Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Drug edited +
RNADrug edited +
Pathway edited +
InteractionEvent edited +
ProteinDrug edited +
ChemicalDrug edited +
ReactionlikeEvent edited +
OtherEntity edited +
BlackBoxEvent edited +
EntitySet edited +
DefinedSet edited +
CandidateSet edited +
GenomeEncodedEntity edited +
CellDevelopmentStep edited +
Depolymerisation edited +
Polymer edited +
Event edited +
PhysicalEntity edited +
Polymerisation edited +
Complex edited +
FailedReaction edited +
EntityWithAccessionedSequence edited +
SimpleEntity edited +
CellLineagePath edited +
Cell edited +
Reaction edited +
Drug authored 1
ChemicalDrug authored 1
ReactionlikeEvent authored +
Pathway authored +
RNADrug authored 1
InteractionEvent authored +
ProteinDrug authored 1
EntitySet authored 1
DefinedSet authored 1
OtherEntity authored 1
BlackBoxEvent authored +
CellDevelopmentStep authored +
GenomeEncodedEntity authored 1
CandidateSet authored 1
PhysicalEntity authored 1
Polymerisation authored +
Depolymerisation authored +
Polymer authored 1
Event authored +
Complex authored 1
SimpleEntity authored 1
EntityWithAccessionedSequence authored 1
CellLineagePath authored +
FailedReaction authored +
Reaction authored +
Cell authored 1
ChemicalDrug modified +
InterChainCrosslinkedResidue modified +
RNADrug modified +
GeneticallyModifiedResidue modified +
CatalystActivityReference modified +
URL modified +
TranscriptionalModification modified +
StableIdentifier modified +
CellDevelopmentStep modified +
ReplacedResidue modified +
PhysicalEntityCellType modified +
ReferenceTherapeutic modified +
PositiveRegulation modified +
RegulationReference modified +
Complex modified +
PhysicalEntity modified +
Polymerisation modified +
PsiMod modified +
Person modified +
Event modified +
Depolymerisation modified +
ExternalOntology modified +
Reaction modified +
RetractionStatus modified +
ReferenceGroup modified +
ReferenceIsoform modified +
FunctionalStatus modified +
SimpleEntity modified +
GO_MolecularFunction modified +
Disease modified +
ReactionlikeEvent modified +
DatabaseObject modified +
InteractionEvent modified +
ReferenceGeneProduct modified +
_DeletedInstance modified +
GO_BiologicalProcess modified +
GroupModifiedResidue modified +
GenomeEncodedEntity modified +
Affiliation modified +
ModifiedResidue modified +
ReferenceEntity modified +
EntitySet modified +
ReferenceDNASequence modified +
Figure modified +
CrosslinkedResidue modified +
ModifiedNucleotide modified +
Anatomy modified +
Taxon modified +
NegativeGeneExpressionRegulation modified +
DrugActionType modified +
FunctionalStatusType modified +
Cell modified +
EntityFunctionalStatus modified +
EntityWithAccessionedSequence modified +
ReferenceDatabase modified +
StableIdentifierHistory modified +
Species modified +
Drug modified +
FrontPage modified +
ControlledVocabulary modified +
NegativePrecedingEventReason modified +
CellType modified +
CandidateSet modified +
DefinedSet modified +
FragmentInsertionModification modified +
BlackBoxEvent modified +
OtherEntity modified +
NegativeRegulation modified +
PathwayDiagram modified +
ReviewStatus modified +
StableIdentifierReleaseStatus modified +
Requirement modified +
Polymer modified +
ReferenceRNASequence modified +
FragmentDeletionModification modified +
Compartment modified +
_Release modified +
NegativePrecedingEvent modified +
ReferenceMolecule modified +
CellLineagePath modified +
ReactionType modified +
CatalystActivity modified +
FailedReaction modified +
InstanceEdit modified +
ProteinDrug modified +
LiteratureReference modified +
Pathway modified +
Publication modified +
FragmentModification modified +
Regulation modified +
EvidenceType modified +
DatabaseIdentifier modified +
GO_CellularComponent modified +
Book modified +
ReferenceSequence modified +
_UpdateTracker modified +
AbstractModifiedResidue modified +
_Deleted modified +
NonsenseMutation modified +
ControlReference modified +
TranslationalModification modified +
FragmentReplacedModification modified +
DeletedControlledVocabulary modified +
IntraChainCrosslinkedResidue modified +
Summation modified +
PositiveGeneExpressionRegulation modified +
MarkerReference modified +
SequenceOntology modified +
Disease created 1
GO_MolecularFunction created 1
ReactionlikeEvent created 1
DatabaseObject created 1
InteractionEvent created 1
ReferenceGeneProduct created 1
_DeletedInstance created 1
GO_BiologicalProcess created 1
GroupModifiedResidue created 1
Affiliation created 1
GenomeEncodedEntity created 1
ModifiedResidue created 1
EntitySet created 1
ReferenceEntity created 1
ReferenceDNASequence created 1
Figure created 1
CrosslinkedResidue created 1
ModifiedNucleotide created 1
Anatomy created 1
Taxon created 1
NegativeGeneExpressionRegulation created 1
FunctionalStatusType created 1
DrugActionType created 1
Cell created 1
EntityFunctionalStatus created 1
EntityWithAccessionedSequence created 1
ChemicalDrug created 1
InterChainCrosslinkedResidue created 1
RNADrug created 1
GeneticallyModifiedResidue created 1
CatalystActivityReference created 1
URL created 1
TranscriptionalModification created 1
CellDevelopmentStep created 1
StableIdentifier created 1
ReplacedResidue created 1
PhysicalEntityCellType created 1
ReferenceTherapeutic created 1
PositiveRegulation created 1
RegulationReference created 1
Complex created 1
PhysicalEntity created 1
Polymerisation created 1
PsiMod created 1
Person created 1
Event created 1
Depolymerisation created 1
ExternalOntology created 1
Reaction created 1
RetractionStatus created 1
FunctionalStatus created 1
ReferenceGroup created 1
ReferenceIsoform created 1
SimpleEntity created 1
ProteinDrug created 1
LiteratureReference created 1
Publication created 1
Pathway created 1
Regulation created 1
FragmentModification created 1
EvidenceType created 1
DatabaseIdentifier created 1
GO_CellularComponent created 1
Book created 1
ReferenceSequence created 1
_UpdateTracker created 1
AbstractModifiedResidue created 1
_Deleted created 1
NonsenseMutation created 1
ControlReference created 1
TranslationalModification created 1
DeletedControlledVocabulary created 1
FragmentReplacedModification created 1
IntraChainCrosslinkedResidue created 1
Summation created 1
PositiveGeneExpressionRegulation created 1
MarkerReference created 1
SequenceOntology created 1
ReferenceDatabase created 1
StableIdentifierHistory created 1
Species created 1
Drug created 1
FrontPage created 1
ControlledVocabulary created 1
NegativePrecedingEventReason created 1
CellType created 1
CandidateSet created 1
DefinedSet created 1
FragmentInsertionModification created 1
BlackBoxEvent created 1
OtherEntity created 1
PathwayDiagram created 1
NegativeRegulation created 1
ReviewStatus created 1
StableIdentifierReleaseStatus created 1
Requirement created 1
ReferenceRNASequence created 1
Polymer created 1
FragmentDeletionModification created 1
Compartment created 1
_Release created 1
NegativePrecedingEvent created 1
CellLineagePath created 1
ReferenceMolecule created 1
ReactionType created 1
CatalystActivity created 1
InstanceEdit created 1
FailedReaction created 1
_Deleted replacementInstances +
CellLineagePath structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
InteractionEvent structureModified +
Cell revised +
Reaction revised +
FailedReaction revised +
EntityWithAccessionedSequence revised +
SimpleEntity revised +
CellLineagePath revised +
Complex revised +
Depolymerisation revised +
Event revised +
Polymer revised +
Polymerisation revised +
PhysicalEntity revised +
CandidateSet revised +
GenomeEncodedEntity revised +
CellDevelopmentStep revised +
OtherEntity revised +
BlackBoxEvent revised +
EntitySet revised +
DefinedSet revised +
RNADrug revised +
Pathway revised +
InteractionEvent revised +
ProteinDrug revised +
ChemicalDrug revised +
ReactionlikeEvent revised +
Drug revised +
Reaction reviewed +
Cell reviewed +
CellLineagePath reviewed +
EntityWithAccessionedSequence reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
Complex reviewed +
Polymerisation reviewed +
PhysicalEntity reviewed +
Depolymerisation reviewed +
Polymer reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
CellDevelopmentStep reviewed +
CandidateSet reviewed +
EntitySet reviewed +
DefinedSet reviewed +
OtherEntity reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
Pathway reviewed +
RNADrug reviewed +
InteractionEvent reviewed +
ProteinDrug reviewed +
Drug reviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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