Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
EvidenceType created 1
_UpdateTracker created 1
ReferenceMolecule created 1
ModifiedNucleotide created 1
IntraChainCrosslinkedResidue created 1
InteractionEvent created 1
Person created 1
PathwayDiagram created 1
_Deleted created 1
GO_CellularComponent created 1
NegativeGeneExpressionRegulation created 1
SimpleEntity created 1
ReferenceDNASequence created 1
CellLineagePath created 1
Reaction created 1
ControlledVocabulary created 1
ReviewStatus created 1
URL created 1
NegativeRegulation created 1
FunctionalStatus created 1
EntityWithAccessionedSequence created 1
FragmentInsertionModification created 1
Publication created 1
NonsenseMutation created 1
CandidateSet created 1
FragmentDeletionModification created 1
ReplacedResidue created 1
SequenceOntology created 1
Polymerisation created 1
Complex created 1
DrugActionType created 1
NegativePrecedingEventReason created 1
FragmentModification created 1
ProteinDrug created 1
CrosslinkedResidue created 1
Cell created 1
GenomeEncodedEntity created 1
TranslationalModification created 1
GroupModifiedResidue created 1
ReferenceTherapeutic created 1
DeletedControlledVocabulary created 1
ReferenceIsoform created 1
RetractionStatus created 1
GeneticallyModifiedResidue created 1
Summation created 1
Compartment created 1
StableIdentifierReleaseStatus created 1
Depolymerisation created 1
GO_BiologicalProcess created 1
PsiMod created 1
Affiliation created 1
CatalystActivity created 1
Event created 1
EntityFunctionalStatus created 1
ReferenceRNASequence created 1
OtherEntity created 1
ReferenceDatabase created 1
ReactionlikeEvent created 1
RNADrug created 1
PositiveGeneExpressionRegulation created 1
Species created 1
NegativePrecedingEvent created 1
RegulationReference created 1
Drug created 1
ReferenceGroup created 1
CatalystActivityReference created 1
ReactionType created 1
Polymer created 1
GO_MolecularFunction created 1
AbstractModifiedResidue created 1
MarkerReference created 1
StableIdentifierHistory created 1
InstanceEdit created 1
LiteratureReference created 1
BlackBoxEvent created 1
FragmentReplacedModification created 1
ReferenceEntity created 1
Book created 1
CellType created 1
PhysicalEntity created 1
CellDevelopmentStep created 1
ReferenceGeneProduct created 1
_Release created 1
Regulation created 1
InterChainCrosslinkedResidue created 1
FailedReaction created 1
TranscriptionalModification created 1
DefinedSet created 1
DatabaseIdentifier created 1
PhysicalEntityCellType created 1
ReferenceSequence created 1
StableIdentifier created 1
Taxon created 1
Disease created 1
DatabaseObject created 1
_DeletedInstance created 1
FunctionalStatusType created 1
Anatomy created 1
Requirement created 1
FrontPage created 1
EntitySet created 1
ControlReference created 1
Pathway created 1
ChemicalDrug created 1
ExternalOntology created 1
PositiveRegulation created 1
ModifiedResidue created 1
Figure created 1
ModifiedNucleotide modified +
ReferenceMolecule modified +
_UpdateTracker modified +
EvidenceType modified +
IntraChainCrosslinkedResidue modified +
InteractionEvent modified +
PathwayDiagram modified +
Person modified +
ReferenceDNASequence modified +
SimpleEntity modified +
Reaction modified +
CellLineagePath modified +
ControlledVocabulary modified +
NegativeGeneExpressionRegulation modified +
_Deleted modified +
GO_CellularComponent modified +
URL modified +
ReviewStatus modified +
FragmentInsertionModification modified +
EntityWithAccessionedSequence modified +
FunctionalStatus modified +
NegativeRegulation modified +
FragmentDeletionModification modified +
CandidateSet modified +
NonsenseMutation modified +
Publication modified +
SequenceOntology modified +
ReplacedResidue modified +
Polymerisation modified +
Complex modified +
CrosslinkedResidue modified +
Cell modified +
ProteinDrug modified +
FragmentModification modified +
NegativePrecedingEventReason modified +
DrugActionType modified +
ReferenceIsoform modified +
DeletedControlledVocabulary modified +
ReferenceTherapeutic modified +
GenomeEncodedEntity modified +
GroupModifiedResidue modified +
TranslationalModification modified +
GeneticallyModifiedResidue modified +
RetractionStatus modified +
Summation modified +
GO_BiologicalProcess modified +
Depolymerisation modified +
PsiMod modified +
StableIdentifierReleaseStatus modified +
Compartment modified +
Event modified +
CatalystActivity modified +
Affiliation modified +
ReferenceRNASequence modified +
EntityFunctionalStatus modified +
OtherEntity modified +
ReactionlikeEvent modified +
ReferenceDatabase modified +
Species modified +
NegativePrecedingEvent modified +
RNADrug modified +
PositiveGeneExpressionRegulation modified +
RegulationReference modified +
Drug modified +
ReferenceGroup modified +
StableIdentifierHistory modified +
InstanceEdit modified +
MarkerReference modified +
AbstractModifiedResidue modified +
GO_MolecularFunction modified +
ReactionType modified +
Polymer modified +
CatalystActivityReference modified +
Book modified +
ReferenceEntity modified +
FragmentReplacedModification modified +
BlackBoxEvent modified +
LiteratureReference modified +
InterChainCrosslinkedResidue modified +
ReferenceGeneProduct modified +
PhysicalEntity modified +
CellDevelopmentStep modified +
_Release modified +
Regulation modified +
CellType modified +
FailedReaction modified +
PhysicalEntityCellType modified +
DefinedSet modified +
DatabaseIdentifier modified +
TranscriptionalModification modified +
StableIdentifier modified +
ReferenceSequence modified +
Disease modified +
DatabaseObject modified +
Taxon modified +
ChemicalDrug modified +
Pathway modified +
ControlReference modified +
FrontPage modified +
Requirement modified +
EntitySet modified +
Anatomy modified +
_DeletedInstance modified +
FunctionalStatusType modified +
Figure modified +
ModifiedResidue modified +
PositiveRegulation modified +
ExternalOntology modified +
BlackBoxEvent revised +
Polymerisation revised +
Complex revised +
CellDevelopmentStep revised +
OtherEntity revised +
PhysicalEntity revised +
InteractionEvent revised +
ProteinDrug revised +
Cell revised +
FailedReaction revised +
ReactionlikeEvent revised +
GenomeEncodedEntity revised +
RNADrug revised +
DefinedSet revised +
CellLineagePath revised +
Reaction revised +
SimpleEntity revised +
Drug revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
ChemicalDrug revised +
Depolymerisation revised +
Pathway revised +
Polymer revised +
CandidateSet revised +
Event revised +
Drug authored 1
Reaction authored +
CellLineagePath authored +
SimpleEntity authored 1
Event authored +
Polymer authored 1
CandidateSet authored 1
Pathway authored +
Depolymerisation authored +
ChemicalDrug authored 1
EntitySet authored 1
EntityWithAccessionedSequence authored 1
OtherEntity authored 1
Complex authored 1
Polymerisation authored +
CellDevelopmentStep authored +
PhysicalEntity authored 1
BlackBoxEvent authored +
DefinedSet authored 1
RNADrug authored 1
GenomeEncodedEntity authored 1
FailedReaction authored +
ReactionlikeEvent authored +
Cell authored 1
ProteinDrug authored 1
InteractionEvent authored +
_Deleted replacementInstances +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
BlackBoxEvent edited +
OtherEntity edited +
Complex edited +
Polymerisation edited +
PhysicalEntity edited +
CellDevelopmentStep edited +
ProteinDrug edited +
Cell edited +
ReactionlikeEvent edited +
FailedReaction edited +
InteractionEvent edited +
DefinedSet edited +
GenomeEncodedEntity edited +
RNADrug edited +
CellLineagePath edited +
Reaction edited +
SimpleEntity edited +
Drug edited +
ChemicalDrug edited +
Depolymerisation edited +
Pathway edited +
EntitySet edited +
EntityWithAccessionedSequence edited +
Event edited +
CandidateSet edited +
Polymer edited +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
CellLineagePath structureModified +
Event structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
Pathway structureModified +
Depolymerisation structureModified +
Drug reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
Reaction reviewed +
Event reviewed +
CandidateSet reviewed +
Polymer reviewed +
Depolymerisation reviewed +
ChemicalDrug reviewed +
Pathway reviewed +
EntitySet reviewed +
EntityWithAccessionedSequence reviewed +
Complex reviewed +
Polymerisation reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
RNADrug reviewed +
Cell reviewed +
ProteinDrug reviewed +
ReactionlikeEvent reviewed +
FailedReaction reviewed +
InteractionEvent reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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