Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
OtherEntity revised +
Drug revised +
Reaction revised +
Pathway revised +
CellDevelopmentStep revised +
RNADrug revised +
ReactionlikeEvent revised +
Polymerisation revised +
SimpleEntity revised +
Event revised +
EntityWithAccessionedSequence revised +
Cell revised +
FailedReaction revised +
Depolymerisation revised +
DefinedSet revised +
GenomeEncodedEntity revised +
EntitySet revised +
InteractionEvent revised +
Complex revised +
PhysicalEntity revised +
Polymer revised +
ProteinDrug revised +
ChemicalDrug revised +
BlackBoxEvent revised +
CellLineagePath revised +
CandidateSet revised +
OtherEntity edited +
RNADrug edited +
CellDevelopmentStep edited +
Pathway edited +
Reaction edited +
Drug edited +
Polymerisation edited +
ReactionlikeEvent edited +
Depolymerisation edited +
Event edited +
EntityWithAccessionedSequence edited +
FailedReaction edited +
Cell edited +
SimpleEntity edited +
EntitySet edited +
Complex edited +
InteractionEvent edited +
DefinedSet edited +
GenomeEncodedEntity edited +
Polymer edited +
ProteinDrug edited +
PhysicalEntity edited +
CandidateSet edited +
CellLineagePath edited +
BlackBoxEvent edited +
ChemicalDrug edited +
Species created 1
StableIdentifierReleaseStatus created 1
DatabaseIdentifier created 1
ReferenceEntity created 1
Reaction created 1
PathwayDiagram created 1
Drug created 1
ReferenceRNASequence created 1
ReactionType created 1
CellDevelopmentStep created 1
CatalystActivityReference created 1
Regulation created 1
SequenceOntology created 1
Person created 1
OtherEntity created 1
StableIdentifier created 1
BlackBoxEvent created 1
NegativeRegulation created 1
ChemicalDrug created 1
PsiMod created 1
CandidateSet created 1
FragmentReplacedModification created 1
ProteinDrug created 1
FragmentDeletionModification created 1
DatabaseObject created 1
GO_CellularComponent created 1
GenomeEncodedEntity created 1
AbstractModifiedResidue created 1
FrontPage created 1
_Deleted created 1
ReferenceSequence created 1
SimpleEntity created 1
ModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
Anatomy created 1
Book created 1
ExternalOntology created 1
TranscriptionalModification created 1
InstanceEdit created 1
DrugActionType created 1
InterChainCrosslinkedResidue created 1
FunctionalStatusType created 1
ReplacedResidue created 1
CellLineagePath created 1
ReferenceIsoform created 1
RegulationReference created 1
_UpdateTracker created 1
EntityFunctionalStatus created 1
GeneticallyModifiedResidue created 1
Complex created 1
_Release created 1
NegativeGeneExpressionRegulation created 1
CatalystActivity created 1
Cell created 1
Depolymerisation created 1
ReactionlikeEvent created 1
ReviewStatus created 1
EvidenceType created 1
Pathway created 1
_DeletedInstance created 1
CrosslinkedResidue created 1
NegativePrecedingEvent created 1
RNADrug created 1
Summation created 1
ReferenceGroup created 1
ControlReference created 1
IntraChainCrosslinkedResidue created 1
Compartment created 1
ReferenceDatabase created 1
CellType created 1
FunctionalStatus created 1
Disease created 1
FragmentModification created 1
ControlledVocabulary created 1
Figure created 1
DefinedSet created 1
GO_BiologicalProcess created 1
Taxon created 1
NegativePrecedingEventReason created 1
EntitySet created 1
Event created 1
GroupModifiedResidue created 1
ReferenceDNASequence created 1
ReferenceGeneProduct created 1
Polymerisation created 1
GO_MolecularFunction created 1
StableIdentifierHistory created 1
TranslationalModification created 1
Affiliation created 1
DeletedControlledVocabulary created 1
NonsenseMutation created 1
RetractionStatus created 1
Requirement created 1
FragmentInsertionModification created 1
URL created 1
PhysicalEntityCellType created 1
PositiveRegulation created 1
Publication created 1
Polymer created 1
ModifiedNucleotide created 1
PhysicalEntity created 1
ReferenceMolecule created 1
InteractionEvent created 1
ReferenceTherapeutic created 1
MarkerReference created 1
EntityWithAccessionedSequence created 1
FailedReaction created 1
LiteratureReference created 1
Compartment modified +
IntraChainCrosslinkedResidue modified +
ReferenceGroup modified +
ControlReference modified +
ReferenceDatabase modified +
ReactionlikeEvent modified +
ReviewStatus modified +
EvidenceType modified +
Pathway modified +
_DeletedInstance modified +
RNADrug modified +
NegativePrecedingEvent modified +
Summation modified +
CrosslinkedResidue modified +
DefinedSet modified +
NegativePrecedingEventReason modified +
EntitySet modified +
Taxon modified +
GO_BiologicalProcess modified +
Event modified +
GroupModifiedResidue modified +
CellType modified +
FragmentModification modified +
FunctionalStatus modified +
Disease modified +
ControlledVocabulary modified +
Figure modified +
DeletedControlledVocabulary modified +
Affiliation modified +
NonsenseMutation modified +
RetractionStatus modified +
Requirement modified +
ReferenceDNASequence modified +
Polymerisation modified +
GO_MolecularFunction modified +
ReferenceGeneProduct modified +
TranslationalModification modified +
StableIdentifierHistory modified +
InteractionEvent modified +
ReferenceTherapeutic modified +
MarkerReference modified +
EntityWithAccessionedSequence modified +
FailedReaction modified +
LiteratureReference modified +
URL modified +
FragmentInsertionModification modified +
PositiveRegulation modified +
PhysicalEntityCellType modified +
ReferenceMolecule modified +
PhysicalEntity modified +
Publication modified +
Polymer modified +
ModifiedNucleotide modified +
Regulation modified +
SequenceOntology modified +
Person modified +
OtherEntity modified +
StableIdentifier modified +
StableIdentifierReleaseStatus modified +
Species modified +
DatabaseIdentifier modified +
ReferenceEntity modified +
Drug modified +
PathwayDiagram modified +
Reaction modified +
CellDevelopmentStep modified +
CatalystActivityReference modified +
ReferenceRNASequence modified +
ReactionType modified +
GenomeEncodedEntity modified +
GO_CellularComponent modified +
FrontPage modified +
AbstractModifiedResidue modified +
_Deleted modified +
SimpleEntity modified +
ReferenceSequence modified +
ModifiedResidue modified +
ChemicalDrug modified +
NegativeRegulation modified +
BlackBoxEvent modified +
CandidateSet modified +
PsiMod modified +
FragmentDeletionModification modified +
DatabaseObject modified +
FragmentReplacedModification modified +
ProteinDrug modified +
DrugActionType modified +
InterChainCrosslinkedResidue modified +
PositiveGeneExpressionRegulation modified +
Book modified +
Anatomy modified +
InstanceEdit modified +
ExternalOntology modified +
TranscriptionalModification modified +
EntityFunctionalStatus modified +
GeneticallyModifiedResidue modified +
Complex modified +
CatalystActivity modified +
_Release modified +
NegativeGeneExpressionRegulation modified +
Depolymerisation modified +
Cell modified +
FunctionalStatusType modified +
CellLineagePath modified +
ReplacedResidue modified +
_UpdateTracker modified +
ReferenceIsoform modified +
RegulationReference modified +
SimpleEntity authored 1
EntityWithAccessionedSequence authored 1
Event authored +
FailedReaction authored +
Cell authored 1
Depolymerisation authored +
DefinedSet authored 1
GenomeEncodedEntity authored 1
EntitySet authored 1
InteractionEvent authored +
Complex authored 1
PhysicalEntity authored 1
ProteinDrug authored 1
Polymer authored 1
ChemicalDrug authored 1
BlackBoxEvent authored +
CandidateSet authored 1
CellLineagePath authored +
OtherEntity authored 1
Drug authored 1
Reaction authored +
Pathway authored +
CellDevelopmentStep authored +
RNADrug authored 1
ReactionlikeEvent authored +
Polymerisation authored +
Polymerisation structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
Pathway structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
Event structureModified +
FailedReaction structureModified +
RNADrug reviewed +
CellDevelopmentStep reviewed +
Reaction reviewed +
Pathway reviewed +
Drug reviewed +
Polymerisation reviewed +
ReactionlikeEvent reviewed +
OtherEntity reviewed +
ProteinDrug reviewed +
Polymer reviewed +
PhysicalEntity reviewed +
CellLineagePath reviewed +
CandidateSet reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
Event reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
Cell reviewed +
SimpleEntity reviewed +
EntitySet reviewed +
InteractionEvent reviewed +
Complex reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
FailedReaction internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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