Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Event structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
Reaction structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
BlackBoxEvent structureModified +
Polymer edited +
CellLineagePath edited +
ProteinDrug edited +
Event edited +
RNADrug edited +
FailedReaction edited +
InteractionEvent edited +
DefinedSet edited +
Pathway edited +
ChemicalDrug edited +
Cell edited +
GenomeEncodedEntity edited +
EntityWithAccessionedSequence edited +
Polymerisation edited +
Complex edited +
EntitySet edited +
SimpleEntity edited +
ReactionlikeEvent edited +
Depolymerisation edited +
Drug edited +
PhysicalEntity edited +
BlackBoxEvent edited +
CandidateSet edited +
CellDevelopmentStep edited +
OtherEntity edited +
Reaction edited +
ProteinDrug revised +
Event revised +
CellLineagePath revised +
Polymer revised +
Cell revised +
ChemicalDrug revised +
Pathway revised +
Complex revised +
Polymerisation revised +
EntityWithAccessionedSequence revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
DefinedSet revised +
RNADrug revised +
FailedReaction revised +
EntitySet revised +
Drug revised +
PhysicalEntity revised +
SimpleEntity revised +
Depolymerisation revised +
ReactionlikeEvent revised +
OtherEntity revised +
CellDevelopmentStep revised +
Reaction revised +
CandidateSet revised +
BlackBoxEvent revised +
InteractionEvent internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
InstanceEdit modified +
ReplacedResidue modified +
_DeletedInstance modified +
Drug modified +
ReactionType modified +
GO_CellularComponent modified +
PositiveRegulation modified +
OtherEntity modified +
InterChainCrosslinkedResidue modified +
TranscriptionalModification modified +
Reaction modified +
CandidateSet modified +
_Release modified +
TranslationalModification modified +
IntraChainCrosslinkedResidue modified +
ProteinDrug modified +
CellLineagePath modified +
DrugActionType modified +
ModifiedNucleotide modified +
Cell modified +
FragmentModification modified +
LiteratureReference modified +
FailedReaction modified +
GO_BiologicalProcess modified +
AbstractModifiedResidue modified +
_Deleted modified +
GeneticallyModifiedResidue modified +
GO_MolecularFunction modified +
Taxon modified +
Species modified +
ModifiedResidue modified +
CatalystActivity modified +
RetractionStatus modified +
FragmentInsertionModification modified +
Publication modified +
StableIdentifierReleaseStatus modified +
BlackBoxEvent modified +
Regulation modified +
DatabaseObject modified +
ReferenceDNASequence modified +
FragmentReplacedModification modified +
Pathway modified +
NonsenseMutation modified +
EntityWithAccessionedSequence modified +
EvidenceType modified +
GenomeEncodedEntity modified +
ReferenceGroup modified +
StableIdentifier modified +
NegativePrecedingEventReason modified +
GroupModifiedResidue modified +
EntitySet modified +
PositiveGeneExpressionRegulation modified +
PhysicalEntity modified +
ReferenceDatabase modified +
Depolymerisation modified +
MarkerReference modified +
Anatomy modified +
PsiMod modified +
ControlReference modified +
ReferenceEntity modified +
FunctionalStatus modified +
Affiliation modified +
_UpdateTracker modified +
URL modified +
ReferenceIsoform modified +
ControlledVocabulary modified +
DatabaseIdentifier modified +
ReviewStatus modified +
PathwayDiagram modified +
NegativePrecedingEvent modified +
FunctionalStatusType modified +
Requirement modified +
Compartment modified +
NegativeRegulation modified +
ReferenceGeneProduct modified +
Summation modified +
PhysicalEntityCellType modified +
Person modified +
InteractionEvent modified +
FragmentDeletionModification modified +
ExternalOntology modified +
CrosslinkedResidue modified +
NegativeGeneExpressionRegulation modified +
SimpleEntity modified +
ReactionlikeEvent modified +
DeletedControlledVocabulary modified +
ReferenceRNASequence modified +
ReferenceSequence modified +
CellDevelopmentStep modified +
RegulationReference modified +
SequenceOntology modified +
Figure modified +
CellType modified +
Event modified +
Disease modified +
Polymer modified +
StableIdentifierHistory modified +
FrontPage modified +
ChemicalDrug modified +
ReferenceTherapeutic modified +
Complex modified +
Polymerisation modified +
ReferenceMolecule modified +
CatalystActivityReference modified +
DefinedSet modified +
RNADrug modified +
EntityFunctionalStatus modified +
Book modified +
CandidateSet created 1
_Release created 1
TranscriptionalModification created 1
Reaction created 1
OtherEntity created 1
InterChainCrosslinkedResidue created 1
PositiveRegulation created 1
GO_CellularComponent created 1
ReactionType created 1
Drug created 1
_DeletedInstance created 1
ReplacedResidue created 1
InstanceEdit created 1
GO_BiologicalProcess created 1
LiteratureReference created 1
FragmentModification created 1
FailedReaction created 1
DrugActionType created 1
ModifiedNucleotide created 1
Cell created 1
CellLineagePath created 1
IntraChainCrosslinkedResidue created 1
TranslationalModification created 1
ProteinDrug created 1
BlackBoxEvent created 1
Publication created 1
StableIdentifierReleaseStatus created 1
CatalystActivity created 1
RetractionStatus created 1
FragmentInsertionModification created 1
ModifiedResidue created 1
Species created 1
Taxon created 1
GeneticallyModifiedResidue created 1
GO_MolecularFunction created 1
AbstractModifiedResidue created 1
_Deleted created 1
NegativePrecedingEventReason created 1
ReferenceGroup created 1
StableIdentifier created 1
NonsenseMutation created 1
EntityWithAccessionedSequence created 1
EvidenceType created 1
GenomeEncodedEntity created 1
FragmentReplacedModification created 1
Pathway created 1
ReferenceDNASequence created 1
DatabaseObject created 1
Regulation created 1
DatabaseIdentifier created 1
ReviewStatus created 1
FunctionalStatus created 1
_UpdateTracker created 1
Affiliation created 1
ControlledVocabulary created 1
ReferenceIsoform created 1
URL created 1
ControlReference created 1
ReferenceEntity created 1
Anatomy created 1
PsiMod created 1
MarkerReference created 1
PhysicalEntity created 1
PositiveGeneExpressionRegulation created 1
ReferenceDatabase created 1
Depolymerisation created 1
GroupModifiedResidue created 1
EntitySet created 1
Person created 1
FragmentDeletionModification created 1
InteractionEvent created 1
ExternalOntology created 1
PhysicalEntityCellType created 1
ReferenceGeneProduct created 1
NegativeRegulation created 1
Summation created 1
Requirement created 1
Compartment created 1
NegativePrecedingEvent created 1
FunctionalStatusType created 1
PathwayDiagram created 1
Figure created 1
RegulationReference created 1
SequenceOntology created 1
CellDevelopmentStep created 1
ReferenceSequence created 1
DeletedControlledVocabulary created 1
ReferenceRNASequence created 1
NegativeGeneExpressionRegulation created 1
ReactionlikeEvent created 1
SimpleEntity created 1
CrosslinkedResidue created 1
EntityFunctionalStatus created 1
Book created 1
DefinedSet created 1
CatalystActivityReference created 1
RNADrug created 1
Complex created 1
ReferenceTherapeutic created 1
Polymerisation created 1
ReferenceMolecule created 1
FrontPage created 1
ChemicalDrug created 1
Disease created 1
Polymer created 1
StableIdentifierHistory created 1
Event created 1
CellType created 1
Cell authored 1
ChemicalDrug authored 1
Pathway authored +
Complex authored 1
Polymerisation authored +
EntityWithAccessionedSequence authored 1
GenomeEncodedEntity authored 1
DefinedSet authored 1
InteractionEvent authored +
RNADrug authored 1
FailedReaction authored +
ProteinDrug authored 1
Event authored +
CellLineagePath authored +
Polymer authored 1
OtherEntity authored 1
CellDevelopmentStep authored +
Reaction authored +
BlackBoxEvent authored +
CandidateSet authored 1
EntitySet authored 1
PhysicalEntity authored 1
Drug authored 1
Depolymerisation authored +
SimpleEntity authored 1
ReactionlikeEvent authored +
_Deleted replacementInstances +
CandidateSet reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
OtherEntity reviewed +
Reaction reviewed +
EntitySet reviewed +
SimpleEntity reviewed +
ReactionlikeEvent reviewed +
Depolymerisation reviewed +
PhysicalEntity reviewed +
Drug reviewed +
FailedReaction reviewed +
RNADrug reviewed +
InteractionEvent reviewed +
DefinedSet reviewed +
Pathway reviewed +
ChemicalDrug reviewed +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
Complex reviewed +
Polymer reviewed +
CellLineagePath reviewed +
ProteinDrug reviewed +
Event reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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