Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellDevelopmentStep modified +
EntityFunctionalStatus modified +
ReactionlikeEvent modified +
StableIdentifierReleaseStatus modified +
AbstractModifiedResidue modified +
Figure modified +
Publication modified +
MarkerReference modified +
GenomeEncodedEntity modified +
Person modified +
URL modified +
Compartment modified +
ProteinDrug modified +
Depolymerisation modified +
Reaction modified +
Species modified +
NegativeRegulation modified +
EntitySet modified +
CellLineagePath modified +
ReviewStatus modified +
_DeletedInstance modified +
ExternalOntology modified +
ReferenceEntity modified +
Affiliation modified +
FunctionalStatusType modified +
ReferenceDatabase modified +
FragmentDeletionModification modified +
ReferenceGroup modified +
NegativeGeneExpressionRegulation modified +
Anatomy modified +
CandidateSet modified +
Book modified +
InterChainCrosslinkedResidue modified +
ChemicalDrug modified +
NegativePrecedingEvent modified +
Regulation modified +
Summation modified +
GO_MolecularFunction modified +
GO_BiologicalProcess modified +
PathwayDiagram modified +
PhysicalEntity modified +
ReferenceRNASequence modified +
DrugActionType modified +
SimpleEntity modified +
Polymerisation modified +
FrontPage modified +
PhysicalEntityCellType modified +
DatabaseIdentifier modified +
InstanceEdit modified +
CatalystActivityReference modified +
ReferenceSequence modified +
ReferenceIsoform modified +
RNADrug modified +
TranscriptionalModification modified +
FailedReaction modified +
DeletedControlledVocabulary modified +
ReferenceTherapeutic modified +
ControlledVocabulary modified +
PositiveGeneExpressionRegulation modified +
ReactionType modified +
NegativePrecedingEventReason modified +
FunctionalStatus modified +
DatabaseObject modified +
OtherEntity modified +
ReferenceDNASequence modified +
PsiMod modified +
TranslationalModification modified +
ModifiedNucleotide modified +
PositiveRegulation modified +
FragmentModification modified +
Polymer modified +
ReplacedResidue modified +
GO_CellularComponent modified +
EntityWithAccessionedSequence modified +
GeneticallyModifiedResidue modified +
_Release modified +
Requirement modified +
ControlReference modified +
CrosslinkedResidue modified +
SequenceOntology modified +
CellType modified +
ReferenceGeneProduct modified +
Event modified +
RegulationReference modified +
LiteratureReference modified +
NonsenseMutation modified +
Cell modified +
Taxon modified +
_UpdateTracker modified +
Complex modified +
FragmentReplacedModification modified +
ReferenceMolecule modified +
StableIdentifierHistory modified +
ModifiedResidue modified +
BlackBoxEvent modified +
StableIdentifier modified +
DefinedSet modified +
Disease modified +
EvidenceType modified +
Drug modified +
_Deleted modified +
FragmentInsertionModification modified +
IntraChainCrosslinkedResidue modified +
GroupModifiedResidue modified +
Pathway modified +
CatalystActivity modified +
InteractionEvent modified +
RetractionStatus modified +
DefinedSet authored 1
GenomeEncodedEntity authored 1
SimpleEntity authored 1
Polymer authored 1
OtherEntity authored 1
BlackBoxEvent authored +
PhysicalEntity authored 1
Complex authored 1
CellDevelopmentStep authored +
ReactionlikeEvent authored +
Cell authored 1
ChemicalDrug authored 1
FailedReaction authored +
CandidateSet authored 1
RNADrug authored 1
Pathway authored +
Event authored +
InteractionEvent authored +
Drug authored 1
Depolymerisation authored +
ProteinDrug authored 1
EntityWithAccessionedSequence authored 1
Polymerisation authored +
Reaction authored +
EntitySet authored 1
CellLineagePath authored +
Reaction internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
Polymer revised +
DefinedSet revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
BlackBoxEvent revised +
PhysicalEntity revised +
OtherEntity revised +
ReactionlikeEvent revised +
Complex revised +
CellDevelopmentStep revised +
ChemicalDrug revised +
FailedReaction revised +
Cell revised +
RNADrug revised +
CandidateSet revised +
Event revised +
Pathway revised +
InteractionEvent revised +
Drug revised +
CellLineagePath revised +
EntitySet revised +
Depolymerisation revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
Polymerisation revised +
Reaction revised +
Regulation created 1
NegativePrecedingEvent created 1
ChemicalDrug created 1
DrugActionType created 1
SimpleEntity created 1
GO_BiologicalProcess created 1
ReferenceRNASequence created 1
PhysicalEntity created 1
PathwayDiagram created 1
GO_MolecularFunction created 1
Summation created 1
DatabaseIdentifier created 1
PhysicalEntityCellType created 1
FrontPage created 1
Polymerisation created 1
RNADrug created 1
ReferenceIsoform created 1
ReferenceSequence created 1
CatalystActivityReference created 1
InstanceEdit created 1
ReactionlikeEvent created 1
StableIdentifierReleaseStatus created 1
CellDevelopmentStep created 1
EntityFunctionalStatus created 1
Compartment created 1
GenomeEncodedEntity created 1
URL created 1
Person created 1
AbstractModifiedResidue created 1
Figure created 1
Publication created 1
MarkerReference created 1
Affiliation created 1
FunctionalStatusType created 1
CellLineagePath created 1
EntitySet created 1
ReviewStatus created 1
_DeletedInstance created 1
ExternalOntology created 1
ReferenceEntity created 1
Depolymerisation created 1
ProteinDrug created 1
NegativeRegulation created 1
Reaction created 1
Species created 1
InterChainCrosslinkedResidue created 1
Book created 1
CandidateSet created 1
NegativeGeneExpressionRegulation created 1
Anatomy created 1
ReferenceDatabase created 1
FragmentDeletionModification created 1
ReferenceGroup created 1
FragmentReplacedModification created 1
_UpdateTracker created 1
Complex created 1
Cell created 1
Taxon created 1
DefinedSet created 1
Disease created 1
BlackBoxEvent created 1
StableIdentifier created 1
ReferenceMolecule created 1
StableIdentifierHistory created 1
ModifiedResidue created 1
_Deleted created 1
Drug created 1
EvidenceType created 1
RetractionStatus created 1
Pathway created 1
InteractionEvent created 1
CatalystActivity created 1
FragmentInsertionModification created 1
IntraChainCrosslinkedResidue created 1
GroupModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
ReactionType created 1
ReferenceTherapeutic created 1
ControlledVocabulary created 1
TranscriptionalModification created 1
DeletedControlledVocabulary created 1
FailedReaction created 1
Polymer created 1
FragmentModification created 1
ReplacedResidue created 1
ModifiedNucleotide created 1
TranslationalModification created 1
PositiveRegulation created 1
PsiMod created 1
ReferenceDNASequence created 1
NegativePrecedingEventReason created 1
OtherEntity created 1
DatabaseObject created 1
FunctionalStatus created 1
SequenceOntology created 1
ControlReference created 1
CrosslinkedResidue created 1
GeneticallyModifiedResidue created 1
Requirement created 1
_Release created 1
GO_CellularComponent created 1
EntityWithAccessionedSequence created 1
NonsenseMutation created 1
LiteratureReference created 1
RegulationReference created 1
Event created 1
ReferenceGeneProduct created 1
CellType created 1
FailedReaction structureModified +
CellLineagePath structureModified +
Reaction structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
Event structureModified +
Pathway structureModified +
ReactionlikeEvent reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
ChemicalDrug reviewed +
FailedReaction reviewed +
Cell reviewed +
Polymer reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
BlackBoxEvent reviewed +
PhysicalEntity reviewed +
OtherEntity reviewed +
Drug reviewed +
CellLineagePath reviewed +
EntitySet reviewed +
Depolymerisation reviewed +
ProteinDrug reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
Polymerisation reviewed +
RNADrug reviewed +
CandidateSet reviewed +
Event reviewed +
Pathway reviewed +
InteractionEvent reviewed +
ReactionlikeEvent edited +
Complex edited +
CellDevelopmentStep edited +
ChemicalDrug edited +
FailedReaction edited +
Cell edited +
Polymer edited +
GenomeEncodedEntity edited +
DefinedSet edited +
SimpleEntity edited +
BlackBoxEvent edited +
PhysicalEntity edited +
OtherEntity edited +
Drug edited +
CellLineagePath edited +
EntitySet edited +
ProteinDrug edited +
Depolymerisation edited +
EntityWithAccessionedSequence edited +
Reaction edited +
Polymerisation edited +
RNADrug edited +
CandidateSet edited +
Event edited +
Pathway edited +
InteractionEvent edited +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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