Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_UpdateTracker created 1
Person created 1
Complex created 1
IntraChainCrosslinkedResidue created 1
InterChainCrosslinkedResidue created 1
Event created 1
PhysicalEntity created 1
CrosslinkedResidue created 1
Compartment created 1
_Release created 1
FunctionalStatusType created 1
ControlledVocabulary created 1
NonsenseMutation created 1
ReferenceMolecule created 1
GO_MolecularFunction created 1
ReferenceDNASequence created 1
ReplacedResidue created 1
OtherEntity created 1
Species created 1
Figure created 1
CellLineagePath created 1
FragmentDeletionModification created 1
DatabaseIdentifier created 1
Reaction created 1
PathwayDiagram created 1
EntityWithAccessionedSequence created 1
ControlReference created 1
ExternalOntology created 1
_DeletedInstance created 1
GenomeEncodedEntity created 1
ReactionlikeEvent created 1
Requirement created 1
PositiveRegulation created 1
SequenceOntology created 1
PsiMod created 1
Regulation created 1
Cell created 1
RNADrug created 1
DatabaseObject created 1
ChemicalDrug created 1
LiteratureReference created 1
TranscriptionalModification created 1
CatalystActivity created 1
ModifiedResidue created 1
EvidenceType created 1
Polymerisation created 1
TranslationalModification created 1
FailedReaction created 1
ProteinDrug created 1
PositiveGeneExpressionRegulation created 1
GO_CellularComponent created 1
FragmentReplacedModification created 1
Summation created 1
InstanceEdit created 1
Depolymerisation created 1
Disease created 1
ReferenceRNASequence created 1
StableIdentifierReleaseStatus created 1
FrontPage created 1
BlackBoxEvent created 1
ReferenceSequence created 1
InteractionEvent created 1
ReferenceDatabase created 1
ModifiedNucleotide created 1
Taxon created 1
GroupModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
ReferenceTherapeutic created 1
NegativePrecedingEventReason created 1
URL created 1
ReferenceGeneProduct created 1
Publication created 1
AbstractModifiedResidue created 1
NegativeRegulation created 1
RegulationReference created 1
CellDevelopmentStep created 1
PhysicalEntityCellType created 1
MarkerReference created 1
GO_BiologicalProcess created 1
FunctionalStatus created 1
NegativePrecedingEvent created 1
CandidateSet created 1
_Deleted created 1
Pathway created 1
ReferenceGroup created 1
Affiliation created 1
DrugActionType created 1
FragmentModification created 1
ReactionType created 1
ReferenceEntity created 1
ReviewStatus created 1
GeneticallyModifiedResidue created 1
RetractionStatus created 1
Anatomy created 1
Book created 1
SimpleEntity created 1
CatalystActivityReference created 1
EntityFunctionalStatus created 1
ReferenceIsoform created 1
CellType created 1
FragmentInsertionModification created 1
Drug created 1
StableIdentifier created 1
Polymer created 1
StableIdentifierHistory created 1
EntitySet created 1
DeletedControlledVocabulary created 1
DefinedSet created 1
_Deleted replacementInstances +
DeletedControlledVocabulary modified +
DefinedSet modified +
EntitySet modified +
StableIdentifierHistory modified +
Polymer modified +
Drug modified +
FragmentInsertionModification modified +
StableIdentifier modified +
ReferenceIsoform modified +
CellType modified +
EntityFunctionalStatus modified +
CatalystActivityReference modified +
SimpleEntity modified +
Book modified +
Anatomy modified +
RetractionStatus modified +
GeneticallyModifiedResidue modified +
ReviewStatus modified +
ReferenceEntity modified +
ReactionType modified +
DrugActionType modified +
Affiliation modified +
FragmentModification modified +
Pathway modified +
ReferenceGroup modified +
CandidateSet modified +
_Deleted modified +
NegativePrecedingEvent modified +
FunctionalStatus modified +
GO_BiologicalProcess modified +
MarkerReference modified +
PhysicalEntityCellType modified +
CellDevelopmentStep modified +
NegativeRegulation modified +
RegulationReference modified +
AbstractModifiedResidue modified +
Publication modified +
URL modified +
ReferenceGeneProduct modified +
ReferenceTherapeutic modified +
NegativePrecedingEventReason modified +
GroupModifiedResidue modified +
NegativeGeneExpressionRegulation modified +
ModifiedNucleotide modified +
Taxon modified +
ReferenceDatabase modified +
ReferenceSequence modified +
BlackBoxEvent modified +
InteractionEvent modified +
FrontPage modified +
StableIdentifierReleaseStatus modified +
Disease modified +
ReferenceRNASequence modified +
Depolymerisation modified +
InstanceEdit modified +
Summation modified +
FragmentReplacedModification modified +
GO_CellularComponent modified +
PositiveGeneExpressionRegulation modified +
ProteinDrug modified +
FailedReaction modified +
TranslationalModification modified +
Polymerisation modified +
EvidenceType modified +
ModifiedResidue modified +
CatalystActivity modified +
LiteratureReference modified +
TranscriptionalModification modified +
DatabaseObject modified +
ChemicalDrug modified +
RNADrug modified +
Cell modified +
Regulation modified +
PsiMod modified +
PositiveRegulation modified +
SequenceOntology modified +
_DeletedInstance modified +
ControlReference modified +
ExternalOntology modified +
Requirement modified +
ReactionlikeEvent modified +
GenomeEncodedEntity modified +
EntityWithAccessionedSequence modified +
PathwayDiagram modified +
Reaction modified +
FragmentDeletionModification modified +
DatabaseIdentifier modified +
CellLineagePath modified +
Figure modified +
Species modified +
ReplacedResidue modified +
OtherEntity modified +
ReferenceDNASequence modified +
GO_MolecularFunction modified +
ReferenceMolecule modified +
NonsenseMutation modified +
ControlledVocabulary modified +
FunctionalStatusType modified +
_Release modified +
PhysicalEntity modified +
Compartment modified +
CrosslinkedResidue modified +
Event modified +
InterChainCrosslinkedResidue modified +
IntraChainCrosslinkedResidue modified +
Complex modified +
Person modified +
_UpdateTracker modified +
ReactionlikeEvent revised +
GenomeEncodedEntity revised +
CellDevelopmentStep revised +
Reaction revised +
EntityWithAccessionedSequence revised +
Complex revised +
Depolymerisation revised +
PhysicalEntity revised +
Cell revised +
InteractionEvent revised +
BlackBoxEvent revised +
Event revised +
CandidateSet revised +
Pathway revised +
RNADrug revised +
SimpleEntity revised +
ChemicalDrug revised +
Drug revised +
OtherEntity revised +
Polymerisation revised +
DefinedSet revised +
ProteinDrug revised +
Polymer revised +
EntitySet revised +
CellLineagePath revised +
FailedReaction revised +
ProteinDrug reviewed +
DefinedSet reviewed +
EntitySet reviewed +
Polymer reviewed +
FailedReaction reviewed +
CellLineagePath reviewed +
Drug reviewed +
OtherEntity reviewed +
Polymerisation reviewed +
SimpleEntity reviewed +
ChemicalDrug reviewed +
RNADrug reviewed +
Cell reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
BlackBoxEvent reviewed +
CandidateSet reviewed +
Event reviewed +
Pathway reviewed +
Complex reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
GenomeEncodedEntity reviewed +
CellDevelopmentStep reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
Pathway authored +
CandidateSet authored 1
Event authored +
InteractionEvent authored +
BlackBoxEvent authored +
PhysicalEntity authored 1
Cell authored 1
RNADrug authored 1
EntityWithAccessionedSequence authored 1
CellDevelopmentStep authored +
Reaction authored +
ReactionlikeEvent authored +
GenomeEncodedEntity authored 1
Depolymerisation authored +
Complex authored 1
Polymerisation authored +
OtherEntity authored 1
Drug authored 1
FailedReaction authored +
CellLineagePath authored +
EntitySet authored 1
Polymer authored 1
ProteinDrug authored 1
DefinedSet authored 1
ChemicalDrug authored 1
SimpleEntity authored 1
Pathway structureModified +
Polymerisation structureModified +
Event structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
Drug edited +
Polymerisation edited +
OtherEntity edited +
ProteinDrug edited +
DefinedSet edited +
CellLineagePath edited +
FailedReaction edited +
Polymer edited +
EntitySet edited +
SimpleEntity edited +
ChemicalDrug edited +
BlackBoxEvent edited +
InteractionEvent edited +
Cell edited +
PhysicalEntity edited +
Pathway edited +
Event edited +
CandidateSet edited +
RNADrug edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
EntityWithAccessionedSequence edited +
CellDevelopmentStep edited +
Reaction edited +
Depolymerisation edited +
Complex edited +
Event internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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