Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InstanceEdit modified +
InterChainCrosslinkedResidue modified +
Drug modified +
Event modified +
NegativePrecedingEvent modified +
CatalystActivityReference modified +
OtherEntity modified +
CatalystActivity modified +
StableIdentifier modified +
ChemicalDrug modified +
GO_MolecularFunction modified +
EntityFunctionalStatus modified +
PhysicalEntityCellType modified +
FunctionalStatus modified +
Taxon modified +
AbstractModifiedResidue modified +
RegulationReference modified +
ReferenceMolecule modified +
Book modified +
FragmentDeletionModification modified +
ReviewStatus modified +
NonsenseMutation modified +
FunctionalStatusType modified +
ReferenceGeneProduct modified +
Species modified +
ReferenceGroup modified +
GO_CellularComponent modified +
ReactionlikeEvent modified +
FailedReaction modified +
MarkerReference modified +
ControlledVocabulary modified +
PositiveGeneExpressionRegulation modified +
ExternalOntology modified +
PhysicalEntity modified +
GeneticallyModifiedResidue modified +
CellDevelopmentStep modified +
FragmentReplacedModification modified +
StableIdentifierReleaseStatus modified +
GroupModifiedResidue modified +
ModifiedResidue modified +
BlackBoxEvent modified +
NegativePrecedingEventReason modified +
Publication modified +
GenomeEncodedEntity modified +
FragmentInsertionModification modified +
Polymer modified +
TranslationalModification modified +
ModifiedNucleotide modified +
Regulation modified +
FrontPage modified +
EvidenceType modified +
CrosslinkedResidue modified +
Depolymerisation modified +
PathwayDiagram modified +
IntraChainCrosslinkedResidue modified +
DeletedControlledVocabulary modified +
Anatomy modified +
InteractionEvent modified +
ReferenceEntity modified +
_UpdateTracker modified +
CandidateSet modified +
PsiMod modified +
ReferenceRNASequence modified +
_Deleted modified +
GO_BiologicalProcess modified +
URL modified +
RetractionStatus modified +
CellType modified +
ReferenceTherapeutic modified +
Affiliation modified +
Complex modified +
DatabaseIdentifier modified +
DrugActionType modified +
Person modified +
NegativeGeneExpressionRegulation modified +
StableIdentifierHistory modified +
PositiveRegulation modified +
SequenceOntology modified +
Summation modified +
ControlReference modified +
TranscriptionalModification modified +
Cell modified +
Disease modified +
ReferenceIsoform modified +
ReplacedResidue modified +
RNADrug modified +
Compartment modified +
Reaction modified +
_DeletedInstance modified +
CellLineagePath modified +
LiteratureReference modified +
ReferenceSequence modified +
ReferenceDNASequence modified +
SimpleEntity modified +
Requirement modified +
FragmentModification modified +
ReactionType modified +
_Release modified +
EntitySet modified +
DatabaseObject modified +
Pathway modified +
NegativeRegulation modified +
DefinedSet modified +
ReferenceDatabase modified +
Figure modified +
Polymerisation modified +
EntityWithAccessionedSequence modified +
ProteinDrug modified +
Polymer edited +
GenomeEncodedEntity edited +
Event edited +
Drug edited +
Cell edited +
OtherEntity edited +
RNADrug edited +
Depolymerisation edited +
ChemicalDrug edited +
ReactionlikeEvent edited +
FailedReaction edited +
Reaction edited +
InteractionEvent edited +
SimpleEntity edited +
CellLineagePath edited +
CellDevelopmentStep edited +
EntitySet edited +
CandidateSet edited +
PhysicalEntity edited +
DefinedSet edited +
Complex edited +
Pathway edited +
ProteinDrug edited +
BlackBoxEvent edited +
EntityWithAccessionedSequence edited +
Polymerisation edited +
_Deleted replacementInstances +
Event revised +
Drug revised +
Cell revised +
Polymer revised +
GenomeEncodedEntity revised +
Depolymerisation revised +
ReactionlikeEvent revised +
ChemicalDrug revised +
FailedReaction revised +
Reaction revised +
OtherEntity revised +
RNADrug revised +
CellDevelopmentStep revised +
EntitySet revised +
PhysicalEntity revised +
CandidateSet revised +
InteractionEvent revised +
SimpleEntity revised +
CellLineagePath revised +
ProteinDrug revised +
BlackBoxEvent revised +
EntityWithAccessionedSequence revised +
Polymerisation revised +
Complex revised +
DefinedSet revised +
Pathway revised +
Event structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
Pathway structureModified +
ProteinDrug authored 1
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
Polymerisation authored +
Complex authored 1
DefinedSet authored 1
Pathway authored +
CellDevelopmentStep authored +
EntitySet authored 1
PhysicalEntity authored 1
CandidateSet authored 1
InteractionEvent authored +
SimpleEntity authored 1
CellLineagePath authored +
Depolymerisation authored +
FailedReaction authored +
ReactionlikeEvent authored +
ChemicalDrug authored 1
Reaction authored +
OtherEntity authored 1
RNADrug authored 1
Event authored +
Cell authored 1
Drug authored 1
Polymer authored 1
GenomeEncodedEntity authored 1
Depolymerisation reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
FailedReaction reviewed +
OtherEntity reviewed +
RNADrug reviewed +
Event reviewed +
Drug reviewed +
Cell reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
EntityWithAccessionedSequence reviewed +
BlackBoxEvent reviewed +
ProteinDrug reviewed +
Polymerisation reviewed +
DefinedSet reviewed +
Complex reviewed +
Pathway reviewed +
EntitySet reviewed +
CellDevelopmentStep reviewed +
CandidateSet reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
BlackBoxEvent created 1
NegativePrecedingEventReason created 1
GroupModifiedResidue created 1
ModifiedResidue created 1
StableIdentifierReleaseStatus created 1
CellDevelopmentStep created 1
FragmentReplacedModification created 1
PhysicalEntity created 1
GeneticallyModifiedResidue created 1
ExternalOntology created 1
PositiveGeneExpressionRegulation created 1
ControlledVocabulary created 1
GO_CellularComponent created 1
MarkerReference created 1
ReactionlikeEvent created 1
FailedReaction created 1
ReferenceGroup created 1
ReferenceGeneProduct created 1
Species created 1
FunctionalStatusType created 1
NonsenseMutation created 1
FragmentDeletionModification created 1
ReviewStatus created 1
Book created 1
ReferenceMolecule created 1
RegulationReference created 1
AbstractModifiedResidue created 1
PhysicalEntityCellType created 1
Taxon created 1
FunctionalStatus created 1
EntityFunctionalStatus created 1
GO_MolecularFunction created 1
ChemicalDrug created 1
StableIdentifier created 1
OtherEntity created 1
CatalystActivity created 1
Event created 1
CatalystActivityReference created 1
NegativePrecedingEvent created 1
InterChainCrosslinkedResidue created 1
Drug created 1
InstanceEdit created 1
EntityWithAccessionedSequence created 1
ProteinDrug created 1
Figure created 1
Polymerisation created 1
ReferenceDatabase created 1
DefinedSet created 1
Pathway created 1
NegativeRegulation created 1
EntitySet created 1
DatabaseObject created 1
_Release created 1
Requirement created 1
FragmentModification created 1
ReactionType created 1
CellLineagePath created 1
ReferenceDNASequence created 1
LiteratureReference created 1
ReferenceSequence created 1
SimpleEntity created 1
Reaction created 1
_DeletedInstance created 1
Compartment created 1
RNADrug created 1
ReferenceIsoform created 1
Disease created 1
ReplacedResidue created 1
TranscriptionalModification created 1
Cell created 1
SequenceOntology created 1
Summation created 1
ControlReference created 1
Person created 1
NegativeGeneExpressionRegulation created 1
StableIdentifierHistory created 1
PositiveRegulation created 1
DrugActionType created 1
ReferenceTherapeutic created 1
Affiliation created 1
Complex created 1
DatabaseIdentifier created 1
CellType created 1
RetractionStatus created 1
_Deleted created 1
ReferenceRNASequence created 1
GO_BiologicalProcess created 1
URL created 1
_UpdateTracker created 1
CandidateSet created 1
PsiMod created 1
InteractionEvent created 1
Anatomy created 1
ReferenceEntity created 1
DeletedControlledVocabulary created 1
EvidenceType created 1
CrosslinkedResidue created 1
IntraChainCrosslinkedResidue created 1
Depolymerisation created 1
PathwayDiagram created 1
Regulation created 1
FrontPage created 1
TranslationalModification created 1
ModifiedNucleotide created 1
Polymer created 1
Publication created 1
GenomeEncodedEntity created 1
FragmentInsertionModification created 1
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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