Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
SimpleEntity reviewed +
Reaction reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
DefinedSet reviewed +
Complex reviewed +
InteractionEvent reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
RNADrug reviewed +
OtherEntity reviewed +
CellLineagePath reviewed +
EntitySet reviewed +
Polymer reviewed +
FailedReaction reviewed +
Polymerisation reviewed +
Event reviewed +
ProteinDrug reviewed +
Drug reviewed +
Cell reviewed +
Pathway reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
PhysicalEntity reviewed +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
Event structureModified +
InteractionEvent structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Polymer revised +
EntitySet revised +
Event revised +
Polymerisation revised +
FailedReaction revised +
Pathway revised +
Cell revised +
Drug revised +
ProteinDrug revised +
PhysicalEntity revised +
Depolymerisation revised +
BlackBoxEvent revised +
Reaction revised +
SimpleEntity revised +
InteractionEvent revised +
Complex revised +
ReactionlikeEvent revised +
CellDevelopmentStep revised +
DefinedSet revised +
GenomeEncodedEntity revised +
CandidateSet revised +
EntityWithAccessionedSequence revised +
ChemicalDrug revised +
CellLineagePath revised +
OtherEntity revised +
RNADrug revised +
Reaction internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
ReferenceSequence modified +
RetractionStatus modified +
Book modified +
Taxon modified +
GO_BiologicalProcess modified +
CatalystActivityReference modified +
NegativePrecedingEvent modified +
ReferenceDatabase modified +
Requirement modified +
_Release modified +
EntityFunctionalStatus modified +
PsiMod modified +
DatabaseIdentifier modified +
LiteratureReference modified +
Compartment modified +
NegativeRegulation modified +
GO_CellularComponent modified +
CellLineagePath modified +
FragmentModification modified +
StableIdentifierHistory modified +
ControlledVocabulary modified +
ReactionType modified +
PhysicalEntityCellType modified +
Regulation modified +
CandidateSet modified +
Publication modified +
FragmentInsertionModification modified +
Cell modified +
BlackBoxEvent modified +
PositiveRegulation modified +
FailedReaction modified +
ModifiedNucleotide modified +
IntraChainCrosslinkedResidue modified +
StableIdentifierReleaseStatus modified +
Polymerisation modified +
StableIdentifier modified +
MarkerReference modified +
EntityWithAccessionedSequence modified +
ChemicalDrug modified +
NegativeGeneExpressionRegulation modified +
FragmentDeletionModification modified +
FunctionalStatusType modified +
EvidenceType modified +
CatalystActivity modified +
TranslationalModification modified +
Disease modified +
SimpleEntity modified +
PositiveGeneExpressionRegulation modified +
Figure modified +
ReactionlikeEvent modified +
InteractionEvent modified +
GO_MolecularFunction modified +
ModifiedResidue modified +
ControlReference modified +
ProteinDrug modified +
Drug modified +
ReferenceRNASequence modified +
InterChainCrosslinkedResidue modified +
ReplacedResidue modified +
ReferenceMolecule modified +
FrontPage modified +
SequenceOntology modified +
EntitySet modified +
NonsenseMutation modified +
Polymer modified +
Anatomy modified +
DeletedControlledVocabulary modified +
CrosslinkedResidue modified +
ReferenceEntity modified +
Event modified +
GeneticallyModifiedResidue modified +
OtherEntity modified +
ReferenceDNASequence modified +
FragmentReplacedModification modified +
CellDevelopmentStep modified +
DefinedSet modified +
AbstractModifiedResidue modified +
NegativePrecedingEventReason modified +
Complex modified +
Pathway modified +
_UpdateTracker modified +
Species modified +
ReviewStatus modified +
PhysicalEntity modified +
Summation modified +
Depolymerisation modified +
Affiliation modified +
InstanceEdit modified +
DatabaseObject modified +
_DeletedInstance modified +
CellType modified +
ReferenceIsoform modified +
URL modified +
DrugActionType modified +
RegulationReference modified +
ExternalOntology modified +
GroupModifiedResidue modified +
RNADrug modified +
_Deleted modified +
FunctionalStatus modified +
PathwayDiagram modified +
ReferenceGeneProduct modified +
Person modified +
TranscriptionalModification modified +
ReferenceTherapeutic modified +
ReferenceGroup modified +
Reaction modified +
GenomeEncodedEntity modified +
OtherEntity created 1
GeneticallyModifiedResidue created 1
AbstractModifiedResidue created 1
CellDevelopmentStep created 1
DefinedSet created 1
Complex created 1
NegativePrecedingEventReason created 1
ReferenceDNASequence created 1
FragmentReplacedModification created 1
FrontPage created 1
ReferenceMolecule created 1
SequenceOntology created 1
Drug created 1
ProteinDrug created 1
ReferenceRNASequence created 1
ReplacedResidue created 1
InterChainCrosslinkedResidue created 1
DeletedControlledVocabulary created 1
CrosslinkedResidue created 1
Event created 1
ReferenceEntity created 1
EntitySet created 1
Anatomy created 1
Polymer created 1
NonsenseMutation created 1
FunctionalStatus created 1
_Deleted created 1
RNADrug created 1
ExternalOntology created 1
GroupModifiedResidue created 1
ReferenceGeneProduct created 1
PathwayDiagram created 1
RegulationReference created 1
GenomeEncodedEntity created 1
ReferenceTherapeutic created 1
ReferenceGroup created 1
TranscriptionalModification created 1
Person created 1
Reaction created 1
ReviewStatus created 1
Affiliation created 1
Depolymerisation created 1
PhysicalEntity created 1
Summation created 1
_UpdateTracker created 1
Species created 1
Pathway created 1
URL created 1
ReferenceIsoform created 1
DrugActionType created 1
_DeletedInstance created 1
DatabaseObject created 1
InstanceEdit created 1
CellType created 1
NegativeRegulation created 1
LiteratureReference created 1
Compartment created 1
StableIdentifierHistory created 1
FragmentModification created 1
ControlledVocabulary created 1
GO_CellularComponent created 1
CellLineagePath created 1
EntityFunctionalStatus created 1
PsiMod created 1
DatabaseIdentifier created 1
CandidateSet created 1
Publication created 1
FragmentInsertionModification created 1
ReactionType created 1
Regulation created 1
PhysicalEntityCellType created 1
RetractionStatus created 1
Book created 1
ReferenceSequence created 1
ReferenceDatabase created 1
_Release created 1
Requirement created 1
Taxon created 1
GO_BiologicalProcess created 1
CatalystActivityReference created 1
NegativePrecedingEvent created 1
NegativeGeneExpressionRegulation created 1
EvidenceType created 1
CatalystActivity created 1
FunctionalStatusType created 1
FragmentDeletionModification created 1
EntityWithAccessionedSequence created 1
MarkerReference created 1
ChemicalDrug created 1
StableIdentifier created 1
Figure created 1
ReactionlikeEvent created 1
ControlReference created 1
ModifiedResidue created 1
GO_MolecularFunction created 1
InteractionEvent created 1
SimpleEntity created 1
TranslationalModification created 1
Disease created 1
PositiveGeneExpressionRegulation created 1
BlackBoxEvent created 1
PositiveRegulation created 1
Cell created 1
FailedReaction created 1
StableIdentifierReleaseStatus created 1
Polymerisation created 1
IntraChainCrosslinkedResidue created 1
ModifiedNucleotide created 1
RNADrug edited +
OtherEntity edited +
CellLineagePath edited +
ChemicalDrug edited +
EntityWithAccessionedSequence edited +
CandidateSet edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
CellDevelopmentStep edited +
DefinedSet edited +
Complex edited +
InteractionEvent edited +
SimpleEntity edited +
Reaction edited +
BlackBoxEvent edited +
Depolymerisation edited +
PhysicalEntity edited +
ProteinDrug edited +
Drug edited +
Cell edited +
Pathway edited +
FailedReaction edited +
Polymerisation edited +
Event edited +
EntitySet edited +
Polymer edited +
_Deleted replacementInstances +
ChemicalDrug authored 1
EntityWithAccessionedSequence authored 1
CellLineagePath authored +
RNADrug authored 1
OtherEntity authored 1
Reaction authored +
SimpleEntity authored 1
Complex authored 1
InteractionEvent authored +
CandidateSet authored 1
GenomeEncodedEntity authored 1
CellDevelopmentStep authored +
ReactionlikeEvent authored +
DefinedSet authored 1
Cell authored 1
Pathway authored +
Drug authored 1
ProteinDrug authored 1
Depolymerisation authored +
PhysicalEntity authored 1
BlackBoxEvent authored +
Polymer authored 1
EntitySet authored 1
Polymerisation authored +
Event authored +
FailedReaction authored +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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