Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
OtherEntity revised +
Pathway revised +
EntityWithAccessionedSequence revised +
Polymer revised +
BlackBoxEvent revised +
Complex revised +
PhysicalEntity revised +
ChemicalDrug revised +
InteractionEvent revised +
CellDevelopmentStep revised +
Depolymerisation revised +
FailedReaction revised +
Cell revised +
Event revised +
EntitySet revised +
Drug revised +
RNADrug revised +
ProteinDrug revised +
Polymerisation revised +
Reaction revised +
CandidateSet revised +
ReactionlikeEvent revised +
SimpleEntity revised +
CellLineagePath revised +
GenomeEncodedEntity revised +
DefinedSet revised +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Pathway structureModified +
Event structureModified +
Polymerisation structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
Regulation created 1
_Deleted created 1
_UpdateTracker created 1
InstanceEdit created 1
BlackBoxEvent created 1
Species created 1
CrosslinkedResidue created 1
ChemicalDrug created 1
ReferenceSequence created 1
ReferenceDNASequence created 1
InteractionEvent created 1
ReviewStatus created 1
CatalystActivity created 1
Compartment created 1
TranscriptionalModification created 1
CellDevelopmentStep created 1
Book created 1
NegativeRegulation created 1
StableIdentifier created 1
Polymerisation created 1
CandidateSet created 1
NegativePrecedingEventReason created 1
LiteratureReference created 1
EvidenceType created 1
GO_BiologicalProcess created 1
GenomeEncodedEntity created 1
ReferenceRNASequence created 1
DeletedControlledVocabulary created 1
Summation created 1
CellType created 1
FragmentDeletionModification created 1
StableIdentifierReleaseStatus created 1
FunctionalStatusType created 1
ReferenceIsoform created 1
PathwayDiagram created 1
ReactionType created 1
NegativePrecedingEvent created 1
PhysicalEntity created 1
ReferenceTherapeutic created 1
ControlReference created 1
Cell created 1
ReferenceDatabase created 1
EntitySet created 1
CatalystActivityReference created 1
RNADrug created 1
ReplacedResidue created 1
Reaction created 1
FragmentModification created 1
Anatomy created 1
PositiveRegulation created 1
AbstractModifiedResidue created 1
FragmentReplacedModification created 1
GeneticallyModifiedResidue created 1
InterChainCrosslinkedResidue created 1
Disease created 1
RetractionStatus created 1
OtherEntity created 1
FunctionalStatus created 1
Pathway created 1
Polymer created 1
MarkerReference created 1
PositiveGeneExpressionRegulation created 1
ReferenceEntity created 1
Publication created 1
DatabaseIdentifier created 1
Taxon created 1
ReferenceMolecule created 1
Person created 1
Requirement created 1
FragmentInsertionModification created 1
GroupModifiedResidue created 1
ModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
ReferenceGroup created 1
Affiliation created 1
CellLineagePath created 1
PhysicalEntityCellType created 1
SequenceOntology created 1
EntityFunctionalStatus created 1
DatabaseObject created 1
EntityWithAccessionedSequence created 1
ModifiedNucleotide created 1
NonsenseMutation created 1
DrugActionType created 1
Complex created 1
ControlledVocabulary created 1
PsiMod created 1
_Release created 1
FrontPage created 1
GO_MolecularFunction created 1
TranslationalModification created 1
Depolymerisation created 1
FailedReaction created 1
IntraChainCrosslinkedResidue created 1
Event created 1
ProteinDrug created 1
Drug created 1
SimpleEntity created 1
ReactionlikeEvent created 1
URL created 1
_DeletedInstance created 1
RegulationReference created 1
StableIdentifierHistory created 1
Figure created 1
ExternalOntology created 1
DefinedSet created 1
GO_CellularComponent created 1
ReferenceGeneProduct created 1
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
InteractionEvent authored +
CellDevelopmentStep authored +
PhysicalEntity authored 1
Complex authored 1
ChemicalDrug authored 1
Polymer authored 1
BlackBoxEvent authored +
OtherEntity authored 1
EntityWithAccessionedSequence authored 1
Pathway authored +
GenomeEncodedEntity authored 1
DefinedSet authored 1
SimpleEntity authored 1
ReactionlikeEvent authored +
CellLineagePath authored +
Drug authored 1
RNADrug authored 1
ProteinDrug authored 1
CandidateSet authored 1
Reaction authored +
Polymerisation authored +
FailedReaction authored +
Depolymerisation authored +
Event authored +
EntitySet authored 1
Cell authored 1
Cell modified +
ReferenceDatabase modified +
EntitySet modified +
CatalystActivityReference modified +
RNADrug modified +
ReplacedResidue modified +
Reaction modified +
FragmentModification modified +
Anatomy modified +
PositiveRegulation modified +
AbstractModifiedResidue modified +
FragmentReplacedModification modified +
InterChainCrosslinkedResidue modified +
GeneticallyModifiedResidue modified +
Summation modified +
CellType modified +
FragmentDeletionModification modified +
StableIdentifierReleaseStatus modified +
FunctionalStatusType modified +
ReferenceIsoform modified +
ReactionType modified +
PathwayDiagram modified +
NegativePrecedingEvent modified +
PhysicalEntity modified +
ControlReference modified +
ReferenceTherapeutic modified +
NegativeRegulation modified +
StableIdentifier modified +
Polymerisation modified +
LiteratureReference modified +
NegativePrecedingEventReason modified +
CandidateSet modified +
EvidenceType modified +
GO_BiologicalProcess modified +
GenomeEncodedEntity modified +
ReferenceRNASequence modified +
DeletedControlledVocabulary modified +
Regulation modified +
_Deleted modified +
_UpdateTracker modified +
InstanceEdit modified +
BlackBoxEvent modified +
CrosslinkedResidue modified +
Species modified +
ChemicalDrug modified +
ReferenceSequence modified +
ReferenceDNASequence modified +
InteractionEvent modified +
ReviewStatus modified +
CatalystActivity modified +
Compartment modified +
CellDevelopmentStep modified +
Book modified +
TranscriptionalModification modified +
FailedReaction modified +
Depolymerisation modified +
IntraChainCrosslinkedResidue modified +
Event modified +
ProteinDrug modified +
Drug modified +
ReactionlikeEvent modified +
SimpleEntity modified +
URL modified +
_DeletedInstance modified +
StableIdentifierHistory modified +
RegulationReference modified +
Figure modified +
ExternalOntology modified +
DefinedSet modified +
ReferenceGeneProduct modified +
GO_CellularComponent modified +
DatabaseObject modified +
EntityWithAccessionedSequence modified +
NonsenseMutation modified +
ModifiedNucleotide modified +
DrugActionType modified +
Complex modified +
ControlledVocabulary modified +
PsiMod modified +
_Release modified +
FrontPage modified +
GO_MolecularFunction modified +
TranslationalModification modified +
Requirement modified +
FragmentInsertionModification modified +
ModifiedResidue modified +
GroupModifiedResidue modified +
NegativeGeneExpressionRegulation modified +
ReferenceGroup modified +
Affiliation modified +
CellLineagePath modified +
PhysicalEntityCellType modified +
SequenceOntology modified +
EntityFunctionalStatus modified +
Disease modified +
RetractionStatus modified +
FunctionalStatus modified +
OtherEntity modified +
Pathway modified +
Polymer modified +
MarkerReference modified +
PositiveGeneExpressionRegulation modified +
ReferenceEntity modified +
DatabaseIdentifier modified +
Publication modified +
Taxon modified +
ReferenceMolecule modified +
Person modified +
GenomeEncodedEntity reviewed +
DefinedSet reviewed +
ReactionlikeEvent reviewed +
SimpleEntity reviewed +
CellLineagePath reviewed +
Drug reviewed +
RNADrug reviewed +
ProteinDrug reviewed +
Polymerisation reviewed +
CandidateSet reviewed +
Reaction reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
Cell reviewed +
EntitySet reviewed +
Event reviewed +
InteractionEvent reviewed +
CellDevelopmentStep reviewed +
Complex reviewed +
PhysicalEntity reviewed +
ChemicalDrug reviewed +
Polymer reviewed +
BlackBoxEvent reviewed +
OtherEntity reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
ChemicalDrug edited +
Complex edited +
PhysicalEntity edited +
CellDevelopmentStep edited +
InteractionEvent edited +
Pathway edited +
EntityWithAccessionedSequence edited +
OtherEntity edited +
BlackBoxEvent edited +
Polymer edited +
CellLineagePath edited +
SimpleEntity edited +
ReactionlikeEvent edited +
DefinedSet edited +
GenomeEncodedEntity edited +
Cell edited +
EntitySet edited +
Event edited +
Depolymerisation edited +
FailedReaction edited +
Polymerisation edited +
Reaction edited +
CandidateSet edited +
RNADrug edited +
Drug edited +
ProteinDrug edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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