Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Figure created 1
NegativeRegulation created 1
PositiveGeneExpressionRegulation created 1
CellLineagePath created 1
_Deleted created 1
Taxon created 1
ExternalOntology created 1
StableIdentifierHistory created 1
ProteinDrug created 1
IntraChainCrosslinkedResidue created 1
DatabaseIdentifier created 1
Person created 1
SimpleEntity created 1
RNADrug created 1
StableIdentifier created 1
BlackBoxEvent created 1
NegativeGeneExpressionRegulation created 1
FragmentModification created 1
PsiMod created 1
PhysicalEntity created 1
RetractionStatus created 1
_UpdateTracker created 1
ControlledVocabulary created 1
Drug created 1
GO_CellularComponent created 1
Species created 1
TranslationalModification created 1
FailedReaction created 1
EntityWithAccessionedSequence created 1
PositiveRegulation created 1
ReferenceDNASequence created 1
FrontPage created 1
URL created 1
FragmentDeletionModification created 1
Cell created 1
Complex created 1
ControlReference created 1
Requirement created 1
MarkerReference created 1
DrugActionType created 1
ChemicalDrug created 1
GeneticallyModifiedResidue created 1
ModifiedResidue created 1
PhysicalEntityCellType created 1
Anatomy created 1
ReferenceGeneProduct created 1
OtherEntity created 1
Event created 1
Polymerisation created 1
CandidateSet created 1
InteractionEvent created 1
ReferenceIsoform created 1
Disease created 1
Regulation created 1
Book created 1
GenomeEncodedEntity created 1
ReferenceTherapeutic created 1
Depolymerisation created 1
StableIdentifierReleaseStatus created 1
GO_BiologicalProcess created 1
CrosslinkedResidue created 1
NonsenseMutation created 1
FragmentInsertionModification created 1
Publication created 1
PathwayDiagram created 1
FragmentReplacedModification created 1
ReferenceMolecule created 1
LiteratureReference created 1
Polymer created 1
Compartment created 1
SequenceOntology created 1
ReactionType created 1
ReferenceDatabase created 1
GO_MolecularFunction created 1
DeletedControlledVocabulary created 1
InterChainCrosslinkedResidue created 1
GroupModifiedResidue created 1
EntityFunctionalStatus created 1
ReferenceGroup created 1
ModifiedNucleotide created 1
Pathway created 1
NegativePrecedingEventReason created 1
_DeletedInstance created 1
TranscriptionalModification created 1
CellType created 1
ReferenceSequence created 1
CatalystActivityReference created 1
ReferenceRNASequence created 1
EvidenceType created 1
NegativePrecedingEvent created 1
AbstractModifiedResidue created 1
CellDevelopmentStep created 1
FunctionalStatusType created 1
ReferenceEntity created 1
_Release created 1
Summation created 1
DatabaseObject created 1
InstanceEdit created 1
CatalystActivity created 1
ReactionlikeEvent created 1
FunctionalStatus created 1
ReviewStatus created 1
EntitySet created 1
Reaction created 1
DefinedSet created 1
RegulationReference created 1
ReplacedResidue created 1
Affiliation created 1
InteractionEvent structureModified +
Pathway structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Event structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
ReactionType modified +
SequenceOntology modified +
Compartment modified +
Polymer modified +
LiteratureReference modified +
ReferenceMolecule modified +
FragmentReplacedModification modified +
PathwayDiagram modified +
Publication modified +
FragmentInsertionModification modified +
NonsenseMutation modified +
CrosslinkedResidue modified +
GO_BiologicalProcess modified +
StableIdentifierReleaseStatus modified +
Book modified +
GenomeEncodedEntity modified +
Depolymerisation modified +
ReferenceTherapeutic modified +
Affiliation modified +
ReplacedResidue modified +
RegulationReference modified +
DefinedSet modified +
Reaction modified +
EntitySet modified +
ReviewStatus modified +
FunctionalStatus modified +
ReactionlikeEvent modified +
CatalystActivity modified +
DatabaseObject modified +
InstanceEdit modified +
Summation modified +
FunctionalStatusType modified +
ReferenceEntity modified +
_Release modified +
AbstractModifiedResidue modified +
CellDevelopmentStep modified +
NegativePrecedingEvent modified +
EvidenceType modified +
ReferenceRNASequence modified +
CatalystActivityReference modified +
ReferenceSequence modified +
CellType modified +
TranscriptionalModification modified +
_DeletedInstance modified +
NegativePrecedingEventReason modified +
Pathway modified +
ModifiedNucleotide modified +
GroupModifiedResidue modified +
EntityFunctionalStatus modified +
ReferenceGroup modified +
InterChainCrosslinkedResidue modified +
DeletedControlledVocabulary modified +
GO_MolecularFunction modified +
ReferenceDatabase modified +
ControlledVocabulary modified +
_UpdateTracker modified +
PhysicalEntity modified +
RetractionStatus modified +
PsiMod modified +
FragmentModification modified +
NegativeGeneExpressionRegulation modified +
BlackBoxEvent modified +
StableIdentifier modified +
RNADrug modified +
SimpleEntity modified +
Person modified +
DatabaseIdentifier modified +
IntraChainCrosslinkedResidue modified +
ProteinDrug modified +
StableIdentifierHistory modified +
ExternalOntology modified +
Taxon modified +
_Deleted modified +
CellLineagePath modified +
PositiveGeneExpressionRegulation modified +
NegativeRegulation modified +
Figure modified +
Regulation modified +
Disease modified +
ReferenceIsoform modified +
InteractionEvent modified +
CandidateSet modified +
Polymerisation modified +
Event modified +
OtherEntity modified +
Anatomy modified +
ReferenceGeneProduct modified +
PhysicalEntityCellType modified +
GeneticallyModifiedResidue modified +
ModifiedResidue modified +
ChemicalDrug modified +
DrugActionType modified +
MarkerReference modified +
Requirement modified +
ControlReference modified +
Complex modified +
Cell modified +
URL modified +
FragmentDeletionModification modified +
ReferenceDNASequence modified +
FrontPage modified +
EntityWithAccessionedSequence modified +
PositiveRegulation modified +
TranslationalModification modified +
FailedReaction modified +
Species modified +
Drug modified +
GO_CellularComponent modified +
Event revised +
Polymerisation revised +
CellDevelopmentStep revised +
Polymer revised +
OtherEntity revised +
BlackBoxEvent revised +
ChemicalDrug revised +
SimpleEntity revised +
RNADrug revised +
Reaction revised +
DefinedSet revised +
PhysicalEntity revised +
InteractionEvent revised +
EntitySet revised +
ReactionlikeEvent revised +
CandidateSet revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
FailedReaction revised +
GenomeEncodedEntity revised +
Depolymerisation revised +
Drug revised +
Cell revised +
Complex revised +
Pathway revised +
ProteinDrug revised +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent edited +
CandidateSet edited +
InteractionEvent edited +
EntitySet edited +
Reaction edited +
DefinedSet edited +
PhysicalEntity edited +
ChemicalDrug edited +
SimpleEntity edited +
RNADrug edited +
OtherEntity edited +
CellDevelopmentStep edited +
Polymer edited +
BlackBoxEvent edited +
Event edited +
Polymerisation edited +
Cell edited +
Pathway edited +
Complex edited +
ProteinDrug edited +
Drug edited +
GenomeEncodedEntity edited +
Depolymerisation edited +
FailedReaction edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
CandidateSet authored 1
ReactionlikeEvent authored +
EntitySet authored 1
InteractionEvent authored +
PhysicalEntity authored 1
DefinedSet authored 1
Reaction authored +
RNADrug authored 1
ChemicalDrug authored 1
SimpleEntity authored 1
BlackBoxEvent authored +
Polymer authored 1
CellDevelopmentStep authored +
OtherEntity authored 1
Polymerisation authored +
Event authored +
Complex authored 1
Pathway authored +
ProteinDrug authored 1
Cell authored 1
Drug authored 1
GenomeEncodedEntity authored 1
Depolymerisation authored +
FailedReaction authored +
EntityWithAccessionedSequence authored 1
CellLineagePath authored +
Cell reviewed +
Pathway reviewed +
Complex reviewed +
ProteinDrug reviewed +
GenomeEncodedEntity reviewed +
FailedReaction reviewed +
Depolymerisation reviewed +
Drug reviewed +
CellLineagePath reviewed +
EntityWithAccessionedSequence reviewed +
InteractionEvent reviewed +
EntitySet reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
Reaction reviewed +
PhysicalEntity reviewed +
ChemicalDrug reviewed +
SimpleEntity reviewed +
RNADrug reviewed +
Event reviewed +
Polymerisation reviewed +
CellDevelopmentStep reviewed +
OtherEntity reviewed +
Polymer reviewed +
BlackBoxEvent reviewed +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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