Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellLineagePath edited +
Complex edited +
DefinedSet edited +
FailedReaction edited +
EntitySet edited +
CandidateSet edited +
OtherEntity edited +
Event edited +
SimpleEntity edited +
RNADrug edited +
EntityWithAccessionedSequence edited +
InteractionEvent edited +
ProteinDrug edited +
Reaction edited +
BlackBoxEvent edited +
Polymer edited +
CellDevelopmentStep edited +
PhysicalEntity edited +
Depolymerisation edited +
Drug edited +
Pathway edited +
ChemicalDrug edited +
Polymerisation edited +
GenomeEncodedEntity edited +
Cell edited +
ReactionlikeEvent edited +
Pathway internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
_Deleted replacementInstances +
ControlReference modified +
SequenceOntology modified +
URL modified +
ReactionlikeEvent modified +
Affiliation modified +
Drug modified +
CellDevelopmentStep modified +
GroupModifiedResidue modified +
Polymer modified +
NonsenseMutation modified +
Depolymerisation modified +
DatabaseObject modified +
PsiMod modified +
EntityWithAccessionedSequence modified +
CellType modified +
Publication modified +
Requirement modified +
ExternalOntology modified +
InterChainCrosslinkedResidue modified +
Species modified +
_DeletedInstance modified +
GO_BiologicalProcess modified +
NegativeRegulation modified +
Regulation modified +
StableIdentifierHistory modified +
RetractionStatus modified +
CellLineagePath modified +
Summation modified +
PathwayDiagram modified +
ReplacedResidue modified +
Polymerisation modified +
StableIdentifierReleaseStatus modified +
FrontPage modified +
Cell modified +
Taxon modified +
TranslationalModification modified +
BlackBoxEvent modified +
_UpdateTracker modified +
PositiveGeneExpressionRegulation modified +
FragmentDeletionModification modified +
ReferenceDatabase modified +
StableIdentifier modified +
Figure modified +
NegativeGeneExpressionRegulation modified +
FunctionalStatus modified +
Event modified +
ReferenceDNASequence modified +
DeletedControlledVocabulary modified +
GO_MolecularFunction modified +
Compartment modified +
OtherEntity modified +
_Release modified +
ReviewStatus modified +
InstanceEdit modified +
CandidateSet modified +
DefinedSet modified +
Book modified +
CatalystActivityReference modified +
ChemicalDrug modified +
EvidenceType modified +
ReactionType modified +
ReferenceTherapeutic modified +
ModifiedNucleotide modified +
ProteinDrug modified +
PhysicalEntityCellType modified +
IntraChainCrosslinkedResidue modified +
FunctionalStatusType modified +
ReferenceMolecule modified +
ReferenceEntity modified +
ReferenceGeneProduct modified +
_Deleted modified +
AbstractModifiedResidue modified +
ReferenceSequence modified +
TranscriptionalModification modified +
GeneticallyModifiedResidue modified +
CrosslinkedResidue modified +
EntitySet modified +
ModifiedResidue modified +
DrugActionType modified +
RegulationReference modified +
NegativePrecedingEvent modified +
DatabaseIdentifier modified +
ReferenceRNASequence modified +
Complex modified +
PositiveRegulation modified +
GenomeEncodedEntity modified +
GO_CellularComponent modified +
Pathway modified +
PhysicalEntity modified +
ControlledVocabulary modified +
Reaction modified +
NegativePrecedingEventReason modified +
Disease modified +
LiteratureReference modified +
InteractionEvent modified +
ReferenceIsoform modified +
SimpleEntity modified +
RNADrug modified +
Person modified +
FragmentInsertionModification modified +
ReferenceGroup modified +
EntityFunctionalStatus modified +
Anatomy modified +
FragmentModification modified +
FailedReaction modified +
CatalystActivity modified +
FragmentReplacedModification modified +
MarkerReference modified +
Pathway structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
FailedReaction authored +
DefinedSet authored 1
Complex authored 1
CellLineagePath authored +
Event authored +
OtherEntity authored 1
EntitySet authored 1
CandidateSet authored 1
ProteinDrug authored 1
InteractionEvent authored +
EntityWithAccessionedSequence authored 1
SimpleEntity authored 1
RNADrug authored 1
Polymerisation authored +
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
Cell authored 1
Drug authored 1
ChemicalDrug authored 1
Pathway authored +
CellDevelopmentStep authored +
Polymer authored 1
Depolymerisation authored +
PhysicalEntity authored 1
Reaction authored +
BlackBoxEvent authored +
ReferenceIsoform created 1
RNADrug created 1
SimpleEntity created 1
LiteratureReference created 1
InteractionEvent created 1
ControlledVocabulary created 1
PhysicalEntity created 1
Disease created 1
Reaction created 1
NegativePrecedingEventReason created 1
GenomeEncodedEntity created 1
Pathway created 1
GO_CellularComponent created 1
MarkerReference created 1
FragmentReplacedModification created 1
FailedReaction created 1
FragmentModification created 1
CatalystActivity created 1
EntityFunctionalStatus created 1
ReferenceGroup created 1
Anatomy created 1
Person created 1
FragmentInsertionModification created 1
IntraChainCrosslinkedResidue created 1
FunctionalStatusType created 1
ReferenceMolecule created 1
ReferenceEntity created 1
ProteinDrug created 1
PhysicalEntityCellType created 1
EvidenceType created 1
ModifiedNucleotide created 1
ReactionType created 1
ReferenceTherapeutic created 1
Book created 1
ChemicalDrug created 1
CatalystActivityReference created 1
PositiveRegulation created 1
Complex created 1
ReferenceRNASequence created 1
DrugActionType created 1
ModifiedResidue created 1
DatabaseIdentifier created 1
NegativePrecedingEvent created 1
RegulationReference created 1
GeneticallyModifiedResidue created 1
CrosslinkedResidue created 1
EntitySet created 1
_Deleted created 1
ReferenceGeneProduct created 1
TranscriptionalModification created 1
ReferenceSequence created 1
AbstractModifiedResidue created 1
ReferenceDatabase created 1
StableIdentifier created 1
Figure created 1
_UpdateTracker created 1
FragmentDeletionModification created 1
PositiveGeneExpressionRegulation created 1
BlackBoxEvent created 1
FrontPage created 1
Cell created 1
Polymerisation created 1
StableIdentifierReleaseStatus created 1
Taxon created 1
TranslationalModification created 1
DefinedSet created 1
OtherEntity created 1
_Release created 1
Compartment created 1
InstanceEdit created 1
CandidateSet created 1
ReviewStatus created 1
FunctionalStatus created 1
Event created 1
NegativeGeneExpressionRegulation created 1
GO_MolecularFunction created 1
DeletedControlledVocabulary created 1
ReferenceDNASequence created 1
CellType created 1
Publication created 1
EntityWithAccessionedSequence created 1
Requirement created 1
ExternalOntology created 1
NonsenseMutation created 1
Depolymerisation created 1
CellDevelopmentStep created 1
Polymer created 1
GroupModifiedResidue created 1
PsiMod created 1
DatabaseObject created 1
URL created 1
ReactionlikeEvent created 1
SequenceOntology created 1
ControlReference created 1
Affiliation created 1
Drug created 1
Summation created 1
CellLineagePath created 1
ReplacedResidue created 1
PathwayDiagram created 1
RetractionStatus created 1
NegativeRegulation created 1
Regulation created 1
StableIdentifierHistory created 1
InterChainCrosslinkedResidue created 1
_DeletedInstance created 1
GO_BiologicalProcess created 1
Species created 1
RNADrug reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
InteractionEvent reviewed +
ProteinDrug reviewed +
BlackBoxEvent reviewed +
Reaction reviewed +
Depolymerisation reviewed +
PhysicalEntity reviewed +
CellDevelopmentStep reviewed +
Polymer reviewed +
Pathway reviewed +
ChemicalDrug reviewed +
Drug reviewed +
Cell reviewed +
ReactionlikeEvent reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
Complex reviewed +
CellLineagePath reviewed +
FailedReaction reviewed +
DefinedSet reviewed +
CandidateSet reviewed +
EntitySet reviewed +
OtherEntity reviewed +
Event reviewed +
Event revised +
OtherEntity revised +
CandidateSet revised +
EntitySet revised +
DefinedSet revised +
FailedReaction revised +
Complex revised +
CellLineagePath revised +
Cell revised +
ReactionlikeEvent revised +
GenomeEncodedEntity revised +
Polymerisation revised +
Pathway revised +
ChemicalDrug revised +
Drug revised +
PhysicalEntity revised +
Depolymerisation revised +
CellDevelopmentStep revised +
Polymer revised +
Reaction revised +
BlackBoxEvent revised +
ProteinDrug revised +
InteractionEvent revised +
EntityWithAccessionedSequence revised +
RNADrug revised +
SimpleEntity revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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