Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
Depolymerisation revised +
Complex revised +
Polymerisation revised +
ChemicalDrug revised +
EntityWithAccessionedSequence revised +
CellDevelopmentStep revised +
OtherEntity revised +
Pathway revised +
CandidateSet revised +
EntitySet revised +
Cell revised +
GenomeEncodedEntity revised +
RNADrug revised +
BlackBoxEvent revised +
SimpleEntity revised +
InteractionEvent revised +
ProteinDrug revised +
Event revised +
Reaction revised +
ReactionlikeEvent revised +
CellLineagePath revised +
DefinedSet revised +
Drug revised +
PhysicalEntity revised +
Polymer revised +
FailedReaction revised +
Complex created 1
_DeletedInstance created 1
EntityWithAccessionedSequence created 1
DrugActionType created 1
StableIdentifier created 1
ReviewStatus created 1
GenomeEncodedEntity created 1
PsiMod created 1
GO_MolecularFunction created 1
_UpdateTracker created 1
ReferenceDatabase created 1
StableIdentifierReleaseStatus created 1
Event created 1
ReactionlikeEvent created 1
Compartment created 1
CellLineagePath created 1
ReferenceGeneProduct created 1
PositiveGeneExpressionRegulation created 1
FragmentReplacedModification created 1
PhysicalEntityCellType created 1
Affiliation created 1
NegativePrecedingEventReason created 1
Depolymerisation created 1
ModifiedNucleotide created 1
ControlReference created 1
CellDevelopmentStep created 1
Pathway created 1
DatabaseIdentifier created 1
Anatomy created 1
NonsenseMutation created 1
DeletedControlledVocabulary created 1
FrontPage created 1
BlackBoxEvent created 1
Book created 1
EntityFunctionalStatus created 1
Regulation created 1
ProteinDrug created 1
ReferenceGroup created 1
Disease created 1
Taxon created 1
Reaction created 1
TranslationalModification created 1
SequenceOntology created 1
ModifiedResidue created 1
_Deleted created 1
PositiveRegulation created 1
Drug created 1
CrosslinkedResidue created 1
ReferenceSequence created 1
ReferenceIsoform created 1
PhysicalEntity created 1
InterChainCrosslinkedResidue created 1
FailedReaction created 1
Polymerisation created 1
GO_CellularComponent created 1
NegativeGeneExpressionRegulation created 1
ChemicalDrug created 1
GeneticallyModifiedResidue created 1
CatalystActivityReference created 1
OtherEntity created 1
CandidateSet created 1
RetractionStatus created 1
PathwayDiagram created 1
FunctionalStatusType created 1
FragmentModification created 1
FragmentInsertionModification created 1
SimpleEntity created 1
IntraChainCrosslinkedResidue created 1
ReferenceTherapeutic created 1
AbstractModifiedResidue created 1
MarkerReference created 1
ReferenceMolecule created 1
FragmentDeletionModification created 1
CatalystActivity created 1
_Release created 1
TranscriptionalModification created 1
Requirement created 1
DefinedSet created 1
Species created 1
NegativePrecedingEvent created 1
ReferenceRNASequence created 1
URL created 1
Publication created 1
StableIdentifierHistory created 1
GO_BiologicalProcess created 1
InstanceEdit created 1
NegativeRegulation created 1
CellType created 1
GroupModifiedResidue created 1
Summation created 1
Figure created 1
ExternalOntology created 1
Cell created 1
ReplacedResidue created 1
EntitySet created 1
RNADrug created 1
ReferenceEntity created 1
EvidenceType created 1
ReactionType created 1
InteractionEvent created 1
ControlledVocabulary created 1
RegulationReference created 1
DatabaseObject created 1
ReferenceDNASequence created 1
LiteratureReference created 1
FunctionalStatus created 1
Person created 1
Polymer created 1
ReactionlikeEvent edited +
Event edited +
Reaction edited +
ProteinDrug edited +
FailedReaction edited +
PhysicalEntity edited +
Polymer edited +
Drug edited +
DefinedSet edited +
CellLineagePath edited +
OtherEntity edited +
Pathway edited +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
ChemicalDrug edited +
Depolymerisation edited +
Complex edited +
Polymerisation edited +
InteractionEvent edited +
BlackBoxEvent edited +
SimpleEntity edited +
RNADrug edited +
EntitySet edited +
GenomeEncodedEntity edited +
Cell edited +
CandidateSet edited +
PsiMod modified +
GenomeEncodedEntity modified +
GO_MolecularFunction modified +
_UpdateTracker modified +
EntityWithAccessionedSequence modified +
_DeletedInstance modified +
Complex modified +
ReviewStatus modified +
DrugActionType modified +
StableIdentifier modified +
ReferenceGeneProduct modified +
CellLineagePath modified +
NegativePrecedingEventReason modified +
Affiliation modified +
PhysicalEntityCellType modified +
PositiveGeneExpressionRegulation modified +
FragmentReplacedModification modified +
StableIdentifierReleaseStatus modified +
ReferenceDatabase modified +
ReactionlikeEvent modified +
Compartment modified +
Event modified +
NonsenseMutation modified +
Anatomy modified +
BlackBoxEvent modified +
FrontPage modified +
DeletedControlledVocabulary modified +
Depolymerisation modified +
ModifiedNucleotide modified +
DatabaseIdentifier modified +
Pathway modified +
CellDevelopmentStep modified +
ControlReference modified +
CrosslinkedResidue modified +
Drug modified +
PositiveRegulation modified +
_Deleted modified +
ModifiedResidue modified +
TranslationalModification modified +
SequenceOntology modified +
FailedReaction modified +
ReferenceIsoform modified +
PhysicalEntity modified +
InterChainCrosslinkedResidue modified +
ReferenceSequence modified +
Disease modified +
Taxon modified +
ProteinDrug modified +
ReferenceGroup modified +
Book modified +
EntityFunctionalStatus modified +
Regulation modified +
Reaction modified +
FunctionalStatusType modified +
PathwayDiagram modified +
RetractionStatus modified +
CandidateSet modified +
IntraChainCrosslinkedResidue modified +
SimpleEntity modified +
FragmentInsertionModification modified +
FragmentModification modified +
ChemicalDrug modified +
NegativeGeneExpressionRegulation modified +
GO_CellularComponent modified +
Polymerisation modified +
OtherEntity modified +
CatalystActivityReference modified +
GeneticallyModifiedResidue modified +
DefinedSet modified +
Requirement modified +
TranscriptionalModification modified +
_Release modified +
NegativePrecedingEvent modified +
Species modified +
FragmentDeletionModification modified +
ReferenceMolecule modified +
MarkerReference modified +
AbstractModifiedResidue modified +
ReferenceTherapeutic modified +
CatalystActivity modified +
ReplacedResidue modified +
EntitySet modified +
Cell modified +
ExternalOntology modified +
Figure modified +
Summation modified +
GroupModifiedResidue modified +
InteractionEvent modified +
ReactionType modified +
EvidenceType modified +
ReferenceEntity modified +
RNADrug modified +
StableIdentifierHistory modified +
Publication modified +
URL modified +
ReferenceRNASequence modified +
NegativeRegulation modified +
CellType modified +
InstanceEdit modified +
GO_BiologicalProcess modified +
FunctionalStatus modified +
LiteratureReference modified +
ReferenceDNASequence modified +
Person modified +
Polymer modified +
RegulationReference modified +
ControlledVocabulary modified +
DatabaseObject modified +
CellDevelopmentStep authored +
Pathway authored +
OtherEntity authored 1
Polymerisation authored +
Complex authored 1
Depolymerisation authored +
ChemicalDrug authored 1
EntityWithAccessionedSequence authored 1
RNADrug authored 1
BlackBoxEvent authored +
SimpleEntity authored 1
InteractionEvent authored +
CandidateSet authored 1
Cell authored 1
GenomeEncodedEntity authored 1
EntitySet authored 1
Reaction authored +
Event authored +
ReactionlikeEvent authored +
ProteinDrug authored 1
Polymer authored 1
PhysicalEntity authored 1
FailedReaction authored +
CellLineagePath authored +
DefinedSet authored 1
Drug authored 1
Pathway structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
Event structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
FailedReaction reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
Drug reviewed +
DefinedSet reviewed +
CellLineagePath reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
Reaction reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
RNADrug reviewed +
BlackBoxEvent reviewed +
SimpleEntity reviewed +
EntitySet reviewed +
GenomeEncodedEntity reviewed +
Cell reviewed +
CandidateSet reviewed +
OtherEntity reviewed +
Pathway reviewed +
CellDevelopmentStep reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
Depolymerisation reviewed +
Complex reviewed +
Polymerisation reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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