Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent reviewed +
OtherEntity reviewed +
SimpleEntity reviewed +
RNADrug reviewed +
Drug reviewed +
Polymerisation reviewed +
FailedReaction reviewed +
InteractionEvent reviewed +
Event reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
EntitySet reviewed +
CandidateSet reviewed +
CellLineagePath reviewed +
CellDevelopmentStep reviewed +
Pathway reviewed +
BlackBoxEvent reviewed +
Cell reviewed +
Polymer reviewed +
Complex reviewed +
Reaction reviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent edited +
Polymerisation edited +
Drug edited +
RNADrug edited +
SimpleEntity edited +
OtherEntity edited +
Depolymerisation edited +
DefinedSet edited +
Event edited +
InteractionEvent edited +
FailedReaction edited +
CellLineagePath edited +
CandidateSet edited +
EntitySet edited +
CellDevelopmentStep edited +
Pathway edited +
Reaction edited +
Polymer edited +
Complex edited +
Cell edited +
BlackBoxEvent edited +
GenomeEncodedEntity edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
ProteinDrug edited +
ChemicalDrug edited +
Reaction revised +
Cell revised +
BlackBoxEvent revised +
Polymer revised +
Complex revised +
GenomeEncodedEntity revised +
ProteinDrug revised +
ChemicalDrug revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
CellDevelopmentStep revised +
Pathway revised +
Event revised +
Depolymerisation revised +
DefinedSet revised +
FailedReaction revised +
InteractionEvent revised +
CellLineagePath revised +
CandidateSet revised +
EntitySet revised +
ReactionlikeEvent revised +
RNADrug revised +
Drug revised +
Polymerisation revised +
SimpleEntity revised +
OtherEntity revised +
DatabaseObject created 1
GroupModifiedResidue created 1
StableIdentifierReleaseStatus created 1
ControlReference created 1
RegulationReference created 1
EvidenceType created 1
ReferenceGeneProduct created 1
RetractionStatus created 1
ReviewStatus created 1
GenomeEncodedEntity created 1
ControlledVocabulary created 1
PhysicalEntity created 1
GeneticallyModifiedResidue created 1
_UpdateTracker created 1
RNADrug created 1
MarkerReference created 1
Disease created 1
SimpleEntity created 1
CellType created 1
InstanceEdit created 1
CatalystActivityReference created 1
GO_MolecularFunction created 1
CellLineagePath created 1
FragmentReplacedModification created 1
Regulation created 1
ModifiedResidue created 1
SequenceOntology created 1
Depolymerisation created 1
FragmentModification created 1
FailedReaction created 1
Species created 1
ReferenceDatabase created 1
Pathway created 1
FrontPage created 1
ReferenceGroup created 1
Figure created 1
ModifiedNucleotide created 1
InterChainCrosslinkedResidue created 1
DatabaseIdentifier created 1
ProteinDrug created 1
ReferenceEntity created 1
Book created 1
NonsenseMutation created 1
IntraChainCrosslinkedResidue created 1
Polymer created 1
Complex created 1
ReferenceTherapeutic created 1
Cell created 1
Compartment created 1
GO_BiologicalProcess created 1
OtherEntity created 1
ReferenceIsoform created 1
StableIdentifierHistory created 1
PositiveRegulation created 1
FragmentInsertionModification created 1
Event created 1
FunctionalStatusType created 1
InteractionEvent created 1
NegativeRegulation created 1
URL created 1
Publication created 1
Summation created 1
PositiveGeneExpressionRegulation created 1
Anatomy created 1
_DeletedInstance created 1
ReactionlikeEvent created 1
Taxon created 1
EntityFunctionalStatus created 1
PsiMod created 1
CandidateSet created 1
CrosslinkedResidue created 1
FragmentDeletionModification created 1
ReferenceMolecule created 1
StableIdentifier created 1
ReferenceSequence created 1
GO_CellularComponent created 1
Requirement created 1
CellDevelopmentStep created 1
NegativePrecedingEventReason created 1
NegativeGeneExpressionRegulation created 1
ReferenceDNASequence created 1
_Deleted created 1
NegativePrecedingEvent created 1
PathwayDiagram created 1
_Release created 1
ReactionType created 1
EntityWithAccessionedSequence created 1
DeletedControlledVocabulary created 1
ChemicalDrug created 1
ReplacedResidue created 1
Reaction created 1
AbstractModifiedResidue created 1
BlackBoxEvent created 1
Drug created 1
Polymerisation created 1
CatalystActivity created 1
ReferenceRNASequence created 1
TranslationalModification created 1
ExternalOntology created 1
TranscriptionalModification created 1
DrugActionType created 1
FunctionalStatus created 1
EntitySet created 1
Person created 1
LiteratureReference created 1
Affiliation created 1
DefinedSet created 1
CellLineagePath structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
Reaction structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
_Deleted replacementInstances +
Polymerisation internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
SimpleEntity authored 1
OtherEntity authored 1
Drug authored 1
Polymerisation authored +
RNADrug authored 1
ReactionlikeEvent authored +
EntitySet authored 1
CandidateSet authored 1
CellLineagePath authored +
InteractionEvent authored +
FailedReaction authored +
Depolymerisation authored +
DefinedSet authored 1
Event authored +
Pathway authored +
CellDevelopmentStep authored +
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
ChemicalDrug authored 1
ProteinDrug authored 1
GenomeEncodedEntity authored 1
Complex authored 1
Polymer authored 1
BlackBoxEvent authored +
Cell authored 1
Reaction authored +
ModifiedResidue modified +
SequenceOntology modified +
FragmentReplacedModification modified +
CellLineagePath modified +
Regulation modified +
GO_MolecularFunction modified +
FailedReaction modified +
Species modified +
FragmentModification modified +
Depolymerisation modified +
CellType modified +
Disease modified +
MarkerReference modified +
SimpleEntity modified +
RNADrug modified +
CatalystActivityReference modified +
InstanceEdit modified +
GeneticallyModifiedResidue modified +
PhysicalEntity modified +
EvidenceType modified +
GenomeEncodedEntity modified +
ReferenceGeneProduct modified +
ReviewStatus modified +
ControlledVocabulary modified +
RetractionStatus modified +
_UpdateTracker modified +
GroupModifiedResidue modified +
DatabaseObject modified +
ControlReference modified +
RegulationReference modified +
StableIdentifierReleaseStatus modified +
FragmentInsertionModification modified +
StableIdentifierHistory modified +
PositiveRegulation modified +
FunctionalStatusType modified +
InteractionEvent modified +
Event modified +
OtherEntity modified +
Compartment modified +
GO_BiologicalProcess modified +
ReferenceIsoform modified +
ReferenceEntity modified +
ProteinDrug modified +
DatabaseIdentifier modified +
InterChainCrosslinkedResidue modified +
Cell modified +
Polymer modified +
Complex modified +
ReferenceTherapeutic modified +
IntraChainCrosslinkedResidue modified +
Book modified +
NonsenseMutation modified +
Figure modified +
FrontPage modified +
ReferenceGroup modified +
Pathway modified +
ReferenceDatabase modified +
ModifiedNucleotide modified +
CrosslinkedResidue modified +
CandidateSet modified +
Requirement modified +
ReferenceSequence modified +
GO_CellularComponent modified +
StableIdentifier modified +
ReferenceMolecule modified +
FragmentDeletionModification modified +
Anatomy modified +
PsiMod modified +
Taxon modified +
ReactionlikeEvent modified +
EntityFunctionalStatus modified +
_DeletedInstance modified +
PositiveGeneExpressionRegulation modified +
Summation modified +
Publication modified +
URL modified +
NegativeRegulation modified +
EntitySet modified +
FunctionalStatus modified +
DrugActionType modified +
LiteratureReference modified +
Affiliation modified +
Person modified +
DefinedSet modified +
Drug modified +
Polymerisation modified +
TranscriptionalModification modified +
ExternalOntology modified +
TranslationalModification modified +
ReferenceRNASequence modified +
CatalystActivity modified +
ChemicalDrug modified +
EntityWithAccessionedSequence modified +
DeletedControlledVocabulary modified +
ReactionType modified +
BlackBoxEvent modified +
AbstractModifiedResidue modified +
Reaction modified +
ReplacedResidue modified +
NegativePrecedingEventReason modified +
NegativeGeneExpressionRegulation modified +
CellDevelopmentStep modified +
_Release modified +
PathwayDiagram modified +
ReferenceDNASequence modified +
_Deleted modified +
NegativePrecedingEvent modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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