Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
Drug revised +
Pathway revised +
Polymerisation revised +
CandidateSet revised +
CellLineagePath revised +
PhysicalEntity revised +
Complex revised +
GenomeEncodedEntity revised +
Event revised +
FailedReaction revised +
Reaction revised +
Depolymerisation revised +
CellDevelopmentStep revised +
Cell revised +
SimpleEntity revised +
EntityWithAccessionedSequence revised +
DefinedSet revised +
BlackBoxEvent revised +
ReactionlikeEvent revised +
EntitySet revised +
ChemicalDrug revised +
ProteinDrug revised +
OtherEntity revised +
RNADrug revised +
InteractionEvent revised +
Polymer revised +
ReferenceEntity created 1
NegativePrecedingEventReason created 1
MarkerReference created 1
Publication created 1
RetractionStatus created 1
ControlReference created 1
ReferenceIsoform created 1
Depolymerisation created 1
InstanceEdit created 1
FrontPage created 1
ReferenceMolecule created 1
ModifiedResidue created 1
ReactionlikeEvent created 1
CellType created 1
GO_MolecularFunction created 1
PathwayDiagram created 1
NonsenseMutation created 1
NegativePrecedingEvent created 1
DefinedSet created 1
ControlledVocabulary created 1
NegativeRegulation created 1
GO_BiologicalProcess created 1
PsiMod created 1
OtherEntity created 1
ReferenceGroup created 1
FunctionalStatusType created 1
IntraChainCrosslinkedResidue created 1
CatalystActivityReference created 1
PhysicalEntity created 1
EntityFunctionalStatus created 1
Anatomy created 1
EvidenceType created 1
Requirement created 1
Species created 1
ReviewStatus created 1
ReactionType created 1
Person created 1
Regulation created 1
PositiveGeneExpressionRegulation created 1
CellDevelopmentStep created 1
Event created 1
FragmentReplacedModification created 1
ReferenceDatabase created 1
TranslationalModification created 1
PhysicalEntityCellType created 1
DrugActionType created 1
DatabaseIdentifier created 1
Book created 1
Affiliation created 1
Polymer created 1
GO_CellularComponent created 1
_UpdateTracker created 1
Disease created 1
CatalystActivity created 1
Summation created 1
Complex created 1
_DeletedInstance created 1
ReferenceSequence created 1
Polymerisation created 1
_Release created 1
Drug created 1
FragmentModification created 1
StableIdentifier created 1
ReferenceGeneProduct created 1
PositiveRegulation created 1
AbstractModifiedResidue created 1
FailedReaction created 1
BlackBoxEvent created 1
FragmentInsertionModification created 1
Figure created 1
RegulationReference created 1
SimpleEntity created 1
SequenceOntology created 1
InteractionEvent created 1
ModifiedNucleotide created 1
FunctionalStatus created 1
InterChainCrosslinkedResidue created 1
ReplacedResidue created 1
NegativeGeneExpressionRegulation created 1
ExternalOntology created 1
ProteinDrug created 1
DeletedControlledVocabulary created 1
CandidateSet created 1
CellLineagePath created 1
CrosslinkedResidue created 1
StableIdentifierHistory created 1
FragmentDeletionModification created 1
Pathway created 1
StableIdentifierReleaseStatus created 1
Cell created 1
ReferenceTherapeutic created 1
Taxon created 1
Reaction created 1
GenomeEncodedEntity created 1
EntitySet created 1
EntityWithAccessionedSequence created 1
Compartment created 1
GroupModifiedResidue created 1
LiteratureReference created 1
ReferenceDNASequence created 1
DatabaseObject created 1
_Deleted created 1
GeneticallyModifiedResidue created 1
RNADrug created 1
ReferenceRNASequence created 1
TranscriptionalModification created 1
URL created 1
ChemicalDrug created 1
_Deleted replacementInstances +
ProteinDrug reviewed +
ChemicalDrug reviewed +
RNADrug reviewed +
InteractionEvent reviewed +
Polymer reviewed +
OtherEntity reviewed +
SimpleEntity reviewed +
ReactionlikeEvent reviewed +
EntitySet reviewed +
BlackBoxEvent reviewed +
EntityWithAccessionedSequence reviewed +
DefinedSet reviewed +
FailedReaction reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
Reaction reviewed +
Cell reviewed +
Depolymerisation reviewed +
CellDevelopmentStep reviewed +
Pathway reviewed +
Polymerisation reviewed +
Drug reviewed +
CandidateSet reviewed +
PhysicalEntity reviewed +
Complex reviewed +
CellLineagePath reviewed +
CellDevelopmentStep authored +
Depolymerisation authored +
Cell authored 1
Reaction authored +
Event authored +
FailedReaction authored +
GenomeEncodedEntity authored 1
Complex authored 1
PhysicalEntity authored 1
CellLineagePath authored +
CandidateSet authored 1
Drug authored 1
Pathway authored +
Polymerisation authored +
OtherEntity authored 1
Polymer authored 1
InteractionEvent authored +
RNADrug authored 1
ChemicalDrug authored 1
ProteinDrug authored 1
DefinedSet authored 1
EntityWithAccessionedSequence authored 1
ReactionlikeEvent authored +
EntitySet authored 1
BlackBoxEvent authored +
SimpleEntity authored 1
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
Event structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Polymerisation structureModified +
ChemicalDrug modified +
URL modified +
TranscriptionalModification modified +
ReferenceRNASequence modified +
GeneticallyModifiedResidue modified +
RNADrug modified +
_Deleted modified +
DatabaseObject modified +
ReferenceDNASequence modified +
LiteratureReference modified +
Compartment modified +
GroupModifiedResidue modified +
EntityWithAccessionedSequence modified +
EntitySet modified +
Reaction modified +
GenomeEncodedEntity modified +
Taxon modified +
ReferenceTherapeutic modified +
Cell modified +
StableIdentifierReleaseStatus modified +
Pathway modified +
FragmentDeletionModification modified +
CrosslinkedResidue modified +
StableIdentifierHistory modified +
CellLineagePath modified +
CandidateSet modified +
DeletedControlledVocabulary modified +
ProteinDrug modified +
ExternalOntology modified +
ReplacedResidue modified +
InterChainCrosslinkedResidue modified +
NegativeGeneExpressionRegulation modified +
ModifiedNucleotide modified +
FunctionalStatus modified +
InteractionEvent modified +
SequenceOntology modified +
RegulationReference modified +
SimpleEntity modified +
FragmentInsertionModification modified +
Figure modified +
BlackBoxEvent modified +
AbstractModifiedResidue modified +
FailedReaction modified +
PositiveRegulation modified +
ReferenceGeneProduct modified +
StableIdentifier modified +
FragmentModification modified +
Drug modified +
_Release modified +
Polymerisation modified +
ReferenceSequence modified +
_DeletedInstance modified +
Complex modified +
Summation modified +
CatalystActivity modified +
Disease modified +
_UpdateTracker modified +
Polymer modified +
Affiliation modified +
GO_CellularComponent modified +
Book modified +
DatabaseIdentifier modified +
DrugActionType modified +
PhysicalEntityCellType modified +
TranslationalModification modified +
ReferenceDatabase modified +
FragmentReplacedModification modified +
Event modified +
CellDevelopmentStep modified +
PositiveGeneExpressionRegulation modified +
Regulation modified +
ReactionType modified +
Person modified +
Requirement modified +
Anatomy modified +
Species modified +
ReviewStatus modified +
EvidenceType modified +
EntityFunctionalStatus modified +
PhysicalEntity modified +
CatalystActivityReference modified +
IntraChainCrosslinkedResidue modified +
FunctionalStatusType modified +
ReferenceGroup modified +
OtherEntity modified +
PsiMod modified +
GO_BiologicalProcess modified +
NegativeRegulation modified +
ControlledVocabulary modified +
DefinedSet modified +
NonsenseMutation modified +
NegativePrecedingEvent modified +
GO_MolecularFunction modified +
PathwayDiagram modified +
ReactionlikeEvent modified +
CellType modified +
ModifiedResidue modified +
ReferenceMolecule modified +
FrontPage modified +
Depolymerisation modified +
InstanceEdit modified +
ReferenceIsoform modified +
ControlReference modified +
Publication modified +
RetractionStatus modified +
MarkerReference modified +
NegativePrecedingEventReason modified +
ReferenceEntity modified +
Drug edited +
Polymerisation edited +
Pathway edited +
PhysicalEntity edited +
Complex edited +
CellLineagePath edited +
CandidateSet edited +
Event edited +
FailedReaction edited +
Reaction edited +
GenomeEncodedEntity edited +
CellDevelopmentStep edited +
Depolymerisation edited +
Cell edited +
SimpleEntity edited +
DefinedSet edited +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
EntitySet edited +
BlackBoxEvent edited +
ProteinDrug edited +
ChemicalDrug edited +
OtherEntity edited +
InteractionEvent edited +
Polymer edited +
RNADrug edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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