Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
BlackBoxEvent structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Event structureModified +
Polymerisation structureModified +
Pathway structureModified +
Reaction structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
ChemicalDrug authored 1
OtherEntity authored 1
PhysicalEntity authored 1
CandidateSet authored 1
Polymerisation authored +
Drug authored 1
ReactionlikeEvent authored +
CellLineagePath authored +
ProteinDrug authored 1
EntitySet authored 1
Polymer authored 1
GenomeEncodedEntity authored 1
SimpleEntity authored 1
Complex authored 1
DefinedSet authored 1
EntityWithAccessionedSequence authored 1
Pathway authored +
Reaction authored +
Depolymerisation authored +
RNADrug authored 1
Cell authored 1
BlackBoxEvent authored +
InteractionEvent authored +
CellDevelopmentStep authored +
Event authored +
FailedReaction authored +
OtherEntity edited +
PhysicalEntity edited +
CandidateSet edited +
Polymerisation edited +
ChemicalDrug edited +
ReactionlikeEvent edited +
Drug edited +
EntitySet edited +
Polymer edited +
GenomeEncodedEntity edited +
SimpleEntity edited +
CellLineagePath edited +
ProteinDrug edited +
Complex edited +
DefinedSet edited +
Pathway edited +
Reaction edited +
EntityWithAccessionedSequence edited +
Cell edited +
RNADrug edited +
Depolymerisation edited +
CellDevelopmentStep edited +
InteractionEvent edited +
BlackBoxEvent edited +
Event edited +
FailedReaction edited +
CandidateSet created 1
ReferenceGeneProduct created 1
ReferenceDatabase created 1
PositiveRegulation created 1
Figure created 1
ReactionlikeEvent created 1
StableIdentifierReleaseStatus created 1
FunctionalStatusType created 1
SimpleEntity created 1
MarkerReference created 1
Polymer created 1
ControlledVocabulary created 1
CellType created 1
DatabaseIdentifier created 1
GroupModifiedResidue created 1
DeletedControlledVocabulary created 1
ReplacedResidue created 1
InstanceEdit created 1
SequenceOntology created 1
DefinedSet created 1
_Release created 1
Compartment created 1
TranslationalModification created 1
Reaction created 1
Pathway created 1
FragmentModification created 1
Person created 1
ControlReference created 1
InterChainCrosslinkedResidue created 1
Disease created 1
RNADrug created 1
StableIdentifier created 1
FunctionalStatus created 1
InteractionEvent created 1
DrugActionType created 1
BlackBoxEvent created 1
ReferenceIsoform created 1
Publication created 1
FailedReaction created 1
ReferenceGroup created 1
FragmentDeletionModification created 1
NegativeGeneExpressionRegulation created 1
PsiMod created 1
_DeletedInstance created 1
Drug created 1
ReferenceDNASequence created 1
EntitySet created 1
ReferenceTherapeutic created 1
ReviewStatus created 1
CatalystActivity created 1
IntraChainCrosslinkedResidue created 1
Summation created 1
DatabaseObject created 1
_UpdateTracker created 1
Regulation created 1
URL created 1
Depolymerisation created 1
FragmentInsertionModification created 1
Requirement created 1
PhysicalEntityCellType created 1
CrosslinkedResidue created 1
Event created 1
EntityFunctionalStatus created 1
Anatomy created 1
Affiliation created 1
RegulationReference created 1
FragmentReplacedModification created 1
GenomeEncodedEntity created 1
FrontPage created 1
LiteratureReference created 1
PathwayDiagram created 1
TranscriptionalModification created 1
ModifiedResidue created 1
GO_CellularComponent created 1
NegativePrecedingEvent created 1
Book created 1
ExternalOntology created 1
PositiveGeneExpressionRegulation created 1
CellDevelopmentStep created 1
NegativeRegulation created 1
ModifiedNucleotide created 1
NegativePrecedingEventReason created 1
OtherEntity created 1
PhysicalEntity created 1
Polymerisation created 1
ChemicalDrug created 1
StableIdentifierHistory created 1
GO_BiologicalProcess created 1
_Deleted created 1
GO_MolecularFunction created 1
GeneticallyModifiedResidue created 1
ReferenceMolecule created 1
ReferenceSequence created 1
ProteinDrug created 1
CellLineagePath created 1
Complex created 1
Species created 1
EntityWithAccessionedSequence created 1
RetractionStatus created 1
Cell created 1
EvidenceType created 1
ReferenceRNASequence created 1
AbstractModifiedResidue created 1
ReferenceEntity created 1
NonsenseMutation created 1
Taxon created 1
ReactionType created 1
CatalystActivityReference created 1
ReferenceTherapeutic modified +
EntitySet modified +
ReviewStatus modified +
IntraChainCrosslinkedResidue modified +
CatalystActivity modified +
PsiMod modified +
_DeletedInstance modified +
NegativeGeneExpressionRegulation modified +
ReferenceDNASequence modified +
Drug modified +
Requirement modified +
FragmentInsertionModification modified +
Event modified +
PhysicalEntityCellType modified +
CrosslinkedResidue modified +
DatabaseObject modified +
Summation modified +
_UpdateTracker modified +
URL modified +
Depolymerisation modified +
Regulation modified +
ControlledVocabulary modified +
CellType modified +
DatabaseIdentifier modified +
SimpleEntity modified +
MarkerReference modified +
Polymer modified +
GroupModifiedResidue modified +
DeletedControlledVocabulary modified +
ReplacedResidue modified +
SequenceOntology modified +
DefinedSet modified +
InstanceEdit modified +
_Release modified +
CandidateSet modified +
PositiveRegulation modified +
ReferenceDatabase modified +
ReferenceGeneProduct modified +
ReactionlikeEvent modified +
Figure modified +
StableIdentifierReleaseStatus modified +
FunctionalStatusType modified +
InteractionEvent modified +
ReferenceIsoform modified +
BlackBoxEvent modified +
DrugActionType modified +
FailedReaction modified +
Publication modified +
FragmentDeletionModification modified +
ReferenceGroup modified +
FragmentModification modified +
Reaction modified +
Pathway modified +
TranslationalModification modified +
Compartment modified +
RNADrug modified +
Disease modified +
InterChainCrosslinkedResidue modified +
ControlReference modified +
Person modified +
StableIdentifier modified +
FunctionalStatus modified +
CellLineagePath modified +
ProteinDrug modified +
ReferenceMolecule modified +
ReferenceSequence modified +
Complex modified +
Species modified +
OtherEntity modified +
Polymerisation modified +
PhysicalEntity modified +
ChemicalDrug modified +
GO_BiologicalProcess modified +
StableIdentifierHistory modified +
_Deleted modified +
GeneticallyModifiedResidue modified +
GO_MolecularFunction modified +
AbstractModifiedResidue modified +
ReferenceRNASequence modified +
ReferenceEntity modified +
NonsenseMutation modified +
EvidenceType modified +
Taxon modified +
CatalystActivityReference modified +
ReactionType modified +
EntityWithAccessionedSequence modified +
Cell modified +
RetractionStatus modified +
GenomeEncodedEntity modified +
FragmentReplacedModification modified +
FrontPage modified +
LiteratureReference modified +
PathwayDiagram modified +
EntityFunctionalStatus modified +
Affiliation modified +
Anatomy modified +
RegulationReference modified +
CellDevelopmentStep modified +
NegativeRegulation modified +
NegativePrecedingEventReason modified +
ModifiedNucleotide modified +
GO_CellularComponent modified +
NegativePrecedingEvent modified +
TranscriptionalModification modified +
ModifiedResidue modified +
ExternalOntology modified +
Book modified +
PositiveGeneExpressionRegulation modified +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
_Deleted replacementInstances +
DefinedSet revised +
Complex revised +
SimpleEntity revised +
GenomeEncodedEntity revised +
Polymer revised +
EntitySet revised +
ProteinDrug revised +
CellLineagePath revised +
ReactionlikeEvent revised +
Drug revised +
Polymerisation revised +
OtherEntity revised +
PhysicalEntity revised +
CandidateSet revised +
ChemicalDrug revised +
FailedReaction revised +
Event revised +
CellDevelopmentStep revised +
InteractionEvent revised +
BlackBoxEvent revised +
Cell revised +
RNADrug revised +
Depolymerisation revised +
Reaction revised +
Pathway revised +
EntityWithAccessionedSequence revised +
EntityWithAccessionedSequence reviewed +
Reaction reviewed +
Pathway reviewed +
Depolymerisation reviewed +
Cell reviewed +
RNADrug reviewed +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
CellDevelopmentStep reviewed +
Event reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
PhysicalEntity reviewed +
OtherEntity reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
CellLineagePath reviewed +
ProteinDrug reviewed +
EntitySet reviewed +
GenomeEncodedEntity reviewed +
Polymer reviewed +
SimpleEntity reviewed +
Complex reviewed +
DefinedSet reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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