Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
InteractionEvent structureModified +
Pathway structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
ProteinDrug revised +
Polymerisation revised +
DefinedSet revised +
CellDevelopmentStep revised +
Polymer revised +
CandidateSet revised +
Reaction revised +
Drug revised +
RNADrug revised +
Depolymerisation revised +
Event revised +
EntitySet revised +
Complex revised +
OtherEntity revised +
Pathway revised +
InteractionEvent revised +
GenomeEncodedEntity revised +
FailedReaction revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
Cell revised +
BlackBoxEvent revised +
ChemicalDrug revised +
SimpleEntity revised +
PhysicalEntity revised +
ReactionlikeEvent revised +
FragmentModification created 1
ReferenceSequence created 1
FragmentInsertionModification created 1
Depolymerisation created 1
Event created 1
EntitySet created 1
TranscriptionalModification created 1
PhysicalEntityCellType created 1
ExternalOntology created 1
_Deleted created 1
RNADrug created 1
DatabaseObject created 1
DefinedSet created 1
ControlReference created 1
RegulationReference created 1
Summation created 1
CatalystActivity created 1
Taxon created 1
PhysicalEntity created 1
PsiMod created 1
GO_BiologicalProcess created 1
NegativeRegulation created 1
PathwayDiagram created 1
StableIdentifier created 1
ReferenceGroup created 1
TranslationalModification created 1
Species created 1
Pathway created 1
DatabaseIdentifier created 1
Book created 1
Complex created 1
NegativeGeneExpressionRegulation created 1
OtherEntity created 1
FunctionalStatus created 1
ReactionType created 1
Compartment created 1
CatalystActivityReference created 1
Figure created 1
CrosslinkedResidue created 1
InstanceEdit created 1
_UpdateTracker created 1
ReferenceRNASequence created 1
CandidateSet created 1
GO_CellularComponent created 1
ProteinDrug created 1
ReferenceGeneProduct created 1
Polymerisation created 1
GroupModifiedResidue created 1
GO_MolecularFunction created 1
ChemicalDrug created 1
Person created 1
StableIdentifierHistory created 1
ReferenceDatabase created 1
AbstractModifiedResidue created 1
DrugActionType created 1
Cell created 1
InteractionEvent created 1
LiteratureReference created 1
ReplacedResidue created 1
StableIdentifierReleaseStatus created 1
FailedReaction created 1
ModifiedResidue created 1
ReferenceEntity created 1
IntraChainCrosslinkedResidue created 1
GeneticallyModifiedResidue created 1
Affiliation created 1
Disease created 1
InterChainCrosslinkedResidue created 1
Polymer created 1
Drug created 1
Reaction created 1
SimpleEntity created 1
ControlledVocabulary created 1
BlackBoxEvent created 1
EvidenceType created 1
Anatomy created 1
NonsenseMutation created 1
URL created 1
MarkerReference created 1
DeletedControlledVocabulary created 1
EntityWithAccessionedSequence created 1
ModifiedNucleotide created 1
EntityFunctionalStatus created 1
ReferenceDNASequence created 1
CellType created 1
NegativePrecedingEventReason created 1
PositiveGeneExpressionRegulation created 1
PositiveRegulation created 1
FragmentReplacedModification created 1
CellDevelopmentStep created 1
ReferenceTherapeutic created 1
ReviewStatus created 1
SequenceOntology created 1
Regulation created 1
NegativePrecedingEvent created 1
ReactionlikeEvent created 1
ReferenceMolecule created 1
Requirement created 1
_DeletedInstance created 1
RetractionStatus created 1
Publication created 1
FrontPage created 1
CellLineagePath created 1
FunctionalStatusType created 1
ReferenceIsoform created 1
FragmentDeletionModification created 1
GenomeEncodedEntity created 1
_Release created 1
RNADrug reviewed +
Depolymerisation reviewed +
Event reviewed +
Complex reviewed +
EntitySet reviewed +
OtherEntity reviewed +
ProteinDrug reviewed +
Polymerisation reviewed +
DefinedSet reviewed +
CellDevelopmentStep reviewed +
Polymer reviewed +
CandidateSet reviewed +
Reaction reviewed +
Drug reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
SimpleEntity reviewed +
PhysicalEntity reviewed +
ReactionlikeEvent reviewed +
Pathway reviewed +
InteractionEvent reviewed +
GenomeEncodedEntity reviewed +
FailedReaction reviewed +
CellLineagePath reviewed +
EntityWithAccessionedSequence reviewed +
Cell reviewed +
_Deleted replacementInstances +
Cell authored 1
EntityWithAccessionedSequence authored 1
CellLineagePath authored +
GenomeEncodedEntity authored 1
FailedReaction authored +
InteractionEvent authored +
Pathway authored +
PhysicalEntity authored 1
ReactionlikeEvent authored +
SimpleEntity authored 1
ChemicalDrug authored 1
BlackBoxEvent authored +
Reaction authored +
CandidateSet authored 1
Drug authored 1
CellDevelopmentStep authored +
Polymer authored 1
DefinedSet authored 1
ProteinDrug authored 1
Polymerisation authored +
EntitySet authored 1
Complex authored 1
OtherEntity authored 1
Depolymerisation authored +
Event authored +
RNADrug authored 1
Reaction edited +
CandidateSet edited +
Drug edited +
CellDevelopmentStep edited +
Polymer edited +
DefinedSet edited +
ProteinDrug edited +
Polymerisation edited +
Complex edited +
EntitySet edited +
OtherEntity edited +
Depolymerisation edited +
Event edited +
RNADrug edited +
Cell edited +
CellLineagePath edited +
EntityWithAccessionedSequence edited +
GenomeEncodedEntity edited +
FailedReaction edited +
Pathway edited +
InteractionEvent edited +
PhysicalEntity edited +
ReactionlikeEvent edited +
SimpleEntity edited +
BlackBoxEvent edited +
ChemicalDrug edited +
Depolymerisation internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
ModifiedNucleotide modified +
EntityWithAccessionedSequence modified +
DeletedControlledVocabulary modified +
ReferenceDNASequence modified +
EntityFunctionalStatus modified +
ControlledVocabulary modified +
SimpleEntity modified +
MarkerReference modified +
EvidenceType modified +
BlackBoxEvent modified +
URL modified +
NonsenseMutation modified +
Anatomy modified +
Reaction modified +
Drug modified +
InterChainCrosslinkedResidue modified +
Polymer modified +
Disease modified +
ReferenceEntity modified +
ModifiedResidue modified +
GeneticallyModifiedResidue modified +
Affiliation modified +
IntraChainCrosslinkedResidue modified +
ReferenceIsoform modified +
FunctionalStatusType modified +
FragmentDeletionModification modified +
FrontPage modified +
CellLineagePath modified +
_Release modified +
GenomeEncodedEntity modified +
ReferenceMolecule modified +
ReactionlikeEvent modified +
NegativePrecedingEvent modified +
Requirement modified +
_DeletedInstance modified +
SequenceOntology modified +
Regulation modified +
Publication modified +
RetractionStatus modified +
CellDevelopmentStep modified +
ReviewStatus modified +
ReferenceTherapeutic modified +
NegativePrecedingEventReason modified +
CellType modified +
PositiveGeneExpressionRegulation modified +
FragmentReplacedModification modified +
PositiveRegulation modified +
StableIdentifier modified +
PathwayDiagram modified +
ReferenceGroup modified +
NegativeRegulation modified +
TranslationalModification modified +
Pathway modified +
Species modified +
Taxon modified +
PhysicalEntity modified +
PsiMod modified +
GO_BiologicalProcess modified +
DatabaseObject modified +
RegulationReference modified +
ControlReference modified +
DefinedSet modified +
Summation modified +
CatalystActivity modified +
EntitySet modified +
TranscriptionalModification modified +
FragmentModification modified +
FragmentInsertionModification modified +
Depolymerisation modified +
ReferenceSequence modified +
Event modified +
RNADrug modified +
ExternalOntology modified +
_Deleted modified +
PhysicalEntityCellType modified +
DrugActionType modified +
Cell modified +
AbstractModifiedResidue modified +
ReplacedResidue modified +
StableIdentifierReleaseStatus modified +
FailedReaction modified +
InteractionEvent modified +
LiteratureReference modified +
GO_MolecularFunction modified +
StableIdentifierHistory modified +
Person modified +
ReferenceDatabase modified +
ChemicalDrug modified +
ReferenceRNASequence modified +
CandidateSet modified +
InstanceEdit modified +
_UpdateTracker modified +
GroupModifiedResidue modified +
ReferenceGeneProduct modified +
ProteinDrug modified +
GO_CellularComponent modified +
Polymerisation modified +
NegativeGeneExpressionRegulation modified +
Complex modified +
FunctionalStatus modified +
OtherEntity modified +
DatabaseIdentifier modified +
Book modified +
Compartment modified +
Figure modified +
CatalystActivityReference modified +
CrosslinkedResidue modified +
ReactionType modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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