Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Complex modified +
IntraChainCrosslinkedResidue modified +
LiteratureReference modified +
ReferenceEntity modified +
SimpleEntity modified +
GO_MolecularFunction modified +
Species modified +
ReferenceIsoform modified +
PositiveGeneExpressionRegulation modified +
InstanceEdit modified +
Pathway modified +
AbstractModifiedResidue modified +
GO_BiologicalProcess modified +
Book modified +
CandidateSet modified +
RetractionStatus modified +
EntityWithAccessionedSequence modified +
Event modified +
Anatomy modified +
NegativePrecedingEventReason modified +
Requirement modified +
NegativePrecedingEvent modified +
FragmentModification modified +
Regulation modified +
StableIdentifierHistory modified +
_Release modified +
Drug modified +
CrosslinkedResidue modified +
Summation modified +
TranslationalModification modified +
BlackBoxEvent modified +
_UpdateTracker modified +
Depolymerisation modified +
MarkerReference modified +
Disease modified +
StableIdentifier modified +
GroupModifiedResidue modified +
ReplacedResidue modified +
Publication modified +
DeletedControlledVocabulary modified +
_DeletedInstance modified +
InteractionEvent modified +
PhysicalEntityCellType modified +
Polymer modified +
Person modified +
ReactionlikeEvent modified +
ExternalOntology modified +
CellLineagePath modified +
_Deleted modified +
ReferenceDNASequence modified +
CatalystActivityReference modified +
ControlledVocabulary modified +
URL modified +
Cell modified +
ReferenceSequence modified +
DefinedSet modified +
RegulationReference modified +
GenomeEncodedEntity modified +
ReferenceRNASequence modified +
FragmentReplacedModification modified +
GeneticallyModifiedResidue modified +
ModifiedResidue modified +
DatabaseIdentifier modified +
ChemicalDrug modified +
CatalystActivity modified +
ReferenceMolecule modified +
ReactionType modified +
ReferenceGeneProduct modified +
NegativeGeneExpressionRegulation modified +
CellType modified +
Taxon modified +
StableIdentifierReleaseStatus modified +
PhysicalEntity modified +
RNADrug modified +
Figure modified +
Compartment modified +
EvidenceType modified +
FunctionalStatusType modified +
Polymerisation modified +
DatabaseObject modified +
FunctionalStatus modified +
FragmentDeletionModification modified +
InterChainCrosslinkedResidue modified +
EntityFunctionalStatus modified +
GO_CellularComponent modified +
EntitySet modified +
ReferenceDatabase modified +
Affiliation modified +
SequenceOntology modified +
FailedReaction modified +
PositiveRegulation modified +
FrontPage modified +
ReferenceTherapeutic modified +
Reaction modified +
DrugActionType modified +
ProteinDrug modified +
OtherEntity modified +
NegativeRegulation modified +
FragmentInsertionModification modified +
NonsenseMutation modified +
PathwayDiagram modified +
TranscriptionalModification modified +
ModifiedNucleotide modified +
PsiMod modified +
ReviewStatus modified +
ControlReference modified +
ReferenceGroup modified +
CellDevelopmentStep modified +
ChemicalDrug reviewed +
Drug reviewed +
Complex reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
Reaction reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
EntitySet reviewed +
FailedReaction reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
Pathway reviewed +
InteractionEvent reviewed +
PhysicalEntity reviewed +
RNADrug reviewed +
EntityWithAccessionedSequence reviewed +
Polymer reviewed +
Event reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
CellDevelopmentStep reviewed +
Cell reviewed +
DefinedSet reviewed +
CellLineagePath reviewed +
Polymerisation reviewed +
_Deleted replacementInstances +
FailedReaction internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
SimpleEntity edited +
GenomeEncodedEntity edited +
Complex edited +
Drug edited +
ChemicalDrug edited +
Depolymerisation edited +
FailedReaction edited +
Pathway edited +
BlackBoxEvent edited +
EntitySet edited +
OtherEntity edited +
ProteinDrug edited +
Reaction edited +
CandidateSet edited +
ReactionlikeEvent edited +
Polymer edited +
Event edited +
EntityWithAccessionedSequence edited +
RNADrug edited +
InteractionEvent edited +
PhysicalEntity edited +
Polymerisation edited +
CellLineagePath edited +
DefinedSet edited +
CellDevelopmentStep edited +
Cell edited +
ProteinDrug authored 1
OtherEntity authored 1
Reaction authored +
FailedReaction authored +
Depolymerisation authored +
Pathway authored +
BlackBoxEvent authored +
EntitySet authored 1
ChemicalDrug authored 1
SimpleEntity authored 1
Complex authored 1
Drug authored 1
GenomeEncodedEntity authored 1
Cell authored 1
CellDevelopmentStep authored +
DefinedSet authored 1
Polymerisation authored +
CellLineagePath authored +
EntityWithAccessionedSequence authored 1
Polymer authored 1
Event authored +
ReactionlikeEvent authored +
InteractionEvent authored +
PhysicalEntity authored 1
RNADrug authored 1
CandidateSet authored 1
ControlReference created 1
ReferenceGroup created 1
CellDevelopmentStep created 1
ReviewStatus created 1
NonsenseMutation created 1
PathwayDiagram created 1
ModifiedNucleotide created 1
PsiMod created 1
TranscriptionalModification created 1
NegativeRegulation created 1
FragmentInsertionModification created 1
FrontPage created 1
ReferenceTherapeutic created 1
Reaction created 1
DrugActionType created 1
ProteinDrug created 1
OtherEntity created 1
ReferenceDatabase created 1
Affiliation created 1
EntitySet created 1
SequenceOntology created 1
FailedReaction created 1
PositiveRegulation created 1
DatabaseObject created 1
FunctionalStatus created 1
FragmentDeletionModification created 1
GO_CellularComponent created 1
InterChainCrosslinkedResidue created 1
EntityFunctionalStatus created 1
FunctionalStatusType created 1
Polymerisation created 1
PhysicalEntity created 1
RNADrug created 1
Figure created 1
Compartment created 1
EvidenceType created 1
StableIdentifierReleaseStatus created 1
Taxon created 1
ReferenceMolecule created 1
ReactionType created 1
ReferenceGeneProduct created 1
NegativeGeneExpressionRegulation created 1
CellType created 1
DatabaseIdentifier created 1
ChemicalDrug created 1
ModifiedResidue created 1
CatalystActivity created 1
RegulationReference created 1
GenomeEncodedEntity created 1
ReferenceRNASequence created 1
FragmentReplacedModification created 1
GeneticallyModifiedResidue created 1
URL created 1
Cell created 1
DefinedSet created 1
ReferenceSequence created 1
CellLineagePath created 1
_Deleted created 1
ReferenceDNASequence created 1
ControlledVocabulary created 1
CatalystActivityReference created 1
_DeletedInstance created 1
InteractionEvent created 1
PhysicalEntityCellType created 1
Person created 1
Polymer created 1
ReactionlikeEvent created 1
ExternalOntology created 1
GroupModifiedResidue created 1
ReplacedResidue created 1
Publication created 1
DeletedControlledVocabulary created 1
Disease created 1
StableIdentifier created 1
TranslationalModification created 1
Depolymerisation created 1
_UpdateTracker created 1
BlackBoxEvent created 1
MarkerReference created 1
Summation created 1
Drug created 1
CrosslinkedResidue created 1
FragmentModification created 1
Regulation created 1
StableIdentifierHistory created 1
_Release created 1
Anatomy created 1
NegativePrecedingEventReason created 1
Requirement created 1
NegativePrecedingEvent created 1
RetractionStatus created 1
Event created 1
EntityWithAccessionedSequence created 1
Book created 1
CandidateSet created 1
AbstractModifiedResidue created 1
GO_BiologicalProcess created 1
InstanceEdit created 1
Pathway created 1
ReferenceIsoform created 1
PositiveGeneExpressionRegulation created 1
Complex created 1
IntraChainCrosslinkedResidue created 1
LiteratureReference created 1
SimpleEntity created 1
ReferenceEntity created 1
GO_MolecularFunction created 1
Species created 1
CandidateSet revised +
InteractionEvent revised +
PhysicalEntity revised +
RNADrug revised +
Polymer revised +
Event revised +
EntityWithAccessionedSequence revised +
ReactionlikeEvent revised +
CellLineagePath revised +
Polymerisation revised +
Cell revised +
CellDevelopmentStep revised +
DefinedSet revised +
Drug revised +
Complex revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
ChemicalDrug revised +
EntitySet revised +
BlackBoxEvent revised +
FailedReaction revised +
Depolymerisation revised +
Pathway revised +
Reaction revised +
ProteinDrug revised +
OtherEntity revised +
InteractionEvent structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
Pathway structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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