Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
PhysicalEntity revised +
Polymer revised +
InteractionEvent revised +
GenomeEncodedEntity revised +
BlackBoxEvent revised +
SimpleEntity revised +
Drug revised +
Pathway revised +
CellDevelopmentStep revised +
RNADrug revised +
CandidateSet revised +
DefinedSet revised +
Depolymerisation revised +
OtherEntity revised +
ProteinDrug revised +
Cell revised +
EntitySet revised +
CellLineagePath revised +
Event revised +
EntityWithAccessionedSequence revised +
Polymerisation revised +
FailedReaction revised +
ReactionlikeEvent revised +
Complex revised +
ChemicalDrug revised +
Reaction revised +
_Deleted replacementInstances +
Polymerisation edited +
FailedReaction edited +
EntitySet edited +
EntityWithAccessionedSequence edited +
Event edited +
CellLineagePath edited +
ChemicalDrug edited +
Reaction edited +
Complex edited +
ReactionlikeEvent edited +
CandidateSet edited +
CellDevelopmentStep edited +
Pathway edited +
RNADrug edited +
Polymer edited +
InteractionEvent edited +
GenomeEncodedEntity edited +
PhysicalEntity edited +
SimpleEntity edited +
BlackBoxEvent edited +
Drug edited +
OtherEntity edited +
ProteinDrug edited +
Cell edited +
DefinedSet edited +
Depolymerisation edited +
ReferenceSequence modified +
LiteratureReference modified +
NegativePrecedingEventReason modified +
GO_MolecularFunction modified +
FragmentModification modified +
ReferenceTherapeutic modified +
TranslationalModification modified +
Drug modified +
RegulationReference modified +
Affiliation modified +
Person modified +
ReplacedResidue modified +
Species modified +
RetractionStatus modified +
DefinedSet modified +
Book modified +
PositiveRegulation modified +
FailedReaction modified +
ControlledVocabulary modified +
DeletedControlledVocabulary modified +
CatalystActivityReference modified +
CellLineagePath modified +
Regulation modified +
FragmentDeletionModification modified +
Disease modified +
GO_BiologicalProcess modified +
DatabaseObject modified +
ReactionlikeEvent modified +
Compartment modified +
PsiMod modified +
SequenceOntology modified +
URL modified +
StableIdentifierReleaseStatus modified +
Pathway modified +
EvidenceType modified +
ControlReference modified +
BlackBoxEvent modified +
FunctionalStatus modified +
Anatomy modified +
PhysicalEntityCellType modified +
CatalystActivity modified +
Depolymerisation modified +
_Release modified +
Taxon modified +
Polymerisation modified +
CellType modified +
EntityWithAccessionedSequence modified +
AbstractModifiedResidue modified +
ExternalOntology modified +
InterChainCrosslinkedResidue modified +
FragmentInsertionModification modified +
NegativeGeneExpressionRegulation modified +
ChemicalDrug modified +
TranscriptionalModification modified +
FunctionalStatusType modified +
EntityFunctionalStatus modified +
Summation modified +
CandidateSet modified +
_UpdateTracker modified +
CellDevelopmentStep modified +
Figure modified +
RNADrug modified +
SimpleEntity modified +
GeneticallyModifiedResidue modified +
Polymer modified +
GenomeEncodedEntity modified +
PhysicalEntity modified +
_DeletedInstance modified +
DatabaseIdentifier modified +
Requirement modified +
Cell modified +
NegativeRegulation modified +
FragmentReplacedModification modified +
ReferenceDatabase modified +
PositiveGeneExpressionRegulation modified +
DrugActionType modified +
NonsenseMutation modified +
IntraChainCrosslinkedResidue modified +
ReactionType modified +
ReferenceRNASequence modified +
Event modified +
ReferenceIsoform modified +
ReferenceGeneProduct modified +
Publication modified +
EntitySet modified +
NegativePrecedingEvent modified +
Reaction modified +
InstanceEdit modified +
Complex modified +
ReferenceGroup modified +
ReviewStatus modified +
ReferenceDNASequence modified +
ModifiedNucleotide modified +
StableIdentifierHistory modified +
GO_CellularComponent modified +
StableIdentifier modified +
CrosslinkedResidue modified +
ReferenceMolecule modified +
ModifiedResidue modified +
InteractionEvent modified +
ReferenceEntity modified +
PathwayDiagram modified +
MarkerReference modified +
ProteinDrug modified +
_Deleted modified +
OtherEntity modified +
GroupModifiedResidue modified +
FrontPage modified +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Complex authored 1
ReactionlikeEvent authored +
ChemicalDrug authored 1
Reaction authored +
EntitySet authored 1
EntityWithAccessionedSequence authored 1
Event authored +
CellLineagePath authored +
Polymerisation authored +
FailedReaction authored +
DefinedSet authored 1
Depolymerisation authored +
OtherEntity authored 1
ProteinDrug authored 1
Cell authored 1
Polymer authored 1
InteractionEvent authored +
GenomeEncodedEntity authored 1
PhysicalEntity authored 1
Drug authored 1
SimpleEntity authored 1
BlackBoxEvent authored +
CandidateSet authored 1
RNADrug authored 1
CellDevelopmentStep authored +
Pathway authored +
Depolymerisation reviewed +
DefinedSet reviewed +
ProteinDrug reviewed +
Cell reviewed +
OtherEntity reviewed +
Drug reviewed +
SimpleEntity reviewed +
BlackBoxEvent reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
InteractionEvent reviewed +
GenomeEncodedEntity reviewed +
Pathway reviewed +
RNADrug reviewed +
CellDevelopmentStep reviewed +
CandidateSet reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
CellLineagePath reviewed +
EntityWithAccessionedSequence reviewed +
Event reviewed +
EntitySet reviewed +
FailedReaction reviewed +
Polymerisation reviewed +
FragmentReplacedModification created 1
Requirement created 1
DatabaseIdentifier created 1
Cell created 1
NegativeRegulation created 1
IntraChainCrosslinkedResidue created 1
NonsenseMutation created 1
ReferenceDatabase created 1
PositiveGeneExpressionRegulation created 1
DrugActionType created 1
CandidateSet created 1
CellDevelopmentStep created 1
Figure created 1
_UpdateTracker created 1
RNADrug created 1
GenomeEncodedEntity created 1
Polymer created 1
PhysicalEntity created 1
_DeletedInstance created 1
GeneticallyModifiedResidue created 1
SimpleEntity created 1
TranscriptionalModification created 1
ChemicalDrug created 1
FunctionalStatusType created 1
InterChainCrosslinkedResidue created 1
FragmentInsertionModification created 1
NegativeGeneExpressionRegulation created 1
Summation created 1
EntityFunctionalStatus created 1
CellType created 1
Polymerisation created 1
AbstractModifiedResidue created 1
EntityWithAccessionedSequence created 1
ExternalOntology created 1
_Deleted created 1
OtherEntity created 1
MarkerReference created 1
ProteinDrug created 1
FrontPage created 1
GroupModifiedResidue created 1
StableIdentifier created 1
CrosslinkedResidue created 1
InteractionEvent created 1
PathwayDiagram created 1
ReferenceEntity created 1
ReferenceMolecule created 1
ModifiedResidue created 1
InstanceEdit created 1
Reaction created 1
ModifiedNucleotide created 1
StableIdentifierHistory created 1
GO_CellularComponent created 1
Complex created 1
ReferenceGroup created 1
ReferenceDNASequence created 1
ReviewStatus created 1
ReferenceRNASequence created 1
ReactionType created 1
Publication created 1
EntitySet created 1
NegativePrecedingEvent created 1
Event created 1
ReferenceIsoform created 1
ReferenceGeneProduct created 1
Person created 1
Affiliation created 1
RetractionStatus created 1
Species created 1
DefinedSet created 1
Book created 1
ReplacedResidue created 1
TranslationalModification created 1
Drug created 1
RegulationReference created 1
ReferenceTherapeutic created 1
GO_MolecularFunction created 1
FragmentModification created 1
ReferenceSequence created 1
NegativePrecedingEventReason created 1
LiteratureReference created 1
CatalystActivity created 1
PhysicalEntityCellType created 1
_Release created 1
Taxon created 1
Depolymerisation created 1
StableIdentifierReleaseStatus created 1
ControlReference created 1
EvidenceType created 1
Pathway created 1
Anatomy created 1
BlackBoxEvent created 1
FunctionalStatus created 1
DatabaseObject created 1
GO_BiologicalProcess created 1
SequenceOntology created 1
PsiMod created 1
URL created 1
ReactionlikeEvent created 1
Compartment created 1
DeletedControlledVocabulary created 1
PositiveRegulation created 1
FailedReaction created 1
ControlledVocabulary created 1
FragmentDeletionModification created 1
Regulation created 1
Disease created 1
CatalystActivityReference created 1
CellLineagePath created 1
InteractionEvent structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Event structureModified +
Polymerisation structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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