Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Event structureModified +
FailedReaction structureModified +
Pathway structureModified +
Reaction structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
_Deleted replacementInstances +
BlackBoxEvent authored +
ReactionlikeEvent authored +
SimpleEntity authored 1
RNADrug authored 1
EntitySet authored 1
CellLineagePath authored +
Polymerisation authored +
Complex authored 1
DefinedSet authored 1
Pathway authored +
InteractionEvent authored +
Reaction authored +
ChemicalDrug authored 1
ProteinDrug authored 1
OtherEntity authored 1
Event authored +
FailedReaction authored +
Cell authored 1
CellDevelopmentStep authored +
GenomeEncodedEntity authored 1
Depolymerisation authored +
Polymer authored 1
EntityWithAccessionedSequence authored 1
Drug authored 1
CandidateSet authored 1
PhysicalEntity authored 1
Depolymerisation edited +
GenomeEncodedEntity edited +
Cell edited +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
Polymer edited +
PhysicalEntity edited +
Drug edited +
CandidateSet edited +
BlackBoxEvent edited +
ReactionlikeEvent edited +
SimpleEntity edited +
Polymerisation edited +
Complex edited +
CellLineagePath edited +
EntitySet edited +
RNADrug edited +
InteractionEvent edited +
Pathway edited +
Reaction edited +
DefinedSet edited +
FailedReaction edited +
Event edited +
OtherEntity edited +
ProteinDrug edited +
ChemicalDrug edited +
Polymerisation revised +
Complex revised +
RNADrug revised +
CellLineagePath revised +
EntitySet revised +
BlackBoxEvent revised +
SimpleEntity revised +
ReactionlikeEvent revised +
OtherEntity revised +
Event revised +
FailedReaction revised +
ChemicalDrug revised +
ProteinDrug revised +
DefinedSet revised +
Pathway revised +
Reaction revised +
InteractionEvent revised +
Depolymerisation revised +
GenomeEncodedEntity revised +
Cell revised +
CellDevelopmentStep revised +
PhysicalEntity revised +
CandidateSet revised +
Drug revised +
EntityWithAccessionedSequence revised +
Polymer revised +
DefinedSet reviewed +
Pathway reviewed +
Reaction reviewed +
InteractionEvent reviewed +
Event reviewed +
OtherEntity reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
ProteinDrug reviewed +
BlackBoxEvent reviewed +
ReactionlikeEvent reviewed +
SimpleEntity reviewed +
Complex reviewed +
Polymerisation reviewed +
RNADrug reviewed +
EntitySet reviewed +
CellLineagePath reviewed +
EntityWithAccessionedSequence reviewed +
Polymer reviewed +
PhysicalEntity reviewed +
Drug reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
Depolymerisation reviewed +
CellDevelopmentStep reviewed +
Cell reviewed +
PathwayDiagram created 1
Person created 1
EntityWithAccessionedSequence created 1
ReferenceGeneProduct created 1
Figure created 1
PhysicalEntity created 1
RetractionStatus created 1
GO_MolecularFunction created 1
Cell created 1
FrontPage created 1
Depolymerisation created 1
ReferenceEntity created 1
NegativePrecedingEventReason created 1
NegativeRegulation created 1
ControlledVocabulary created 1
ReactionType created 1
ChemicalDrug created 1
_Release created 1
EntityFunctionalStatus created 1
Complex created 1
Polymerisation created 1
Species created 1
ReferenceDatabase created 1
Polymer created 1
StableIdentifierHistory created 1
TranscriptionalModification created 1
GO_CellularComponent created 1
Drug created 1
StableIdentifier created 1
InterChainCrosslinkedResidue created 1
CatalystActivityReference created 1
ReplacedResidue created 1
_Deleted created 1
AbstractModifiedResidue created 1
CellDevelopmentStep created 1
FragmentDeletionModification created 1
InteractionEvent created 1
Reaction created 1
FragmentModification created 1
RegulationReference created 1
OtherEntity created 1
ReactionlikeEvent created 1
DrugActionType created 1
CellType created 1
Regulation created 1
IntraChainCrosslinkedResidue created 1
FunctionalStatus created 1
NegativeGeneExpressionRegulation created 1
CrosslinkedResidue created 1
PsiMod created 1
Affiliation created 1
ReviewStatus created 1
Requirement created 1
ReferenceRNASequence created 1
ReferenceMolecule created 1
MarkerReference created 1
SequenceOntology created 1
GenomeEncodedEntity created 1
FragmentInsertionModification created 1
Pathway created 1
ReferenceDNASequence created 1
ReferenceIsoform created 1
GeneticallyModifiedResidue created 1
StableIdentifierReleaseStatus created 1
DatabaseObject created 1
FailedReaction created 1
ExternalOntology created 1
SimpleEntity created 1
Taxon created 1
CatalystActivity created 1
Compartment created 1
ReferenceGroup created 1
Disease created 1
ControlReference created 1
EntitySet created 1
CellLineagePath created 1
URL created 1
RNADrug created 1
NegativePrecedingEvent created 1
_UpdateTracker created 1
PositiveRegulation created 1
EvidenceType created 1
Summation created 1
InstanceEdit created 1
CandidateSet created 1
ModifiedNucleotide created 1
ReferenceTherapeutic created 1
NonsenseMutation created 1
FunctionalStatusType created 1
ReferenceSequence created 1
TranslationalModification created 1
PhysicalEntityCellType created 1
Anatomy created 1
DefinedSet created 1
ModifiedResidue created 1
DeletedControlledVocabulary created 1
FragmentReplacedModification created 1
Book created 1
PositiveGeneExpressionRegulation created 1
ProteinDrug created 1
_DeletedInstance created 1
GroupModifiedResidue created 1
DatabaseIdentifier created 1
GO_BiologicalProcess created 1
Event created 1
BlackBoxEvent created 1
LiteratureReference created 1
Publication created 1
ReplacedResidue modified +
CatalystActivityReference modified +
FragmentDeletionModification modified +
_Deleted modified +
AbstractModifiedResidue modified +
CellDevelopmentStep modified +
StableIdentifierHistory modified +
Polymer modified +
InterChainCrosslinkedResidue modified +
TranscriptionalModification modified +
StableIdentifier modified +
Drug modified +
GO_CellularComponent modified +
Regulation modified +
CellType modified +
DrugActionType modified +
ReactionlikeEvent modified +
NegativeGeneExpressionRegulation modified +
FunctionalStatus modified +
CrosslinkedResidue modified +
IntraChainCrosslinkedResidue modified +
InteractionEvent modified +
Reaction modified +
FragmentModification modified +
RegulationReference modified +
OtherEntity modified +
GO_MolecularFunction modified +
Depolymerisation modified +
ReferenceEntity modified +
FrontPage modified +
Cell modified +
EntityWithAccessionedSequence modified +
PathwayDiagram modified +
Person modified +
PhysicalEntity modified +
RetractionStatus modified +
ReferenceGeneProduct modified +
Figure modified +
Complex modified +
ReferenceDatabase modified +
Polymerisation modified +
Species modified +
ControlledVocabulary modified +
ReactionType modified +
NegativeRegulation modified +
NegativePrecedingEventReason modified +
EntityFunctionalStatus modified +
ChemicalDrug modified +
_Release modified +
ReferenceSequence modified +
PhysicalEntityCellType modified +
TranslationalModification modified +
EvidenceType modified +
PositiveRegulation modified +
_UpdateTracker modified +
Summation modified +
InstanceEdit modified +
NonsenseMutation modified +
ReferenceTherapeutic modified +
FunctionalStatusType modified +
ModifiedNucleotide modified +
CandidateSet modified +
BlackBoxEvent modified +
LiteratureReference modified +
Publication modified +
DeletedControlledVocabulary modified +
FragmentReplacedModification modified +
Book modified +
Anatomy modified +
ModifiedResidue modified +
DefinedSet modified +
Event modified +
_DeletedInstance modified +
PositiveGeneExpressionRegulation modified +
GroupModifiedResidue modified +
ProteinDrug modified +
GO_BiologicalProcess modified +
DatabaseIdentifier modified +
MarkerReference modified +
GenomeEncodedEntity modified +
SequenceOntology modified +
ReviewStatus modified +
PsiMod modified +
Affiliation modified +
ReferenceMolecule modified +
ReferenceRNASequence modified +
Requirement modified +
Compartment modified +
ReferenceGroup modified +
SimpleEntity modified +
ExternalOntology modified +
CatalystActivity modified +
Taxon modified +
NegativePrecedingEvent modified +
Disease modified +
ControlReference modified +
CellLineagePath modified +
EntitySet modified +
RNADrug modified +
URL modified +
ReferenceIsoform modified +
GeneticallyModifiedResidue modified +
Pathway modified +
ReferenceDNASequence modified +
FragmentInsertionModification modified +
DatabaseObject modified +
FailedReaction modified +
StableIdentifierReleaseStatus modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

Follow Reactome