Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Depolymerisation revised +
DefinedSet revised +
Pathway revised +
Polymerisation revised +
Reaction revised +
ProteinDrug revised +
GenomeEncodedEntity revised +
CellDevelopmentStep revised +
FailedReaction revised +
Polymer revised +
Complex revised +
ChemicalDrug revised +
CandidateSet revised +
InteractionEvent revised +
Drug revised +
EntitySet revised +
BlackBoxEvent revised +
RNADrug revised +
ReactionlikeEvent revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
PhysicalEntity revised +
CellLineagePath revised +
SimpleEntity revised +
Cell revised +
Event revised +
_Deleted replacementInstances +
Complex edited +
ChemicalDrug edited +
InteractionEvent edited +
Drug edited +
CandidateSet edited +
EntitySet edited +
OtherEntity edited +
ReactionlikeEvent edited +
BlackBoxEvent edited +
RNADrug edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
Event edited +
SimpleEntity edited +
CellLineagePath edited +
Cell edited +
DefinedSet edited +
Depolymerisation edited +
Reaction edited +
ProteinDrug edited +
Polymerisation edited +
Pathway edited +
GenomeEncodedEntity edited +
CellDevelopmentStep edited +
FailedReaction edited +
Polymer edited +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
FrontPage modified +
BlackBoxEvent modified +
InstanceEdit modified +
Event modified +
SimpleEntity modified +
CellLineagePath modified +
PhysicalEntity modified +
Drug modified +
StableIdentifierHistory modified +
CellDevelopmentStep modified +
EntityFunctionalStatus modified +
IntraChainCrosslinkedResidue modified +
CatalystActivity modified +
_Deleted modified +
ModifiedNucleotide modified +
FailedReaction modified +
FragmentInsertionModification modified +
Species modified +
DeletedControlledVocabulary modified +
DatabaseObject modified +
NonsenseMutation modified +
CrosslinkedResidue modified +
SequenceOntology modified +
PsiMod modified +
InterChainCrosslinkedResidue modified +
Cell modified +
ReferenceTherapeutic modified +
_Release modified +
NegativePrecedingEventReason modified +
Disease modified +
NegativeGeneExpressionRegulation modified +
InteractionEvent modified +
ReviewStatus modified +
Book modified +
FragmentModification modified +
GeneticallyModifiedResidue modified +
ChemicalDrug modified +
CellType modified +
PositiveGeneExpressionRegulation modified +
Summation modified +
ReferenceEntity modified +
_UpdateTracker modified +
Taxon modified +
GO_MolecularFunction modified +
GenomeEncodedEntity modified +
PositiveRegulation modified +
ControlledVocabulary modified +
ReplacedResidue modified +
ReactionlikeEvent modified +
OtherEntity modified +
AbstractModifiedResidue modified +
ReferenceIsoform modified +
Requirement modified +
ReferenceGeneProduct modified +
DatabaseIdentifier modified +
Anatomy modified +
EntityWithAccessionedSequence modified +
FragmentDeletionModification modified +
TranscriptionalModification modified +
GroupModifiedResidue modified +
FunctionalStatus modified +
MarkerReference modified +
Regulation modified +
CandidateSet modified +
CatalystActivityReference modified +
ReferenceGroup modified +
ReferenceDatabase modified +
FunctionalStatusType modified +
ReferenceRNASequence modified +
ExternalOntology modified +
ReferenceDNASequence modified +
Compartment modified +
Polymer modified +
NegativePrecedingEvent modified +
ReferenceMolecule modified +
RegulationReference modified +
EvidenceType modified +
_DeletedInstance modified +
Publication modified +
GO_CellularComponent modified +
ProteinDrug modified +
Polymerisation modified +
ReactionType modified +
StableIdentifierReleaseStatus modified +
Person modified +
RNADrug modified +
EntitySet modified +
Affiliation modified +
URL modified +
PathwayDiagram modified +
Complex modified +
TranslationalModification modified +
LiteratureReference modified +
Figure modified +
PhysicalEntityCellType modified +
DrugActionType modified +
StableIdentifier modified +
FragmentReplacedModification modified +
ModifiedResidue modified +
RetractionStatus modified +
GO_BiologicalProcess modified +
NegativeRegulation modified +
DefinedSet modified +
ControlReference modified +
Depolymerisation modified +
Reaction modified +
Pathway modified +
ReferenceSequence modified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
Event structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
Reaction structureModified +
Pathway structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
FailedReaction reviewed +
Polymer reviewed +
CellDevelopmentStep reviewed +
Reaction reviewed +
ProteinDrug reviewed +
Polymerisation reviewed +
Pathway reviewed +
GenomeEncodedEntity reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
PhysicalEntity reviewed +
EntityWithAccessionedSequence reviewed +
Event reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
Cell reviewed +
EntitySet reviewed +
OtherEntity reviewed +
ReactionlikeEvent reviewed +
RNADrug reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
Drug reviewed +
InteractionEvent reviewed +
CandidateSet reviewed +
Complex reviewed +
CellDevelopmentStep authored +
Polymer authored 1
FailedReaction authored +
Depolymerisation authored +
DefinedSet authored 1
GenomeEncodedEntity authored 1
Pathway authored +
Polymerisation authored +
ProteinDrug authored 1
Reaction authored +
BlackBoxEvent authored +
RNADrug authored 1
OtherEntity authored 1
ReactionlikeEvent authored +
EntitySet authored 1
CellLineagePath authored +
Cell authored 1
SimpleEntity authored 1
Event authored +
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
Complex authored 1
CandidateSet authored 1
InteractionEvent authored +
Drug authored 1
ChemicalDrug authored 1
ProteinDrug created 1
Polymerisation created 1
GO_CellularComponent created 1
EvidenceType created 1
_DeletedInstance created 1
Publication created 1
RegulationReference created 1
ReferenceMolecule created 1
NegativePrecedingEvent created 1
ReferenceDNASequence created 1
Compartment created 1
Polymer created 1
FunctionalStatusType created 1
ReferenceRNASequence created 1
ExternalOntology created 1
ReferenceDatabase created 1
ReferenceGroup created 1
Regulation created 1
CatalystActivityReference created 1
CandidateSet created 1
MarkerReference created 1
TranscriptionalModification created 1
GroupModifiedResidue created 1
FunctionalStatus created 1
DatabaseIdentifier created 1
Anatomy created 1
FragmentDeletionModification created 1
EntityWithAccessionedSequence created 1
Requirement created 1
ReferenceGeneProduct created 1
ReferenceIsoform created 1
OtherEntity created 1
AbstractModifiedResidue created 1
ReactionlikeEvent created 1
Reaction created 1
Pathway created 1
ReferenceSequence created 1
NegativeRegulation created 1
Depolymerisation created 1
ControlReference created 1
DefinedSet created 1
GO_BiologicalProcess created 1
RetractionStatus created 1
ModifiedResidue created 1
StableIdentifier created 1
FragmentReplacedModification created 1
DrugActionType created 1
PhysicalEntityCellType created 1
Figure created 1
Complex created 1
TranslationalModification created 1
LiteratureReference created 1
URL created 1
PathwayDiagram created 1
Affiliation created 1
EntitySet created 1
Person created 1
ReactionType created 1
StableIdentifierReleaseStatus created 1
RNADrug created 1
DatabaseObject created 1
NonsenseMutation created 1
DeletedControlledVocabulary created 1
Species created 1
FragmentInsertionModification created 1
FailedReaction created 1
_Deleted created 1
ModifiedNucleotide created 1
CatalystActivity created 1
EntityFunctionalStatus created 1
CellDevelopmentStep created 1
IntraChainCrosslinkedResidue created 1
StableIdentifierHistory created 1
Drug created 1
PhysicalEntity created 1
InstanceEdit created 1
Event created 1
SimpleEntity created 1
CellLineagePath created 1
FrontPage created 1
BlackBoxEvent created 1
ControlledVocabulary created 1
ReplacedResidue created 1
GO_MolecularFunction created 1
Taxon created 1
_UpdateTracker created 1
PositiveRegulation created 1
GenomeEncodedEntity created 1
ReferenceEntity created 1
PositiveGeneExpressionRegulation created 1
Summation created 1
FragmentModification created 1
Book created 1
CellType created 1
GeneticallyModifiedResidue created 1
ChemicalDrug created 1
ReviewStatus created 1
InteractionEvent created 1
Disease created 1
NegativeGeneExpressionRegulation created 1
NegativePrecedingEventReason created 1
_Release created 1
InterChainCrosslinkedResidue created 1
Cell created 1
ReferenceTherapeutic created 1
SequenceOntology created 1
PsiMod created 1
CrosslinkedResidue created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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