Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymerisation edited +
Complex edited +
SimpleEntity edited +
Depolymerisation edited +
Pathway edited +
EntitySet edited +
Event edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
Drug edited +
RNADrug edited +
ChemicalDrug edited +
PhysicalEntity edited +
DefinedSet edited +
Polymer edited +
OtherEntity edited +
CellLineagePath edited +
Reaction edited +
FailedReaction edited +
ProteinDrug edited +
CellDevelopmentStep edited +
BlackBoxEvent edited +
InteractionEvent edited +
GenomeEncodedEntity edited +
Cell edited +
ReactionlikeEvent edited +
_Deleted replacementInstances +
CatalystActivity modified +
GO_CellularComponent modified +
NegativeRegulation modified +
ReferenceSequence modified +
Requirement modified +
RetractionStatus modified +
ControlReference modified +
FunctionalStatusType modified +
ReferenceGeneProduct modified +
Polymer modified +
_UpdateTracker modified +
GroupModifiedResidue modified +
Person modified +
DefinedSet modified +
PhysicalEntity modified +
Summation modified +
EntityWithAccessionedSequence modified +
Drug modified +
NonsenseMutation modified +
RNADrug modified +
FragmentModification modified +
ReplacedResidue modified +
SequenceOntology modified +
ReferenceMolecule modified +
CrosslinkedResidue modified +
Cell modified +
Anatomy modified +
ReferenceDatabase modified +
Taxon modified +
PathwayDiagram modified +
Book modified +
CandidateSet modified +
Event modified +
FragmentReplacedModification modified +
StableIdentifierReleaseStatus modified +
FragmentInsertionModification modified +
InterChainCrosslinkedResidue modified +
OtherEntity modified +
ReviewStatus modified +
AbstractModifiedResidue modified +
ChemicalDrug modified +
DatabaseIdentifier modified +
GeneticallyModifiedResidue modified +
CatalystActivityReference modified +
FailedReaction modified +
TranscriptionalModification modified +
DrugActionType modified +
URL modified +
ReactionlikeEvent modified +
EvidenceType modified +
ReferenceDNASequence modified +
IntraChainCrosslinkedResidue modified +
Publication modified +
GenomeEncodedEntity modified +
_DeletedInstance modified +
FunctionalStatus modified +
Compartment modified +
GO_MolecularFunction modified +
InstanceEdit modified +
EntitySet modified +
_Deleted modified +
ModifiedNucleotide modified +
Pathway modified +
SimpleEntity modified +
ControlledVocabulary modified +
_Release modified +
Figure modified +
GO_BiologicalProcess modified +
ReactionType modified +
DatabaseObject modified +
ReferenceIsoform modified +
CellLineagePath modified +
StableIdentifier modified +
MarkerReference modified +
Species modified +
DeletedControlledVocabulary modified +
ReferenceEntity modified +
PhysicalEntityCellType modified +
TranslationalModification modified +
NegativePrecedingEventReason modified +
Reaction modified +
ReferenceTherapeutic modified +
PsiMod modified +
FrontPage modified +
LiteratureReference modified +
Regulation modified +
ModifiedResidue modified +
ReferenceGroup modified +
Disease modified +
StableIdentifierHistory modified +
Depolymerisation modified +
NegativePrecedingEvent modified +
Complex modified +
RegulationReference modified +
Polymerisation modified +
ExternalOntology modified +
PositiveGeneExpressionRegulation modified +
BlackBoxEvent modified +
Affiliation modified +
ProteinDrug modified +
CellDevelopmentStep modified +
NegativeGeneExpressionRegulation modified +
EntityFunctionalStatus modified +
FragmentDeletionModification modified +
CellType modified +
ReferenceRNASequence modified +
InteractionEvent modified +
PositiveRegulation modified +
BlackBoxEvent revised +
CellDevelopmentStep revised +
ProteinDrug revised +
FailedReaction revised +
Reaction revised +
ReactionlikeEvent revised +
Cell revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
CandidateSet revised +
Event revised +
EntitySet revised +
Pathway revised +
SimpleEntity revised +
Depolymerisation revised +
Complex revised +
Polymerisation revised +
CellLineagePath revised +
Polymer revised +
OtherEntity revised +
DefinedSet revised +
PhysicalEntity revised +
ChemicalDrug revised +
Drug revised +
EntityWithAccessionedSequence revised +
RNADrug revised +
BlackBoxEvent reviewed +
ProteinDrug reviewed +
CellDevelopmentStep reviewed +
FailedReaction reviewed +
Reaction reviewed +
ReactionlikeEvent reviewed +
Cell reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
CandidateSet reviewed +
EntitySet reviewed +
Event reviewed +
Pathway reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
Polymerisation reviewed +
Complex reviewed +
CellLineagePath reviewed +
OtherEntity reviewed +
Polymer reviewed +
DefinedSet reviewed +
ChemicalDrug reviewed +
PhysicalEntity reviewed +
EntityWithAccessionedSequence reviewed +
RNADrug reviewed +
Drug reviewed +
FragmentDeletionModification created 1
CellType created 1
EntityFunctionalStatus created 1
InteractionEvent created 1
PositiveRegulation created 1
ReferenceRNASequence created 1
Affiliation created 1
ProteinDrug created 1
CellDevelopmentStep created 1
BlackBoxEvent created 1
NegativeGeneExpressionRegulation created 1
ExternalOntology created 1
PositiveGeneExpressionRegulation created 1
Disease created 1
ReferenceGroup created 1
ModifiedResidue created 1
RegulationReference created 1
Complex created 1
Polymerisation created 1
StableIdentifierHistory created 1
Depolymerisation created 1
NegativePrecedingEvent created 1
PsiMod created 1
Regulation created 1
FrontPage created 1
LiteratureReference created 1
TranslationalModification created 1
NegativePrecedingEventReason created 1
ReferenceEntity created 1
PhysicalEntityCellType created 1
ReferenceTherapeutic created 1
Reaction created 1
CellLineagePath created 1
StableIdentifier created 1
DatabaseObject created 1
ReactionType created 1
ReferenceIsoform created 1
DeletedControlledVocabulary created 1
MarkerReference created 1
Species created 1
ModifiedNucleotide created 1
_Deleted created 1
Pathway created 1
Compartment created 1
GO_MolecularFunction created 1
FunctionalStatus created 1
EntitySet created 1
InstanceEdit created 1
_Release created 1
GO_BiologicalProcess created 1
Figure created 1
ControlledVocabulary created 1
SimpleEntity created 1
IntraChainCrosslinkedResidue created 1
Publication created 1
ReactionlikeEvent created 1
EvidenceType created 1
ReferenceDNASequence created 1
GenomeEncodedEntity created 1
_DeletedInstance created 1
GeneticallyModifiedResidue created 1
DatabaseIdentifier created 1
TranscriptionalModification created 1
DrugActionType created 1
URL created 1
CatalystActivityReference created 1
FailedReaction created 1
OtherEntity created 1
InterChainCrosslinkedResidue created 1
ChemicalDrug created 1
ReviewStatus created 1
AbstractModifiedResidue created 1
FragmentReplacedModification created 1
CandidateSet created 1
Event created 1
StableIdentifierReleaseStatus created 1
FragmentInsertionModification created 1
Taxon created 1
Anatomy created 1
Cell created 1
ReferenceDatabase created 1
PathwayDiagram created 1
Book created 1
ReplacedResidue created 1
FragmentModification created 1
ReferenceMolecule created 1
SequenceOntology created 1
CrosslinkedResidue created 1
FunctionalStatusType created 1
ReferenceGeneProduct created 1
Polymer created 1
RetractionStatus created 1
ControlReference created 1
PhysicalEntity created 1
Summation created 1
EntityWithAccessionedSequence created 1
NonsenseMutation created 1
RNADrug created 1
Drug created 1
_UpdateTracker created 1
GroupModifiedResidue created 1
Person created 1
DefinedSet created 1
CatalystActivity created 1
GO_CellularComponent created 1
Requirement created 1
NegativeRegulation created 1
ReferenceSequence created 1
Complex authored 1
Polymerisation authored +
Depolymerisation authored +
SimpleEntity authored 1
Pathway authored +
EntitySet authored 1
Event authored +
CandidateSet authored 1
Drug authored 1
EntityWithAccessionedSequence authored 1
RNADrug authored 1
ChemicalDrug authored 1
PhysicalEntity authored 1
DefinedSet authored 1
Polymer authored 1
OtherEntity authored 1
CellLineagePath authored +
Reaction authored +
FailedReaction authored +
CellDevelopmentStep authored +
ProteinDrug authored 1
BlackBoxEvent authored +
InteractionEvent authored +
GenomeEncodedEntity authored 1
Cell authored 1
ReactionlikeEvent authored +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
Event structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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