Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent authored +
BlackBoxEvent authored +
InteractionEvent authored +
Polymerisation authored +
CellLineagePath authored +
CandidateSet authored 1
ProteinDrug authored 1
SimpleEntity authored 1
OtherEntity authored 1
FailedReaction authored +
Event authored +
GenomeEncodedEntity authored 1
CellDevelopmentStep authored +
EntityWithAccessionedSequence authored 1
Drug authored 1
EntitySet authored 1
RNADrug authored 1
PhysicalEntity authored 1
Cell authored 1
Pathway authored +
Depolymerisation authored +
Complex authored 1
ChemicalDrug authored 1
Polymer authored 1
DefinedSet authored 1
Reaction authored +
Drug edited +
EntitySet edited +
RNADrug edited +
Cell edited +
PhysicalEntity edited +
Depolymerisation edited +
Pathway edited +
Complex edited +
Polymer edited +
ChemicalDrug edited +
DefinedSet edited +
Reaction edited +
ReactionlikeEvent edited +
Polymerisation edited +
InteractionEvent edited +
BlackBoxEvent edited +
CellLineagePath edited +
CandidateSet edited +
ProteinDrug edited +
SimpleEntity edited +
OtherEntity edited +
FailedReaction edited +
Event edited +
GenomeEncodedEntity edited +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
Pathway reviewed +
Depolymerisation reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
Cell reviewed +
Reaction reviewed +
DefinedSet reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
Complex reviewed +
EntitySet reviewed +
Drug reviewed +
GenomeEncodedEntity reviewed +
CellDevelopmentStep reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
InteractionEvent reviewed +
BlackBoxEvent reviewed +
Polymerisation reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
FailedReaction reviewed +
OtherEntity reviewed +
SimpleEntity reviewed +
CandidateSet reviewed +
ProteinDrug reviewed +
Event structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
GeneticallyModifiedResidue modified +
CatalystActivityReference modified +
Requirement modified +
FunctionalStatusType modified +
Disease modified +
Publication modified +
_Deleted modified +
TranslationalModification modified +
ReferenceSequence modified +
Affiliation modified +
FragmentModification modified +
IntraChainCrosslinkedResidue modified +
_UpdateTracker modified +
DefinedSet modified +
FunctionalStatus modified +
ModifiedNucleotide modified +
Polymer modified +
EntityFunctionalStatus modified +
ReactionlikeEvent modified +
SequenceOntology modified +
LiteratureReference modified +
FrontPage modified +
ControlReference modified +
NegativePrecedingEventReason modified +
Compartment modified +
NegativePrecedingEvent modified +
DeletedControlledVocabulary modified +
Book modified +
Summation modified +
GO_BiologicalProcess modified +
Species modified +
Figure modified +
ReactionType modified +
PathwayDiagram modified +
ReferenceMolecule modified +
URL modified +
TranscriptionalModification modified +
_Release modified +
Regulation modified +
DatabaseIdentifier modified +
ReferenceRNASequence modified +
Complex modified +
CrosslinkedResidue modified +
ChemicalDrug modified +
ReferenceDatabase modified +
StableIdentifierHistory modified +
AbstractModifiedResidue modified +
NegativeRegulation modified +
DrugActionType modified +
CandidateSet modified +
FragmentInsertionModification modified +
ProteinDrug modified +
SimpleEntity modified +
PositiveRegulation modified +
StableIdentifier modified +
InstanceEdit modified +
ReferenceDNASequence modified +
ReferenceTherapeutic modified +
Drug modified +
EntitySet modified +
EvidenceType modified +
ReferenceGroup modified +
RNADrug modified +
Depolymerisation modified +
ReplacedResidue modified +
FragmentReplacedModification modified +
ReferenceEntity modified +
GO_CellularComponent modified +
Reaction modified +
FragmentDeletionModification modified +
BlackBoxEvent modified +
ReferenceIsoform modified +
DatabaseObject modified +
GenomeEncodedEntity modified +
Anatomy modified +
ModifiedResidue modified +
ExternalOntology modified +
RegulationReference modified +
GO_MolecularFunction modified +
ReviewStatus modified +
_DeletedInstance modified +
InterChainCrosslinkedResidue modified +
GroupModifiedResidue modified +
StableIdentifierReleaseStatus modified +
PhysicalEntity modified +
Cell modified +
PsiMod modified +
Pathway modified +
CellType modified +
Polymerisation modified +
InteractionEvent modified +
CellLineagePath modified +
Person modified +
CatalystActivity modified +
FailedReaction modified +
OtherEntity modified +
Event modified +
MarkerReference modified +
ReferenceGeneProduct modified +
RetractionStatus modified +
PhysicalEntityCellType modified +
NegativeGeneExpressionRegulation modified +
NonsenseMutation modified +
CellDevelopmentStep modified +
ControlledVocabulary modified +
PositiveGeneExpressionRegulation modified +
Taxon modified +
EntityWithAccessionedSequence modified +
_Deleted replacementInstances +
EntityWithAccessionedSequence revised +
CellDevelopmentStep revised +
GenomeEncodedEntity revised +
CandidateSet revised +
ProteinDrug revised +
SimpleEntity revised +
OtherEntity revised +
FailedReaction revised +
Event revised +
ReactionlikeEvent revised +
Polymerisation revised +
InteractionEvent revised +
BlackBoxEvent revised +
CellLineagePath revised +
Complex revised +
Polymer revised +
ChemicalDrug revised +
DefinedSet revised +
Reaction revised +
Cell revised +
PhysicalEntity revised +
RNADrug revised +
Pathway revised +
Depolymerisation revised +
Drug revised +
EntitySet revised +
CatalystActivityReference created 1
GeneticallyModifiedResidue created 1
FunctionalStatusType created 1
Requirement created 1
Disease created 1
Publication created 1
TranslationalModification created 1
_Deleted created 1
ReferenceSequence created 1
Affiliation created 1
_UpdateTracker created 1
IntraChainCrosslinkedResidue created 1
FragmentModification created 1
DefinedSet created 1
ModifiedNucleotide created 1
Polymer created 1
FunctionalStatus created 1
EntityFunctionalStatus created 1
ReactionlikeEvent created 1
LiteratureReference created 1
SequenceOntology created 1
FrontPage created 1
NegativePrecedingEventReason created 1
Compartment created 1
ControlReference created 1
DeletedControlledVocabulary created 1
NegativePrecedingEvent created 1
Book created 1
GO_BiologicalProcess created 1
Summation created 1
Species created 1
ReactionType created 1
Figure created 1
PathwayDiagram created 1
URL created 1
ReferenceMolecule created 1
_Release created 1
TranscriptionalModification created 1
Regulation created 1
DatabaseIdentifier created 1
ReferenceRNASequence created 1
ChemicalDrug created 1
Complex created 1
CrosslinkedResidue created 1
AbstractModifiedResidue created 1
ReferenceDatabase created 1
StableIdentifierHistory created 1
DrugActionType created 1
NegativeRegulation created 1
SimpleEntity created 1
CandidateSet created 1
FragmentInsertionModification created 1
ProteinDrug created 1
PositiveRegulation created 1
StableIdentifier created 1
ReferenceTherapeutic created 1
InstanceEdit created 1
ReferenceDNASequence created 1
EntitySet created 1
Drug created 1
EvidenceType created 1
ReferenceGroup created 1
Depolymerisation created 1
RNADrug created 1
FragmentReplacedModification created 1
ReferenceEntity created 1
ReplacedResidue created 1
Reaction created 1
GO_CellularComponent created 1
FragmentDeletionModification created 1
BlackBoxEvent created 1
ReferenceIsoform created 1
Anatomy created 1
GenomeEncodedEntity created 1
DatabaseObject created 1
ExternalOntology created 1
ModifiedResidue created 1
GO_MolecularFunction created 1
ReviewStatus created 1
RegulationReference created 1
_DeletedInstance created 1
InterChainCrosslinkedResidue created 1
GroupModifiedResidue created 1
StableIdentifierReleaseStatus created 1
PsiMod created 1
Pathway created 1
PhysicalEntity created 1
Cell created 1
CellType created 1
Person created 1
CellLineagePath created 1
Polymerisation created 1
InteractionEvent created 1
CatalystActivity created 1
MarkerReference created 1
ReferenceGeneProduct created 1
Event created 1
FailedReaction created 1
OtherEntity created 1
NegativeGeneExpressionRegulation created 1
PhysicalEntityCellType created 1
RetractionStatus created 1
CellDevelopmentStep created 1
NonsenseMutation created 1
ControlledVocabulary created 1
PositiveGeneExpressionRegulation created 1
Taxon created 1
EntityWithAccessionedSequence created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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