Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
BlackBoxEvent structureModified +
FailedReaction structureModified +
Pathway structureModified +
Reaction structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
OtherEntity authored 1
EntitySet authored 1
Polymerisation authored +
EntityWithAccessionedSequence authored 1
Complex authored 1
Reaction authored +
GenomeEncodedEntity authored 1
Depolymerisation authored +
Drug authored 1
DefinedSet authored 1
ProteinDrug authored 1
Event authored +
PhysicalEntity authored 1
CellDevelopmentStep authored +
RNADrug authored 1
SimpleEntity authored 1
ReactionlikeEvent authored +
CandidateSet authored 1
CellLineagePath authored +
ChemicalDrug authored 1
InteractionEvent authored +
Polymer authored 1
BlackBoxEvent authored +
FailedReaction authored +
Cell authored 1
Pathway authored +
OtherEntity created 1
NegativePrecedingEventReason created 1
PhysicalEntityCellType created 1
GroupModifiedResidue created 1
_DeletedInstance created 1
ReferenceDNASequence created 1
EntityWithAccessionedSequence created 1
GO_CellularComponent created 1
Species created 1
ReferenceTherapeutic created 1
PositiveGeneExpressionRegulation created 1
Disease created 1
ReactionType created 1
Event created 1
InteractionEvent created 1
ReferenceEntity created 1
PathwayDiagram created 1
ControlledVocabulary created 1
StableIdentifierHistory created 1
FunctionalStatusType created 1
ReplacedResidue created 1
SequenceOntology created 1
IntraChainCrosslinkedResidue created 1
URL created 1
Book created 1
DeletedControlledVocabulary created 1
NegativeGeneExpressionRegulation created 1
RetractionStatus created 1
ReferenceRNASequence created 1
DefinedSet created 1
Depolymerisation created 1
ModifiedNucleotide created 1
PsiMod created 1
ControlReference created 1
Anatomy created 1
FragmentDeletionModification created 1
ProteinDrug created 1
FrontPage created 1
ReferenceGroup created 1
PhysicalEntity created 1
PositiveRegulation created 1
InstanceEdit created 1
SimpleEntity created 1
NonsenseMutation created 1
ReferenceIsoform created 1
_Release created 1
Pathway created 1
Regulation created 1
TranscriptionalModification created 1
TranslationalModification created 1
CrosslinkedResidue created 1
ReferenceGeneProduct created 1
ReferenceSequence created 1
LiteratureReference created 1
CatalystActivityReference created 1
RegulationReference created 1
DatabaseIdentifier created 1
GO_MolecularFunction created 1
ReferenceMolecule created 1
Affiliation created 1
GenomeEncodedEntity created 1
EntityFunctionalStatus created 1
Requirement created 1
ModifiedResidue created 1
RNADrug created 1
StableIdentifier created 1
FragmentInsertionModification created 1
StableIdentifierReleaseStatus created 1
ChemicalDrug created 1
InterChainCrosslinkedResidue created 1
CellType created 1
Person created 1
FailedReaction created 1
DrugActionType created 1
ReviewStatus created 1
Summation created 1
EntitySet created 1
DatabaseObject created 1
FragmentModification created 1
NegativePrecedingEvent created 1
Complex created 1
NegativeRegulation created 1
EvidenceType created 1
Polymerisation created 1
_Deleted created 1
Drug created 1
ExternalOntology created 1
FragmentReplacedModification created 1
Reaction created 1
Figure created 1
FunctionalStatus created 1
AbstractModifiedResidue created 1
CellDevelopmentStep created 1
CatalystActivity created 1
Taxon created 1
ReactionlikeEvent created 1
CandidateSet created 1
GO_BiologicalProcess created 1
Polymer created 1
_UpdateTracker created 1
CellLineagePath created 1
ReferenceDatabase created 1
MarkerReference created 1
Cell created 1
GeneticallyModifiedResidue created 1
Publication created 1
BlackBoxEvent created 1
Compartment created 1
BlackBoxEvent revised +
Cell revised +
FailedReaction revised +
Pathway revised +
CellLineagePath revised +
ChemicalDrug revised +
InteractionEvent revised +
Polymer revised +
SimpleEntity revised +
CandidateSet revised +
ReactionlikeEvent revised +
Event revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
RNADrug revised +
ProteinDrug revised +
Reaction revised +
Depolymerisation revised +
GenomeEncodedEntity revised +
Drug revised +
DefinedSet revised +
Polymerisation revised +
EntityWithAccessionedSequence revised +
Complex revised +
OtherEntity revised +
EntitySet revised +
ReactionlikeEvent edited +
CandidateSet edited +
SimpleEntity edited +
CellDevelopmentStep edited +
PhysicalEntity edited +
RNADrug edited +
Event edited +
FailedReaction edited +
Cell edited +
Pathway edited +
BlackBoxEvent edited +
ChemicalDrug edited +
InteractionEvent edited +
Polymer edited +
CellLineagePath edited +
EntityWithAccessionedSequence edited +
Complex edited +
Polymerisation edited +
OtherEntity edited +
EntitySet edited +
ProteinDrug edited +
Drug edited +
DefinedSet edited +
Reaction edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
CatalystActivity modified +
CellDevelopmentStep modified +
GO_BiologicalProcess modified +
Taxon modified +
ReactionlikeEvent modified +
CandidateSet modified +
ReferenceDatabase modified +
CellLineagePath modified +
_UpdateTracker modified +
MarkerReference modified +
Polymer modified +
Publication modified +
Compartment modified +
BlackBoxEvent modified +
Cell modified +
GeneticallyModifiedResidue modified +
FragmentModification modified +
NegativePrecedingEvent modified +
EntitySet modified +
DatabaseObject modified +
EvidenceType modified +
Polymerisation modified +
NegativeRegulation modified +
Complex modified +
ExternalOntology modified +
Reaction modified +
FragmentReplacedModification modified +
Drug modified +
_Deleted modified +
FunctionalStatus modified +
AbstractModifiedResidue modified +
Figure modified +
RNADrug modified +
ModifiedResidue modified +
FragmentInsertionModification modified +
StableIdentifier modified +
StableIdentifierReleaseStatus modified +
ChemicalDrug modified +
ReviewStatus modified +
Summation modified +
CellType modified +
InterChainCrosslinkedResidue modified +
DrugActionType modified +
FailedReaction modified +
Person modified +
ReferenceGeneProduct modified +
ReferenceSequence modified +
TranscriptionalModification modified +
TranslationalModification modified +
CrosslinkedResidue modified +
RegulationReference modified +
DatabaseIdentifier modified +
GO_MolecularFunction modified +
ReferenceMolecule modified +
LiteratureReference modified +
CatalystActivityReference modified +
GenomeEncodedEntity modified +
EntityFunctionalStatus modified +
Affiliation modified +
Requirement modified +
PositiveRegulation modified +
InstanceEdit modified +
FrontPage modified +
PhysicalEntity modified +
ReferenceGroup modified +
SimpleEntity modified +
NonsenseMutation modified +
ReferenceIsoform modified +
_Release modified +
Pathway modified +
Regulation modified +
DeletedControlledVocabulary modified +
Book modified +
RetractionStatus modified +
ReferenceRNASequence modified +
NegativeGeneExpressionRegulation modified +
ModifiedNucleotide modified +
Depolymerisation modified +
DefinedSet modified +
Anatomy modified +
ProteinDrug modified +
FragmentDeletionModification modified +
PsiMod modified +
ControlReference modified +
Event modified +
Disease modified +
ReactionType modified +
ControlledVocabulary modified +
ReferenceEntity modified +
InteractionEvent modified +
PathwayDiagram modified +
ReplacedResidue modified +
URL modified +
IntraChainCrosslinkedResidue modified +
SequenceOntology modified +
StableIdentifierHistory modified +
FunctionalStatusType modified +
PhysicalEntityCellType modified +
NegativePrecedingEventReason modified +
GroupModifiedResidue modified +
OtherEntity modified +
GO_CellularComponent modified +
_DeletedInstance modified +
EntityWithAccessionedSequence modified +
ReferenceDNASequence modified +
ReferenceTherapeutic modified +
PositiveGeneExpressionRegulation modified +
Species modified +
_Deleted replacementInstances +
Drug reviewed +
DefinedSet reviewed +
Reaction reviewed +
GenomeEncodedEntity reviewed +
Depolymerisation reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
EntitySet reviewed +
EntityWithAccessionedSequence reviewed +
Complex reviewed +
Polymerisation reviewed +
ChemicalDrug reviewed +
InteractionEvent reviewed +
Polymer reviewed +
CellLineagePath reviewed +
Cell reviewed +
FailedReaction reviewed +
Pathway reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
PhysicalEntity reviewed +
RNADrug reviewed +
Event reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
SimpleEntity reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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