Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellDevelopmentStep edited +
ReactionlikeEvent edited +
Cell edited +
InteractionEvent edited +
CellLineagePath edited +
PhysicalEntity edited +
Polymer edited +
SimpleEntity edited +
Polymerisation edited +
GenomeEncodedEntity edited +
Depolymerisation edited +
ProteinDrug edited +
RNADrug edited +
DefinedSet edited +
ChemicalDrug edited +
EntityWithAccessionedSequence edited +
FailedReaction edited +
Pathway edited +
CandidateSet edited +
EntitySet edited +
Reaction edited +
OtherEntity edited +
BlackBoxEvent edited +
Event edited +
Drug edited +
Complex edited +
ReferenceIsoform created 1
CellLineagePath created 1
Regulation created 1
FragmentInsertionModification created 1
_UpdateTracker created 1
AbstractModifiedResidue created 1
InteractionEvent created 1
ReferenceMolecule created 1
ReferenceTherapeutic created 1
ReactionlikeEvent created 1
DeletedControlledVocabulary created 1
Cell created 1
RNADrug created 1
ReferenceDNASequence created 1
DatabaseIdentifier created 1
StableIdentifier created 1
SimpleEntity created 1
Polymerisation created 1
EntitySet created 1
FragmentDeletionModification created 1
ReferenceGroup created 1
FailedReaction created 1
Pathway created 1
DefinedSet created 1
InterChainCrosslinkedResidue created 1
CatalystActivityReference created 1
CellType created 1
Taxon created 1
ControlledVocabulary created 1
ControlReference created 1
BlackBoxEvent created 1
IntraChainCrosslinkedResidue created 1
Compartment created 1
MarkerReference created 1
Anatomy created 1
ReferenceDatabase created 1
ReplacedResidue created 1
PsiMod created 1
TranslationalModification created 1
TranscriptionalModification created 1
NegativeRegulation created 1
GeneticallyModifiedResidue created 1
PositiveRegulation created 1
CellDevelopmentStep created 1
NegativeGeneExpressionRegulation created 1
PhysicalEntity created 1
FragmentReplacedModification created 1
Figure created 1
FrontPage created 1
Requirement created 1
StableIdentifierHistory created 1
ChemicalDrug created 1
ReferenceRNASequence created 1
ReferenceEntity created 1
Species created 1
ReferenceSequence created 1
EntityFunctionalStatus created 1
_Release created 1
RegulationReference created 1
CatalystActivity created 1
StableIdentifierReleaseStatus created 1
PositiveGeneExpressionRegulation created 1
NegativePrecedingEventReason created 1
ReviewStatus created 1
PathwayDiagram created 1
GroupModifiedResidue created 1
Depolymerisation created 1
ProteinDrug created 1
ReferenceGeneProduct created 1
GO_BiologicalProcess created 1
GenomeEncodedEntity created 1
Affiliation created 1
FragmentModification created 1
_DeletedInstance created 1
DatabaseObject created 1
Person created 1
GO_CellularComponent created 1
Disease created 1
Publication created 1
RetractionStatus created 1
Event created 1
CrosslinkedResidue created 1
Drug created 1
NegativePrecedingEvent created 1
EvidenceType created 1
ModifiedResidue created 1
NonsenseMutation created 1
_Deleted created 1
Book created 1
ReactionType created 1
Summation created 1
DrugActionType created 1
Polymer created 1
SequenceOntology created 1
LiteratureReference created 1
FunctionalStatusType created 1
GO_MolecularFunction created 1
URL created 1
CandidateSet created 1
Reaction created 1
InstanceEdit created 1
ExternalOntology created 1
EntityWithAccessionedSequence created 1
FunctionalStatus created 1
Complex created 1
ModifiedNucleotide created 1
PhysicalEntityCellType created 1
OtherEntity created 1
PsiMod modified +
ReplacedResidue modified +
ReferenceDatabase modified +
CellDevelopmentStep modified +
NegativeGeneExpressionRegulation modified +
PositiveRegulation modified +
TranslationalModification modified +
NegativeRegulation modified +
TranscriptionalModification modified +
GeneticallyModifiedResidue modified +
FragmentReplacedModification modified +
PhysicalEntity modified +
FrontPage modified +
Requirement modified +
Figure modified +
ChemicalDrug modified +
StableIdentifierHistory modified +
ReferenceRNASequence modified +
_Release modified +
RegulationReference modified +
EntityFunctionalStatus modified +
ReferenceSequence modified +
ReferenceEntity modified +
Species modified +
FragmentInsertionModification modified +
CellLineagePath modified +
Regulation modified +
ReferenceIsoform modified +
DeletedControlledVocabulary modified +
Cell modified +
ReactionlikeEvent modified +
ReferenceMolecule modified +
ReferenceTherapeutic modified +
AbstractModifiedResidue modified +
_UpdateTracker modified +
InteractionEvent modified +
DatabaseIdentifier modified +
ReferenceDNASequence modified +
RNADrug modified +
Polymerisation modified +
SimpleEntity modified +
StableIdentifier modified +
FragmentDeletionModification modified +
EntitySet modified +
CatalystActivityReference modified +
DefinedSet modified +
InterChainCrosslinkedResidue modified +
Pathway modified +
FailedReaction modified +
ReferenceGroup modified +
ControlReference modified +
CellType modified +
ControlledVocabulary modified +
Taxon modified +
Anatomy modified +
MarkerReference modified +
Compartment modified +
BlackBoxEvent modified +
IntraChainCrosslinkedResidue modified +
NegativePrecedingEvent modified +
_Deleted modified +
NonsenseMutation modified +
ModifiedResidue modified +
EvidenceType modified +
Summation modified +
DrugActionType modified +
ReactionType modified +
Book modified +
GO_MolecularFunction modified +
FunctionalStatusType modified +
SequenceOntology modified +
Polymer modified +
LiteratureReference modified +
ExternalOntology modified +
InstanceEdit modified +
CandidateSet modified +
Reaction modified +
URL modified +
FunctionalStatus modified +
EntityWithAccessionedSequence modified +
PhysicalEntityCellType modified +
ModifiedNucleotide modified +
Complex modified +
OtherEntity modified +
PositiveGeneExpressionRegulation modified +
StableIdentifierReleaseStatus modified +
CatalystActivity modified +
PathwayDiagram modified +
ReviewStatus modified +
NegativePrecedingEventReason modified +
Depolymerisation modified +
ProteinDrug modified +
ReferenceGeneProduct modified +
GroupModifiedResidue modified +
GenomeEncodedEntity modified +
GO_BiologicalProcess modified +
FragmentModification modified +
DatabaseObject modified +
_DeletedInstance modified +
Affiliation modified +
Person modified +
RetractionStatus modified +
Publication modified +
GO_CellularComponent modified +
Disease modified +
Drug modified +
CrosslinkedResidue modified +
Event modified +
_Deleted replacementInstances +
Reaction structureModified +
CellLineagePath structureModified +
Pathway structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
Event structureModified +
BlackBoxEvent structureModified +
RNADrug authored 1
Depolymerisation authored +
ProteinDrug authored 1
Polymer authored 1
SimpleEntity authored 1
GenomeEncodedEntity authored 1
Polymerisation authored +
PhysicalEntity authored 1
CellLineagePath authored +
InteractionEvent authored +
CellDevelopmentStep authored +
ReactionlikeEvent authored +
Cell authored 1
Complex authored 1
BlackBoxEvent authored +
Event authored +
Drug authored 1
OtherEntity authored 1
EntitySet authored 1
Reaction authored +
CandidateSet authored 1
EntityWithAccessionedSequence authored 1
FailedReaction authored +
Pathway authored +
DefinedSet authored 1
ChemicalDrug authored 1
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
InteractionEvent revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
Cell revised +
CellLineagePath revised +
SimpleEntity revised +
Polymer revised +
Polymerisation revised +
GenomeEncodedEntity revised +
PhysicalEntity revised +
RNADrug revised +
Depolymerisation revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
Pathway revised +
FailedReaction revised +
DefinedSet revised +
ChemicalDrug revised +
EntitySet revised +
Reaction revised +
CandidateSet revised +
BlackBoxEvent revised +
Event revised +
Drug revised +
OtherEntity revised +
Complex revised +
Drug reviewed +
BlackBoxEvent reviewed +
Event reviewed +
OtherEntity reviewed +
Complex reviewed +
FailedReaction reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
ChemicalDrug reviewed +
DefinedSet reviewed +
Reaction reviewed +
EntitySet reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
GenomeEncodedEntity reviewed +
Polymer reviewed +
SimpleEntity reviewed +
PhysicalEntity reviewed +
RNADrug reviewed +
Depolymerisation reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
Cell reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
CellLineagePath reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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