Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
RetractionStatus created 1
Reaction created 1
DatabaseObject created 1
TranslationalModification created 1
Event created 1
EntityFunctionalStatus created 1
BlackBoxEvent created 1
ReactionlikeEvent created 1
LiteratureReference created 1
CandidateSet created 1
ReferenceEntity created 1
DeletedControlledVocabulary created 1
ControlledVocabulary created 1
_UpdateTracker created 1
Pathway created 1
AbstractModifiedResidue created 1
ReferenceMolecule created 1
RegulationReference created 1
CatalystActivity created 1
_Release created 1
Summation created 1
Taxon created 1
FragmentModification created 1
CellLineagePath created 1
ReferenceRNASequence created 1
MarkerReference created 1
ReferenceDatabase created 1
Person created 1
FrontPage created 1
ReferenceIsoform created 1
GO_BiologicalProcess created 1
PsiMod created 1
ModifiedResidue created 1
GO_MolecularFunction created 1
Polymer created 1
NegativeRegulation created 1
NegativePrecedingEventReason created 1
FunctionalStatusType created 1
EvidenceType created 1
Complex created 1
GenomeEncodedEntity created 1
FunctionalStatus created 1
GroupModifiedResidue created 1
TranscriptionalModification created 1
DefinedSet created 1
StableIdentifierReleaseStatus created 1
Polymerisation created 1
ReferenceGroup created 1
NegativeGeneExpressionRegulation created 1
StableIdentifier created 1
Publication created 1
InteractionEvent created 1
ReferenceDNASequence created 1
ReviewStatus created 1
FragmentInsertionModification created 1
PathwayDiagram created 1
ReferenceSequence created 1
Regulation created 1
FragmentDeletionModification created 1
CellType created 1
ExternalOntology created 1
Figure created 1
Book created 1
ChemicalDrug created 1
Depolymerisation created 1
FragmentReplacedModification created 1
PhysicalEntity created 1
CatalystActivityReference created 1
ReactionType created 1
GeneticallyModifiedResidue created 1
GO_CellularComponent created 1
FailedReaction created 1
Requirement created 1
_Deleted created 1
Species created 1
EntityWithAccessionedSequence created 1
ModifiedNucleotide created 1
ReferenceTherapeutic created 1
RNADrug created 1
_DeletedInstance created 1
IntraChainCrosslinkedResidue created 1
InterChainCrosslinkedResidue created 1
DatabaseIdentifier created 1
PositiveGeneExpressionRegulation created 1
CrosslinkedResidue created 1
InstanceEdit created 1
Disease created 1
URL created 1
Cell created 1
CellDevelopmentStep created 1
PositiveRegulation created 1
SimpleEntity created 1
Drug created 1
Anatomy created 1
Compartment created 1
ProteinDrug created 1
ReferenceGeneProduct created 1
DrugActionType created 1
NegativePrecedingEvent created 1
OtherEntity created 1
ControlReference created 1
Affiliation created 1
NonsenseMutation created 1
ReplacedResidue created 1
SequenceOntology created 1
StableIdentifierHistory created 1
EntitySet created 1
CellLineagePath edited +
EntitySet edited +
InteractionEvent edited +
RNADrug edited +
Pathway edited +
OtherEntity edited +
Polymerisation edited +
CandidateSet edited +
DefinedSet edited +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
BlackBoxEvent edited +
Drug edited +
Complex edited +
GenomeEncodedEntity edited +
FailedReaction edited +
PhysicalEntity edited +
SimpleEntity edited +
Event edited +
Depolymerisation edited +
CellDevelopmentStep edited +
Cell edited +
Polymer edited +
Reaction edited +
ChemicalDrug edited +
EntitySet authored 1
CellLineagePath authored +
InteractionEvent authored +
Pathway authored +
RNADrug authored 1
OtherEntity authored 1
CandidateSet authored 1
Polymerisation authored +
ProteinDrug authored 1
EntityWithAccessionedSequence authored 1
DefinedSet authored 1
ReactionlikeEvent authored +
BlackBoxEvent authored +
Complex authored 1
GenomeEncodedEntity authored 1
FailedReaction authored +
Drug authored 1
Event authored +
SimpleEntity authored 1
PhysicalEntity authored 1
Depolymerisation authored +
CellDevelopmentStep authored +
Cell authored 1
Polymer authored 1
Reaction authored +
ChemicalDrug authored 1
_Deleted replacementInstances +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
Pathway structureModified +
Event structureModified +
Polymerisation structureModified +
Reaction structureModified +
Reaction modified +
RetractionStatus modified +
TranslationalModification modified +
DatabaseObject modified +
Event modified +
BlackBoxEvent modified +
EntityFunctionalStatus modified +
LiteratureReference modified +
ReactionlikeEvent modified +
DeletedControlledVocabulary modified +
CandidateSet modified +
ReferenceEntity modified +
_UpdateTracker modified +
ControlledVocabulary modified +
RegulationReference modified +
AbstractModifiedResidue modified +
Pathway modified +
ReferenceMolecule modified +
FragmentModification modified +
CatalystActivity modified +
_Release modified +
Summation modified +
Taxon modified +
Person modified +
CellLineagePath modified +
ReferenceRNASequence modified +
ReferenceDatabase modified +
MarkerReference modified +
PsiMod modified +
GO_MolecularFunction modified +
ModifiedResidue modified +
ReferenceIsoform modified +
FrontPage modified +
GO_BiologicalProcess modified +
FunctionalStatusType modified +
NegativePrecedingEventReason modified +
EvidenceType modified +
Polymer modified +
NegativeRegulation modified +
FunctionalStatus modified +
Complex modified +
GenomeEncodedEntity modified +
DefinedSet modified +
TranscriptionalModification modified +
GroupModifiedResidue modified +
NegativeGeneExpressionRegulation modified +
StableIdentifier modified +
StableIdentifierReleaseStatus modified +
Polymerisation modified +
ReferenceGroup modified +
ReferenceDNASequence modified +
Publication modified +
InteractionEvent modified +
Regulation modified +
FragmentDeletionModification modified +
ReviewStatus modified +
PathwayDiagram modified +
FragmentInsertionModification modified +
ReferenceSequence modified +
ChemicalDrug modified +
Book modified +
CellType modified +
ExternalOntology modified +
Figure modified +
PhysicalEntity modified +
ReactionType modified +
CatalystActivityReference modified +
Depolymerisation modified +
FragmentReplacedModification modified +
Requirement modified +
_Deleted modified +
GeneticallyModifiedResidue modified +
GO_CellularComponent modified +
FailedReaction modified +
EntityWithAccessionedSequence modified +
Species modified +
ModifiedNucleotide modified +
IntraChainCrosslinkedResidue modified +
InterChainCrosslinkedResidue modified +
RNADrug modified +
ReferenceTherapeutic modified +
_DeletedInstance modified +
DatabaseIdentifier modified +
CrosslinkedResidue modified +
PositiveGeneExpressionRegulation modified +
Disease modified +
URL modified +
InstanceEdit modified +
PositiveRegulation modified +
SimpleEntity modified +
Cell modified +
CellDevelopmentStep modified +
Compartment modified +
Anatomy modified +
Drug modified +
ProteinDrug modified +
OtherEntity modified +
DrugActionType modified +
NegativePrecedingEvent modified +
ControlReference modified +
ReferenceGeneProduct modified +
NonsenseMutation modified +
ReplacedResidue modified +
Affiliation modified +
SequenceOntology modified +
EntitySet modified +
StableIdentifierHistory modified +
EntityWithAccessionedSequence reviewed +
ProteinDrug reviewed +
DefinedSet reviewed +
ReactionlikeEvent reviewed +
BlackBoxEvent reviewed +
Complex reviewed +
GenomeEncodedEntity reviewed +
FailedReaction reviewed +
Drug reviewed +
Event reviewed +
SimpleEntity reviewed +
PhysicalEntity reviewed +
Cell reviewed +
Depolymerisation reviewed +
CellDevelopmentStep reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
Reaction reviewed +
EntitySet reviewed +
CellLineagePath reviewed +
InteractionEvent reviewed +
Pathway reviewed +
RNADrug reviewed +
OtherEntity reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
BlackBoxEvent revised +
Drug revised +
GenomeEncodedEntity revised +
Complex revised +
FailedReaction revised +
DefinedSet revised +
EntityWithAccessionedSequence revised +
ProteinDrug revised +
ReactionlikeEvent revised +
ChemicalDrug revised +
Reaction revised +
PhysicalEntity revised +
Event revised +
SimpleEntity revised +
CellDevelopmentStep revised +
Depolymerisation revised +
Cell revised +
Polymer revised +
InteractionEvent revised +
CellLineagePath revised +
EntitySet revised +
OtherEntity revised +
Polymerisation revised +
CandidateSet revised +
RNADrug revised +
Pathway revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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