Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Book modified +
DrugActionType modified +
PhysicalEntityCellType modified +
_Release modified +
ControlledVocabulary modified +
IntraChainCrosslinkedResidue modified +
StableIdentifier modified +
Depolymerisation modified +
_DeletedInstance modified +
RNADrug modified +
Pathway modified +
SimpleEntity modified +
GeneticallyModifiedResidue modified +
ReactionType modified +
CellLineagePath modified +
DefinedSet modified +
CellDevelopmentStep modified +
ReferenceIsoform modified +
NegativePrecedingEventReason modified +
Figure modified +
BlackBoxEvent modified +
FunctionalStatusType modified +
LiteratureReference modified +
EntitySet modified +
FragmentInsertionModification modified +
FailedReaction modified +
StableIdentifierHistory modified +
Event modified +
PositiveGeneExpressionRegulation modified +
ReferenceDNASequence modified +
Species modified +
PathwayDiagram modified +
TranscriptionalModification modified +
SequenceOntology modified +
Cell modified +
PhysicalEntity modified +
Anatomy modified +
ReferenceTherapeutic modified +
CandidateSet modified +
FrontPage modified +
ControlReference modified +
EvidenceType modified +
GO_CellularComponent modified +
OtherEntity modified +
FragmentReplacedModification modified +
ExternalOntology modified +
Regulation modified +
GO_BiologicalProcess modified +
_UpdateTracker modified +
GenomeEncodedEntity modified +
ReferenceGeneProduct modified +
Disease modified +
FunctionalStatus modified +
NegativeRegulation modified +
Requirement modified +
AbstractModifiedResidue modified +
GO_MolecularFunction modified +
DatabaseObject modified +
ReferenceEntity modified +
CatalystActivity modified +
NonsenseMutation modified +
InstanceEdit modified +
RegulationReference modified +
EntityWithAccessionedSequence modified +
FragmentDeletionModification modified +
ReferenceSequence modified +
ReferenceGroup modified +
EntityFunctionalStatus modified +
ReplacedResidue modified +
RetractionStatus modified +
ModifiedResidue modified +
DeletedControlledVocabulary modified +
PsiMod modified +
FragmentModification modified +
NegativeGeneExpressionRegulation modified +
_Deleted modified +
MarkerReference modified +
Person modified +
Publication modified +
Polymer modified +
NegativePrecedingEvent modified +
ModifiedNucleotide modified +
ProteinDrug modified +
CatalystActivityReference modified +
ReactionlikeEvent modified +
Affiliation modified +
ReferenceDatabase modified +
Summation modified +
Polymerisation modified +
TranslationalModification modified +
ReferenceMolecule modified +
DatabaseIdentifier modified +
Taxon modified +
PositiveRegulation modified +
Drug modified +
URL modified +
CrosslinkedResidue modified +
ChemicalDrug modified +
InteractionEvent modified +
StableIdentifierReleaseStatus modified +
GroupModifiedResidue modified +
CellType modified +
InterChainCrosslinkedResidue modified +
Compartment modified +
ReviewStatus modified +
Reaction modified +
ReferenceRNASequence modified +
Complex modified +
Cell created 1
SequenceOntology created 1
TranscriptionalModification created 1
PathwayDiagram created 1
Anatomy created 1
PhysicalEntity created 1
FailedReaction created 1
FragmentInsertionModification created 1
EntitySet created 1
LiteratureReference created 1
ReferenceDNASequence created 1
Species created 1
PositiveGeneExpressionRegulation created 1
StableIdentifierHistory created 1
Event created 1
FragmentReplacedModification created 1
ExternalOntology created 1
OtherEntity created 1
GenomeEncodedEntity created 1
_UpdateTracker created 1
Regulation created 1
GO_BiologicalProcess created 1
FrontPage created 1
CandidateSet created 1
ReferenceTherapeutic created 1
GO_CellularComponent created 1
EvidenceType created 1
ControlReference created 1
RNADrug created 1
_DeletedInstance created 1
Depolymerisation created 1
IntraChainCrosslinkedResidue created 1
StableIdentifier created 1
ControlledVocabulary created 1
Pathway created 1
Book created 1
PhysicalEntityCellType created 1
_Release created 1
DrugActionType created 1
NegativePrecedingEventReason created 1
FunctionalStatusType created 1
BlackBoxEvent created 1
Figure created 1
ReactionType created 1
SimpleEntity created 1
GeneticallyModifiedResidue created 1
CellDevelopmentStep created 1
ReferenceIsoform created 1
DefinedSet created 1
CellLineagePath created 1
ReactionlikeEvent created 1
CatalystActivityReference created 1
ProteinDrug created 1
NegativePrecedingEvent created 1
ModifiedNucleotide created 1
Summation created 1
ReferenceDatabase created 1
Affiliation created 1
Publication created 1
Person created 1
_Deleted created 1
MarkerReference created 1
Polymer created 1
InterChainCrosslinkedResidue created 1
CellType created 1
GroupModifiedResidue created 1
StableIdentifierReleaseStatus created 1
InteractionEvent created 1
ChemicalDrug created 1
Complex created 1
ReferenceRNASequence created 1
Reaction created 1
ReviewStatus created 1
Compartment created 1
TranslationalModification created 1
Polymerisation created 1
CrosslinkedResidue created 1
URL created 1
PositiveRegulation created 1
Drug created 1
Taxon created 1
DatabaseIdentifier created 1
ReferenceMolecule created 1
GO_MolecularFunction created 1
AbstractModifiedResidue created 1
CatalystActivity created 1
ReferenceEntity created 1
DatabaseObject created 1
FunctionalStatus created 1
Disease created 1
ReferenceGeneProduct created 1
Requirement created 1
NegativeRegulation created 1
PsiMod created 1
DeletedControlledVocabulary created 1
ModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
FragmentModification created 1
ReferenceSequence created 1
EntityWithAccessionedSequence created 1
FragmentDeletionModification created 1
RegulationReference created 1
InstanceEdit created 1
NonsenseMutation created 1
RetractionStatus created 1
ReplacedResidue created 1
EntityFunctionalStatus created 1
ReferenceGroup created 1
_Deleted replacementInstances +
Depolymerisation revised +
ProteinDrug revised +
Cell revised +
ReactionlikeEvent revised +
RNADrug revised +
PhysicalEntity revised +
Pathway revised +
EntitySet revised +
FailedReaction revised +
Event revised +
Polymer revised +
ChemicalDrug revised +
InteractionEvent revised +
OtherEntity revised +
BlackBoxEvent revised +
Reaction revised +
Complex revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
Polymerisation revised +
CandidateSet revised +
EntityWithAccessionedSequence revised +
CellLineagePath revised +
DefinedSet revised +
Drug revised +
CellDevelopmentStep revised +
Polymer authored 1
Event authored +
FailedReaction authored +
EntitySet authored 1
Pathway authored +
PhysicalEntity authored 1
RNADrug authored 1
ReactionlikeEvent authored +
Depolymerisation authored +
ProteinDrug authored 1
Cell authored 1
Drug authored 1
CellDevelopmentStep authored +
CellLineagePath authored +
DefinedSet authored 1
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
SimpleEntity authored 1
Polymerisation authored +
Complex authored 1
GenomeEncodedEntity authored 1
Reaction authored +
BlackBoxEvent authored +
OtherEntity authored 1
ChemicalDrug authored 1
InteractionEvent authored +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
EntitySet reviewed +
FailedReaction reviewed +
Polymer reviewed +
Event reviewed +
RNADrug reviewed +
ReactionlikeEvent reviewed +
ProteinDrug reviewed +
Cell reviewed +
Depolymerisation reviewed +
Pathway reviewed +
PhysicalEntity reviewed +
Polymerisation reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
CellLineagePath reviewed +
CellDevelopmentStep reviewed +
Drug reviewed +
InteractionEvent reviewed +
ChemicalDrug reviewed +
OtherEntity reviewed +
BlackBoxEvent reviewed +
Complex reviewed +
GenomeEncodedEntity reviewed +
Reaction reviewed +
CellLineagePath edited +
DefinedSet edited +
Drug edited +
CellDevelopmentStep edited +
Polymerisation edited +
SimpleEntity edited +
EntityWithAccessionedSequence edited +
CandidateSet edited +
BlackBoxEvent edited +
GenomeEncodedEntity edited +
Complex edited +
Reaction edited +
ChemicalDrug edited +
InteractionEvent edited +
OtherEntity edited +
Polymer edited +
Event edited +
EntitySet edited +
FailedReaction edited +
Pathway edited +
PhysicalEntity edited +
ReactionlikeEvent edited +
RNADrug edited +
Cell edited +
ProteinDrug edited +
Depolymerisation edited +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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