Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ExternalOntology modified +
CrosslinkedResidue modified +
ReferenceMolecule modified +
Complex modified +
PhysicalEntity modified +
_UpdateTracker modified +
ReviewStatus modified +
StableIdentifierReleaseStatus modified +
Drug modified +
ReactionType modified +
DeletedControlledVocabulary modified +
ReferenceGeneProduct modified +
CatalystActivityReference modified +
ReferenceDNASequence modified +
GO_MolecularFunction modified +
RNADrug modified +
StableIdentifier modified +
ControlReference modified +
Figure modified +
NegativeRegulation modified +
FragmentInsertionModification modified +
Taxon modified +
ReferenceDatabase modified +
GroupModifiedResidue modified +
ChemicalDrug modified +
MarkerReference modified +
Disease modified +
EntityFunctionalStatus modified +
_DeletedInstance modified +
Cell modified +
ReferenceTherapeutic modified +
Summation modified +
URL modified +
GeneticallyModifiedResidue modified +
GenomeEncodedEntity modified +
ControlledVocabulary modified +
Person modified +
PsiMod modified +
AbstractModifiedResidue modified +
InstanceEdit modified +
TranslationalModification modified +
Reaction modified +
OtherEntity modified +
GO_BiologicalProcess modified +
StableIdentifierHistory modified +
ModifiedResidue modified +
DrugActionType modified +
IntraChainCrosslinkedResidue modified +
EntitySet modified +
FragmentModification modified +
InterChainCrosslinkedResidue modified +
ReferenceEntity modified +
EntityWithAccessionedSequence modified +
NegativeGeneExpressionRegulation modified +
NegativePrecedingEvent modified +
PositiveGeneExpressionRegulation modified +
Book modified +
PathwayDiagram modified +
SimpleEntity modified +
Affiliation modified +
ReplacedResidue modified +
_Deleted modified +
DatabaseObject modified +
Compartment modified +
NegativePrecedingEventReason modified +
PhysicalEntityCellType modified +
RetractionStatus modified +
CandidateSet modified +
Pathway modified +
NonsenseMutation modified +
ProteinDrug modified +
CatalystActivity modified +
Depolymerisation modified +
Anatomy modified +
_Release modified +
FragmentDeletionModification modified +
TranscriptionalModification modified +
GO_CellularComponent modified +
Publication modified +
DatabaseIdentifier modified +
CellLineagePath modified +
ReferenceGroup modified +
CellType modified +
Species modified +
SequenceOntology modified +
ReferenceIsoform modified +
FrontPage modified +
FragmentReplacedModification modified +
DefinedSet modified +
Event modified +
ReferenceSequence modified +
ReactionlikeEvent modified +
ModifiedNucleotide modified +
ReferenceRNASequence modified +
PositiveRegulation modified +
BlackBoxEvent modified +
Requirement modified +
RegulationReference modified +
InteractionEvent modified +
CellDevelopmentStep modified +
LiteratureReference modified +
FunctionalStatusType modified +
FailedReaction modified +
Polymerisation modified +
FunctionalStatus modified +
Regulation modified +
EvidenceType modified +
Polymer modified +
DefinedSet created 1
FrontPage created 1
FragmentReplacedModification created 1
Event created 1
SequenceOntology created 1
ReferenceIsoform created 1
CellType created 1
Species created 1
CellLineagePath created 1
ReferenceGroup created 1
Regulation created 1
Polymer created 1
EvidenceType created 1
Polymerisation created 1
FailedReaction created 1
FunctionalStatus created 1
LiteratureReference created 1
CellDevelopmentStep created 1
FunctionalStatusType created 1
ReferenceSequence created 1
ModifiedNucleotide created 1
ReactionlikeEvent created 1
Requirement created 1
PositiveRegulation created 1
ReferenceRNASequence created 1
BlackBoxEvent created 1
RegulationReference created 1
InteractionEvent created 1
_Deleted created 1
DatabaseObject created 1
Compartment created 1
NegativePrecedingEventReason created 1
Affiliation created 1
ReplacedResidue created 1
SimpleEntity created 1
ReferenceEntity created 1
EntityWithAccessionedSequence created 1
NegativePrecedingEvent created 1
PositiveGeneExpressionRegulation created 1
NegativeGeneExpressionRegulation created 1
PathwayDiagram created 1
Book created 1
Publication created 1
DatabaseIdentifier created 1
FragmentDeletionModification created 1
TranscriptionalModification created 1
GO_CellularComponent created 1
Pathway created 1
NonsenseMutation created 1
ProteinDrug created 1
CatalystActivity created 1
Anatomy created 1
Depolymerisation created 1
_Release created 1
RetractionStatus created 1
PhysicalEntityCellType created 1
CandidateSet created 1
Person created 1
PsiMod created 1
InstanceEdit created 1
AbstractModifiedResidue created 1
GeneticallyModifiedResidue created 1
GenomeEncodedEntity created 1
ControlledVocabulary created 1
Cell created 1
ReferenceTherapeutic created 1
Summation created 1
URL created 1
MarkerReference created 1
Disease created 1
EntityFunctionalStatus created 1
_DeletedInstance created 1
FragmentModification created 1
InterChainCrosslinkedResidue created 1
IntraChainCrosslinkedResidue created 1
EntitySet created 1
OtherEntity created 1
GO_BiologicalProcess created 1
Reaction created 1
ModifiedResidue created 1
StableIdentifierHistory created 1
DrugActionType created 1
TranslationalModification created 1
Drug created 1
ReactionType created 1
DeletedControlledVocabulary created 1
ReferenceGeneProduct created 1
_UpdateTracker created 1
ReviewStatus created 1
StableIdentifierReleaseStatus created 1
CrosslinkedResidue created 1
ReferenceMolecule created 1
Complex created 1
PhysicalEntity created 1
ExternalOntology created 1
Taxon created 1
GroupModifiedResidue created 1
ReferenceDatabase created 1
ChemicalDrug created 1
ControlReference created 1
Figure created 1
NegativeRegulation created 1
FragmentInsertionModification created 1
RNADrug created 1
StableIdentifier created 1
CatalystActivityReference created 1
GO_MolecularFunction created 1
ReferenceDNASequence created 1
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
Cell reviewed +
SimpleEntity reviewed +
PhysicalEntity reviewed +
Complex reviewed +
GenomeEncodedEntity reviewed +
DefinedSet reviewed +
Drug reviewed +
Event reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
ProteinDrug reviewed +
CellDevelopmentStep reviewed +
Pathway reviewed +
OtherEntity reviewed +
RNADrug reviewed +
Reaction reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
Polymerisation reviewed +
EntitySet reviewed +
ChemicalDrug reviewed +
Polymer reviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
ChemicalDrug revised +
Polymer revised +
EntitySet revised +
Polymerisation revised +
FailedReaction revised +
Depolymerisation revised +
Reaction revised +
OtherEntity revised +
RNADrug revised +
CellDevelopmentStep revised +
ProteinDrug revised +
Pathway revised +
InteractionEvent revised +
BlackBoxEvent revised +
CandidateSet revised +
ReactionlikeEvent revised +
Event revised +
Drug revised +
DefinedSet revised +
GenomeEncodedEntity revised +
Complex revised +
PhysicalEntity revised +
SimpleEntity revised +
Cell revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
FailedReaction edited +
Polymerisation edited +
EntitySet edited +
ChemicalDrug edited +
Polymer edited +
ReactionlikeEvent edited +
BlackBoxEvent edited +
CandidateSet edited +
InteractionEvent edited +
Pathway edited +
CellDevelopmentStep edited +
ProteinDrug edited +
OtherEntity edited +
RNADrug edited +
Reaction edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
DefinedSet edited +
Drug edited +
Event edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
Cell edited +
SimpleEntity edited +
Complex edited +
PhysicalEntity edited +
FailedReaction structureModified +
Polymerisation structureModified +
Event structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
EntityWithAccessionedSequence authored 1
CellLineagePath authored +
SimpleEntity authored 1
Cell authored 1
PhysicalEntity authored 1
Complex authored 1
GenomeEncodedEntity authored 1
DefinedSet authored 1
Event authored +
Drug authored 1
ReactionlikeEvent authored +
InteractionEvent authored +
CandidateSet authored 1
BlackBoxEvent authored +
Reaction authored +
OtherEntity authored 1
RNADrug authored 1
CellDevelopmentStep authored +
Pathway authored +
ProteinDrug authored 1
Depolymerisation authored +
EntitySet authored 1
FailedReaction authored +
Polymerisation authored +
Polymer authored 1
ChemicalDrug authored 1
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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