Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
SimpleEntity revised +
CandidateSet revised +
PhysicalEntity revised +
Event revised +
Reaction revised +
OtherEntity revised +
CellLineagePath revised +
FailedReaction revised +
Pathway revised +
ChemicalDrug revised +
Drug revised +
Complex revised +
EntitySet revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
GenomeEncodedEntity revised +
Cell revised +
Polymer revised +
Depolymerisation revised +
BlackBoxEvent revised +
CellDevelopmentStep revised +
Polymerisation revised +
RNADrug revised +
DefinedSet revised +
InteractionEvent revised +
ReactionlikeEvent revised +
CatalystActivity created 1
ReviewStatus created 1
ControlReference created 1
PositiveRegulation created 1
Summation created 1
Regulation created 1
StableIdentifierReleaseStatus created 1
SequenceOntology created 1
RegulationReference created 1
GO_CellularComponent created 1
Publication created 1
SimpleEntity created 1
GO_BiologicalProcess created 1
CatalystActivityReference created 1
BlackBoxEvent created 1
Polymerisation created 1
Taxon created 1
InteractionEvent created 1
PhysicalEntityCellType created 1
ReactionlikeEvent created 1
_Deleted created 1
StableIdentifierHistory created 1
NegativeRegulation created 1
RetractionStatus created 1
GeneticallyModifiedResidue created 1
ProteinDrug created 1
EntityWithAccessionedSequence created 1
OtherEntity created 1
CellLineagePath created 1
DrugActionType created 1
Species created 1
PhysicalEntity created 1
StableIdentifier created 1
CandidateSet created 1
PathwayDiagram created 1
InterChainCrosslinkedResidue created 1
Affiliation created 1
Person created 1
_DeletedInstance created 1
TranscriptionalModification created 1
Requirement created 1
FunctionalStatusType created 1
ReactionType created 1
Figure created 1
ReferenceGeneProduct created 1
ModifiedResidue created 1
Disease created 1
ReferenceMolecule created 1
TranslationalModification created 1
FunctionalStatus created 1
Reaction created 1
Pathway created 1
FailedReaction created 1
EntityFunctionalStatus created 1
GO_MolecularFunction created 1
Event created 1
ReferenceIsoform created 1
ControlledVocabulary created 1
FragmentDeletionModification created 1
AbstractModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
FrontPage created 1
Depolymerisation created 1
Polymer created 1
_UpdateTracker created 1
DatabaseIdentifier created 1
DefinedSet created 1
Anatomy created 1
IntraChainCrosslinkedResidue created 1
NegativePrecedingEventReason created 1
RNADrug created 1
FragmentReplacedModification created 1
GroupModifiedResidue created 1
EntitySet created 1
GenomeEncodedEntity created 1
EvidenceType created 1
ReferenceTherapeutic created 1
ExternalOntology created 1
URL created 1
DeletedControlledVocabulary created 1
PsiMod created 1
ReferenceDNASequence created 1
NegativeGeneExpressionRegulation created 1
ReferenceDatabase created 1
ReferenceEntity created 1
ModifiedNucleotide created 1
NegativePrecedingEvent created 1
Compartment created 1
InstanceEdit created 1
ReplacedResidue created 1
ReferenceGroup created 1
FragmentModification created 1
CrosslinkedResidue created 1
MarkerReference created 1
FragmentInsertionModification created 1
NonsenseMutation created 1
CellDevelopmentStep created 1
CellType created 1
_Release created 1
ReferenceSequence created 1
Book created 1
ReferenceRNASequence created 1
ChemicalDrug created 1
Drug created 1
Complex created 1
Cell created 1
LiteratureReference created 1
DatabaseObject created 1
Polymer edited +
BlackBoxEvent edited +
Depolymerisation edited +
CellDevelopmentStep edited +
Polymerisation edited +
InteractionEvent edited +
DefinedSet edited +
ReactionlikeEvent edited +
RNADrug edited +
ChemicalDrug edited +
Complex edited +
Drug edited +
EntitySet edited +
Cell edited +
GenomeEncodedEntity edited +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
CellLineagePath edited +
Reaction edited +
OtherEntity edited +
Pathway edited +
FailedReaction edited +
PhysicalEntity edited +
Event edited +
SimpleEntity edited +
CandidateSet edited +
Reaction structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Pathway structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
CandidateSet authored 1
SimpleEntity authored 1
Event authored +
PhysicalEntity authored 1
Reaction authored +
CellLineagePath authored +
OtherEntity authored 1
FailedReaction authored +
Pathway authored +
Complex authored 1
EntitySet authored 1
Drug authored 1
ChemicalDrug authored 1
EntityWithAccessionedSequence authored 1
ProteinDrug authored 1
GenomeEncodedEntity authored 1
Cell authored 1
CellDevelopmentStep authored +
Polymerisation authored +
BlackBoxEvent authored +
Polymer authored 1
Depolymerisation authored +
RNADrug authored 1
InteractionEvent authored +
DefinedSet authored 1
ReactionlikeEvent authored +
_Deleted replacementInstances +
Event internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
CellLineagePath reviewed +
Reaction reviewed +
OtherEntity reviewed +
Pathway reviewed +
FailedReaction reviewed +
PhysicalEntity reviewed +
Event reviewed +
CandidateSet reviewed +
SimpleEntity reviewed +
Depolymerisation reviewed +
Polymer reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
Polymerisation reviewed +
DefinedSet reviewed +
InteractionEvent reviewed +
ReactionlikeEvent reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
Complex reviewed +
Drug reviewed +
EntitySet reviewed +
GenomeEncodedEntity reviewed +
Cell reviewed +
ProteinDrug reviewed +
EntityWithAccessionedSequence reviewed +
GO_BiologicalProcess modified +
CatalystActivityReference modified +
Publication modified +
SimpleEntity modified +
GO_CellularComponent modified +
RegulationReference modified +
SequenceOntology modified +
StableIdentifierReleaseStatus modified +
Summation modified +
ControlReference modified +
PositiveRegulation modified +
Regulation modified +
ReviewStatus modified +
CatalystActivity modified +
EntityWithAccessionedSequence modified +
ProteinDrug modified +
GeneticallyModifiedResidue modified +
RetractionStatus modified +
NegativeRegulation modified +
StableIdentifierHistory modified +
_Deleted modified +
PhysicalEntityCellType modified +
InteractionEvent modified +
ReactionlikeEvent modified +
Polymerisation modified +
Taxon modified +
BlackBoxEvent modified +
InterChainCrosslinkedResidue modified +
PathwayDiagram modified +
CandidateSet modified +
StableIdentifier modified +
PhysicalEntity modified +
Species modified +
DrugActionType modified +
OtherEntity modified +
CellLineagePath modified +
ModifiedResidue modified +
Disease modified +
ReferenceGeneProduct modified +
ReactionType modified +
Figure modified +
FunctionalStatusType modified +
Requirement modified +
_DeletedInstance modified +
TranscriptionalModification modified +
Person modified +
Affiliation modified +
PositiveGeneExpressionRegulation modified +
FragmentDeletionModification modified +
AbstractModifiedResidue modified +
ReferenceIsoform modified +
Event modified +
ControlledVocabulary modified +
GO_MolecularFunction modified +
EntityFunctionalStatus modified +
FailedReaction modified +
Pathway modified +
Reaction modified +
FunctionalStatus modified +
TranslationalModification modified +
ReferenceMolecule modified +
ReferenceTherapeutic modified +
EvidenceType modified +
GenomeEncodedEntity modified +
EntitySet modified +
GroupModifiedResidue modified +
FragmentReplacedModification modified +
RNADrug modified +
IntraChainCrosslinkedResidue modified +
NegativePrecedingEventReason modified +
Anatomy modified +
DefinedSet modified +
DatabaseIdentifier modified +
_UpdateTracker modified +
Polymer modified +
FrontPage modified +
Depolymerisation modified +
CrosslinkedResidue modified +
FragmentModification modified +
ReferenceGroup modified +
ReplacedResidue modified +
ModifiedNucleotide modified +
NegativePrecedingEvent modified +
InstanceEdit modified +
Compartment modified +
ReferenceEntity modified +
ReferenceDatabase modified +
NegativeGeneExpressionRegulation modified +
ReferenceDNASequence modified +
DeletedControlledVocabulary modified +
PsiMod modified +
URL modified +
ExternalOntology modified +
DatabaseObject modified +
Cell modified +
LiteratureReference modified +
Complex modified +
Drug modified +
ChemicalDrug modified +
ReferenceRNASequence modified +
Book modified +
ReferenceSequence modified +
_Release modified +
CellType modified +
NonsenseMutation modified +
CellDevelopmentStep modified +
MarkerReference modified +
FragmentInsertionModification modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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