Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InteractionEvent reviewed +
BlackBoxEvent reviewed +
GenomeEncodedEntity reviewed +
EntitySet reviewed +
Cell reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
ReactionlikeEvent reviewed +
Polymerisation reviewed +
SimpleEntity reviewed +
PhysicalEntity reviewed +
Reaction reviewed +
OtherEntity reviewed +
ChemicalDrug reviewed +
RNADrug reviewed +
Polymer reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
CandidateSet reviewed +
Drug reviewed +
ProteinDrug reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
Event reviewed +
Cell revised +
EntitySet revised +
Complex revised +
CellDevelopmentStep revised +
InteractionEvent revised +
GenomeEncodedEntity revised +
BlackBoxEvent revised +
SimpleEntity revised +
PhysicalEntity revised +
ReactionlikeEvent revised +
Polymerisation revised +
ChemicalDrug revised +
OtherEntity revised +
Reaction revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
RNADrug revised +
Pathway revised +
Polymer revised +
Drug revised +
CandidateSet revised +
DefinedSet revised +
ProteinDrug revised +
Depolymerisation revised +
Event revised +
FailedReaction revised +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
GenomeEncodedEntity edited +
BlackBoxEvent edited +
InteractionEvent edited +
Complex edited +
CellDevelopmentStep edited +
EntitySet edited +
Cell edited +
Polymerisation edited +
ReactionlikeEvent edited +
PhysicalEntity edited +
SimpleEntity edited +
OtherEntity edited +
ChemicalDrug edited +
Reaction edited +
Pathway edited +
Polymer edited +
RNADrug edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
CandidateSet edited +
Drug edited +
DefinedSet edited +
ProteinDrug edited +
Depolymerisation edited +
Event edited +
FailedReaction edited +
ChemicalDrug authored 1
OtherEntity authored 1
Reaction authored +
Polymer authored 1
Pathway authored +
RNADrug authored 1
CellLineagePath authored +
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
GenomeEncodedEntity authored 1
InteractionEvent authored +
Complex authored 1
CellDevelopmentStep authored +
EntitySet authored 1
Cell authored 1
Polymerisation authored +
ReactionlikeEvent authored +
SimpleEntity authored 1
PhysicalEntity authored 1
Depolymerisation authored +
Event authored +
FailedReaction authored +
CandidateSet authored 1
Drug authored 1
DefinedSet authored 1
ProteinDrug authored 1
InteractionEvent structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
Reaction structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Event structureModified +
Pathway structureModified +
CellLineagePath structureModified +
Cell created 1
MarkerReference created 1
Complex created 1
DeletedControlledVocabulary created 1
ReferenceDNASequence created 1
GenomeEncodedEntity created 1
StableIdentifierHistory created 1
ReactionlikeEvent created 1
DrugActionType created 1
_Release created 1
ReferenceSequence created 1
Reaction created 1
ChemicalDrug created 1
GO_MolecularFunction created 1
ControlledVocabulary created 1
RNADrug created 1
Polymer created 1
Drug created 1
AbstractModifiedResidue created 1
PhysicalEntityCellType created 1
DatabaseObject created 1
URL created 1
GeneticallyModifiedResidue created 1
Book created 1
ExternalOntology created 1
PsiMod created 1
PositiveGeneExpressionRegulation created 1
_Deleted created 1
FunctionalStatus created 1
IntraChainCrosslinkedResidue created 1
Compartment created 1
NonsenseMutation created 1
InstanceEdit created 1
Affiliation created 1
NegativePrecedingEventReason created 1
ReferenceRNASequence created 1
OtherEntity created 1
CellLineagePath created 1
FrontPage created 1
TranslationalModification created 1
ReferenceGeneProduct created 1
PositiveRegulation created 1
GroupModifiedResidue created 1
Publication created 1
CandidateSet created 1
_UpdateTracker created 1
ProteinDrug created 1
FunctionalStatusType created 1
DatabaseIdentifier created 1
ReferenceDatabase created 1
ModifiedResidue created 1
ReactionType created 1
Requirement created 1
CellType created 1
EntitySet created 1
StableIdentifierReleaseStatus created 1
EntityFunctionalStatus created 1
ReferenceMolecule created 1
TranscriptionalModification created 1
InteractionEvent created 1
PhysicalEntity created 1
StableIdentifier created 1
SimpleEntity created 1
PathwayDiagram created 1
ReferenceGroup created 1
Figure created 1
EntityWithAccessionedSequence created 1
CatalystActivity created 1
Pathway created 1
InterChainCrosslinkedResidue created 1
FragmentReplacedModification created 1
NegativeRegulation created 1
GO_CellularComponent created 1
Taxon created 1
Summation created 1
CatalystActivityReference created 1
ReplacedResidue created 1
NegativePrecedingEvent created 1
LiteratureReference created 1
FailedReaction created 1
CrosslinkedResidue created 1
FragmentInsertionModification created 1
CellDevelopmentStep created 1
Regulation created 1
ReferenceTherapeutic created 1
ControlReference created 1
GO_BiologicalProcess created 1
BlackBoxEvent created 1
ReferenceIsoform created 1
ModifiedNucleotide created 1
FragmentModification created 1
ReviewStatus created 1
Person created 1
Polymerisation created 1
Disease created 1
NegativeGeneExpressionRegulation created 1
FragmentDeletionModification created 1
Anatomy created 1
SequenceOntology created 1
DefinedSet created 1
Depolymerisation created 1
RetractionStatus created 1
Species created 1
_DeletedInstance created 1
ReferenceEntity created 1
EvidenceType created 1
RegulationReference created 1
Event created 1
_Deleted replacementInstances +
Anatomy modified +
FragmentDeletionModification modified +
NegativeGeneExpressionRegulation modified +
Polymerisation modified +
Disease modified +
ReviewStatus modified +
Person modified +
FragmentModification modified +
ReferenceIsoform modified +
ModifiedNucleotide modified +
BlackBoxEvent modified +
GO_BiologicalProcess modified +
ReferenceTherapeutic modified +
ControlReference modified +
CellDevelopmentStep modified +
Regulation modified +
FragmentInsertionModification modified +
RegulationReference modified +
Event modified +
EvidenceType modified +
ReferenceEntity modified +
_DeletedInstance modified +
Species modified +
Depolymerisation modified +
RetractionStatus modified +
DefinedSet modified +
SequenceOntology modified +
Pathway modified +
CatalystActivity modified +
EntityWithAccessionedSequence modified +
Figure modified +
ReferenceGroup modified +
PathwayDiagram modified +
StableIdentifier modified +
PhysicalEntity modified +
SimpleEntity modified +
InteractionEvent modified +
TranscriptionalModification modified +
ReferenceMolecule modified +
StableIdentifierReleaseStatus modified +
EntityFunctionalStatus modified +
EntitySet modified +
CrosslinkedResidue modified +
FailedReaction modified +
LiteratureReference modified +
NegativePrecedingEvent modified +
ReplacedResidue modified +
CatalystActivityReference modified +
Summation modified +
Taxon modified +
GO_CellularComponent modified +
NegativeRegulation modified +
FragmentReplacedModification modified +
InterChainCrosslinkedResidue modified +
ReferenceGeneProduct modified +
TranslationalModification modified +
PositiveRegulation modified +
FrontPage modified +
CellLineagePath modified +
OtherEntity modified +
NegativePrecedingEventReason modified +
ReferenceRNASequence modified +
Affiliation modified +
InstanceEdit modified +
NonsenseMutation modified +
Compartment modified +
IntraChainCrosslinkedResidue modified +
FunctionalStatus modified +
PositiveGeneExpressionRegulation modified +
_Deleted modified +
ExternalOntology modified +
PsiMod modified +
CellType modified +
Requirement modified +
ModifiedResidue modified +
ReactionType modified +
ReferenceDatabase modified +
DatabaseIdentifier modified +
FunctionalStatusType modified +
ProteinDrug modified +
_UpdateTracker modified +
CandidateSet modified +
Publication modified +
GroupModifiedResidue modified +
Polymer modified +
RNADrug modified +
GO_MolecularFunction modified +
ControlledVocabulary modified +
ChemicalDrug modified +
Reaction modified +
ReferenceSequence modified +
_Release modified +
DrugActionType modified +
ReactionlikeEvent modified +
StableIdentifierHistory modified +
GenomeEncodedEntity modified +
ReferenceDNASequence modified +
DeletedControlledVocabulary modified +
Complex modified +
MarkerReference modified +
Cell modified +
Book modified +
GeneticallyModifiedResidue modified +
URL modified +
AbstractModifiedResidue modified +
PhysicalEntityCellType modified +
DatabaseObject modified +
Drug modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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