Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
PositiveGeneExpressionRegulation modified +
StableIdentifierReleaseStatus modified +
DefinedSet modified +
ReferenceEntity modified +
StableIdentifierHistory modified +
FailedReaction modified +
ReferenceMolecule modified +
PhysicalEntityCellType modified +
GenomeEncodedEntity modified +
GeneticallyModifiedResidue modified +
SimpleEntity modified +
ReviewStatus modified +
Polymer modified +
InteractionEvent modified +
_Deleted modified +
FunctionalStatus modified +
BlackBoxEvent modified +
Disease modified +
Compartment modified +
ReactionType modified +
_Release modified +
MarkerReference modified +
EntityWithAccessionedSequence modified +
_DeletedInstance modified +
GO_MolecularFunction modified +
FragmentDeletionModification modified +
ReferenceIsoform modified +
CellType modified +
NegativePrecedingEvent modified +
NegativeGeneExpressionRegulation modified +
Affiliation modified +
LiteratureReference modified +
Drug modified +
_UpdateTracker modified +
Species modified +
Cell modified +
DeletedControlledVocabulary modified +
Regulation modified +
FragmentModification modified +
ReactionlikeEvent modified +
ReferenceGeneProduct modified +
CellDevelopmentStep modified +
FrontPage modified +
AbstractModifiedResidue modified +
IntraChainCrosslinkedResidue modified +
GroupModifiedResidue modified +
NonsenseMutation modified +
PositiveRegulation modified +
Book modified +
StableIdentifier modified +
PathwayDiagram modified +
ChemicalDrug modified +
ReferenceDNASequence modified +
EvidenceType modified +
CatalystActivityReference modified +
CandidateSet modified +
DrugActionType modified +
Requirement modified +
Complex modified +
Figure modified +
ReferenceDatabase modified +
InstanceEdit modified +
ControlReference modified +
URL modified +
ProteinDrug modified +
GO_BiologicalProcess modified +
CellLineagePath modified +
DatabaseObject modified +
SequenceOntology modified +
ControlledVocabulary modified +
Anatomy modified +
Event modified +
ReferenceTherapeutic modified +
TranscriptionalModification modified +
ReferenceGroup modified +
Polymerisation modified +
Person modified +
ModifiedResidue modified +
Pathway modified +
ReferenceRNASequence modified +
Publication modified +
RetractionStatus modified +
FunctionalStatusType modified +
Depolymerisation modified +
NegativeRegulation modified +
ReferenceSequence modified +
CrosslinkedResidue modified +
GO_CellularComponent modified +
EntitySet modified +
OtherEntity modified +
CatalystActivity modified +
DatabaseIdentifier modified +
RNADrug modified +
InterChainCrosslinkedResidue modified +
PsiMod modified +
ModifiedNucleotide modified +
FragmentInsertionModification modified +
NegativePrecedingEventReason modified +
Summation modified +
EntityFunctionalStatus modified +
FragmentReplacedModification modified +
Taxon modified +
ReplacedResidue modified +
Reaction modified +
TranslationalModification modified +
ExternalOntology modified +
RegulationReference modified +
PhysicalEntity modified +
ReferenceSequence created 1
CrosslinkedResidue created 1
NegativeRegulation created 1
FunctionalStatusType created 1
Depolymerisation created 1
RetractionStatus created 1
EntitySet created 1
OtherEntity created 1
GO_CellularComponent created 1
ReferenceRNASequence created 1
Publication created 1
InterChainCrosslinkedResidue created 1
RNADrug created 1
CatalystActivity created 1
DatabaseIdentifier created 1
EntityFunctionalStatus created 1
Summation created 1
Taxon created 1
ReplacedResidue created 1
FragmentReplacedModification created 1
PsiMod created 1
ModifiedNucleotide created 1
NegativePrecedingEventReason created 1
FragmentInsertionModification created 1
ExternalOntology created 1
TranslationalModification created 1
PhysicalEntity created 1
RegulationReference created 1
Reaction created 1
Requirement created 1
Figure created 1
Complex created 1
ReferenceDNASequence created 1
ChemicalDrug created 1
DrugActionType created 1
EvidenceType created 1
CandidateSet created 1
CatalystActivityReference created 1
ControlReference created 1
URL created 1
ReferenceDatabase created 1
InstanceEdit created 1
ControlledVocabulary created 1
SequenceOntology created 1
ReferenceTherapeutic created 1
Anatomy created 1
Event created 1
GO_BiologicalProcess created 1
ProteinDrug created 1
CellLineagePath created 1
DatabaseObject created 1
Person created 1
Polymerisation created 1
ModifiedResidue created 1
Pathway created 1
TranscriptionalModification created 1
ReferenceGroup created 1
_UpdateTracker created 1
Drug created 1
Species created 1
NegativeGeneExpressionRegulation created 1
NegativePrecedingEvent created 1
Affiliation created 1
LiteratureReference created 1
FragmentModification created 1
Regulation created 1
DeletedControlledVocabulary created 1
Cell created 1
CellDevelopmentStep created 1
FrontPage created 1
AbstractModifiedResidue created 1
ReactionlikeEvent created 1
ReferenceGeneProduct created 1
Book created 1
StableIdentifier created 1
PositiveRegulation created 1
PathwayDiagram created 1
GroupModifiedResidue created 1
IntraChainCrosslinkedResidue created 1
NonsenseMutation created 1
DefinedSet created 1
ReferenceEntity created 1
StableIdentifierHistory created 1
PositiveGeneExpressionRegulation created 1
StableIdentifierReleaseStatus created 1
Polymer created 1
SimpleEntity created 1
ReviewStatus created 1
InteractionEvent created 1
_Deleted created 1
PhysicalEntityCellType created 1
ReferenceMolecule created 1
FailedReaction created 1
GeneticallyModifiedResidue created 1
GenomeEncodedEntity created 1
_Release created 1
MarkerReference created 1
BlackBoxEvent created 1
FunctionalStatus created 1
Compartment created 1
ReactionType created 1
Disease created 1
CellType created 1
GO_MolecularFunction created 1
_DeletedInstance created 1
EntityWithAccessionedSequence created 1
ReferenceIsoform created 1
FragmentDeletionModification created 1
_Deleted replacementInstances +
ChemicalDrug reviewed +
CandidateSet reviewed +
Depolymerisation reviewed +
Drug reviewed +
DefinedSet reviewed +
OtherEntity reviewed +
Complex reviewed +
EntitySet reviewed +
FailedReaction reviewed +
Cell reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
Polymer reviewed +
InteractionEvent reviewed +
RNADrug reviewed +
ReactionlikeEvent reviewed +
ProteinDrug reviewed +
BlackBoxEvent reviewed +
CellLineagePath reviewed +
CellDevelopmentStep reviewed +
Event reviewed +
EntityWithAccessionedSequence reviewed +
Reaction reviewed +
Polymerisation reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
Event structureModified +
FailedReaction structureModified +
Reaction structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
Pathway structureModified +
CandidateSet edited +
ChemicalDrug edited +
OtherEntity edited +
EntitySet edited +
Complex edited +
Drug edited +
Depolymerisation edited +
DefinedSet edited +
Cell edited +
GenomeEncodedEntity edited +
FailedReaction edited +
RNADrug edited +
SimpleEntity edited +
InteractionEvent edited +
Polymer edited +
CellLineagePath edited +
ReactionlikeEvent edited +
ProteinDrug edited +
BlackBoxEvent edited +
Event edited +
CellDevelopmentStep edited +
Reaction edited +
EntityWithAccessionedSequence edited +
PhysicalEntity edited +
Pathway edited +
Polymerisation edited +
ChemicalDrug authored 1
CandidateSet authored 1
DefinedSet authored 1
Drug authored 1
Depolymerisation authored +
EntitySet authored 1
OtherEntity authored 1
Complex authored 1
FailedReaction authored +
Cell authored 1
GenomeEncodedEntity authored 1
InteractionEvent authored +
SimpleEntity authored 1
Polymer authored 1
RNADrug authored 1
BlackBoxEvent authored +
ReactionlikeEvent authored +
ProteinDrug authored 1
CellLineagePath authored +
CellDevelopmentStep authored +
Event authored +
EntityWithAccessionedSequence authored 1
Reaction authored +
Polymerisation authored +
Pathway authored +
PhysicalEntity authored 1
GenomeEncodedEntity revised +
Cell revised +
FailedReaction revised +
RNADrug revised +
InteractionEvent revised +
SimpleEntity revised +
Polymer revised +
CandidateSet revised +
ChemicalDrug revised +
Complex revised +
OtherEntity revised +
EntitySet revised +
DefinedSet revised +
Depolymerisation revised +
Drug revised +
Reaction revised +
EntityWithAccessionedSequence revised +
Pathway revised +
PhysicalEntity revised +
Polymerisation revised +
CellLineagePath revised +
BlackBoxEvent revised +
ReactionlikeEvent revised +
ProteinDrug revised +
Event revised +
CellDevelopmentStep revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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