Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
FragmentModification created 1
Species created 1
Compartment created 1
ReferenceDatabase created 1
ReplacedResidue created 1
PhysicalEntity created 1
ReferenceDNASequence created 1
CrosslinkedResidue created 1
NegativeGeneExpressionRegulation created 1
DeletedControlledVocabulary created 1
ProteinDrug created 1
FunctionalStatus created 1
Pathway created 1
FragmentReplacedModification created 1
URL created 1
AbstractModifiedResidue created 1
Complex created 1
RetractionStatus created 1
CellType created 1
DrugActionType created 1
ChemicalDrug created 1
InteractionEvent created 1
Polymerisation created 1
ModifiedNucleotide created 1
FragmentInsertionModification created 1
FunctionalStatusType created 1
ReactionType created 1
ReferenceIsoform created 1
MarkerReference created 1
CellLineagePath created 1
FrontPage created 1
Publication created 1
NonsenseMutation created 1
ReferenceGeneProduct created 1
EntityWithAccessionedSequence created 1
StableIdentifierHistory created 1
NegativeRegulation created 1
SequenceOntology created 1
Disease created 1
NegativePrecedingEvent created 1
LiteratureReference created 1
ReferenceSequence created 1
Regulation created 1
Drug created 1
TranscriptionalModification created 1
EntityFunctionalStatus created 1
CandidateSet created 1
Book created 1
Requirement created 1
ReferenceRNASequence created 1
DatabaseObject created 1
Reaction created 1
_Deleted created 1
PhysicalEntityCellType created 1
DatabaseIdentifier created 1
TranslationalModification created 1
Cell created 1
CatalystActivity created 1
PathwayDiagram created 1
Person created 1
_Release created 1
InterChainCrosslinkedResidue created 1
ReferenceEntity created 1
Anatomy created 1
GO_CellularComponent created 1
Depolymerisation created 1
FailedReaction created 1
DefinedSet created 1
GroupModifiedResidue created 1
CellDevelopmentStep created 1
StableIdentifierReleaseStatus created 1
Affiliation created 1
ReferenceGroup created 1
ModifiedResidue created 1
SimpleEntity created 1
GenomeEncodedEntity created 1
Event created 1
ControlledVocabulary created 1
ControlReference created 1
Summation created 1
PsiMod created 1
ExternalOntology created 1
PositiveGeneExpressionRegulation created 1
IntraChainCrosslinkedResidue created 1
ReferenceTherapeutic created 1
NegativePrecedingEventReason created 1
EvidenceType created 1
StableIdentifier created 1
Figure created 1
RNADrug created 1
GeneticallyModifiedResidue created 1
GO_BiologicalProcess created 1
Taxon created 1
InstanceEdit created 1
ReviewStatus created 1
_UpdateTracker created 1
Polymer created 1
GO_MolecularFunction created 1
EntitySet created 1
PositiveRegulation created 1
FragmentDeletionModification created 1
ReferenceMolecule created 1
BlackBoxEvent created 1
_DeletedInstance created 1
RegulationReference created 1
OtherEntity created 1
ReactionlikeEvent created 1
CatalystActivityReference created 1
BlackBoxEvent internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
CellDevelopmentStep reviewed +
Pathway reviewed +
FailedReaction reviewed +
DefinedSet reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
ChemicalDrug reviewed +
InteractionEvent reviewed +
OtherEntity reviewed +
SimpleEntity reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
Reaction reviewed +
Cell reviewed +
RNADrug reviewed +
CellLineagePath reviewed +
ProteinDrug reviewed +
Depolymerisation reviewed +
EntitySet reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
EntityWithAccessionedSequence reviewed +
Reaction revised +
Cell revised +
RNADrug revised +
CellLineagePath revised +
Depolymerisation revised +
ProteinDrug revised +
EntitySet revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
Polymer revised +
CellDevelopmentStep revised +
Pathway revised +
FailedReaction revised +
DefinedSet revised +
Complex revised +
BlackBoxEvent revised +
GenomeEncodedEntity revised +
Event revised +
Polymerisation revised +
ChemicalDrug revised +
InteractionEvent revised +
SimpleEntity revised +
OtherEntity revised +
Drug revised +
ReactionlikeEvent revised +
CandidateSet revised +
Polymerisation structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent modified +
CatalystActivityReference modified +
OtherEntity modified +
RegulationReference modified +
_DeletedInstance modified +
BlackBoxEvent modified +
ReferenceMolecule modified +
PositiveRegulation modified +
FragmentDeletionModification modified +
EntitySet modified +
Polymer modified +
GO_MolecularFunction modified +
ReviewStatus modified +
_UpdateTracker modified +
InstanceEdit modified +
Taxon modified +
GeneticallyModifiedResidue modified +
GO_BiologicalProcess modified +
RNADrug modified +
Figure modified +
StableIdentifier modified +
NegativePrecedingEventReason modified +
EvidenceType modified +
ReferenceTherapeutic modified +
IntraChainCrosslinkedResidue modified +
PositiveGeneExpressionRegulation modified +
ExternalOntology modified +
PsiMod modified +
Summation modified +
ControlReference modified +
ControlledVocabulary modified +
GenomeEncodedEntity modified +
Event modified +
SimpleEntity modified +
ModifiedResidue modified +
ReferenceGroup modified +
Affiliation modified +
CellDevelopmentStep modified +
StableIdentifierReleaseStatus modified +
GroupModifiedResidue modified +
DefinedSet modified +
FailedReaction modified +
Depolymerisation modified +
GO_CellularComponent modified +
ReferenceEntity modified +
Anatomy modified +
InterChainCrosslinkedResidue modified +
_Release modified +
Person modified +
PathwayDiagram modified +
CatalystActivity modified +
Cell modified +
PhysicalEntityCellType modified +
DatabaseIdentifier modified +
_Deleted modified +
TranslationalModification modified +
DatabaseObject modified +
Reaction modified +
ReferenceRNASequence modified +
Requirement modified +
Book modified +
TranscriptionalModification modified +
Drug modified +
EntityFunctionalStatus modified +
CandidateSet modified +
Regulation modified +
ReferenceSequence modified +
LiteratureReference modified +
NegativePrecedingEvent modified +
Disease modified +
SequenceOntology modified +
NegativeRegulation modified +
StableIdentifierHistory modified +
EntityWithAccessionedSequence modified +
ReferenceGeneProduct modified +
NonsenseMutation modified +
FrontPage modified +
Publication modified +
CellLineagePath modified +
MarkerReference modified +
ReferenceIsoform modified +
ReactionType modified +
FragmentInsertionModification modified +
FunctionalStatusType modified +
ModifiedNucleotide modified +
Polymerisation modified +
InteractionEvent modified +
ChemicalDrug modified +
DrugActionType modified +
CellType modified +
RetractionStatus modified +
Complex modified +
Pathway modified +
FragmentReplacedModification modified +
AbstractModifiedResidue modified +
URL modified +
FunctionalStatus modified +
ProteinDrug modified +
NegativeGeneExpressionRegulation modified +
DeletedControlledVocabulary modified +
ReferenceDNASequence modified +
CrosslinkedResidue modified +
PhysicalEntity modified +
ReplacedResidue modified +
ReferenceDatabase modified +
Compartment modified +
FragmentModification modified +
Species modified +
Polymer edited +
EntityWithAccessionedSequence edited +
PhysicalEntity edited +
ProteinDrug edited +
Depolymerisation edited +
EntitySet edited +
CellLineagePath edited +
RNADrug edited +
Cell edited +
Reaction edited +
CandidateSet edited +
Drug edited +
ReactionlikeEvent edited +
InteractionEvent edited +
ChemicalDrug edited +
OtherEntity edited +
SimpleEntity edited +
Polymerisation edited +
GenomeEncodedEntity edited +
Event edited +
BlackBoxEvent edited +
Complex edited +
DefinedSet edited +
FailedReaction edited +
CellDevelopmentStep edited +
Pathway edited +
Event authored +
GenomeEncodedEntity authored 1
Polymerisation authored +
ChemicalDrug authored 1
InteractionEvent authored +
OtherEntity authored 1
SimpleEntity authored 1
Drug authored 1
CandidateSet authored 1
ReactionlikeEvent authored +
Pathway authored +
CellDevelopmentStep authored +
FailedReaction authored +
DefinedSet authored 1
Complex authored 1
BlackBoxEvent authored +
CellLineagePath authored +
ProteinDrug authored 1
EntitySet authored 1
Depolymerisation authored +
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
Polymer authored 1
Reaction authored +
RNADrug authored 1
Cell authored 1
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

Follow Reactome