Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
InteractionEvent internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
CandidateSet edited +
CellDevelopmentStep edited +
Reaction edited +
Polymerisation edited +
RNADrug edited +
Polymer edited +
ProteinDrug edited +
Event edited +
InteractionEvent edited +
SimpleEntity edited +
Pathway edited +
EntitySet edited +
ChemicalDrug edited +
DefinedSet edited +
Complex edited +
Drug edited +
GenomeEncodedEntity edited +
Depolymerisation edited +
BlackBoxEvent edited +
ReactionlikeEvent edited +
CellLineagePath edited +
PhysicalEntity edited +
FailedReaction edited +
OtherEntity edited +
Cell edited +
EntityWithAccessionedSequence edited +
_Deleted replacementInstances +
Depolymerisation revised +
ReactionlikeEvent revised +
BlackBoxEvent revised +
Complex revised +
DefinedSet revised +
Drug revised +
GenomeEncodedEntity revised +
OtherEntity revised +
Cell revised +
EntityWithAccessionedSequence revised +
CellLineagePath revised +
FailedReaction revised +
PhysicalEntity revised +
Polymerisation revised +
CandidateSet revised +
CellDevelopmentStep revised +
Reaction revised +
ChemicalDrug revised +
SimpleEntity revised +
Event revised +
InteractionEvent revised +
ProteinDrug revised +
RNADrug revised +
Polymer revised +
EntitySet revised +
Pathway revised +
ChemicalDrug authored 1
EntitySet authored 1
Pathway authored +
Event authored +
InteractionEvent authored +
SimpleEntity authored 1
RNADrug authored 1
ProteinDrug authored 1
Polymer authored 1
Polymerisation authored +
Reaction authored +
CandidateSet authored 1
CellDevelopmentStep authored +
OtherEntity authored 1
EntityWithAccessionedSequence authored 1
Cell authored 1
PhysicalEntity authored 1
FailedReaction authored +
CellLineagePath authored +
ReactionlikeEvent authored +
BlackBoxEvent authored +
Depolymerisation authored +
Drug authored 1
GenomeEncodedEntity authored 1
Complex authored 1
DefinedSet authored 1
Polymerisation reviewed +
CandidateSet reviewed +
CellDevelopmentStep reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
RNADrug reviewed +
Polymer reviewed +
ProteinDrug reviewed +
SimpleEntity reviewed +
Event reviewed +
InteractionEvent reviewed +
Pathway reviewed +
EntitySet reviewed +
Depolymerisation reviewed +
BlackBoxEvent reviewed +
ReactionlikeEvent reviewed +
DefinedSet reviewed +
Complex reviewed +
GenomeEncodedEntity reviewed +
Drug reviewed +
OtherEntity reviewed +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
InterChainCrosslinkedResidue modified +
Drug modified +
NegativePrecedingEventReason modified +
Regulation modified +
DefinedSet modified +
TranscriptionalModification modified +
Book modified +
ReferenceSequence modified +
CellLineagePath modified +
Publication modified +
CrosslinkedResidue modified +
Species modified +
Disease modified +
GO_MolecularFunction modified +
Anatomy modified +
EntityFunctionalStatus modified +
IntraChainCrosslinkedResidue modified +
ReferenceIsoform modified +
Summation modified +
EntitySet modified +
StableIdentifierHistory modified +
SimpleEntity modified +
ProteinDrug modified +
RNADrug modified +
DrugActionType modified +
InstanceEdit modified +
PathwayDiagram modified +
PsiMod modified +
ControlledVocabulary modified +
ReferenceEntity modified +
ReplacedResidue modified +
PositiveRegulation modified +
Taxon modified +
NegativePrecedingEvent modified +
StableIdentifier modified +
ReferenceGeneProduct modified +
DeletedControlledVocabulary modified +
AbstractModifiedResidue modified +
TranslationalModification modified +
CellType modified +
GeneticallyModifiedResidue modified +
GO_BiologicalProcess modified +
FrontPage modified +
CandidateSet modified +
Requirement modified +
ReferenceGroup modified +
GO_CellularComponent modified +
InteractionEvent modified +
Polymer modified +
ChemicalDrug modified +
ReferenceDatabase modified +
URL modified +
StableIdentifierReleaseStatus modified +
GenomeEncodedEntity modified +
Complex modified +
_Deleted modified +
FunctionalStatusType modified +
_Release modified +
FailedReaction modified +
GroupModifiedResidue modified +
MarkerReference modified +
ModifiedResidue modified +
NegativeGeneExpressionRegulation modified +
FragmentReplacedModification modified +
ControlReference modified +
_UpdateTracker modified +
PhysicalEntityCellType modified +
ReferenceTherapeutic modified +
OtherEntity modified +
EntityWithAccessionedSequence modified +
ReactionType modified +
_DeletedInstance modified +
CellDevelopmentStep modified +
RetractionStatus modified +
Pathway modified +
NegativeRegulation modified +
ReferenceRNASequence modified +
ModifiedNucleotide modified +
ReferenceMolecule modified +
EvidenceType modified +
DatabaseIdentifier modified +
LiteratureReference modified +
ReactionlikeEvent modified +
BlackBoxEvent modified +
Depolymerisation modified +
Affiliation modified +
Person modified +
DatabaseObject modified +
PhysicalEntity modified +
ExternalOntology modified +
PositiveGeneExpressionRegulation modified +
Figure modified +
CatalystActivityReference modified +
NonsenseMutation modified +
ReviewStatus modified +
Cell modified +
Reaction modified +
RegulationReference modified +
Polymerisation modified +
FragmentInsertionModification modified +
Compartment modified +
FragmentModification modified +
SequenceOntology modified +
ReferenceDNASequence modified +
Event modified +
CatalystActivity modified +
FunctionalStatus modified +
FragmentDeletionModification modified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Pathway structureModified +
CellLineagePath structureModified +
Event structureModified +
InteractionEvent structureModified +
TranscriptionalModification created 1
Book created 1
Regulation created 1
DefinedSet created 1
NegativePrecedingEventReason created 1
Drug created 1
InterChainCrosslinkedResidue created 1
Species created 1
Publication created 1
CrosslinkedResidue created 1
ReferenceSequence created 1
CellLineagePath created 1
Summation created 1
ReferenceIsoform created 1
IntraChainCrosslinkedResidue created 1
EntityFunctionalStatus created 1
GO_MolecularFunction created 1
Anatomy created 1
Disease created 1
PathwayDiagram created 1
PsiMod created 1
InstanceEdit created 1
DrugActionType created 1
RNADrug created 1
ProteinDrug created 1
SimpleEntity created 1
StableIdentifierHistory created 1
EntitySet created 1
StableIdentifier created 1
NegativePrecedingEvent created 1
PositiveRegulation created 1
Taxon created 1
ReplacedResidue created 1
ReferenceEntity created 1
ControlledVocabulary created 1
GO_BiologicalProcess created 1
GeneticallyModifiedResidue created 1
CellType created 1
TranslationalModification created 1
AbstractModifiedResidue created 1
DeletedControlledVocabulary created 1
ReferenceGeneProduct created 1
ReferenceGroup created 1
Requirement created 1
CandidateSet created 1
FrontPage created 1
URL created 1
ReferenceDatabase created 1
ChemicalDrug created 1
Polymer created 1
InteractionEvent created 1
GO_CellularComponent created 1
_Release created 1
_Deleted created 1
FunctionalStatusType created 1
Complex created 1
GenomeEncodedEntity created 1
StableIdentifierReleaseStatus created 1
OtherEntity created 1
EntityWithAccessionedSequence created 1
ReferenceTherapeutic created 1
PhysicalEntityCellType created 1
ControlReference created 1
_UpdateTracker created 1
FragmentReplacedModification created 1
NegativeGeneExpressionRegulation created 1
ModifiedResidue created 1
MarkerReference created 1
FailedReaction created 1
GroupModifiedResidue created 1
CellDevelopmentStep created 1
_DeletedInstance created 1
ReactionType created 1
ReferenceRNASequence created 1
NegativeRegulation created 1
Pathway created 1
RetractionStatus created 1
Affiliation created 1
Person created 1
Depolymerisation created 1
BlackBoxEvent created 1
ReactionlikeEvent created 1
EvidenceType created 1
DatabaseIdentifier created 1
LiteratureReference created 1
ReferenceMolecule created 1
ModifiedNucleotide created 1
ReviewStatus created 1
Cell created 1
CatalystActivityReference created 1
NonsenseMutation created 1
Figure created 1
PositiveGeneExpressionRegulation created 1
ExternalOntology created 1
PhysicalEntity created 1
DatabaseObject created 1
Compartment created 1
FragmentInsertionModification created 1
Polymerisation created 1
Reaction created 1
RegulationReference created 1
FragmentDeletionModification created 1
FunctionalStatus created 1
CatalystActivity created 1
Event created 1
SequenceOntology created 1
ReferenceDNASequence created 1
FragmentModification created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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