Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
StableIdentifier modified +
ReferenceIsoform modified +
PositiveRegulation modified +
FragmentModification modified +
Compartment modified +
RetractionStatus modified +
_UpdateTracker modified +
Polymerisation modified +
ReferenceDatabase modified +
ReviewStatus modified +
Drug modified +
FailedReaction modified +
ProteinDrug modified +
InstanceEdit modified +
Polymer modified +
ReferenceRNASequence modified +
URL modified +
Depolymerisation modified +
RNADrug modified +
PositiveGeneExpressionRegulation modified +
DrugActionType modified +
ControlledVocabulary modified +
DeletedControlledVocabulary modified +
EntityFunctionalStatus modified +
ChemicalDrug modified +
Summation modified +
ReactionlikeEvent modified +
ReferenceTherapeutic modified +
ReferenceGeneProduct modified +
CellLineagePath modified +
BlackBoxEvent modified +
GO_CellularComponent modified +
ModifiedResidue modified +
ReferenceEntity modified +
NegativeRegulation modified +
StableIdentifierReleaseStatus modified +
_DeletedInstance modified +
TranscriptionalModification modified +
StableIdentifierHistory modified +
FunctionalStatusType modified +
FragmentDeletionModification modified +
ExternalOntology modified +
FragmentReplacedModification modified +
MarkerReference modified +
Person modified +
Species modified +
SequenceOntology modified +
Disease modified +
ControlReference modified +
InterChainCrosslinkedResidue modified +
PhysicalEntity modified +
CatalystActivity modified +
CellDevelopmentStep modified +
DefinedSet modified +
EvidenceType modified +
EntityWithAccessionedSequence modified +
Affiliation modified +
PsiMod modified +
NegativeGeneExpressionRegulation modified +
Complex modified +
NegativePrecedingEventReason modified +
Pathway modified +
InteractionEvent modified +
_Release modified +
CandidateSet modified +
ModifiedNucleotide modified +
ReferenceGroup modified +
Requirement modified +
Taxon modified +
CellType modified +
IntraChainCrosslinkedResidue modified +
NonsenseMutation modified +
GO_BiologicalProcess modified +
Book modified +
PathwayDiagram modified +
PhysicalEntityCellType modified +
FrontPage modified +
FragmentInsertionModification modified +
SimpleEntity modified +
GO_MolecularFunction modified +
Regulation modified +
Cell modified +
LiteratureReference modified +
_Deleted modified +
NegativePrecedingEvent modified +
DatabaseObject modified +
GenomeEncodedEntity modified +
OtherEntity modified +
DatabaseIdentifier modified +
GroupModifiedResidue modified +
Figure modified +
ReplacedResidue modified +
CatalystActivityReference modified +
TranslationalModification modified +
AbstractModifiedResidue modified +
Anatomy modified +
FunctionalStatus modified +
ReferenceDNASequence modified +
Reaction modified +
ReactionType modified +
Publication modified +
GeneticallyModifiedResidue modified +
RegulationReference modified +
Event modified +
ReferenceSequence modified +
ReferenceMolecule modified +
CrosslinkedResidue modified +
EntitySet modified +
Depolymerisation structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
Pathway structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
GenomeEncodedEntity reviewed +
CandidateSet reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
CellLineagePath reviewed +
Pathway reviewed +
Drug reviewed +
OtherEntity reviewed +
Polymerisation reviewed +
RNADrug reviewed +
Depolymerisation reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
Reaction reviewed +
Polymer reviewed +
Event reviewed +
Cell reviewed +
ChemicalDrug reviewed +
EntitySet reviewed +
EntityWithAccessionedSequence reviewed +
CellDevelopmentStep reviewed +
PhysicalEntity reviewed +
DefinedSet reviewed +
SimpleEntity edited +
Depolymerisation edited +
RNADrug edited +
Polymer edited +
Reaction edited +
ProteinDrug edited +
FailedReaction edited +
EntityWithAccessionedSequence edited +
ChemicalDrug edited +
EntitySet edited +
Cell edited +
Event edited +
DefinedSet edited +
PhysicalEntity edited +
CellDevelopmentStep edited +
CandidateSet edited +
GenomeEncodedEntity edited +
InteractionEvent edited +
BlackBoxEvent edited +
Pathway edited +
CellLineagePath edited +
ReactionlikeEvent edited +
Complex edited +
Drug edited +
Polymerisation edited +
OtherEntity edited +
TranslationalModification created 1
AbstractModifiedResidue created 1
Anatomy created 1
FunctionalStatus created 1
GroupModifiedResidue created 1
ReplacedResidue created 1
CatalystActivityReference created 1
Figure created 1
DatabaseIdentifier created 1
OtherEntity created 1
DatabaseObject created 1
GenomeEncodedEntity created 1
_Deleted created 1
NegativePrecedingEvent created 1
ReferenceMolecule created 1
CrosslinkedResidue created 1
EntitySet created 1
Event created 1
ReferenceSequence created 1
RegulationReference created 1
GeneticallyModifiedResidue created 1
Publication created 1
ReactionType created 1
ReferenceDNASequence created 1
Reaction created 1
GO_BiologicalProcess created 1
Book created 1
Taxon created 1
IntraChainCrosslinkedResidue created 1
CellType created 1
NonsenseMutation created 1
ReferenceGroup created 1
ModifiedNucleotide created 1
Requirement created 1
_Release created 1
CandidateSet created 1
InteractionEvent created 1
Pathway created 1
Complex created 1
NegativePrecedingEventReason created 1
NegativeGeneExpressionRegulation created 1
LiteratureReference created 1
Regulation created 1
Cell created 1
GO_MolecularFunction created 1
SimpleEntity created 1
PhysicalEntityCellType created 1
FrontPage created 1
FragmentInsertionModification created 1
PathwayDiagram created 1
TranscriptionalModification created 1
FunctionalStatusType created 1
StableIdentifierHistory created 1
_DeletedInstance created 1
StableIdentifierReleaseStatus created 1
NegativeRegulation created 1
ModifiedResidue created 1
ReferenceEntity created 1
BlackBoxEvent created 1
GO_CellularComponent created 1
ReferenceTherapeutic created 1
CellLineagePath created 1
ReferenceGeneProduct created 1
Summation created 1
ReactionlikeEvent created 1
EvidenceType created 1
EntityWithAccessionedSequence created 1
PsiMod created 1
Affiliation created 1
DefinedSet created 1
InterChainCrosslinkedResidue created 1
PhysicalEntity created 1
CatalystActivity created 1
CellDevelopmentStep created 1
Species created 1
SequenceOntology created 1
Disease created 1
ControlReference created 1
MarkerReference created 1
Person created 1
ExternalOntology created 1
FragmentReplacedModification created 1
FragmentDeletionModification created 1
Drug created 1
RetractionStatus created 1
ReferenceDatabase created 1
Polymerisation created 1
ReviewStatus created 1
_UpdateTracker created 1
FragmentModification created 1
Compartment created 1
PositiveRegulation created 1
ReferenceIsoform created 1
StableIdentifier created 1
EntityFunctionalStatus created 1
ChemicalDrug created 1
DeletedControlledVocabulary created 1
ControlledVocabulary created 1
URL created 1
RNADrug created 1
Depolymerisation created 1
DrugActionType created 1
PositiveGeneExpressionRegulation created 1
ReferenceRNASequence created 1
FailedReaction created 1
ProteinDrug created 1
Polymer created 1
InstanceEdit created 1
SimpleEntity revised +
RNADrug revised +
Depolymerisation revised +
Reaction revised +
Polymer revised +
ProteinDrug revised +
FailedReaction revised +
Cell revised +
Event revised +
EntitySet revised +
ChemicalDrug revised +
EntityWithAccessionedSequence revised +
PhysicalEntity revised +
CellDevelopmentStep revised +
DefinedSet revised +
BlackBoxEvent revised +
InteractionEvent revised +
CandidateSet revised +
GenomeEncodedEntity revised +
ReactionlikeEvent revised +
Complex revised +
CellLineagePath revised +
Pathway revised +
Drug revised +
OtherEntity revised +
Polymerisation revised +
_Deleted replacementInstances +
Event authored +
Cell authored 1
EntitySet authored 1
ChemicalDrug authored 1
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
CellDevelopmentStep authored +
DefinedSet authored 1
Depolymerisation authored +
RNADrug authored 1
SimpleEntity authored 1
FailedReaction authored +
ProteinDrug authored 1
Reaction authored +
Polymer authored 1
Drug authored 1
OtherEntity authored 1
Polymerisation authored +
BlackBoxEvent authored +
InteractionEvent authored +
GenomeEncodedEntity authored 1
CandidateSet authored 1
Complex authored 1
ReactionlikeEvent authored +
CellLineagePath authored +
Pathway authored +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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