Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ProteinDrug revised +
CellLineagePath revised +
SimpleEntity revised +
RNADrug revised +
DefinedSet revised +
PhysicalEntity revised +
Polymer revised +
Depolymerisation revised +
FailedReaction revised +
CellDevelopmentStep revised +
ChemicalDrug revised +
InteractionEvent revised +
Event revised +
Pathway revised +
GenomeEncodedEntity revised +
Reaction revised +
EntitySet revised +
EntityWithAccessionedSequence revised +
Cell revised +
OtherEntity revised +
Complex revised +
BlackBoxEvent revised +
ReactionlikeEvent revised +
CandidateSet revised +
Polymerisation revised +
Drug revised +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Pathway structureModified +
Reaction structureModified +
InteractionEvent structureModified +
Event structureModified +
CellLineagePath structureModified +
Regulation created 1
NegativeGeneExpressionRegulation created 1
GO_MolecularFunction created 1
ChemicalDrug created 1
ReferenceRNASequence created 1
Reaction created 1
ReactionType created 1
_Release created 1
ReferenceIsoform created 1
StableIdentifierHistory created 1
InterChainCrosslinkedResidue created 1
Affiliation created 1
OtherEntity created 1
Cell created 1
CandidateSet created 1
Polymerisation created 1
ReviewStatus created 1
RetractionStatus created 1
DeletedControlledVocabulary created 1
MarkerReference created 1
CellLineagePath created 1
SimpleEntity created 1
NonsenseMutation created 1
PhysicalEntityCellType created 1
_UpdateTracker created 1
RNADrug created 1
Polymer created 1
Publication created 1
LiteratureReference created 1
CatalystActivityReference created 1
DrugActionType created 1
StableIdentifierReleaseStatus created 1
PositiveRegulation created 1
ReferenceSequence created 1
NegativePrecedingEvent created 1
GeneticallyModifiedResidue created 1
EntitySet created 1
ReferenceGeneProduct created 1
EntityWithAccessionedSequence created 1
ReactionlikeEvent created 1
FrontPage created 1
Complex created 1
NegativeRegulation created 1
NegativePrecedingEventReason created 1
Person created 1
DatabaseIdentifier created 1
DefinedSet created 1
ReferenceMolecule created 1
Depolymerisation created 1
FragmentInsertionModification created 1
ReferenceGroup created 1
FailedReaction created 1
PsiMod created 1
FragmentModification created 1
ReferenceEntity created 1
CellDevelopmentStep created 1
EntityFunctionalStatus created 1
Event created 1
CatalystActivity created 1
ReferenceDatabase created 1
CellType created 1
GenomeEncodedEntity created 1
ExternalOntology created 1
ModifiedNucleotide created 1
ReferenceTherapeutic created 1
Figure created 1
Pathway created 1
GO_BiologicalProcess created 1
EvidenceType created 1
BlackBoxEvent created 1
Anatomy created 1
RegulationReference created 1
DatabaseObject created 1
_DeletedInstance created 1
SequenceOntology created 1
IntraChainCrosslinkedResidue created 1
Summation created 1
FragmentReplacedModification created 1
Requirement created 1
FunctionalStatus created 1
InteractionEvent created 1
StableIdentifier created 1
_Deleted created 1
GroupModifiedResidue created 1
ControlledVocabulary created 1
ReferenceDNASequence created 1
Species created 1
CrosslinkedResidue created 1
GO_CellularComponent created 1
Drug created 1
TranscriptionalModification created 1
ProteinDrug created 1
AbstractModifiedResidue created 1
ModifiedResidue created 1
FunctionalStatusType created 1
ReplacedResidue created 1
PositiveGeneExpressionRegulation created 1
Compartment created 1
TranslationalModification created 1
ControlReference created 1
Taxon created 1
FragmentDeletionModification created 1
PathwayDiagram created 1
PhysicalEntity created 1
InstanceEdit created 1
Book created 1
Disease created 1
URL created 1
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
ChemicalDrug authored 1
InteractionEvent authored +
Event authored +
GenomeEncodedEntity authored 1
EntitySet authored 1
Reaction authored +
Pathway authored +
EntityWithAccessionedSequence authored 1
OtherEntity authored 1
Cell authored 1
Polymerisation authored +
ReactionlikeEvent authored +
CandidateSet authored 1
Drug authored 1
Complex authored 1
BlackBoxEvent authored +
CellLineagePath authored +
SimpleEntity authored 1
ProteinDrug authored 1
DefinedSet authored 1
RNADrug authored 1
Polymer authored 1
Depolymerisation authored +
FailedReaction authored +
PhysicalEntity authored 1
CellDevelopmentStep authored +
ReactionlikeEvent edited +
CandidateSet edited +
Polymerisation edited +
Drug edited +
Complex edited +
BlackBoxEvent edited +
EntityWithAccessionedSequence edited +
Cell edited +
OtherEntity edited +
GenomeEncodedEntity edited +
Reaction edited +
EntitySet edited +
Pathway edited +
ChemicalDrug edited +
Event edited +
InteractionEvent edited +
CellDevelopmentStep edited +
Polymer edited +
Depolymerisation edited +
FailedReaction edited +
PhysicalEntity edited +
RNADrug edited +
DefinedSet edited +
SimpleEntity edited +
CellLineagePath edited +
ProteinDrug edited +
_Deleted replacementInstances +
ChemicalDrug modified +
GO_MolecularFunction modified +
Regulation modified +
NegativeGeneExpressionRegulation modified +
InterChainCrosslinkedResidue modified +
ReferenceIsoform modified +
_Release modified +
StableIdentifierHistory modified +
ReactionType modified +
Reaction modified +
ReferenceRNASequence modified +
Cell modified +
OtherEntity modified +
Affiliation modified +
RetractionStatus modified +
ReviewStatus modified +
CandidateSet modified +
Polymerisation modified +
PhysicalEntityCellType modified +
NonsenseMutation modified +
SimpleEntity modified +
CellLineagePath modified +
DeletedControlledVocabulary modified +
MarkerReference modified +
RNADrug modified +
_UpdateTracker modified +
LiteratureReference modified +
Publication modified +
Polymer modified +
CatalystActivityReference modified +
NegativePrecedingEvent modified +
PositiveRegulation modified +
ReferenceSequence modified +
StableIdentifierReleaseStatus modified +
DrugActionType modified +
ReferenceGeneProduct modified +
EntitySet modified +
GeneticallyModifiedResidue modified +
EntityWithAccessionedSequence modified +
NegativeRegulation modified +
Complex modified +
FrontPage modified +
ReactionlikeEvent modified +
Person modified +
NegativePrecedingEventReason modified +
DefinedSet modified +
ReferenceMolecule modified +
DatabaseIdentifier modified +
PsiMod modified +
ReferenceGroup modified +
FailedReaction modified +
Depolymerisation modified +
FragmentInsertionModification modified +
FragmentModification modified +
CellDevelopmentStep modified +
ReferenceEntity modified +
Event modified +
CatalystActivity modified +
EntityFunctionalStatus modified +
Pathway modified +
Figure modified +
ReferenceTherapeutic modified +
ModifiedNucleotide modified +
ExternalOntology modified +
CellType modified +
GenomeEncodedEntity modified +
ReferenceDatabase modified +
GO_BiologicalProcess modified +
BlackBoxEvent modified +
Anatomy modified +
EvidenceType modified +
SequenceOntology modified +
DatabaseObject modified +
RegulationReference modified +
_DeletedInstance modified +
Summation modified +
IntraChainCrosslinkedResidue modified +
FragmentReplacedModification modified +
Requirement modified +
FunctionalStatus modified +
InteractionEvent modified +
StableIdentifier modified +
ControlledVocabulary modified +
GroupModifiedResidue modified +
_Deleted modified +
Species modified +
ReferenceDNASequence modified +
TranscriptionalModification modified +
Drug modified +
GO_CellularComponent modified +
CrosslinkedResidue modified +
AbstractModifiedResidue modified +
ProteinDrug modified +
Compartment modified +
TranslationalModification modified +
PositiveGeneExpressionRegulation modified +
ModifiedResidue modified +
ReplacedResidue modified +
FunctionalStatusType modified +
PhysicalEntity modified +
InstanceEdit modified +
PathwayDiagram modified +
Taxon modified +
FragmentDeletionModification modified +
ControlReference modified +
URL modified +
Book modified +
Disease modified +
ChemicalDrug reviewed +
InteractionEvent reviewed +
Event reviewed +
Pathway reviewed +
GenomeEncodedEntity reviewed +
Reaction reviewed +
EntitySet reviewed +
EntityWithAccessionedSequence reviewed +
OtherEntity reviewed +
Cell reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
Polymerisation reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
Drug reviewed +
ProteinDrug reviewed +
SimpleEntity reviewed +
CellLineagePath reviewed +
DefinedSet reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
CellDevelopmentStep reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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