Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ChemicalDrug reviewed +
DefinedSet reviewed +
ProteinDrug reviewed +
RNADrug reviewed +
Event reviewed +
Pathway reviewed +
OtherEntity reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
Drug reviewed +
Depolymerisation reviewed +
Cell reviewed +
CandidateSet reviewed +
CellLineagePath reviewed +
CellDevelopmentStep reviewed +
Complex reviewed +
Polymerisation reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
EntitySet reviewed +
InteractionEvent reviewed +
PhysicalEntity reviewed +
ReactionlikeEvent reviewed +
Polymerisation revised +
Complex revised +
InteractionEvent revised +
PhysicalEntity revised +
EntitySet revised +
EntityWithAccessionedSequence revised +
Reaction revised +
ReactionlikeEvent revised +
CellLineagePath revised +
CandidateSet revised +
CellDevelopmentStep revised +
OtherEntity revised +
SimpleEntity revised +
BlackBoxEvent revised +
Polymer revised +
FailedReaction revised +
Cell revised +
Depolymerisation revised +
Drug revised +
GenomeEncodedEntity revised +
DefinedSet revised +
ChemicalDrug revised +
ProteinDrug revised +
Event revised +
RNADrug revised +
Pathway revised +
Event internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
_Deleted replacementInstances +
CandidateSet edited +
CellLineagePath edited +
CellDevelopmentStep edited +
Complex edited +
Polymerisation edited +
Reaction edited +
EntityWithAccessionedSequence edited +
EntitySet edited +
PhysicalEntity edited +
InteractionEvent edited +
ReactionlikeEvent edited +
DefinedSet edited +
ChemicalDrug edited +
ProteinDrug edited +
RNADrug edited +
Event edited +
Pathway edited +
OtherEntity edited +
SimpleEntity edited +
FailedReaction edited +
Polymer edited +
BlackBoxEvent edited +
GenomeEncodedEntity edited +
Drug edited +
Depolymerisation edited +
Cell edited +
FailedReaction structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Event structureModified +
Disease modified +
Book modified +
OtherEntity modified +
ReferenceGeneProduct modified +
FailedReaction modified +
RegulationReference modified +
ReviewStatus modified +
Taxon modified +
NegativePrecedingEvent modified +
GenomeEncodedEntity modified +
ChemicalDrug modified +
DefinedSet modified +
ModifiedResidue modified +
InstanceEdit modified +
SequenceOntology modified +
Complex modified +
Polymerisation modified +
GeneticallyModifiedResidue modified +
Reaction modified +
PositiveRegulation modified +
PhysicalEntity modified +
ReplacedResidue modified +
TranscriptionalModification modified +
Publication modified +
FragmentReplacedModification modified +
ReactionlikeEvent modified +
FunctionalStatus modified +
_DeletedInstance modified +
CellDevelopmentStep modified +
FragmentInsertionModification modified +
CatalystActivityReference modified +
EntityFunctionalStatus modified +
ExternalOntology modified +
ReferenceIsoform modified +
NegativeGeneExpressionRegulation modified +
SimpleEntity modified +
ControlledVocabulary modified +
RetractionStatus modified +
LiteratureReference modified +
ReferenceDatabase modified +
FunctionalStatusType modified +
Depolymerisation modified +
DatabaseIdentifier modified +
ReferenceEntity modified +
ReferenceGroup modified +
Species modified +
EvidenceType modified +
RNADrug modified +
AbstractModifiedResidue modified +
Summation modified +
GO_CellularComponent modified +
EntityWithAccessionedSequence modified +
InteractionEvent modified +
ReferenceMolecule modified +
ReferenceDNASequence modified +
_Release modified +
CandidateSet modified +
CellLineagePath modified +
PathwayDiagram modified +
FragmentModification modified +
Affiliation modified +
Compartment modified +
StableIdentifierHistory modified +
StableIdentifier modified +
Regulation modified +
Polymer modified +
CrosslinkedResidue modified +
NegativePrecedingEventReason modified +
Drug modified +
ModifiedNucleotide modified +
Cell modified +
Figure modified +
CellType modified +
Requirement modified +
ProteinDrug modified +
DatabaseObject modified +
InterChainCrosslinkedResidue modified +
Pathway modified +
StableIdentifierReleaseStatus modified +
PositiveGeneExpressionRegulation modified +
EntitySet modified +
FrontPage modified +
_Deleted modified +
NonsenseMutation modified +
ReferenceTherapeutic modified +
GO_BiologicalProcess modified +
Person modified +
GO_MolecularFunction modified +
CatalystActivity modified +
BlackBoxEvent modified +
FragmentDeletionModification modified +
DrugActionType modified +
Event modified +
ControlReference modified +
PsiMod modified +
NegativeRegulation modified +
PhysicalEntityCellType modified +
TranslationalModification modified +
ReferenceSequence modified +
IntraChainCrosslinkedResidue modified +
MarkerReference modified +
URL modified +
ReferenceRNASequence modified +
_UpdateTracker modified +
ReactionType modified +
Anatomy modified +
DeletedControlledVocabulary modified +
GroupModifiedResidue modified +
GenomeEncodedEntity authored 1
Drug authored 1
Cell authored 1
Depolymerisation authored +
OtherEntity authored 1
SimpleEntity authored 1
FailedReaction authored +
BlackBoxEvent authored +
Polymer authored 1
RNADrug authored 1
Event authored +
Pathway authored +
DefinedSet authored 1
ChemicalDrug authored 1
ProteinDrug authored 1
ReactionlikeEvent authored +
Complex authored 1
Polymerisation authored +
EntityWithAccessionedSequence authored 1
EntitySet authored 1
Reaction authored +
InteractionEvent authored +
PhysicalEntity authored 1
CandidateSet authored 1
CellLineagePath authored +
CellDevelopmentStep authored +
ReferenceTherapeutic created 1
GO_BiologicalProcess created 1
Person created 1
GO_MolecularFunction created 1
CatalystActivity created 1
EntitySet created 1
StableIdentifierReleaseStatus created 1
PositiveGeneExpressionRegulation created 1
NonsenseMutation created 1
FrontPage created 1
_Deleted created 1
CellType created 1
Requirement created 1
ProteinDrug created 1
DatabaseObject created 1
Figure created 1
Pathway created 1
InterChainCrosslinkedResidue created 1
Polymer created 1
Regulation created 1
StableIdentifier created 1
NegativePrecedingEventReason created 1
Drug created 1
Cell created 1
ModifiedNucleotide created 1
CrosslinkedResidue created 1
Anatomy created 1
_UpdateTracker created 1
ReactionType created 1
DeletedControlledVocabulary created 1
GroupModifiedResidue created 1
IntraChainCrosslinkedResidue created 1
ReferenceSequence created 1
MarkerReference created 1
TranslationalModification created 1
ReferenceRNASequence created 1
URL created 1
DrugActionType created 1
PhysicalEntityCellType created 1
ControlReference created 1
PsiMod created 1
NegativeRegulation created 1
Event created 1
BlackBoxEvent created 1
FragmentDeletionModification created 1
CellDevelopmentStep created 1
_DeletedInstance created 1
CatalystActivityReference created 1
FragmentInsertionModification created 1
EntityFunctionalStatus created 1
Reaction created 1
PositiveRegulation created 1
PhysicalEntity created 1
Complex created 1
Polymerisation created 1
GeneticallyModifiedResidue created 1
Publication created 1
TranscriptionalModification created 1
FunctionalStatus created 1
ReactionlikeEvent created 1
FragmentReplacedModification created 1
ReplacedResidue created 1
ChemicalDrug created 1
DefinedSet created 1
ModifiedResidue created 1
InstanceEdit created 1
SequenceOntology created 1
ReferenceGeneProduct created 1
FailedReaction created 1
Book created 1
Disease created 1
OtherEntity created 1
Taxon created 1
GenomeEncodedEntity created 1
NegativePrecedingEvent created 1
RegulationReference created 1
ReviewStatus created 1
Affiliation created 1
FragmentModification created 1
PathwayDiagram created 1
_Release created 1
CandidateSet created 1
CellLineagePath created 1
StableIdentifierHistory created 1
Compartment created 1
EntityWithAccessionedSequence created 1
InteractionEvent created 1
ReferenceDNASequence created 1
ReferenceMolecule created 1
ReferenceGroup created 1
Species created 1
AbstractModifiedResidue created 1
Summation created 1
GO_CellularComponent created 1
EvidenceType created 1
RNADrug created 1
RetractionStatus created 1
LiteratureReference created 1
ReferenceIsoform created 1
ExternalOntology created 1
NegativeGeneExpressionRegulation created 1
ControlledVocabulary created 1
SimpleEntity created 1
FunctionalStatusType created 1
DatabaseIdentifier created 1
Depolymerisation created 1
ReferenceEntity created 1
ReferenceDatabase created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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