Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
Reaction structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
Event structureModified +
Depolymerisation revised +
Drug revised +
DefinedSet revised +
ChemicalDrug revised +
CellDevelopmentStep revised +
PhysicalEntity revised +
Pathway revised +
EntitySet revised +
Cell revised +
EntityWithAccessionedSequence revised +
CandidateSet revised +
RNADrug revised +
Reaction revised +
FailedReaction revised +
InteractionEvent revised +
Complex revised +
CellLineagePath revised +
Event revised +
ReactionlikeEvent revised +
OtherEntity revised +
SimpleEntity revised +
Polymer revised +
BlackBoxEvent revised +
ProteinDrug revised +
GenomeEncodedEntity revised +
Polymerisation revised +
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
Person created 1
ReferenceGroup created 1
NonsenseMutation created 1
ExternalOntology created 1
PositiveGeneExpressionRegulation created 1
Species created 1
EntitySet created 1
RNADrug created 1
CandidateSet created 1
AbstractModifiedResidue created 1
ReferenceDNASequence created 1
ControlledVocabulary created 1
GO_CellularComponent created 1
RetractionStatus created 1
Affiliation created 1
StableIdentifier created 1
ReferenceGeneProduct created 1
Compartment created 1
Polymerisation created 1
Anatomy created 1
PsiMod created 1
Polymer created 1
DrugActionType created 1
ProteinDrug created 1
FragmentInsertionModification created 1
GO_BiologicalProcess created 1
Depolymerisation created 1
NegativePrecedingEvent created 1
ChemicalDrug created 1
URL created 1
DefinedSet created 1
Summation created 1
ModifiedNucleotide created 1
EntityFunctionalStatus created 1
Complex created 1
CatalystActivity created 1
NegativeRegulation created 1
_DeletedInstance created 1
MarkerReference created 1
Publication created 1
DeletedControlledVocabulary created 1
CrosslinkedResidue created 1
DatabaseObject created 1
SimpleEntity created 1
TranscriptionalModification created 1
GroupModifiedResidue created 1
Taxon created 1
ReviewStatus created 1
Regulation created 1
GenomeEncodedEntity created 1
FunctionalStatus created 1
FragmentDeletionModification created 1
Drug created 1
ReactionType created 1
Pathway created 1
Disease created 1
ModifiedResidue created 1
Figure created 1
CellDevelopmentStep created 1
Reaction created 1
FragmentModification created 1
FailedReaction created 1
FunctionalStatusType created 1
CellLineagePath created 1
ReferenceRNASequence created 1
StableIdentifierReleaseStatus created 1
_UpdateTracker created 1
PositiveRegulation created 1
Requirement created 1
Event created 1
OtherEntity created 1
LiteratureReference created 1
IntraChainCrosslinkedResidue created 1
ReplacedResidue created 1
DatabaseIdentifier created 1
TranslationalModification created 1
GO_MolecularFunction created 1
PhysicalEntityCellType created 1
Book created 1
StableIdentifierHistory created 1
_Release created 1
EntityWithAccessionedSequence created 1
ReferenceMolecule created 1
Cell created 1
GeneticallyModifiedResidue created 1
ReferenceDatabase created 1
_Deleted created 1
PhysicalEntity created 1
ReferenceIsoform created 1
InterChainCrosslinkedResidue created 1
PathwayDiagram created 1
InteractionEvent created 1
EvidenceType created 1
RegulationReference created 1
InstanceEdit created 1
CellType created 1
SequenceOntology created 1
ReferenceEntity created 1
NegativePrecedingEventReason created 1
FrontPage created 1
ReferenceTherapeutic created 1
ReactionlikeEvent created 1
NegativeGeneExpressionRegulation created 1
ControlReference created 1
FragmentReplacedModification created 1
CatalystActivityReference created 1
ReferenceSequence created 1
BlackBoxEvent created 1
_Deleted replacementInstances +
Event edited +
CellLineagePath edited +
BlackBoxEvent edited +
ProteinDrug edited +
Polymer edited +
GenomeEncodedEntity edited +
Polymerisation edited +
ReactionlikeEvent edited +
OtherEntity edited +
SimpleEntity edited +
DefinedSet edited +
ChemicalDrug edited +
Depolymerisation edited +
Drug edited +
CandidateSet edited +
Reaction edited +
FailedReaction edited +
InteractionEvent edited +
Complex edited +
RNADrug edited +
PhysicalEntity edited +
CellDevelopmentStep edited +
Cell edited +
EntityWithAccessionedSequence edited +
Pathway edited +
EntitySet edited +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
EntitySet reviewed +
PhysicalEntity reviewed +
CellDevelopmentStep reviewed +
InteractionEvent reviewed +
Reaction reviewed +
FailedReaction reviewed +
Complex reviewed +
RNADrug reviewed +
CandidateSet reviewed +
Depolymerisation reviewed +
Drug reviewed +
ChemicalDrug reviewed +
DefinedSet reviewed +
OtherEntity reviewed +
SimpleEntity reviewed +
ReactionlikeEvent reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
BlackBoxEvent reviewed +
ProteinDrug reviewed +
Polymer reviewed +
CellLineagePath reviewed +
Event reviewed +
CellDevelopmentStep authored +
PhysicalEntity authored 1
Pathway authored +
EntitySet authored 1
Cell authored 1
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
RNADrug authored 1
FailedReaction authored +
Reaction authored +
Complex authored 1
InteractionEvent authored +
Depolymerisation authored +
Drug authored 1
DefinedSet authored 1
ChemicalDrug authored 1
ReactionlikeEvent authored +
SimpleEntity authored 1
OtherEntity authored 1
Polymer authored 1
BlackBoxEvent authored +
ProteinDrug authored 1
Polymerisation authored +
GenomeEncodedEntity authored 1
CellLineagePath authored +
Event authored +
CrosslinkedResidue modified +
DatabaseObject modified +
MarkerReference modified +
Publication modified +
DeletedControlledVocabulary modified +
GenomeEncodedEntity modified +
Regulation modified +
FunctionalStatus modified +
FragmentDeletionModification modified +
SimpleEntity modified +
TranscriptionalModification modified +
GroupModifiedResidue modified +
ReviewStatus modified +
Taxon modified +
ChemicalDrug modified +
URL modified +
DefinedSet modified +
GO_BiologicalProcess modified +
Depolymerisation modified +
NegativePrecedingEvent modified +
CatalystActivity modified +
Complex modified +
NegativeRegulation modified +
_DeletedInstance modified +
Summation modified +
ModifiedNucleotide modified +
EntityFunctionalStatus modified +
RetractionStatus modified +
GO_CellularComponent modified +
Affiliation modified +
StableIdentifier modified +
AbstractModifiedResidue modified +
ReferenceDNASequence modified +
ControlledVocabulary modified +
Anatomy modified +
Polymerisation modified +
PsiMod modified +
Polymer modified +
DrugActionType modified +
ProteinDrug modified +
FragmentInsertionModification modified +
ReferenceGeneProduct modified +
Compartment modified +
PositiveGeneExpressionRegulation modified +
ReferenceGroup modified +
Person modified +
NonsenseMutation modified +
ExternalOntology modified +
RNADrug modified +
CandidateSet modified +
Species modified +
EntitySet modified +
ReferenceEntity modified +
NegativePrecedingEventReason modified +
InstanceEdit modified +
CellType modified +
SequenceOntology modified +
FragmentReplacedModification modified +
ControlReference modified +
CatalystActivityReference modified +
ReferenceSequence modified +
BlackBoxEvent modified +
FrontPage modified +
ReferenceTherapeutic modified +
ReactionlikeEvent modified +
NegativeGeneExpressionRegulation modified +
TranslationalModification modified +
GO_MolecularFunction modified +
PhysicalEntityCellType modified +
Book modified +
DatabaseIdentifier modified +
InterChainCrosslinkedResidue modified +
PathwayDiagram modified +
InteractionEvent modified +
EvidenceType modified +
RegulationReference modified +
StableIdentifierHistory modified +
ReferenceMolecule modified +
EntityWithAccessionedSequence modified +
_Release modified +
Cell modified +
ReferenceDatabase modified +
GeneticallyModifiedResidue modified +
PhysicalEntity modified +
_Deleted modified +
ReferenceIsoform modified +
_UpdateTracker modified +
PositiveRegulation modified +
Event modified +
Requirement modified +
CellLineagePath modified +
ReferenceRNASequence modified +
StableIdentifierReleaseStatus modified +
ReplacedResidue modified +
OtherEntity modified +
LiteratureReference modified +
IntraChainCrosslinkedResidue modified +
Drug modified +
ReactionType modified +
FailedReaction modified +
Reaction modified +
FragmentModification modified +
FunctionalStatusType modified +
Pathway modified +
Disease modified +
ModifiedResidue modified +
CellDevelopmentStep modified +
Figure modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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