Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Reaction revised +
PhysicalEntity revised +
Pathway revised +
ReactionlikeEvent revised +
Drug revised +
BlackBoxEvent revised +
EntitySet revised +
CellDevelopmentStep revised +
EntityWithAccessionedSequence revised +
Complex revised +
InteractionEvent revised +
CandidateSet revised +
Depolymerisation revised +
ChemicalDrug revised +
Event revised +
FailedReaction revised +
GenomeEncodedEntity revised +
DefinedSet revised +
CellLineagePath revised +
Cell revised +
OtherEntity revised +
ProteinDrug revised +
SimpleEntity revised +
Polymer revised +
RNADrug revised +
Polymerisation revised +
_Deleted replacementInstances +
Event structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Pathway structureModified +
FailedReaction structureModified +
Reaction structureModified +
CandidateSet edited +
Depolymerisation edited +
ChemicalDrug edited +
Event edited +
EntityWithAccessionedSequence edited +
Complex edited +
InteractionEvent edited +
EntitySet edited +
BlackBoxEvent edited +
CellDevelopmentStep edited +
Reaction edited +
PhysicalEntity edited +
Pathway edited +
ReactionlikeEvent edited +
Drug edited +
Polymerisation edited +
RNADrug edited +
Polymer edited +
Cell edited +
OtherEntity edited +
ProteinDrug edited +
SimpleEntity edited +
FailedReaction edited +
DefinedSet edited +
GenomeEncodedEntity edited +
CellLineagePath edited +
_Deleted created 1
Disease created 1
FunctionalStatus created 1
InstanceEdit created 1
CatalystActivity created 1
ReferenceGroup created 1
Requirement created 1
Pathway created 1
Taxon created 1
Summation created 1
TranscriptionalModification created 1
StableIdentifierHistory created 1
SequenceOntology created 1
DatabaseIdentifier created 1
NegativeGeneExpressionRegulation created 1
ReferenceTherapeutic created 1
GO_BiologicalProcess created 1
ProteinDrug created 1
NegativePrecedingEvent created 1
SimpleEntity created 1
PsiMod created 1
CellType created 1
Cell created 1
MarkerReference created 1
EntityFunctionalStatus created 1
CrosslinkedResidue created 1
Affiliation created 1
Anatomy created 1
FragmentModification created 1
GO_MolecularFunction created 1
ReferenceEntity created 1
AbstractModifiedResidue created 1
Book created 1
GeneticallyModifiedResidue created 1
GroupModifiedResidue created 1
NegativePrecedingEventReason created 1
EntitySet created 1
RetractionStatus created 1
ModifiedNucleotide created 1
ControlledVocabulary created 1
ReferenceRNASequence created 1
Species created 1
Depolymerisation created 1
Event created 1
Compartment created 1
DrugActionType created 1
ReactionType created 1
EntityWithAccessionedSequence created 1
Person created 1
ModifiedResidue created 1
FragmentReplacedModification created 1
_Release created 1
GenomeEncodedEntity created 1
DefinedSet created 1
NegativeRegulation created 1
PositiveRegulation created 1
ReferenceSequence created 1
FragmentDeletionModification created 1
ReviewStatus created 1
CellDevelopmentStep created 1
IntraChainCrosslinkedResidue created 1
Figure created 1
ReferenceMolecule created 1
BlackBoxEvent created 1
FragmentInsertionModification created 1
ReferenceIsoform created 1
Drug created 1
NonsenseMutation created 1
ChemicalDrug created 1
Publication created 1
CandidateSet created 1
_DeletedInstance created 1
Complex created 1
ControlReference created 1
PositiveGeneExpressionRegulation created 1
Regulation created 1
RegulationReference created 1
_UpdateTracker created 1
StableIdentifierReleaseStatus created 1
URL created 1
GO_CellularComponent created 1
ReferenceDatabase created 1
StableIdentifier created 1
FrontPage created 1
ReactionlikeEvent created 1
ReferenceDNASequence created 1
Reaction created 1
PhysicalEntity created 1
PathwayDiagram created 1
LiteratureReference created 1
ReplacedResidue created 1
InteractionEvent created 1
DatabaseObject created 1
ReferenceGeneProduct created 1
OtherEntity created 1
TranslationalModification created 1
CellLineagePath created 1
FailedReaction created 1
DeletedControlledVocabulary created 1
FunctionalStatusType created 1
Polymerisation created 1
ExternalOntology created 1
InterChainCrosslinkedResidue created 1
Polymer created 1
EvidenceType created 1
RNADrug created 1
CatalystActivityReference created 1
FragmentDeletionModification modified +
ReferenceSequence modified +
PositiveRegulation modified +
NegativeRegulation modified +
GenomeEncodedEntity modified +
DefinedSet modified +
_Release modified +
FragmentReplacedModification modified +
ModifiedResidue modified +
Person modified +
EntityWithAccessionedSequence modified +
ReactionType modified +
DrugActionType modified +
Compartment modified +
Event modified +
Species modified +
Depolymerisation modified +
ReferenceRNASequence modified +
ControlledVocabulary modified +
ModifiedNucleotide modified +
RetractionStatus modified +
NegativePrecedingEventReason modified +
EntitySet modified +
GroupModifiedResidue modified +
GeneticallyModifiedResidue modified +
Book modified +
ReferenceEntity modified +
AbstractModifiedResidue modified +
Anatomy modified +
GO_MolecularFunction modified +
FragmentModification modified +
Affiliation modified +
EntityFunctionalStatus modified +
CrosslinkedResidue modified +
Cell modified +
MarkerReference modified +
CellType modified +
SimpleEntity modified +
PsiMod modified +
NegativeGeneExpressionRegulation modified +
ReferenceTherapeutic modified +
ProteinDrug modified +
GO_BiologicalProcess modified +
NegativePrecedingEvent modified +
DatabaseIdentifier modified +
SequenceOntology modified +
StableIdentifierHistory modified +
Summation modified +
TranscriptionalModification modified +
Taxon modified +
Requirement modified +
Pathway modified +
ReferenceGroup modified +
CatalystActivity modified +
InstanceEdit modified +
FunctionalStatus modified +
Disease modified +
_Deleted modified +
CatalystActivityReference modified +
Polymer modified +
RNADrug modified +
EvidenceType modified +
InterChainCrosslinkedResidue modified +
ExternalOntology modified +
Polymerisation modified +
FunctionalStatusType modified +
DeletedControlledVocabulary modified +
FailedReaction modified +
CellLineagePath modified +
TranslationalModification modified +
OtherEntity modified +
ReferenceGeneProduct modified +
DatabaseObject modified +
InteractionEvent modified +
ReplacedResidue modified +
LiteratureReference modified +
PathwayDiagram modified +
ReferenceDNASequence modified +
Reaction modified +
PhysicalEntity modified +
ReactionlikeEvent modified +
FrontPage modified +
StableIdentifier modified +
ReferenceDatabase modified +
GO_CellularComponent modified +
URL modified +
StableIdentifierReleaseStatus modified +
_UpdateTracker modified +
RegulationReference modified +
Regulation modified +
PositiveGeneExpressionRegulation modified +
ControlReference modified +
Complex modified +
_DeletedInstance modified +
CandidateSet modified +
Publication modified +
ChemicalDrug modified +
NonsenseMutation modified +
ReferenceIsoform modified +
Drug modified +
FragmentInsertionModification modified +
BlackBoxEvent modified +
ReferenceMolecule modified +
Figure modified +
IntraChainCrosslinkedResidue modified +
ReviewStatus modified +
CellDevelopmentStep modified +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
EntitySet reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
Pathway reviewed +
Reaction reviewed +
PhysicalEntity reviewed +
ChemicalDrug reviewed +
Event reviewed +
Depolymerisation reviewed +
CandidateSet reviewed +
InteractionEvent reviewed +
Complex reviewed +
EntityWithAccessionedSequence reviewed +
SimpleEntity reviewed +
ProteinDrug reviewed +
Cell reviewed +
OtherEntity reviewed +
CellLineagePath reviewed +
GenomeEncodedEntity reviewed +
DefinedSet reviewed +
FailedReaction reviewed +
Polymerisation reviewed +
Polymer reviewed +
RNADrug reviewed +
PhysicalEntity authored 1
Reaction authored +
Pathway authored +
ReactionlikeEvent authored +
Drug authored 1
BlackBoxEvent authored +
EntitySet authored 1
CellDevelopmentStep authored +
EntityWithAccessionedSequence authored 1
Complex authored 1
InteractionEvent authored +
CandidateSet authored 1
Depolymerisation authored +
Event authored +
ChemicalDrug authored 1
FailedReaction authored +
DefinedSet authored 1
GenomeEncodedEntity authored 1
CellLineagePath authored +
Cell authored 1
OtherEntity authored 1
ProteinDrug authored 1
SimpleEntity authored 1
RNADrug authored 1
Polymer authored 1
Polymerisation authored +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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