Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymer authored 1
CandidateSet authored 1
ChemicalDrug authored 1
PhysicalEntity authored 1
Reaction authored +
Pathway authored +
CellLineagePath authored +
CellDevelopmentStep authored +
Drug authored 1
Cell authored 1
ProteinDrug authored 1
InteractionEvent authored +
EntityWithAccessionedSequence authored 1
ReactionlikeEvent authored +
GenomeEncodedEntity authored 1
Event authored +
Depolymerisation authored +
DefinedSet authored 1
OtherEntity authored 1
SimpleEntity authored 1
RNADrug authored 1
BlackBoxEvent authored +
Polymerisation authored +
FailedReaction authored +
EntitySet authored 1
Complex authored 1
ReferenceTherapeutic created 1
Drug created 1
ModifiedNucleotide created 1
URL created 1
GeneticallyModifiedResidue created 1
CellType created 1
SimpleEntity created 1
DefinedSet created 1
OtherEntity created 1
Complex created 1
_Deleted created 1
_DeletedInstance created 1
BlackBoxEvent created 1
PathwayDiagram created 1
FragmentInsertionModification created 1
FragmentDeletionModification created 1
Polymer created 1
CatalystActivityReference created 1
_Release created 1
FragmentModification created 1
CrosslinkedResidue created 1
ReferenceGeneProduct created 1
ModifiedResidue created 1
Person created 1
CellDevelopmentStep created 1
InstanceEdit created 1
GO_MolecularFunction created 1
ControlledVocabulary created 1
DatabaseObject created 1
ProteinDrug created 1
TranscriptionalModification created 1
TranslationalModification created 1
FragmentReplacedModification created 1
Affiliation created 1
Event created 1
FrontPage created 1
Taxon created 1
Disease created 1
DatabaseIdentifier created 1
ExternalOntology created 1
EntitySet created 1
RegulationReference created 1
InterChainCrosslinkedResidue created 1
GroupModifiedResidue created 1
EvidenceType created 1
PositiveGeneExpressionRegulation created 1
ReferenceIsoform created 1
ReferenceDatabase created 1
Regulation created 1
PhysicalEntity created 1
Pathway created 1
Anatomy created 1
DrugActionType created 1
StableIdentifierHistory created 1
PhysicalEntityCellType created 1
FunctionalStatus created 1
EntityWithAccessionedSequence created 1
Compartment created 1
ReferenceRNASequence created 1
StableIdentifier created 1
NegativePrecedingEvent created 1
GenomeEncodedEntity created 1
Depolymerisation created 1
StableIdentifierReleaseStatus created 1
Requirement created 1
GO_BiologicalProcess created 1
AbstractModifiedResidue created 1
ReactionType created 1
RNADrug created 1
Species created 1
Polymerisation created 1
FailedReaction created 1
CatalystActivity created 1
RetractionStatus created 1
ReferenceMolecule created 1
NonsenseMutation created 1
NegativePrecedingEventReason created 1
FunctionalStatusType created 1
GO_CellularComponent created 1
PositiveRegulation created 1
LiteratureReference created 1
IntraChainCrosslinkedResidue created 1
DeletedControlledVocabulary created 1
Book created 1
Figure created 1
SequenceOntology created 1
InteractionEvent created 1
Cell created 1
Summation created 1
ReferenceDNASequence created 1
ReferenceSequence created 1
ReactionlikeEvent created 1
NegativeRegulation created 1
NegativeGeneExpressionRegulation created 1
MarkerReference created 1
Publication created 1
ReviewStatus created 1
CandidateSet created 1
EntityFunctionalStatus created 1
PsiMod created 1
ChemicalDrug created 1
ReferenceGroup created 1
ControlReference created 1
CellLineagePath created 1
_UpdateTracker created 1
Reaction created 1
ReferenceEntity created 1
ReplacedResidue created 1
EntitySet revised +
Complex revised +
BlackBoxEvent revised +
FailedReaction revised +
Polymerisation revised +
RNADrug revised +
SimpleEntity revised +
OtherEntity revised +
DefinedSet revised +
GenomeEncodedEntity revised +
Event revised +
Depolymerisation revised +
ReactionlikeEvent revised +
EntityWithAccessionedSequence revised +
Drug revised +
Cell revised +
ProteinDrug revised +
InteractionEvent revised +
CellDevelopmentStep revised +
CellLineagePath revised +
Reaction revised +
PhysicalEntity revised +
Pathway revised +
ChemicalDrug revised +
CandidateSet revised +
Polymer revised +
InteractionEvent internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
Polymer reviewed +
CellDevelopmentStep reviewed +
CellLineagePath reviewed +
Reaction reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
Depolymerisation reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
EntityWithAccessionedSequence reviewed +
InteractionEvent reviewed +
Drug reviewed +
ProteinDrug reviewed +
Cell reviewed +
EntitySet reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
Polymerisation reviewed +
FailedReaction reviewed +
RNADrug reviewed +
SimpleEntity reviewed +
OtherEntity reviewed +
DefinedSet reviewed +
ReferenceIsoform modified +
PositiveGeneExpressionRegulation modified +
EvidenceType modified +
ReferenceDatabase modified +
GroupModifiedResidue modified +
Anatomy modified +
StableIdentifierHistory modified +
DrugActionType modified +
Pathway modified +
Regulation modified +
PhysicalEntity modified +
FragmentReplacedModification modified +
TranslationalModification modified +
Event modified +
Affiliation modified +
GO_MolecularFunction modified +
ControlledVocabulary modified +
DatabaseObject modified +
TranscriptionalModification modified +
ProteinDrug modified +
EntitySet modified +
ExternalOntology modified +
RegulationReference modified +
InterChainCrosslinkedResidue modified +
Taxon modified +
FrontPage modified +
DatabaseIdentifier modified +
Disease modified +
FragmentModification modified +
_Release modified +
ReferenceGeneProduct modified +
CrosslinkedResidue modified +
PathwayDiagram modified +
CatalystActivityReference modified +
Polymer modified +
FragmentInsertionModification modified +
FragmentDeletionModification modified +
CellDevelopmentStep modified +
InstanceEdit modified +
ModifiedResidue modified +
Person modified +
CellType modified +
URL modified +
GeneticallyModifiedResidue modified +
ReferenceTherapeutic modified +
ModifiedNucleotide modified +
Drug modified +
_Deleted modified +
Complex modified +
BlackBoxEvent modified +
_DeletedInstance modified +
SimpleEntity modified +
OtherEntity modified +
DefinedSet modified +
ChemicalDrug modified +
ReferenceGroup modified +
CandidateSet modified +
PsiMod modified +
EntityFunctionalStatus modified +
ReplacedResidue modified +
ReferenceEntity modified +
CellLineagePath modified +
ControlReference modified +
Reaction modified +
_UpdateTracker modified +
ReferenceSequence modified +
ReferenceDNASequence modified +
Summation modified +
NegativeRegulation modified +
ReactionlikeEvent modified +
SequenceOntology modified +
Cell modified +
InteractionEvent modified +
Publication modified +
ReviewStatus modified +
NegativeGeneExpressionRegulation modified +
MarkerReference modified +
NonsenseMutation modified +
NegativePrecedingEventReason modified +
PositiveRegulation modified +
GO_CellularComponent modified +
FunctionalStatusType modified +
CatalystActivity modified +
ReferenceMolecule modified +
RetractionStatus modified +
Figure modified +
LiteratureReference modified +
Book modified +
DeletedControlledVocabulary modified +
IntraChainCrosslinkedResidue modified +
StableIdentifier modified +
GenomeEncodedEntity modified +
Depolymerisation modified +
NegativePrecedingEvent modified +
Compartment modified +
PhysicalEntityCellType modified +
EntityWithAccessionedSequence modified +
FunctionalStatus modified +
ReferenceRNASequence modified +
FailedReaction modified +
Species modified +
Polymerisation modified +
ReactionType modified +
RNADrug modified +
StableIdentifierReleaseStatus modified +
AbstractModifiedResidue modified +
GO_BiologicalProcess modified +
Requirement modified +
_Deleted replacementInstances +
CandidateSet edited +
Polymer edited +
ChemicalDrug edited +
CellLineagePath edited +
Reaction edited +
PhysicalEntity edited +
Pathway edited +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
ProteinDrug edited +
Drug edited +
InteractionEvent edited +
Cell edited +
ReactionlikeEvent edited +
Depolymerisation edited +
Event edited +
GenomeEncodedEntity edited +
SimpleEntity edited +
DefinedSet edited +
OtherEntity edited +
Complex edited +
EntitySet edited +
RNADrug edited +
FailedReaction edited +
BlackBoxEvent edited +
Polymerisation edited +
Pathway structureModified +
Reaction structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
Depolymerisation structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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