Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Compartment created 1
PhysicalEntity created 1
StableIdentifier created 1
GeneticallyModifiedResidue created 1
FunctionalStatus created 1
DeletedControlledVocabulary created 1
SequenceOntology created 1
ReactionType created 1
ReferenceTherapeutic created 1
SimpleEntity created 1
CellDevelopmentStep created 1
NonsenseMutation created 1
ChemicalDrug created 1
RNADrug created 1
PathwayDiagram created 1
GenomeEncodedEntity created 1
DefinedSet created 1
MarkerReference created 1
PositiveRegulation created 1
CatalystActivity created 1
Affiliation created 1
ExternalOntology created 1
Anatomy created 1
ReplacedResidue created 1
ReviewStatus created 1
NegativeGeneExpressionRegulation created 1
_Deleted created 1
EntitySet created 1
OtherEntity created 1
Drug created 1
EntityFunctionalStatus created 1
Pathway created 1
ReferenceEntity created 1
NegativePrecedingEvent created 1
_UpdateTracker created 1
ReferenceGroup created 1
FragmentModification created 1
PositiveGeneExpressionRegulation created 1
Complex created 1
TranscriptionalModification created 1
InstanceEdit created 1
Publication created 1
ReferenceRNASequence created 1
ModifiedNucleotide created 1
CandidateSet created 1
FragmentDeletionModification created 1
PhysicalEntityCellType created 1
DatabaseIdentifier created 1
Figure created 1
TranslationalModification created 1
FailedReaction created 1
Book created 1
Depolymerisation created 1
Event created 1
URL created 1
IntraChainCrosslinkedResidue created 1
ReferenceMolecule created 1
ControlReference created 1
CatalystActivityReference created 1
NegativeRegulation created 1
Disease created 1
Reaction created 1
FrontPage created 1
Taxon created 1
StableIdentifierReleaseStatus created 1
ReferenceDatabase created 1
NegativePrecedingEventReason created 1
FunctionalStatusType created 1
Regulation created 1
InteractionEvent created 1
FragmentReplacedModification created 1
Polymer created 1
PsiMod created 1
BlackBoxEvent created 1
ReferenceGeneProduct created 1
RegulationReference created 1
Summation created 1
ReferenceSequence created 1
_DeletedInstance created 1
StableIdentifierHistory created 1
FragmentInsertionModification created 1
GO_CellularComponent created 1
GO_BiologicalProcess created 1
Species created 1
Requirement created 1
ReactionlikeEvent created 1
CrosslinkedResidue created 1
CellLineagePath created 1
GO_MolecularFunction created 1
ReferenceDNASequence created 1
Cell created 1
ControlledVocabulary created 1
LiteratureReference created 1
InterChainCrosslinkedResidue created 1
Person created 1
CellType created 1
DatabaseObject created 1
RetractionStatus created 1
DrugActionType created 1
ProteinDrug created 1
Polymerisation created 1
AbstractModifiedResidue created 1
ModifiedResidue created 1
ReferenceIsoform created 1
EntityWithAccessionedSequence created 1
_Release created 1
GroupModifiedResidue created 1
EvidenceType created 1
_Deleted replacementInstances +
Polymerisation reviewed +
FailedReaction reviewed +
BlackBoxEvent reviewed +
EntityWithAccessionedSequence reviewed +
Depolymerisation reviewed +
Event reviewed +
EntitySet reviewed +
OtherEntity reviewed +
Drug reviewed +
CandidateSet reviewed +
InteractionEvent reviewed +
Polymer reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
Reaction reviewed +
Complex reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
Cell reviewed +
GenomeEncodedEntity reviewed +
DefinedSet reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
ReactionlikeEvent reviewed +
SimpleEntity reviewed +
CellDevelopmentStep reviewed +
Polymer edited +
ProteinDrug edited +
CandidateSet edited +
InteractionEvent edited +
EntitySet edited +
Event edited +
Drug edited +
OtherEntity edited +
BlackBoxEvent edited +
Polymerisation edited +
FailedReaction edited +
Depolymerisation edited +
EntityWithAccessionedSequence edited +
ReactionlikeEvent edited +
SimpleEntity edited +
CellDevelopmentStep edited +
PhysicalEntity edited +
Pathway edited +
Cell edited +
DefinedSet edited +
GenomeEncodedEntity edited +
Reaction edited +
CellLineagePath edited +
RNADrug edited +
ChemicalDrug edited +
Complex edited +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
Pathway structureModified +
Event structureModified +
Depolymerisation structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Depolymerisation revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
Polymerisation revised +
FailedReaction revised +
Drug revised +
OtherEntity revised +
EntitySet revised +
Event revised +
InteractionEvent revised +
CandidateSet revised +
ProteinDrug revised +
Polymer revised +
Complex revised +
RNADrug revised +
ChemicalDrug revised +
Reaction revised +
CellLineagePath revised +
GenomeEncodedEntity revised +
DefinedSet revised +
Cell revised +
Pathway revised +
PhysicalEntity revised +
SimpleEntity revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
PhysicalEntity authored 1
Pathway authored +
ReactionlikeEvent authored +
SimpleEntity authored 1
CellDevelopmentStep authored +
CellLineagePath authored +
Reaction authored +
Complex authored 1
ChemicalDrug authored 1
RNADrug authored 1
Cell authored 1
DefinedSet authored 1
GenomeEncodedEntity authored 1
CandidateSet authored 1
InteractionEvent authored +
Polymer authored 1
ProteinDrug authored 1
Polymerisation authored +
FailedReaction authored +
BlackBoxEvent authored +
EntityWithAccessionedSequence authored 1
Depolymerisation authored +
Event authored +
EntitySet authored 1
OtherEntity authored 1
Drug authored 1
Figure modified +
DatabaseIdentifier modified +
FragmentDeletionModification modified +
PhysicalEntityCellType modified +
CandidateSet modified +
IntraChainCrosslinkedResidue modified +
URL modified +
Event modified +
Depolymerisation modified +
Book modified +
FailedReaction modified +
TranslationalModification modified +
FragmentModification modified +
ReferenceGroup modified +
_UpdateTracker modified +
NegativePrecedingEvent modified +
ReferenceEntity modified +
Pathway modified +
EntityFunctionalStatus modified +
ModifiedNucleotide modified +
ReferenceRNASequence modified +
Publication modified +
InstanceEdit modified +
PositiveGeneExpressionRegulation modified +
TranscriptionalModification modified +
Complex modified +
ExternalOntology modified +
Affiliation modified +
CatalystActivity modified +
PositiveRegulation modified +
MarkerReference modified +
Drug modified +
OtherEntity modified +
_Deleted modified +
NegativeGeneExpressionRegulation modified +
EntitySet modified +
ReviewStatus modified +
ReplacedResidue modified +
Anatomy modified +
SimpleEntity modified +
CellDevelopmentStep modified +
ReferenceTherapeutic modified +
ReactionType modified +
DeletedControlledVocabulary modified +
SequenceOntology modified +
FunctionalStatus modified +
GeneticallyModifiedResidue modified +
StableIdentifier modified +
PhysicalEntity modified +
Compartment modified +
DefinedSet modified +
GenomeEncodedEntity modified +
PathwayDiagram modified +
RNADrug modified +
ChemicalDrug modified +
NonsenseMutation modified +
ProteinDrug modified +
DrugActionType modified +
RetractionStatus modified +
CellType modified +
DatabaseObject modified +
Person modified +
InterChainCrosslinkedResidue modified +
EvidenceType modified +
GroupModifiedResidue modified +
_Release modified +
ReferenceIsoform modified +
EntityWithAccessionedSequence modified +
AbstractModifiedResidue modified +
ModifiedResidue modified +
Polymerisation modified +
ReactionlikeEvent modified +
Requirement modified +
Species modified +
GO_CellularComponent modified +
FragmentInsertionModification modified +
GO_BiologicalProcess modified +
LiteratureReference modified +
ControlledVocabulary modified +
Cell modified +
ReferenceDNASequence modified +
GO_MolecularFunction modified +
CrosslinkedResidue modified +
CellLineagePath modified +
PsiMod modified +
FragmentReplacedModification modified +
Polymer modified +
InteractionEvent modified +
Regulation modified +
NegativePrecedingEventReason modified +
FunctionalStatusType modified +
ReferenceDatabase modified +
StableIdentifierHistory modified +
_DeletedInstance modified +
ReferenceSequence modified +
Summation modified +
RegulationReference modified +
ReferenceGeneProduct modified +
BlackBoxEvent modified +
NegativeRegulation modified +
Disease modified +
CatalystActivityReference modified +
ControlReference modified +
ReferenceMolecule modified +
StableIdentifierReleaseStatus modified +
Taxon modified +
FrontPage modified +
Reaction modified +
Event internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

Follow Reactome