Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
GO_BiologicalProcess created 1
Requirement created 1
FunctionalStatusType created 1
ReferenceDNASequence created 1
PathwayDiagram created 1
ReferenceGeneProduct created 1
Book created 1
SequenceOntology created 1
URL created 1
ReplacedResidue created 1
ReferenceDatabase created 1
_Release created 1
_Deleted created 1
FragmentReplacedModification created 1
Figure created 1
Pathway created 1
TranslationalModification created 1
InteractionEvent created 1
Reaction created 1
ProteinDrug created 1
ReferenceMolecule created 1
CatalystActivityReference created 1
BlackBoxEvent created 1
Summation created 1
DrugActionType created 1
Event created 1
ReferenceGroup created 1
NegativeRegulation created 1
Disease created 1
ControlReference created 1
MarkerReference created 1
ExternalOntology created 1
InterChainCrosslinkedResidue created 1
NegativePrecedingEventReason created 1
ReferenceIsoform created 1
StableIdentifierHistory created 1
ControlledVocabulary created 1
GenomeEncodedEntity created 1
Complex created 1
Affiliation created 1
_UpdateTracker created 1
CatalystActivity created 1
Depolymerisation created 1
FragmentModification created 1
DatabaseIdentifier created 1
FailedReaction created 1
DefinedSet created 1
ReactionType created 1
ReviewStatus created 1
ReferenceTherapeutic created 1
RetractionStatus created 1
Person created 1
Drug created 1
InstanceEdit created 1
CellLineagePath created 1
EntitySet created 1
StableIdentifierReleaseStatus created 1
CellDevelopmentStep created 1
RegulationReference created 1
OtherEntity created 1
Species created 1
EntityFunctionalStatus created 1
Regulation created 1
ReferenceSequence created 1
Polymerisation created 1
Polymer created 1
FunctionalStatus created 1
StableIdentifier created 1
GeneticallyModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
FrontPage created 1
ReactionlikeEvent created 1
GroupModifiedResidue created 1
PhysicalEntityCellType created 1
EntityWithAccessionedSequence created 1
EvidenceType created 1
CellType created 1
LiteratureReference created 1
DatabaseObject created 1
AbstractModifiedResidue created 1
ModifiedResidue created 1
NonsenseMutation created 1
PositiveRegulation created 1
PsiMod created 1
Taxon created 1
TranscriptionalModification created 1
GO_MolecularFunction created 1
SimpleEntity created 1
Cell created 1
DeletedControlledVocabulary created 1
ReferenceEntity created 1
NegativePrecedingEvent created 1
GO_CellularComponent created 1
RNADrug created 1
FragmentInsertionModification created 1
ReferenceRNASequence created 1
PhysicalEntity created 1
Anatomy created 1
CandidateSet created 1
_DeletedInstance created 1
ChemicalDrug created 1
IntraChainCrosslinkedResidue created 1
PositiveGeneExpressionRegulation created 1
ModifiedNucleotide created 1
CrosslinkedResidue created 1
Publication created 1
FragmentDeletionModification created 1
Compartment created 1
ModifiedNucleotide modified +
PositiveGeneExpressionRegulation modified +
IntraChainCrosslinkedResidue modified +
Publication modified +
CrosslinkedResidue modified +
FragmentDeletionModification modified +
Compartment modified +
CandidateSet modified +
_DeletedInstance modified +
ChemicalDrug modified +
DeletedControlledVocabulary modified +
FragmentInsertionModification modified +
ReferenceRNASequence modified +
ReferenceEntity modified +
NegativePrecedingEvent modified +
GO_CellularComponent modified +
RNADrug modified +
PhysicalEntity modified +
Anatomy modified +
Taxon modified +
PsiMod modified +
TranscriptionalModification modified +
SimpleEntity modified +
GO_MolecularFunction modified +
Cell modified +
EvidenceType modified +
LiteratureReference modified +
CellType modified +
AbstractModifiedResidue modified +
DatabaseObject modified +
PositiveRegulation modified +
ModifiedResidue modified +
NonsenseMutation modified +
FrontPage modified +
PhysicalEntityCellType modified +
GroupModifiedResidue modified +
ReactionlikeEvent modified +
EntityWithAccessionedSequence modified +
NegativeGeneExpressionRegulation modified +
Polymerisation modified +
FunctionalStatus modified +
Polymer modified +
StableIdentifier modified +
GeneticallyModifiedResidue modified +
StableIdentifierReleaseStatus modified +
CellDevelopmentStep modified +
OtherEntity modified +
RegulationReference modified +
Species modified +
EntityFunctionalStatus modified +
Regulation modified +
ReferenceSequence modified +
CellLineagePath modified +
EntitySet modified +
ReferenceTherapeutic modified +
ReviewStatus modified +
ReactionType modified +
Person modified +
RetractionStatus modified +
InstanceEdit modified +
Drug modified +
GenomeEncodedEntity modified +
Affiliation modified +
ControlledVocabulary modified +
Complex modified +
StableIdentifierHistory modified +
_UpdateTracker modified +
CatalystActivity modified +
Depolymerisation modified +
FailedReaction modified +
DefinedSet modified +
DatabaseIdentifier modified +
FragmentModification modified +
Summation modified +
Event modified +
ReferenceGroup modified +
DrugActionType modified +
Disease modified +
NegativeRegulation modified +
NegativePrecedingEventReason modified +
ReferenceIsoform modified +
ControlReference modified +
MarkerReference modified +
InterChainCrosslinkedResidue modified +
ExternalOntology modified +
Figure modified +
FragmentReplacedModification modified +
_Deleted modified +
InteractionEvent modified +
TranslationalModification modified +
Pathway modified +
Reaction modified +
CatalystActivityReference modified +
BlackBoxEvent modified +
ReferenceMolecule modified +
ProteinDrug modified +
SequenceOntology modified +
URL modified +
ReplacedResidue modified +
ReferenceDatabase modified +
_Release modified +
GO_BiologicalProcess modified +
FunctionalStatusType modified +
ReferenceDNASequence modified +
Requirement modified +
PathwayDiagram modified +
Book modified +
ReferenceGeneProduct modified +
_Deleted replacementInstances +
ProteinDrug reviewed +
EntityWithAccessionedSequence reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
Reaction reviewed +
ReactionlikeEvent reviewed +
EntitySet reviewed +
Pathway reviewed +
CandidateSet reviewed +
CellLineagePath reviewed +
InteractionEvent reviewed +
Event reviewed +
OtherEntity reviewed +
CellDevelopmentStep reviewed +
DefinedSet reviewed +
Cell reviewed +
FailedReaction reviewed +
SimpleEntity reviewed +
Depolymerisation reviewed +
Polymer reviewed +
Polymerisation reviewed +
GenomeEncodedEntity reviewed +
Complex reviewed +
Drug reviewed +
PhysicalEntity reviewed +
RNADrug reviewed +
CellDevelopmentStep authored +
Event authored +
OtherEntity authored 1
ReactionlikeEvent authored +
Reaction authored +
EntitySet authored 1
BlackBoxEvent authored +
ChemicalDrug authored 1
ProteinDrug authored 1
EntityWithAccessionedSequence authored 1
InteractionEvent authored +
CellLineagePath authored +
Pathway authored +
CandidateSet authored 1
PhysicalEntity authored 1
Drug authored 1
RNADrug authored 1
SimpleEntity authored 1
Depolymerisation authored +
FailedReaction authored +
Cell authored 1
DefinedSet authored 1
Complex authored 1
GenomeEncodedEntity authored 1
Polymerisation authored +
Polymer authored 1
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Event structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Polymerisation structureModified +
EntitySet edited +
ReactionlikeEvent edited +
Reaction edited +
ChemicalDrug edited +
BlackBoxEvent edited +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
InteractionEvent edited +
CellLineagePath edited +
Pathway edited +
CandidateSet edited +
CellDevelopmentStep edited +
Event edited +
OtherEntity edited +
Depolymerisation edited +
SimpleEntity edited +
Cell edited +
DefinedSet edited +
FailedReaction edited +
GenomeEncodedEntity edited +
Complex edited +
Polymerisation edited +
Polymer edited +
PhysicalEntity edited +
Drug edited +
RNADrug edited +
Event revised +
OtherEntity revised +
CellDevelopmentStep revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
ChemicalDrug revised +
BlackBoxEvent revised +
EntitySet revised +
ReactionlikeEvent revised +
Reaction revised +
CandidateSet revised +
Pathway revised +
CellLineagePath revised +
InteractionEvent revised +
Drug revised +
PhysicalEntity revised +
RNADrug revised +
FailedReaction revised +
Cell revised +
DefinedSet revised +
Depolymerisation revised +
SimpleEntity revised +
Polymer revised +
Polymerisation revised +
Complex revised +
GenomeEncodedEntity revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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