Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InteractionEvent structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
Reaction structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
PhysicalEntity revised +
CellLineagePath revised +
Cell revised +
ProteinDrug revised +
ChemicalDrug revised +
Polymerisation revised +
CandidateSet revised +
InteractionEvent revised +
Polymer revised +
FailedReaction revised +
Depolymerisation revised +
Reaction revised +
DefinedSet revised +
OtherEntity revised +
Drug revised +
Pathway revised +
GenomeEncodedEntity revised +
ReactionlikeEvent revised +
Event revised +
RNADrug revised +
CellDevelopmentStep revised +
Complex revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
BlackBoxEvent revised +
SimpleEntity revised +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
DefinedSet authored 1
Reaction authored +
Pathway authored +
Drug authored 1
GenomeEncodedEntity authored 1
OtherEntity authored 1
Event authored +
ReactionlikeEvent authored +
RNADrug authored 1
CellDevelopmentStep authored +
Complex authored 1
Depolymerisation authored +
FailedReaction authored +
Polymer authored 1
EntitySet authored 1
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
SimpleEntity authored 1
PhysicalEntity authored 1
CellLineagePath authored +
Cell authored 1
CandidateSet authored 1
InteractionEvent authored +
ProteinDrug authored 1
ChemicalDrug authored 1
Polymerisation authored +
NegativePrecedingEventReason modified +
Regulation modified +
ReferenceIsoform modified +
ReferenceRNASequence modified +
FragmentDeletionModification modified +
ReferenceEntity modified +
ReferenceGroup modified +
Affiliation modified +
NegativeRegulation modified +
EntitySet modified +
TranslationalModification modified +
CatalystActivity modified +
ReferenceDatabase modified +
RNADrug modified +
Figure modified +
ReplacedResidue modified +
FunctionalStatus modified +
ReferenceTherapeutic modified +
Depolymerisation modified +
Polymer modified +
RegulationReference modified +
GroupModifiedResidue modified +
Polymerisation modified +
FunctionalStatusType modified +
Summation modified +
TranscriptionalModification modified +
RetractionStatus modified +
DrugActionType modified +
ReactionType modified +
GO_MolecularFunction modified +
FragmentReplacedModification modified +
ReviewStatus modified +
NegativeGeneExpressionRegulation modified +
InterChainCrosslinkedResidue modified +
PhysicalEntityCellType modified +
CellLineagePath modified +
IntraChainCrosslinkedResidue modified +
ModifiedResidue modified +
GO_CellularComponent modified +
ReferenceSequence modified +
EntityWithAccessionedSequence modified +
PositiveGeneExpressionRegulation modified +
OtherEntity modified +
Pathway modified +
ReactionlikeEvent modified +
Event modified +
Reaction modified +
Book modified +
Species modified +
EvidenceType modified +
DatabaseObject modified +
EntityFunctionalStatus modified +
CandidateSet modified +
SequenceOntology modified +
Taxon modified +
ProteinDrug modified +
Compartment modified +
StableIdentifierHistory modified +
CrosslinkedResidue modified +
NonsenseMutation modified +
StableIdentifier modified +
MarkerReference modified +
ModifiedNucleotide modified +
NegativePrecedingEvent modified +
FragmentModification modified +
Anatomy modified +
SimpleEntity modified +
AbstractModifiedResidue modified +
Drug modified +
InstanceEdit modified +
DefinedSet modified +
_Release modified +
PsiMod modified +
ReferenceGeneProduct modified +
FrontPage modified +
InteractionEvent modified +
URL modified +
PositiveRegulation modified +
_UpdateTracker modified +
ReferenceMolecule modified +
ChemicalDrug modified +
CatalystActivityReference modified +
LiteratureReference modified +
ExternalOntology modified +
ControlReference modified +
Requirement modified +
Publication modified +
PathwayDiagram modified +
StableIdentifierReleaseStatus modified +
Person modified +
Cell modified +
ControlledVocabulary modified +
_DeletedInstance modified +
PhysicalEntity modified +
CellType modified +
DatabaseIdentifier modified +
ReferenceDNASequence modified +
GeneticallyModifiedResidue modified +
BlackBoxEvent modified +
DeletedControlledVocabulary modified +
GenomeEncodedEntity modified +
CellDevelopmentStep modified +
Complex modified +
Disease modified +
GO_BiologicalProcess modified +
FragmentInsertionModification modified +
_Deleted modified +
FailedReaction modified +
EntityWithAccessionedSequence reviewed +
EntitySet reviewed +
BlackBoxEvent reviewed +
SimpleEntity reviewed +
DefinedSet reviewed +
Reaction reviewed +
Drug reviewed +
Pathway reviewed +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
Complex reviewed +
Event reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
RNADrug reviewed +
FailedReaction reviewed +
Polymer reviewed +
Depolymerisation reviewed +
CandidateSet reviewed +
InteractionEvent reviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
Polymerisation reviewed +
PhysicalEntity reviewed +
CellLineagePath reviewed +
Cell reviewed +
Reaction edited +
DefinedSet edited +
OtherEntity edited +
Drug edited +
GenomeEncodedEntity edited +
Pathway edited +
Complex edited +
ReactionlikeEvent edited +
RNADrug edited +
Event edited +
CellDevelopmentStep edited +
Depolymerisation edited +
FailedReaction edited +
Polymer edited +
EntityWithAccessionedSequence edited +
EntitySet edited +
BlackBoxEvent edited +
SimpleEntity edited +
PhysicalEntity edited +
CellLineagePath edited +
Cell edited +
CandidateSet edited +
InteractionEvent edited +
ProteinDrug edited +
ChemicalDrug edited +
Polymerisation edited +
_Deleted replacementInstances +
FragmentModification created 1
NegativePrecedingEvent created 1
StableIdentifier created 1
MarkerReference created 1
ModifiedNucleotide created 1
CrosslinkedResidue created 1
NonsenseMutation created 1
StableIdentifierHistory created 1
ProteinDrug created 1
Compartment created 1
SequenceOntology created 1
Taxon created 1
DatabaseObject created 1
EntityFunctionalStatus created 1
CandidateSet created 1
EvidenceType created 1
ReferenceGeneProduct created 1
DefinedSet created 1
_Release created 1
PsiMod created 1
Drug created 1
InstanceEdit created 1
AbstractModifiedResidue created 1
SimpleEntity created 1
Anatomy created 1
PhysicalEntity created 1
_DeletedInstance created 1
Person created 1
StableIdentifierReleaseStatus created 1
ControlledVocabulary created 1
Cell created 1
Requirement created 1
ControlReference created 1
ExternalOntology created 1
PathwayDiagram created 1
Publication created 1
LiteratureReference created 1
ReferenceMolecule created 1
_UpdateTracker created 1
ChemicalDrug created 1
CatalystActivityReference created 1
URL created 1
PositiveRegulation created 1
FrontPage created 1
InteractionEvent created 1
_Deleted created 1
FailedReaction created 1
GO_BiologicalProcess created 1
FragmentInsertionModification created 1
GenomeEncodedEntity created 1
Complex created 1
CellDevelopmentStep created 1
Disease created 1
GeneticallyModifiedResidue created 1
DeletedControlledVocabulary created 1
BlackBoxEvent created 1
ReferenceDNASequence created 1
CellType created 1
DatabaseIdentifier created 1
ReferenceEntity created 1
FragmentDeletionModification created 1
ReferenceRNASequence created 1
Regulation created 1
ReferenceIsoform created 1
NegativePrecedingEventReason created 1
RegulationReference created 1
Depolymerisation created 1
Polymer created 1
ReferenceTherapeutic created 1
ReplacedResidue created 1
FunctionalStatus created 1
ReferenceDatabase created 1
RNADrug created 1
Figure created 1
TranslationalModification created 1
EntitySet created 1
CatalystActivity created 1
Affiliation created 1
NegativeRegulation created 1
ReferenceGroup created 1
CellLineagePath created 1
NegativeGeneExpressionRegulation created 1
PhysicalEntityCellType created 1
InterChainCrosslinkedResidue created 1
FragmentReplacedModification created 1
ReviewStatus created 1
TranscriptionalModification created 1
DrugActionType created 1
ReactionType created 1
GO_MolecularFunction created 1
RetractionStatus created 1
Polymerisation created 1
FunctionalStatusType created 1
Summation created 1
GroupModifiedResidue created 1
Species created 1
Reaction created 1
Book created 1
Pathway created 1
OtherEntity created 1
ReactionlikeEvent created 1
Event created 1
ReferenceSequence created 1
EntityWithAccessionedSequence created 1
GO_CellularComponent created 1
PositiveGeneExpressionRegulation created 1
ModifiedResidue created 1
IntraChainCrosslinkedResidue created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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