Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Pathway structureModified +
CellLineagePath structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
Depolymerisation authored +
GenomeEncodedEntity authored 1
ChemicalDrug authored 1
Drug authored 1
EntitySet authored 1
CandidateSet authored 1
CellLineagePath authored +
Polymer authored 1
Pathway authored +
PhysicalEntity authored 1
Complex authored 1
EntityWithAccessionedSequence authored 1
RNADrug authored 1
FailedReaction authored +
OtherEntity authored 1
ReactionlikeEvent authored +
Event authored +
Cell authored 1
BlackBoxEvent authored +
SimpleEntity authored 1
DefinedSet authored 1
ProteinDrug authored 1
InteractionEvent authored +
Polymerisation authored +
Reaction authored +
CellDevelopmentStep authored +
InteractionEvent reviewed +
Polymerisation reviewed +
CellDevelopmentStep reviewed +
Reaction reviewed +
DefinedSet reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
ReactionlikeEvent reviewed +
Cell reviewed +
Event reviewed +
SimpleEntity reviewed +
BlackBoxEvent reviewed +
RNADrug reviewed +
FailedReaction reviewed +
Complex reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
Polymer reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
EntitySet reviewed +
CandidateSet reviewed +
Depolymerisation reviewed +
GenomeEncodedEntity reviewed +
ChemicalDrug reviewed +
Drug reviewed +
Regulation created 1
NonsenseMutation created 1
ProteinDrug created 1
RNADrug created 1
ExternalOntology created 1
ReactionlikeEvent created 1
Requirement created 1
Publication created 1
ReferenceIsoform created 1
ControlledVocabulary created 1
Cell created 1
Book created 1
CellLineagePath created 1
CellType created 1
Person created 1
IntraChainCrosslinkedResidue created 1
GroupModifiedResidue created 1
SequenceOntology created 1
Species created 1
FragmentDeletionModification created 1
URL created 1
StableIdentifierHistory created 1
GenomeEncodedEntity created 1
PsiMod created 1
ChemicalDrug created 1
CatalystActivity created 1
Disease created 1
CandidateSet created 1
ReferenceDNASequence created 1
TranscriptionalModification created 1
InteractionEvent created 1
StableIdentifier created 1
ReferenceEntity created 1
CellDevelopmentStep created 1
Anatomy created 1
ModifiedNucleotide created 1
StableIdentifierReleaseStatus created 1
EvidenceType created 1
OtherEntity created 1
GO_BiologicalProcess created 1
ReferenceGroup created 1
SimpleEntity created 1
ReactionType created 1
Polymer created 1
AbstractModifiedResidue created 1
FunctionalStatus created 1
CrosslinkedResidue created 1
RetractionStatus created 1
ControlReference created 1
Affiliation created 1
NegativePrecedingEventReason created 1
GeneticallyModifiedResidue created 1
FragmentReplacedModification created 1
DefinedSet created 1
Figure created 1
PositiveRegulation created 1
ReviewStatus created 1
DeletedControlledVocabulary created 1
MarkerReference created 1
Reaction created 1
NegativeRegulation created 1
PhysicalEntityCellType created 1
FrontPage created 1
NegativePrecedingEvent created 1
ReferenceSequence created 1
BlackBoxEvent created 1
DatabaseObject created 1
EntityFunctionalStatus created 1
Compartment created 1
Pathway created 1
Complex created 1
ReferenceDatabase created 1
ReferenceMolecule created 1
ReplacedResidue created 1
EntityWithAccessionedSequence created 1
ReferenceTherapeutic created 1
ReferenceRNASequence created 1
GO_MolecularFunction created 1
PositiveGeneExpressionRegulation created 1
NegativeGeneExpressionRegulation created 1
InterChainCrosslinkedResidue created 1
ModifiedResidue created 1
PathwayDiagram created 1
Polymerisation created 1
FailedReaction created 1
Summation created 1
GO_CellularComponent created 1
InstanceEdit created 1
DrugActionType created 1
Event created 1
_Release created 1
LiteratureReference created 1
_DeletedInstance created 1
Taxon created 1
PhysicalEntity created 1
_Deleted created 1
FragmentModification created 1
CatalystActivityReference created 1
_UpdateTracker created 1
FragmentInsertionModification created 1
Depolymerisation created 1
FunctionalStatusType created 1
ReferenceGeneProduct created 1
Drug created 1
EntitySet created 1
TranslationalModification created 1
DatabaseIdentifier created 1
RegulationReference created 1
Disease modified +
PsiMod modified +
GenomeEncodedEntity modified +
StableIdentifierHistory modified +
ChemicalDrug modified +
CatalystActivity modified +
CandidateSet modified +
Species modified +
CellLineagePath modified +
CellType modified +
Person modified +
IntraChainCrosslinkedResidue modified +
GroupModifiedResidue modified +
SequenceOntology modified +
FragmentDeletionModification modified +
URL modified +
ExternalOntology modified +
RNADrug modified +
Cell modified +
Book modified +
Requirement modified +
ReactionlikeEvent modified +
Publication modified +
ControlledVocabulary modified +
ReferenceIsoform modified +
ProteinDrug modified +
Regulation modified +
NonsenseMutation modified +
GeneticallyModifiedResidue modified +
NegativePrecedingEventReason modified +
FragmentReplacedModification modified +
Polymer modified +
ReactionType modified +
CrosslinkedResidue modified +
RetractionStatus modified +
Affiliation modified +
ControlReference modified +
FunctionalStatus modified +
AbstractModifiedResidue modified +
EvidenceType modified +
ModifiedNucleotide modified +
StableIdentifierReleaseStatus modified +
SimpleEntity modified +
ReferenceGroup modified +
OtherEntity modified +
GO_BiologicalProcess modified +
ReferenceDNASequence modified +
TranscriptionalModification modified +
CellDevelopmentStep modified +
ReferenceEntity modified +
Anatomy modified +
InteractionEvent modified +
StableIdentifier modified +
ReferenceRNASequence modified +
ReferenceTherapeutic modified +
GO_MolecularFunction modified +
Pathway modified +
EntityFunctionalStatus modified +
Compartment modified +
ReferenceMolecule modified +
ReplacedResidue modified +
EntityWithAccessionedSequence modified +
ReferenceDatabase modified +
Complex modified +
PhysicalEntityCellType modified +
FrontPage modified +
ReferenceSequence modified +
BlackBoxEvent modified +
DatabaseObject modified +
NegativePrecedingEvent modified +
ReviewStatus modified +
DefinedSet modified +
PositiveRegulation modified +
Figure modified +
Reaction modified +
NegativeRegulation modified +
MarkerReference modified +
DeletedControlledVocabulary modified +
ReferenceGeneProduct modified +
Drug modified +
FunctionalStatusType modified +
_UpdateTracker modified +
FragmentInsertionModification modified +
Depolymerisation modified +
TranslationalModification modified +
DatabaseIdentifier modified +
EntitySet modified +
RegulationReference modified +
Taxon modified +
PhysicalEntity modified +
_DeletedInstance modified +
LiteratureReference modified +
FragmentModification modified +
CatalystActivityReference modified +
_Deleted modified +
Summation modified +
FailedReaction modified +
DrugActionType modified +
_Release modified +
Event modified +
GO_CellularComponent modified +
InstanceEdit modified +
PositiveGeneExpressionRegulation modified +
Polymerisation modified +
InterChainCrosslinkedResidue modified +
NegativeGeneExpressionRegulation modified +
ModifiedResidue modified +
PathwayDiagram modified +
_Deleted replacementInstances +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
Polymer edited +
Pathway edited +
PhysicalEntity edited +
CellLineagePath edited +
EntityWithAccessionedSequence edited +
Complex edited +
Drug edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
ChemicalDrug edited +
CandidateSet edited +
EntitySet edited +
ProteinDrug edited +
DefinedSet edited +
Polymerisation edited +
Reaction edited +
CellDevelopmentStep edited +
InteractionEvent edited +
RNADrug edited +
FailedReaction edited +
Event edited +
Cell edited +
SimpleEntity edited +
BlackBoxEvent edited +
OtherEntity edited +
ReactionlikeEvent edited +
InteractionEvent revised +
Polymerisation revised +
Reaction revised +
CellDevelopmentStep revised +
DefinedSet revised +
ProteinDrug revised +
OtherEntity revised +
ReactionlikeEvent revised +
Cell revised +
Event revised +
BlackBoxEvent revised +
SimpleEntity revised +
RNADrug revised +
FailedReaction revised +
Complex revised +
EntityWithAccessionedSequence revised +
CellLineagePath revised +
Polymer revised +
Pathway revised +
PhysicalEntity revised +
EntitySet revised +
CandidateSet revised +
Depolymerisation revised +
ChemicalDrug revised +
GenomeEncodedEntity revised +
Drug revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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