Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
RNADrug reviewed +
Event reviewed +
SimpleEntity reviewed +
ReactionlikeEvent reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
EntitySet reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
CellLineagePath reviewed +
Drug reviewed +
ProteinDrug reviewed +
Reaction reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
Polymerisation reviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
PhysicalEntity reviewed +
OtherEntity reviewed +
Polymer reviewed +
CellDevelopmentStep reviewed +
Cell reviewed +
_Deleted replacementInstances +
CandidateSet modified +
PhysicalEntity modified +
StableIdentifier modified +
ReferenceEntity modified +
GroupModifiedResidue modified +
CellDevelopmentStep modified +
ReferenceSequence modified +
PsiMod modified +
NegativePrecedingEventReason modified +
FragmentDeletionModification modified +
Polymerisation modified +
BlackBoxEvent modified +
CatalystActivityReference modified +
FragmentReplacedModification modified +
Publication modified +
Affiliation modified +
EntitySet modified +
RetractionStatus modified +
CatalystActivity modified +
ProteinDrug modified +
Drug modified +
Pathway modified +
GO_BiologicalProcess modified +
AbstractModifiedResidue modified +
Disease modified +
ModifiedResidue modified +
ReactionlikeEvent modified +
DefinedSet modified +
GO_MolecularFunction modified +
StableIdentifierReleaseStatus modified +
_Deleted modified +
DatabaseObject modified +
FragmentModification modified +
Anatomy modified +
Event modified +
Taxon modified +
Requirement modified +
GO_CellularComponent modified +
RegulationReference modified +
PhysicalEntityCellType modified +
FrontPage modified +
Figure modified +
PositiveRegulation modified +
ReferenceIsoform modified +
Compartment modified +
FailedReaction modified +
ControlReference modified +
ReferenceGeneProduct modified +
FunctionalStatus modified +
SimpleEntity modified +
Book modified +
URL modified +
Species modified +
ReferenceTherapeutic modified +
NegativeRegulation modified +
InstanceEdit modified +
RNADrug modified +
PathwayDiagram modified +
DatabaseIdentifier modified +
ExternalOntology modified +
EntityFunctionalStatus modified +
ReferenceRNASequence modified +
ReplacedResidue modified +
ReferenceMolecule modified +
Cell modified +
TranslationalModification modified +
Complex modified +
MarkerReference modified +
NegativeGeneExpressionRegulation modified +
Depolymerisation modified +
_DeletedInstance modified +
FragmentInsertionModification modified +
Regulation modified +
ModifiedNucleotide modified +
LiteratureReference modified +
ReferenceDNASequence modified +
_Release modified +
InterChainCrosslinkedResidue modified +
TranscriptionalModification modified +
DeletedControlledVocabulary modified +
Person modified +
OtherEntity modified +
CellType modified +
FunctionalStatusType modified +
CrosslinkedResidue modified +
Polymer modified +
ChemicalDrug modified +
ReferenceDatabase modified +
Reaction modified +
SequenceOntology modified +
CellLineagePath modified +
ControlledVocabulary modified +
EntityWithAccessionedSequence modified +
IntraChainCrosslinkedResidue modified +
ReviewStatus modified +
PositiveGeneExpressionRegulation modified +
_UpdateTracker modified +
StableIdentifierHistory modified +
Summation modified +
NonsenseMutation modified +
ReferenceGroup modified +
GeneticallyModifiedResidue modified +
DrugActionType modified +
GenomeEncodedEntity modified +
NegativePrecedingEvent modified +
EvidenceType modified +
InteractionEvent modified +
ReactionType modified +
Depolymerisation edited +
ReactionlikeEvent edited +
DefinedSet edited +
SimpleEntity edited +
Event edited +
RNADrug edited +
InteractionEvent edited +
GenomeEncodedEntity edited +
Cell edited +
CellDevelopmentStep edited +
Polymer edited +
OtherEntity edited +
CandidateSet edited +
PhysicalEntity edited +
ChemicalDrug edited +
Polymerisation edited +
BlackBoxEvent edited +
Complex edited +
Reaction edited +
Drug edited +
ProteinDrug edited +
CellLineagePath edited +
Pathway edited +
EntityWithAccessionedSequence edited +
EntitySet edited +
FailedReaction edited +
Reaction internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
EntitySet authored 1
FailedReaction authored +
Drug authored 1
ProteinDrug authored 1
Pathway authored +
EntityWithAccessionedSequence authored 1
CellLineagePath authored +
Reaction authored +
Complex authored 1
ChemicalDrug authored 1
BlackBoxEvent authored +
Polymerisation authored +
PhysicalEntity authored 1
CandidateSet authored 1
OtherEntity authored 1
Polymer authored 1
CellDevelopmentStep authored +
Cell authored 1
GenomeEncodedEntity authored 1
InteractionEvent authored +
RNADrug authored 1
Event authored +
SimpleEntity authored 1
DefinedSet authored 1
ReactionlikeEvent authored +
Depolymerisation authored +
InteractionEvent revised +
GenomeEncodedEntity revised +
RNADrug revised +
Event revised +
DefinedSet revised +
ReactionlikeEvent revised +
SimpleEntity revised +
Depolymerisation revised +
EntityWithAccessionedSequence revised +
Pathway revised +
CellLineagePath revised +
ProteinDrug revised +
Drug revised +
FailedReaction revised +
EntitySet revised +
Reaction revised +
Polymerisation revised +
BlackBoxEvent revised +
ChemicalDrug revised +
Complex revised +
Cell revised +
CellDevelopmentStep revised +
Polymer revised +
CandidateSet revised +
PhysicalEntity revised +
OtherEntity revised +
RegulationReference created 1
PhysicalEntityCellType created 1
FrontPage created 1
Figure created 1
Compartment created 1
PositiveRegulation created 1
ReferenceIsoform created 1
FailedReaction created 1
ControlReference created 1
ReferenceGeneProduct created 1
FunctionalStatus created 1
SimpleEntity created 1
Book created 1
URL created 1
Species created 1
ReferenceTherapeutic created 1
NegativeRegulation created 1
InstanceEdit created 1
PathwayDiagram created 1
DatabaseIdentifier created 1
RNADrug created 1
ExternalOntology created 1
PhysicalEntity created 1
CandidateSet created 1
ReferenceEntity created 1
GroupModifiedResidue created 1
StableIdentifier created 1
CellDevelopmentStep created 1
ReferenceSequence created 1
PsiMod created 1
NegativePrecedingEventReason created 1
FragmentDeletionModification created 1
BlackBoxEvent created 1
Polymerisation created 1
CatalystActivityReference created 1
FragmentReplacedModification created 1
Publication created 1
Affiliation created 1
RetractionStatus created 1
EntitySet created 1
CatalystActivity created 1
Drug created 1
ProteinDrug created 1
Pathway created 1
GO_BiologicalProcess created 1
AbstractModifiedResidue created 1
ModifiedResidue created 1
Disease created 1
DefinedSet created 1
ReactionlikeEvent created 1
GO_MolecularFunction created 1
StableIdentifierReleaseStatus created 1
DatabaseObject created 1
_Deleted created 1
Anatomy created 1
FragmentModification created 1
Event created 1
Taxon created 1
Requirement created 1
GO_CellularComponent created 1
OtherEntity created 1
DeletedControlledVocabulary created 1
Person created 1
CellType created 1
FunctionalStatusType created 1
CrosslinkedResidue created 1
Polymer created 1
ReferenceDatabase created 1
ChemicalDrug created 1
Reaction created 1
SequenceOntology created 1
EntityWithAccessionedSequence created 1
CellLineagePath created 1
ControlledVocabulary created 1
IntraChainCrosslinkedResidue created 1
ReviewStatus created 1
PositiveGeneExpressionRegulation created 1
_UpdateTracker created 1
StableIdentifierHistory created 1
Summation created 1
NonsenseMutation created 1
DrugActionType created 1
ReferenceGroup created 1
GeneticallyModifiedResidue created 1
GenomeEncodedEntity created 1
EvidenceType created 1
NegativePrecedingEvent created 1
InteractionEvent created 1
ReactionType created 1
EntityFunctionalStatus created 1
ReplacedResidue created 1
ReferenceRNASequence created 1
ReferenceMolecule created 1
Cell created 1
TranslationalModification created 1
Complex created 1
MarkerReference created 1
NegativeGeneExpressionRegulation created 1
Depolymerisation created 1
_DeletedInstance created 1
LiteratureReference created 1
FragmentInsertionModification created 1
Regulation created 1
ModifiedNucleotide created 1
ReferenceDNASequence created 1
_Release created 1
TranscriptionalModification created 1
InterChainCrosslinkedResidue created 1
Reaction structureModified +
Event structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Pathway structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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