Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
SimpleEntity revised +
PhysicalEntity revised +
Complex revised +
DefinedSet revised +
Polymerisation revised +
RNADrug revised +
OtherEntity revised +
ProteinDrug revised +
Polymer revised +
GenomeEncodedEntity revised +
Pathway revised +
BlackBoxEvent revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
ChemicalDrug revised +
Event revised +
Reaction revised +
InteractionEvent revised +
Depolymerisation revised +
FailedReaction revised +
EntityWithAccessionedSequence revised +
CellLineagePath revised +
Cell revised +
EntitySet revised +
Drug revised +
CandidateSet revised +
_Deleted replacementInstances +
URL modified +
NegativeGeneExpressionRegulation modified +
Publication modified +
ReferenceDNASequence modified +
_Deleted modified +
PhysicalEntity modified +
_DeletedInstance modified +
ModifiedResidue modified +
ModifiedNucleotide modified +
CandidateSet modified +
DatabaseIdentifier modified +
Taxon modified +
StableIdentifier modified +
Anatomy modified +
LiteratureReference modified +
RetractionStatus modified +
ControlledVocabulary modified +
Depolymerisation modified +
FragmentReplacedModification modified +
PhysicalEntityCellType modified +
Affiliation modified +
ReviewStatus modified +
Event modified +
Regulation modified +
PositiveRegulation modified +
EvidenceType modified +
BlackBoxEvent modified +
Pathway modified +
Polymer modified +
GenomeEncodedEntity modified +
Polymerisation modified +
ReferenceDatabase modified +
GeneticallyModifiedResidue modified +
Complex modified +
ExternalOntology modified +
TranscriptionalModification modified +
CellLineagePath modified +
Cell modified +
CellType modified +
DrugActionType modified +
DatabaseObject modified +
NegativePrecedingEventReason modified +
GO_BiologicalProcess modified +
RegulationReference modified +
ReferenceIsoform modified +
InteractionEvent modified +
PathwayDiagram modified +
CrosslinkedResidue modified +
ReplacedResidue modified +
TranslationalModification modified +
ReferenceGroup modified +
Requirement modified +
MarkerReference modified +
GO_CellularComponent modified +
ReactionlikeEvent modified +
AbstractModifiedResidue modified +
GO_MolecularFunction modified +
FragmentModification modified +
Figure modified +
DefinedSet modified +
IntraChainCrosslinkedResidue modified +
ReactionType modified +
PositiveGeneExpressionRegulation modified +
SimpleEntity modified +
ReferenceEntity modified +
Drug modified +
_Release modified +
DeletedControlledVocabulary modified +
CatalystActivity modified +
InterChainCrosslinkedResidue modified +
ControlReference modified +
FragmentDeletionModification modified +
EntityWithAccessionedSequence modified +
NegativeRegulation modified +
NegativePrecedingEvent modified +
ReferenceGeneProduct modified +
Compartment modified +
Book modified +
Reaction modified +
ReferenceRNASequence modified +
FrontPage modified +
Person modified +
Disease modified +
ChemicalDrug modified +
CellDevelopmentStep modified +
FunctionalStatusType modified +
OtherEntity modified +
ProteinDrug modified +
RNADrug modified +
CatalystActivityReference modified +
InstanceEdit modified +
SequenceOntology modified +
FunctionalStatus modified +
FragmentInsertionModification modified +
EntityFunctionalStatus modified +
ReferenceTherapeutic modified +
EntitySet modified +
ReferenceMolecule modified +
Summation modified +
NonsenseMutation modified +
StableIdentifierHistory modified +
GroupModifiedResidue modified +
PsiMod modified +
ReferenceSequence modified +
_UpdateTracker modified +
FailedReaction modified +
Species modified +
StableIdentifierReleaseStatus modified +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
MarkerReference created 1
GO_CellularComponent created 1
Requirement created 1
TranslationalModification created 1
ReferenceGroup created 1
ReplacedResidue created 1
GO_MolecularFunction created 1
AbstractModifiedResidue created 1
ReactionlikeEvent created 1
Figure created 1
FragmentModification created 1
IntraChainCrosslinkedResidue created 1
DefinedSet created 1
SimpleEntity created 1
PositiveGeneExpressionRegulation created 1
ReactionType created 1
Drug created 1
ReferenceEntity created 1
DeletedControlledVocabulary created 1
_Release created 1
InterChainCrosslinkedResidue created 1
CatalystActivity created 1
EntityWithAccessionedSequence created 1
FragmentDeletionModification created 1
ControlReference created 1
NegativeRegulation created 1
ReferenceGeneProduct created 1
Compartment created 1
NegativePrecedingEvent created 1
ReferenceRNASequence created 1
Reaction created 1
Book created 1
FrontPage created 1
Disease created 1
Person created 1
ChemicalDrug created 1
FunctionalStatusType created 1
CellDevelopmentStep created 1
CatalystActivityReference created 1
RNADrug created 1
OtherEntity created 1
ProteinDrug created 1
InstanceEdit created 1
SequenceOntology created 1
FragmentInsertionModification created 1
FunctionalStatus created 1
StableIdentifierHistory created 1
Summation created 1
NonsenseMutation created 1
ReferenceMolecule created 1
ReferenceTherapeutic created 1
EntityFunctionalStatus created 1
EntitySet created 1
_UpdateTracker created 1
GroupModifiedResidue created 1
PsiMod created 1
ReferenceSequence created 1
FailedReaction created 1
Species created 1
StableIdentifierReleaseStatus created 1
NegativeGeneExpressionRegulation created 1
URL created 1
Publication created 1
_Deleted created 1
ReferenceDNASequence created 1
PhysicalEntity created 1
_DeletedInstance created 1
CandidateSet created 1
ModifiedNucleotide created 1
ModifiedResidue created 1
DatabaseIdentifier created 1
Taxon created 1
StableIdentifier created 1
ControlledVocabulary created 1
RetractionStatus created 1
Anatomy created 1
LiteratureReference created 1
Depolymerisation created 1
FragmentReplacedModification created 1
Affiliation created 1
PhysicalEntityCellType created 1
Event created 1
ReviewStatus created 1
Regulation created 1
PositiveRegulation created 1
BlackBoxEvent created 1
EvidenceType created 1
Pathway created 1
Polymerisation created 1
ReferenceDatabase created 1
GenomeEncodedEntity created 1
Polymer created 1
GeneticallyModifiedResidue created 1
Complex created 1
ExternalOntology created 1
CellLineagePath created 1
Cell created 1
TranscriptionalModification created 1
DatabaseObject created 1
CellType created 1
DrugActionType created 1
NegativePrecedingEventReason created 1
ReferenceIsoform created 1
RegulationReference created 1
GO_BiologicalProcess created 1
CrosslinkedResidue created 1
InteractionEvent created 1
PathwayDiagram created 1
ReactionlikeEvent edited +
BlackBoxEvent edited +
CellDevelopmentStep edited +
Reaction edited +
Event edited +
ChemicalDrug edited +
Complex edited +
DefinedSet edited +
PhysicalEntity edited +
SimpleEntity edited +
Pathway edited +
OtherEntity edited +
ProteinDrug edited +
Polymer edited +
GenomeEncodedEntity edited +
Polymerisation edited +
RNADrug edited +
EntityWithAccessionedSequence edited +
CandidateSet edited +
Drug edited +
EntitySet edited +
Cell edited +
CellLineagePath edited +
Depolymerisation edited +
InteractionEvent edited +
FailedReaction edited +
Polymerisation structureModified +
FailedReaction structureModified +
Pathway structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
Reaction structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
EntitySet authored 1
CellLineagePath authored +
Cell authored 1
Drug authored 1
CandidateSet authored 1
EntityWithAccessionedSequence authored 1
FailedReaction authored +
InteractionEvent authored +
Depolymerisation authored +
ChemicalDrug authored 1
Reaction authored +
Event authored +
CellDevelopmentStep authored +
BlackBoxEvent authored +
ReactionlikeEvent authored +
ProteinDrug authored 1
OtherEntity authored 1
GenomeEncodedEntity authored 1
Polymer authored 1
RNADrug authored 1
Polymerisation authored +
Pathway authored +
SimpleEntity authored 1
Complex authored 1
DefinedSet authored 1
PhysicalEntity authored 1
SimpleEntity reviewed +
Complex reviewed +
DefinedSet reviewed +
PhysicalEntity reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
Polymer reviewed +
Polymerisation reviewed +
RNADrug reviewed +
Pathway reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
ReactionlikeEvent reviewed +
ChemicalDrug reviewed +
Reaction reviewed +
Event reviewed +
InteractionEvent reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
EntityWithAccessionedSequence reviewed +
EntitySet reviewed +
CellLineagePath reviewed +
Cell reviewed +
Drug reviewed +
CandidateSet reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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