Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
RNADrug authored 1
OtherEntity authored 1
Depolymerisation authored +
DefinedSet authored 1
Polymer authored 1
EntitySet authored 1
Complex authored 1
InteractionEvent authored +
GenomeEncodedEntity authored 1
Cell authored 1
EntityWithAccessionedSequence authored 1
Event authored +
CellDevelopmentStep authored +
CellLineagePath authored +
SimpleEntity authored 1
Drug authored 1
Reaction authored +
FailedReaction authored +
ChemicalDrug authored 1
Polymerisation authored +
ProteinDrug authored 1
Pathway authored +
BlackBoxEvent authored +
CandidateSet authored 1
ReactionlikeEvent authored +
PhysicalEntity authored 1
FailedReaction revised +
Polymerisation revised +
ChemicalDrug revised +
Reaction revised +
SimpleEntity revised +
Drug revised +
CellDevelopmentStep revised +
CellLineagePath revised +
ReactionlikeEvent revised +
CandidateSet revised +
PhysicalEntity revised +
BlackBoxEvent revised +
ProteinDrug revised +
Pathway revised +
EntitySet revised +
Polymer revised +
DefinedSet revised +
RNADrug revised +
OtherEntity revised +
Depolymerisation revised +
Event revised +
EntityWithAccessionedSequence revised +
Cell revised +
InteractionEvent revised +
Complex revised +
GenomeEncodedEntity revised +
FunctionalStatus modified +
Species modified +
Polymer modified +
ReferenceGeneProduct modified +
FragmentReplacedModification modified +
ReferenceRNASequence modified +
AbstractModifiedResidue modified +
FragmentModification modified +
GO_MolecularFunction modified +
Publication modified +
FailedReaction modified +
ChemicalDrug modified +
ReviewStatus modified +
StableIdentifierReleaseStatus modified +
InstanceEdit modified +
ReferenceMolecule modified +
EntityFunctionalStatus modified +
DrugActionType modified +
Person modified +
NegativeRegulation modified +
Compartment modified +
Requirement modified +
DatabaseObject modified +
PositiveGeneExpressionRegulation modified +
FragmentInsertionModification modified +
ControlledVocabulary modified +
GeneticallyModifiedResidue modified +
CatalystActivityReference modified +
GO_CellularComponent modified +
_DeletedInstance modified +
Depolymerisation modified +
IntraChainCrosslinkedResidue modified +
ReferenceDNASequence modified +
ReferenceEntity modified +
URL modified +
FrontPage modified +
PathwayDiagram modified +
SequenceOntology modified +
Reaction modified +
TranslationalModification modified +
Regulation modified +
SimpleEntity modified +
InterChainCrosslinkedResidue modified +
CellLineagePath modified +
ReactionlikeEvent modified +
PositiveRegulation modified +
CellType modified +
CrosslinkedResidue modified +
PhysicalEntity modified +
Anatomy modified +
Pathway modified +
StableIdentifier modified +
_UpdateTracker modified +
FunctionalStatusType modified +
MarkerReference modified +
RNADrug modified +
OtherEntity modified +
Affiliation modified +
ReferenceSequence modified +
Event modified +
LiteratureReference modified +
EntityWithAccessionedSequence modified +
ReferenceDatabase modified +
DeletedControlledVocabulary modified +
Cell modified +
NonsenseMutation modified +
InteractionEvent modified +
Complex modified +
ControlReference modified +
EvidenceType modified +
NegativePrecedingEvent modified +
ExternalOntology modified +
Book modified +
Taxon modified +
NegativePrecedingEventReason modified +
ReferenceIsoform modified +
Disease modified +
ModifiedNucleotide modified +
GO_BiologicalProcess modified +
CandidateSet modified +
_Deleted modified +
BlackBoxEvent modified +
ReactionType modified +
PhysicalEntityCellType modified +
ProteinDrug modified +
EntitySet modified +
Figure modified +
ReplacedResidue modified +
DefinedSet modified +
TranscriptionalModification modified +
FragmentDeletionModification modified +
StableIdentifierHistory modified +
GenomeEncodedEntity modified +
Polymerisation modified +
DatabaseIdentifier modified +
PsiMod modified +
RetractionStatus modified +
CatalystActivity modified +
Drug modified +
CellDevelopmentStep modified +
NegativeGeneExpressionRegulation modified +
ModifiedResidue modified +
Summation modified +
GroupModifiedResidue modified +
ReferenceTherapeutic modified +
_Release modified +
ReferenceGroup modified +
RegulationReference modified +
Species created 1
FunctionalStatus created 1
Polymer created 1
FragmentReplacedModification created 1
ReferenceRNASequence created 1
AbstractModifiedResidue created 1
ReferenceGeneProduct created 1
FragmentModification created 1
ReviewStatus created 1
ChemicalDrug created 1
Publication created 1
FailedReaction created 1
GO_MolecularFunction created 1
EntityFunctionalStatus created 1
DrugActionType created 1
ReferenceMolecule created 1
InstanceEdit created 1
StableIdentifierReleaseStatus created 1
Requirement created 1
NegativeRegulation created 1
DatabaseObject created 1
Compartment created 1
PositiveGeneExpressionRegulation created 1
FragmentInsertionModification created 1
Person created 1
ControlledVocabulary created 1
GeneticallyModifiedResidue created 1
_DeletedInstance created 1
Depolymerisation created 1
GO_CellularComponent created 1
CatalystActivityReference created 1
URL created 1
FrontPage created 1
IntraChainCrosslinkedResidue created 1
ReferenceDNASequence created 1
ReferenceEntity created 1
SequenceOntology created 1
TranslationalModification created 1
Reaction created 1
Regulation created 1
PathwayDiagram created 1
InterChainCrosslinkedResidue created 1
CellLineagePath created 1
SimpleEntity created 1
Anatomy created 1
ReactionlikeEvent created 1
PositiveRegulation created 1
PhysicalEntity created 1
CellType created 1
CrosslinkedResidue created 1
_UpdateTracker created 1
Pathway created 1
StableIdentifier created 1
FunctionalStatusType created 1
RNADrug created 1
OtherEntity created 1
MarkerReference created 1
ReferenceDatabase created 1
EntityWithAccessionedSequence created 1
ReferenceSequence created 1
Affiliation created 1
Event created 1
LiteratureReference created 1
Complex created 1
InteractionEvent created 1
EvidenceType created 1
ControlReference created 1
DeletedControlledVocabulary created 1
Cell created 1
NonsenseMutation created 1
NegativePrecedingEventReason created 1
NegativePrecedingEvent created 1
ExternalOntology created 1
Taxon created 1
Book created 1
ModifiedNucleotide created 1
GO_BiologicalProcess created 1
ReferenceIsoform created 1
Disease created 1
BlackBoxEvent created 1
ReactionType created 1
PhysicalEntityCellType created 1
CandidateSet created 1
_Deleted created 1
ProteinDrug created 1
Figure created 1
EntitySet created 1
TranscriptionalModification created 1
FragmentDeletionModification created 1
DefinedSet created 1
ReplacedResidue created 1
StableIdentifierHistory created 1
GenomeEncodedEntity created 1
PsiMod created 1
RetractionStatus created 1
Polymerisation created 1
DatabaseIdentifier created 1
CellDevelopmentStep created 1
CatalystActivity created 1
Drug created 1
ReferenceTherapeutic created 1
Summation created 1
GroupModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
ModifiedResidue created 1
_Release created 1
ReferenceGroup created 1
RegulationReference created 1
_Deleted replacementInstances +
BlackBoxEvent reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
ProteinDrug reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
FailedReaction reviewed +
Polymerisation reviewed +
CellDevelopmentStep reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
Drug reviewed +
EntityWithAccessionedSequence reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
Complex reviewed +
InteractionEvent reviewed +
Cell reviewed +
Polymer reviewed +
EntitySet reviewed +
RNADrug reviewed +
Depolymerisation reviewed +
OtherEntity reviewed +
DefinedSet reviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Event structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
Pathway structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
Reaction structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
EntityWithAccessionedSequence edited +
Event edited +
GenomeEncodedEntity edited +
Complex edited +
InteractionEvent edited +
Cell edited +
Polymer edited +
EntitySet edited +
OtherEntity edited +
Depolymerisation edited +
RNADrug edited +
DefinedSet edited +
BlackBoxEvent edited +
PhysicalEntity edited +
ReactionlikeEvent edited +
CandidateSet edited +
ProteinDrug edited +
Pathway edited +
Reaction edited +
FailedReaction edited +
Polymerisation edited +
ChemicalDrug edited +
CellLineagePath edited +
CellDevelopmentStep edited +
Drug edited +
SimpleEntity edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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