Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Reaction authored +
InteractionEvent authored +
CellDevelopmentStep authored +
Cell authored 1
ReactionlikeEvent authored +
EntityWithAccessionedSequence authored 1
EntitySet authored 1
ChemicalDrug authored 1
Polymer authored 1
Polymerisation authored +
Complex authored 1
GenomeEncodedEntity authored 1
BlackBoxEvent authored +
CandidateSet authored 1
DefinedSet authored 1
ProteinDrug authored 1
Drug authored 1
Depolymerisation authored +
FailedReaction authored +
Event authored +
SimpleEntity authored 1
PhysicalEntity authored 1
Pathway authored +
CellLineagePath authored +
OtherEntity authored 1
RNADrug authored 1
CatalystActivity created 1
Anatomy created 1
MarkerReference created 1
Requirement created 1
LiteratureReference created 1
NegativePrecedingEvent created 1
IntraChainCrosslinkedResidue created 1
CrosslinkedResidue created 1
ReferenceEntity created 1
_UpdateTracker created 1
NegativeGeneExpressionRegulation created 1
_Release created 1
FragmentModification created 1
ReactionType created 1
GroupModifiedResidue created 1
AbstractModifiedResidue created 1
DeletedControlledVocabulary created 1
EntityFunctionalStatus created 1
FunctionalStatusType created 1
Drug created 1
StableIdentifierReleaseStatus created 1
SequenceOntology created 1
_Deleted created 1
NegativePrecedingEventReason created 1
ReferenceGeneProduct created 1
PsiMod created 1
InteractionEvent created 1
FragmentDeletionModification created 1
Regulation created 1
CellDevelopmentStep created 1
Disease created 1
ChemicalDrug created 1
RetractionStatus created 1
Taxon created 1
Complex created 1
ReferenceDNASequence created 1
GenomeEncodedEntity created 1
_DeletedInstance created 1
Affiliation created 1
ReferenceSequence created 1
ControlledVocabulary created 1
DefinedSet created 1
ControlReference created 1
CatalystActivityReference created 1
ReferenceGroup created 1
TranslationalModification created 1
DrugActionType created 1
PhysicalEntityCellType created 1
Depolymerisation created 1
SimpleEntity created 1
GO_BiologicalProcess created 1
Summation created 1
CellLineagePath created 1
GO_MolecularFunction created 1
PathwayDiagram created 1
RNADrug created 1
FunctionalStatus created 1
ReferenceIsoform created 1
NegativeRegulation created 1
ReactionlikeEvent created 1
Book created 1
Cell created 1
EntitySet created 1
ReviewStatus created 1
DatabaseObject created 1
ModifiedResidue created 1
URL created 1
FragmentInsertionModification created 1
FragmentReplacedModification created 1
StableIdentifierHistory created 1
TranscriptionalModification created 1
StableIdentifier created 1
ReplacedResidue created 1
ReferenceTherapeutic created 1
EvidenceType created 1
GO_CellularComponent created 1
Species created 1
FrontPage created 1
ReferenceRNASequence created 1
Reaction created 1
CellType created 1
InstanceEdit created 1
PositiveRegulation created 1
DatabaseIdentifier created 1
PositiveGeneExpressionRegulation created 1
EntityWithAccessionedSequence created 1
RegulationReference created 1
Polymer created 1
InterChainCrosslinkedResidue created 1
ModifiedNucleotide created 1
Polymerisation created 1
ExternalOntology created 1
NonsenseMutation created 1
BlackBoxEvent created 1
ReferenceMolecule created 1
ReferenceDatabase created 1
CandidateSet created 1
ProteinDrug created 1
Publication created 1
FailedReaction created 1
Compartment created 1
Person created 1
PhysicalEntity created 1
Event created 1
Pathway created 1
GeneticallyModifiedResidue created 1
Figure created 1
OtherEntity created 1
ProteinDrug revised +
Drug revised +
Depolymerisation revised +
FailedReaction revised +
BlackBoxEvent revised +
CandidateSet revised +
DefinedSet revised +
CellLineagePath revised +
OtherEntity revised +
RNADrug revised +
SimpleEntity revised +
Event revised +
PhysicalEntity revised +
Pathway revised +
Cell revised +
ReactionlikeEvent revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
InteractionEvent revised +
Reaction revised +
CellDevelopmentStep revised +
Polymerisation revised +
Complex revised +
GenomeEncodedEntity revised +
ChemicalDrug revised +
Polymer revised +
PhysicalEntity edited +
SimpleEntity edited +
Event edited +
Pathway edited +
CellLineagePath edited +
RNADrug edited +
OtherEntity edited +
BlackBoxEvent edited +
DefinedSet edited +
CandidateSet edited +
ProteinDrug edited +
Drug edited +
FailedReaction edited +
Depolymerisation edited +
ChemicalDrug edited +
Polymer edited +
Complex edited +
Polymerisation edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
Reaction edited +
CellDevelopmentStep edited +
Cell edited +
ReactionlikeEvent edited +
EntitySet edited +
EntityWithAccessionedSequence edited +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
_Deleted replacementInstances +
CandidateSet reviewed +
DefinedSet reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
Drug reviewed +
ProteinDrug reviewed +
Pathway reviewed +
SimpleEntity reviewed +
Event reviewed +
PhysicalEntity reviewed +
RNADrug reviewed +
OtherEntity reviewed +
CellLineagePath reviewed +
CellDevelopmentStep reviewed +
InteractionEvent reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
EntitySet reviewed +
Cell reviewed +
ReactionlikeEvent reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
GenomeEncodedEntity reviewed +
Polymerisation reviewed +
Complex reviewed +
Polymerisation structureModified +
CellLineagePath structureModified +
Pathway structureModified +
Event structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Reaction structureModified +
FunctionalStatus modified +
RNADrug modified +
CellLineagePath modified +
GO_MolecularFunction modified +
PathwayDiagram modified +
Summation modified +
GO_BiologicalProcess modified +
SimpleEntity modified +
TranslationalModification modified +
DrugActionType modified +
Depolymerisation modified +
PhysicalEntityCellType modified +
CatalystActivityReference modified +
ReferenceGroup modified +
DefinedSet modified +
ControlReference modified +
ReferenceSequence modified +
Affiliation modified +
ControlledVocabulary modified +
GenomeEncodedEntity modified +
ReferenceDNASequence modified +
_DeletedInstance modified +
Complex modified +
Taxon modified +
RetractionStatus modified +
ChemicalDrug modified +
Disease modified +
CellDevelopmentStep modified +
Regulation modified +
InteractionEvent modified +
FragmentDeletionModification modified +
ReferenceGeneProduct modified +
PsiMod modified +
NegativePrecedingEventReason modified +
_Deleted modified +
SequenceOntology modified +
FunctionalStatusType modified +
Drug modified +
StableIdentifierReleaseStatus modified +
AbstractModifiedResidue modified +
EntityFunctionalStatus modified +
DeletedControlledVocabulary modified +
FragmentModification modified +
ReactionType modified +
GroupModifiedResidue modified +
_Release modified +
NegativeGeneExpressionRegulation modified +
_UpdateTracker modified +
CrosslinkedResidue modified +
IntraChainCrosslinkedResidue modified +
ReferenceEntity modified +
LiteratureReference modified +
NegativePrecedingEvent modified +
Requirement modified +
Anatomy modified +
MarkerReference modified +
CatalystActivity modified +
Figure modified +
OtherEntity modified +
GeneticallyModifiedResidue modified +
Pathway modified +
PhysicalEntity modified +
Person modified +
Event modified +
FailedReaction modified +
Compartment modified +
Publication modified +
ProteinDrug modified +
ReferenceDatabase modified +
CandidateSet modified +
ReferenceMolecule modified +
BlackBoxEvent modified +
NonsenseMutation modified +
ExternalOntology modified +
ModifiedNucleotide modified +
Polymerisation modified +
Polymer modified +
InterChainCrosslinkedResidue modified +
PositiveGeneExpressionRegulation modified +
RegulationReference modified +
EntityWithAccessionedSequence modified +
DatabaseIdentifier modified +
CellType modified +
Reaction modified +
PositiveRegulation modified +
InstanceEdit modified +
ReferenceRNASequence modified +
FrontPage modified +
Species modified +
GO_CellularComponent modified +
StableIdentifier modified +
ReplacedResidue modified +
TranscriptionalModification modified +
ReferenceTherapeutic modified +
EvidenceType modified +
StableIdentifierHistory modified +
FragmentReplacedModification modified +
URL modified +
FragmentInsertionModification modified +
DatabaseObject modified +
ModifiedResidue modified +
EntitySet modified +
ReviewStatus modified +
Book modified +
Cell modified +
ReactionlikeEvent modified +
NegativeRegulation modified +
ReferenceIsoform modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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