrugActionType created 1
PositiveGeneExpressionRegulation created 1
NegativePrecedingEvent created 1
NegativePrecedingEventReason created 1
Summation created 1
_UpdateTracker created 1
_Deleted created 1
PositiveRegulation created 1
ReferenceRNASequence created 1
Disease created 1
Complex created 1
ReferenceIsoform created 1
ControlledVocabulary created 1
Regulation created 1
FragmentReplacedModification created 1
BlackBoxEvent created 1
EvidenceType created 1
DeletedControlledVocabulary created 1
FragmentDeletionModification created 1
CellLineagePath created 1
SimpleEntity created 1
PsiMod created 1
TranscriptionalModification created 1
Event created 1
ReferenceGroup created 1
ProteinDrug created 1
ModifiedNucleotide created 1
StableIdentifier created 1
GeneticallyModifiedResidue created 1
Drug created 1
OtherEntity created 1
InterChainCrosslinkedResidue created 1
ReviewStatus created 1
FailedReaction created 1
ChemicalDrug created 1
EntityFunctionalStatus created 1
CatalystActivityReference created 1
SequenceOntology created 1
NegativeRegulation created 1
FrontPage created 1
Person created 1
ReactionlikeEvent created 1
Pathway created 1
ReferenceDatabase created 1
NonsenseMutation created 1
CellDevelopmentStep created 1
AbstractModifiedResidue created 1
Taxon created 1
Figure created 1
ReferenceTherapeutic created 1
Compartment created 1
Polymer created 1
GroupModifiedResidue created 1
GO_BiologicalProcess created 1
CellType created 1
Book created 1
ReferenceMolecule created 1
ReactionType created 1
ReferenceDNASequence created 1
RegulationReference created 1
FunctionalStatus created 1
Publication created 1
Anatomy created 1
CandidateSet created 1
ModifiedResidue created 1
_DeletedInstance created 1
Cell created 1
URL created 1
RNADrug created 1
DatabaseObject created 1
PhysicalEntity created 1
ReplacedResidue created 1
StableIdentifierReleaseStatus created 1
FragmentInsertionModification created 1
NegativeGeneExpressionRegulation created 1
MarkerReference created 1
StableIdentifierHistory created 1
TranslationalModification created 1
IntraChainCrosslinkedResidue created 1
EntitySet created 1
EntityWithAccessionedSequence created 1
CatalystActivity created 1
ReferenceEntity created 1
RetractionStatus created 1
GO_MolecularFunction created 1
GO_CellularComponent created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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