Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReferenceDatabase created 1
NegativeGeneExpressionRegulation created 1
FunctionalStatus created 1
ReferenceDNASequence created 1
IntraChainCrosslinkedResidue created 1
Anatomy created 1
ReactionType created 1
Cell created 1
_Release created 1
ReferenceGeneProduct created 1
CellLineagePath created 1
Affiliation created 1
FragmentDeletionModification created 1
PhysicalEntityCellType created 1
DeletedControlledVocabulary created 1
Compartment created 1
FragmentModification created 1
StableIdentifier created 1
URL created 1
ReactionlikeEvent created 1
MarkerReference created 1
Regulation created 1
CandidateSet created 1
ReferenceRNASequence created 1
InteractionEvent created 1
Polymer created 1
Complex created 1
RNADrug created 1
EntityWithAccessionedSequence created 1
GenomeEncodedEntity created 1
_DeletedInstance created 1
EvidenceType created 1
AbstractModifiedResidue created 1
Depolymerisation created 1
GroupModifiedResidue created 1
Summation created 1
InstanceEdit created 1
ModifiedNucleotide created 1
Publication created 1
Person created 1
DefinedSet created 1
EntitySet created 1
CrosslinkedResidue created 1
CatalystActivityReference created 1
Reaction created 1
FragmentReplacedModification created 1
Event created 1
PathwayDiagram created 1
ReferenceTherapeutic created 1
SequenceOntology created 1
TranscriptionalModification created 1
LiteratureReference created 1
RegulationReference created 1
EntityFunctionalStatus created 1
Taxon created 1
ReferenceIsoform created 1
Polymerisation created 1
Disease created 1
CellType created 1
PositiveRegulation created 1
GeneticallyModifiedResidue created 1
GO_MolecularFunction created 1
_UpdateTracker created 1
BlackBoxEvent created 1
GO_CellularComponent created 1
ReferenceGroup created 1
TranslationalModification created 1
ExternalOntology created 1
RetractionStatus created 1
SimpleEntity created 1
Figure created 1
OtherEntity created 1
NonsenseMutation created 1
FunctionalStatusType created 1
ChemicalDrug created 1
ReferenceMolecule created 1
Pathway created 1
ControlledVocabulary created 1
_Deleted created 1
StableIdentifierHistory created 1
PositiveGeneExpressionRegulation created 1
ModifiedResidue created 1
PhysicalEntity created 1
FailedReaction created 1
DatabaseObject created 1
StableIdentifierReleaseStatus created 1
FrontPage created 1
ReviewStatus created 1
PsiMod created 1
ControlReference created 1
ProteinDrug created 1
Book created 1
CellDevelopmentStep created 1
ReplacedResidue created 1
Requirement created 1
NegativeRegulation created 1
NegativePrecedingEvent created 1
Drug created 1
FragmentInsertionModification created 1
ReferenceSequence created 1
NegativePrecedingEventReason created 1
GO_BiologicalProcess created 1
Species created 1
CatalystActivity created 1
InterChainCrosslinkedResidue created 1
DatabaseIdentifier created 1
ReferenceEntity created 1
DrugActionType created 1
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
RNADrug reviewed +
Complex reviewed +
FailedReaction reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
Cell reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
CellDevelopmentStep reviewed +
OtherEntity reviewed +
DefinedSet reviewed +
EntitySet reviewed +
Reaction reviewed +
Drug reviewed +
Pathway reviewed +
CandidateSet reviewed +
ReactionlikeEvent reviewed +
ChemicalDrug reviewed +
Polymer reviewed +
InteractionEvent reviewed +
Event reviewed +
FunctionalStatus modified +
NegativeGeneExpressionRegulation modified +
ReferenceDNASequence modified +
ReferenceDatabase modified +
ReferenceGeneProduct modified +
_Release modified +
Affiliation modified +
CellLineagePath modified +
Anatomy modified +
ReactionType modified +
IntraChainCrosslinkedResidue modified +
Cell modified +
Compartment modified +
FragmentModification modified +
PhysicalEntityCellType modified +
DeletedControlledVocabulary modified +
FragmentDeletionModification modified +
ReferenceRNASequence modified +
Polymer modified +
InteractionEvent modified +
URL modified +
StableIdentifier modified +
Regulation modified +
CandidateSet modified +
MarkerReference modified +
ReactionlikeEvent modified +
EvidenceType modified +
GenomeEncodedEntity modified +
_DeletedInstance modified +
AbstractModifiedResidue modified +
Complex modified +
EntityWithAccessionedSequence modified +
RNADrug modified +
ModifiedNucleotide modified +
Publication modified +
GroupModifiedResidue modified +
Depolymerisation modified +
Summation modified +
InstanceEdit modified +
CrosslinkedResidue modified +
CatalystActivityReference modified +
Reaction modified +
Person modified +
DefinedSet modified +
EntitySet modified +
Event modified +
ReferenceTherapeutic modified +
PathwayDiagram modified +
FragmentReplacedModification modified +
Taxon modified +
Polymerisation modified +
ReferenceIsoform modified +
Disease modified +
SequenceOntology modified +
RegulationReference modified +
EntityFunctionalStatus modified +
LiteratureReference modified +
TranscriptionalModification modified +
ReferenceGroup modified +
TranslationalModification modified +
PositiveRegulation modified +
GeneticallyModifiedResidue modified +
CellType modified +
BlackBoxEvent modified +
_UpdateTracker modified +
GO_CellularComponent modified +
GO_MolecularFunction modified +
FunctionalStatusType modified +
NonsenseMutation modified +
RetractionStatus modified +
SimpleEntity modified +
ExternalOntology modified +
Figure modified +
OtherEntity modified +
_Deleted modified +
ControlledVocabulary modified +
ReferenceMolecule modified +
ChemicalDrug modified +
Pathway modified +
FailedReaction modified +
PositiveGeneExpressionRegulation modified +
StableIdentifierHistory modified +
ModifiedResidue modified +
PhysicalEntity modified +
ReviewStatus modified +
FrontPage modified +
ProteinDrug modified +
ControlReference modified +
PsiMod modified +
DatabaseObject modified +
StableIdentifierReleaseStatus modified +
NegativePrecedingEvent modified +
NegativeRegulation modified +
Requirement modified +
ReferenceSequence modified +
FragmentInsertionModification modified +
Drug modified +
ReplacedResidue modified +
CellDevelopmentStep modified +
Book modified +
ReferenceEntity modified +
DatabaseIdentifier modified +
DrugActionType modified +
GO_BiologicalProcess modified +
NegativePrecedingEventReason modified +
CatalystActivity modified +
InterChainCrosslinkedResidue modified +
Species modified +
Polymerisation structureModified +
Reaction structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
Event structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
RNADrug edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
Complex edited +
FailedReaction edited +
GenomeEncodedEntity edited +
Polymerisation edited +
BlackBoxEvent edited +
Cell edited +
Depolymerisation edited +
ProteinDrug edited +
CellLineagePath edited +
OtherEntity edited +
CellDevelopmentStep edited +
SimpleEntity edited +
EntitySet edited +
DefinedSet edited +
Drug edited +
Reaction edited +
ReactionlikeEvent edited +
Pathway edited +
CandidateSet edited +
ChemicalDrug edited +
Polymer edited +
InteractionEvent edited +
Event edited +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation authored +
BlackBoxEvent authored +
Cell authored 1
CellLineagePath authored +
ProteinDrug authored 1
Complex authored 1
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
RNADrug authored 1
Polymerisation authored +
GenomeEncodedEntity authored 1
FailedReaction authored +
ChemicalDrug authored 1
Pathway authored +
CandidateSet authored 1
ReactionlikeEvent authored +
Event authored +
InteractionEvent authored +
Polymer authored 1
OtherEntity authored 1
CellDevelopmentStep authored +
SimpleEntity authored 1
DefinedSet authored 1
EntitySet authored 1
Drug authored 1
Reaction authored +
EntityWithAccessionedSequence revised +
RNADrug revised +
PhysicalEntity revised +
Complex revised +
FailedReaction revised +
GenomeEncodedEntity revised +
Polymerisation revised +
BlackBoxEvent revised +
Cell revised +
Depolymerisation revised +
ProteinDrug revised +
CellLineagePath revised +
CellDevelopmentStep revised +
SimpleEntity revised +
OtherEntity revised +
EntitySet revised +
DefinedSet revised +
Reaction revised +
Drug revised +
Pathway revised +
CandidateSet revised +
ReactionlikeEvent revised +
ChemicalDrug revised +
InteractionEvent revised +
Polymer revised +
Event revised +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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