Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InteractionEvent structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
Event structureModified +
Depolymerisation structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Disease created 1
Anatomy created 1
ReferenceDatabase created 1
Species created 1
CrosslinkedResidue created 1
Book created 1
EntityWithAccessionedSequence created 1
FragmentDeletionModification created 1
BlackBoxEvent created 1
PhysicalEntity created 1
ReplacedResidue created 1
ReferenceTherapeutic created 1
RNADrug created 1
DeletedControlledVocabulary created 1
Cell created 1
StableIdentifier created 1
InterChainCrosslinkedResidue created 1
URL created 1
FrontPage created 1
TranslationalModification created 1
ReviewStatus created 1
Event created 1
ReferenceGeneProduct created 1
FragmentModification created 1
CatalystActivity created 1
ModifiedResidue created 1
CellDevelopmentStep created 1
ReferenceRNASequence created 1
NegativeGeneExpressionRegulation created 1
ModifiedNucleotide created 1
RegulationReference created 1
PositiveGeneExpressionRegulation created 1
OtherEntity created 1
Complex created 1
ControlledVocabulary created 1
DatabaseObject created 1
Affiliation created 1
ReferenceGroup created 1
Depolymerisation created 1
SimpleEntity created 1
AbstractModifiedResidue created 1
FragmentInsertionModification created 1
ReferenceEntity created 1
PsiMod created 1
CellLineagePath created 1
CandidateSet created 1
ReferenceIsoform created 1
_DeletedInstance created 1
PositiveRegulation created 1
GO_MolecularFunction created 1
Taxon created 1
FailedReaction created 1
Publication created 1
_Release created 1
StableIdentifierHistory created 1
TranscriptionalModification created 1
DatabaseIdentifier created 1
Regulation created 1
ReactionlikeEvent created 1
RetractionStatus created 1
MarkerReference created 1
GO_CellularComponent created 1
_UpdateTracker created 1
ReferenceSequence created 1
FunctionalStatusType created 1
EntityFunctionalStatus created 1
ControlReference created 1
Reaction created 1
FunctionalStatus created 1
SequenceOntology created 1
CatalystActivityReference created 1
Drug created 1
GroupModifiedResidue created 1
InteractionEvent created 1
CellType created 1
Requirement created 1
NonsenseMutation created 1
NegativePrecedingEventReason created 1
DefinedSet created 1
EntitySet created 1
NegativePrecedingEvent created 1
Pathway created 1
ExternalOntology created 1
ReferenceMolecule created 1
GenomeEncodedEntity created 1
DrugActionType created 1
ProteinDrug created 1
PhysicalEntityCellType created 1
ReactionType created 1
EvidenceType created 1
Polymerisation created 1
StableIdentifierReleaseStatus created 1
Figure created 1
Compartment created 1
GO_BiologicalProcess created 1
NegativeRegulation created 1
_Deleted created 1
IntraChainCrosslinkedResidue created 1
Polymer created 1
LiteratureReference created 1
ChemicalDrug created 1
InstanceEdit created 1
Summation created 1
GeneticallyModifiedResidue created 1
FragmentReplacedModification created 1
PathwayDiagram created 1
ReferenceDNASequence created 1
Person created 1
OtherEntity reviewed +
ProteinDrug reviewed +
CellDevelopmentStep reviewed +
ReactionlikeEvent reviewed +
GenomeEncodedEntity reviewed +
Pathway reviewed +
EntitySet reviewed +
PhysicalEntity reviewed +
Reaction reviewed +
BlackBoxEvent reviewed +
Polymerisation reviewed +
Complex reviewed +
EntityWithAccessionedSequence reviewed +
Drug reviewed +
Cell reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
CellLineagePath reviewed +
Polymer reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
Event reviewed +
DefinedSet reviewed +
InteractionEvent reviewed +
FailedReaction reviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
FunctionalStatusType modified +
_UpdateTracker modified +
ReferenceSequence modified +
MarkerReference modified +
GO_CellularComponent modified +
FunctionalStatus modified +
Reaction modified +
ControlReference modified +
EntityFunctionalStatus modified +
Regulation modified +
DatabaseIdentifier modified +
RetractionStatus modified +
ReactionlikeEvent modified +
Requirement modified +
CellType modified +
GroupModifiedResidue modified +
InteractionEvent modified +
DefinedSet modified +
NegativePrecedingEventReason modified +
NonsenseMutation modified +
SequenceOntology modified +
Drug modified +
CatalystActivityReference modified +
StableIdentifierReleaseStatus modified +
EvidenceType modified +
Polymerisation modified +
ReactionType modified +
PhysicalEntityCellType modified +
GO_BiologicalProcess modified +
Compartment modified +
Figure modified +
ExternalOntology modified +
Pathway modified +
EntitySet modified +
NegativePrecedingEvent modified +
ProteinDrug modified +
DrugActionType modified +
GenomeEncodedEntity modified +
ReferenceMolecule modified +
Person modified +
ReferenceDNASequence modified +
GeneticallyModifiedResidue modified +
PathwayDiagram modified +
FragmentReplacedModification modified +
Summation modified +
IntraChainCrosslinkedResidue modified +
NegativeRegulation modified +
_Deleted modified +
InstanceEdit modified +
LiteratureReference modified +
ChemicalDrug modified +
Polymer modified +
FragmentDeletionModification modified +
EntityWithAccessionedSequence modified +
Book modified +
BlackBoxEvent modified +
PhysicalEntity modified +
ReferenceDatabase modified +
Disease modified +
Anatomy modified +
Species modified +
CrosslinkedResidue modified +
FrontPage modified +
InterChainCrosslinkedResidue modified +
URL modified +
ReferenceGeneProduct modified +
Event modified +
ReviewStatus modified +
TranslationalModification modified +
ReplacedResidue modified +
StableIdentifier modified +
Cell modified +
DeletedControlledVocabulary modified +
RNADrug modified +
ReferenceTherapeutic modified +
Affiliation modified +
DatabaseObject modified +
ControlledVocabulary modified +
Complex modified +
ReferenceGroup modified +
CatalystActivity modified +
FragmentModification modified +
RegulationReference modified +
OtherEntity modified +
ModifiedNucleotide modified +
PositiveGeneExpressionRegulation modified +
ReferenceRNASequence modified +
CellDevelopmentStep modified +
NegativeGeneExpressionRegulation modified +
ModifiedResidue modified +
_Release modified +
StableIdentifierHistory modified +
Publication modified +
FailedReaction modified +
Taxon modified +
TranscriptionalModification modified +
ReferenceEntity modified +
FragmentInsertionModification modified +
AbstractModifiedResidue modified +
SimpleEntity modified +
Depolymerisation modified +
GO_MolecularFunction modified +
PositiveRegulation modified +
ReferenceIsoform modified +
_DeletedInstance modified +
CellLineagePath modified +
PsiMod modified +
CandidateSet modified +
Depolymerisation revised +
SimpleEntity revised +
Drug revised +
Cell revised +
Polymer revised +
RNADrug revised +
CellLineagePath revised +
CandidateSet revised +
ChemicalDrug revised +
InteractionEvent revised +
FailedReaction revised +
Event revised +
DefinedSet revised +
Pathway revised +
EntitySet revised +
ProteinDrug revised +
OtherEntity revised +
ReactionlikeEvent revised +
CellDevelopmentStep revised +
GenomeEncodedEntity revised +
Polymerisation revised +
Complex revised +
EntityWithAccessionedSequence revised +
PhysicalEntity revised +
BlackBoxEvent revised +
Reaction revised +
Polymerisation edited +
Complex edited +
EntityWithAccessionedSequence edited +
Reaction edited +
PhysicalEntity edited +
BlackBoxEvent edited +
Pathway edited +
EntitySet edited +
OtherEntity edited +
ProteinDrug edited +
CellDevelopmentStep edited +
ReactionlikeEvent edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
FailedReaction edited +
Event edited +
DefinedSet edited +
Depolymerisation edited +
SimpleEntity edited +
Drug edited +
Cell edited +
RNADrug edited +
ChemicalDrug edited +
Polymer edited +
CellLineagePath edited +
CandidateSet edited +
Depolymerisation authored +
SimpleEntity authored 1
Drug authored 1
Cell authored 1
RNADrug authored 1
Polymer authored 1
ChemicalDrug authored 1
CellLineagePath authored +
CandidateSet authored 1
FailedReaction authored +
InteractionEvent authored +
Event authored +
DefinedSet authored 1
Pathway authored +
EntitySet authored 1
ProteinDrug authored 1
OtherEntity authored 1
ReactionlikeEvent authored +
CellDevelopmentStep authored +
GenomeEncodedEntity authored 1
Polymerisation authored +
Complex authored 1
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
BlackBoxEvent authored +
Reaction authored +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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