Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent created 1
ReferenceDNASequence created 1
ProteinDrug created 1
PathwayDiagram created 1
ModifiedNucleotide created 1
_Deleted created 1
Compartment created 1
NegativePrecedingEvent created 1
LiteratureReference created 1
Disease created 1
CrosslinkedResidue created 1
GeneticallyModifiedResidue created 1
FailedReaction created 1
ReferenceEntity created 1
Polymer created 1
_Release created 1
DrugActionType created 1
NegativeRegulation created 1
CellLineagePath created 1
ModifiedResidue created 1
TranslationalModification created 1
Figure created 1
ReferenceSequence created 1
ControlledVocabulary created 1
FunctionalStatusType created 1
DatabaseObject created 1
ExternalOntology created 1
SequenceOntology created 1
FunctionalStatus created 1
DeletedControlledVocabulary created 1
ReferenceGroup created 1
MarkerReference created 1
DefinedSet created 1
ReferenceGeneProduct created 1
Requirement created 1
Book created 1
BlackBoxEvent created 1
Cell created 1
Publication created 1
EntityFunctionalStatus created 1
RNADrug created 1
PsiMod created 1
InteractionEvent created 1
NonsenseMutation created 1
ReferenceTherapeutic created 1
ReferenceIsoform created 1
ReferenceMolecule created 1
Summation created 1
PositiveRegulation created 1
GO_BiologicalProcess created 1
RegulationReference created 1
URL created 1
RetractionStatus created 1
FragmentReplacedModification created 1
ReviewStatus created 1
ChemicalDrug created 1
StableIdentifier created 1
GroupModifiedResidue created 1
GO_CellularComponent created 1
_DeletedInstance created 1
Person created 1
EntitySet created 1
Polymerisation created 1
PhysicalEntity created 1
NegativeGeneExpressionRegulation created 1
InstanceEdit created 1
EvidenceType created 1
Event created 1
StableIdentifierHistory created 1
AbstractModifiedResidue created 1
Reaction created 1
NegativePrecedingEventReason created 1
FragmentModification created 1
Affiliation created 1
CellType created 1
EntityWithAccessionedSequence created 1
ReactionType created 1
InterChainCrosslinkedResidue created 1
ReplacedResidue created 1
FragmentDeletionModification created 1
Species created 1
Anatomy created 1
FrontPage created 1
CellDevelopmentStep created 1
IntraChainCrosslinkedResidue created 1
ReferenceDatabase created 1
CatalystActivityReference created 1
DatabaseIdentifier created 1
CatalystActivity created 1
TranscriptionalModification created 1
Drug created 1
GO_MolecularFunction created 1
OtherEntity created 1
Complex created 1
FragmentInsertionModification created 1
GenomeEncodedEntity created 1
Taxon created 1
PositiveGeneExpressionRegulation created 1
_UpdateTracker created 1
ReferenceRNASequence created 1
SimpleEntity created 1
Pathway created 1
ControlReference created 1
PhysicalEntityCellType created 1
Regulation created 1
StableIdentifierReleaseStatus created 1
Depolymerisation created 1
CandidateSet created 1
EntityWithAccessionedSequence revised +
Depolymerisation revised +
CandidateSet revised +
DefinedSet revised +
ChemicalDrug revised +
CellDevelopmentStep revised +
CellLineagePath revised +
Pathway revised +
SimpleEntity revised +
Cell revised +
Drug revised +
Event revised +
OtherEntity revised +
FailedReaction revised +
Complex revised +
RNADrug revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
Polymer revised +
Reaction revised +
ReactionlikeEvent revised +
EntitySet revised +
Polymerisation revised +
BlackBoxEvent revised +
PhysicalEntity revised +
ProteinDrug revised +
CellLineagePath authored +
Pathway authored +
SimpleEntity authored 1
EntityWithAccessionedSequence authored 1
Depolymerisation authored +
CandidateSet authored 1
ChemicalDrug authored 1
DefinedSet authored 1
CellDevelopmentStep authored +
ReactionlikeEvent authored +
EntitySet authored 1
Polymerisation authored +
BlackBoxEvent authored +
PhysicalEntity authored 1
ProteinDrug authored 1
Cell authored 1
Drug authored 1
Event authored +
OtherEntity authored 1
FailedReaction authored +
Complex authored 1
RNADrug authored 1
Polymer authored 1
InteractionEvent authored +
GenomeEncodedEntity authored 1
Reaction authored +
DatabaseObject modified +
ExternalOntology modified +
SequenceOntology modified +
FunctionalStatus modified +
ControlledVocabulary modified +
FunctionalStatusType modified +
MarkerReference modified +
DefinedSet modified +
ReferenceGroup modified +
DeletedControlledVocabulary modified +
CellLineagePath modified +
ModifiedResidue modified +
_Release modified +
NegativeRegulation modified +
DrugActionType modified +
Figure modified +
ReferenceSequence modified +
TranslationalModification modified +
NegativePrecedingEvent modified +
Compartment modified +
LiteratureReference modified +
Disease modified +
ReferenceEntity modified +
Polymer modified +
CrosslinkedResidue modified +
GeneticallyModifiedResidue modified +
FailedReaction modified +
ReferenceDNASequence modified +
ReactionlikeEvent modified +
ModifiedNucleotide modified +
_Deleted modified +
PathwayDiagram modified +
ProteinDrug modified +
URL modified +
StableIdentifier modified +
ChemicalDrug modified +
GroupModifiedResidue modified +
GO_CellularComponent modified +
_DeletedInstance modified +
RetractionStatus modified +
FragmentReplacedModification modified +
ReviewStatus modified +
GO_BiologicalProcess modified +
ReferenceMolecule modified +
ReferenceTherapeutic modified +
ReferenceIsoform modified +
PositiveRegulation modified +
Summation modified +
RegulationReference modified +
Cell modified +
Publication modified +
EntityFunctionalStatus modified +
RNADrug modified +
PsiMod modified +
InteractionEvent modified +
NonsenseMutation modified +
Requirement modified +
ReferenceGeneProduct modified +
Book modified +
BlackBoxEvent modified +
InterChainCrosslinkedResidue modified +
CellType modified +
EntityWithAccessionedSequence modified +
ReactionType modified +
Species modified +
CellDevelopmentStep modified +
FrontPage modified +
Anatomy modified +
ReplacedResidue modified +
FragmentDeletionModification modified +
Affiliation modified +
NegativePrecedingEventReason modified +
FragmentModification modified +
Event modified +
Reaction modified +
StableIdentifierHistory modified +
AbstractModifiedResidue modified +
EntitySet modified +
Person modified +
Polymerisation modified +
NegativeGeneExpressionRegulation modified +
InstanceEdit modified +
EvidenceType modified +
PhysicalEntity modified +
Regulation modified +
PhysicalEntityCellType modified +
StableIdentifierReleaseStatus modified +
Depolymerisation modified +
CandidateSet modified +
_UpdateTracker modified +
ReferenceRNASequence modified +
Taxon modified +
PositiveGeneExpressionRegulation modified +
SimpleEntity modified +
Pathway modified +
ControlReference modified +
Drug modified +
GO_MolecularFunction modified +
OtherEntity modified +
FragmentInsertionModification modified +
GenomeEncodedEntity modified +
Complex modified +
CatalystActivityReference modified +
IntraChainCrosslinkedResidue modified +
ReferenceDatabase modified +
TranscriptionalModification modified +
DatabaseIdentifier modified +
CatalystActivity modified +
Pathway reviewed +
SimpleEntity reviewed +
CellLineagePath reviewed +
CandidateSet reviewed +
Depolymerisation reviewed +
CellDevelopmentStep reviewed +
DefinedSet reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
ProteinDrug reviewed +
PhysicalEntity reviewed +
BlackBoxEvent reviewed +
ReactionlikeEvent reviewed +
EntitySet reviewed +
Polymerisation reviewed +
FailedReaction reviewed +
Complex reviewed +
InteractionEvent reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
Reaction reviewed +
RNADrug reviewed +
OtherEntity reviewed +
Event reviewed +
Cell reviewed +
Drug reviewed +
RNADrug edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
Polymer edited +
Reaction edited +
Complex edited +
FailedReaction edited +
Event edited +
Cell edited +
Drug edited +
OtherEntity edited +
BlackBoxEvent edited +
PhysicalEntity edited +
ProteinDrug edited +
Polymerisation edited +
EntitySet edited +
ReactionlikeEvent edited +
ChemicalDrug edited +
DefinedSet edited +
CellDevelopmentStep edited +
Depolymerisation edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
SimpleEntity edited +
Pathway edited +
CellLineagePath edited +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
CellLineagePath structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
Event structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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