Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Requirement created 1
TranscriptionalModification created 1
FragmentModification created 1
GO_MolecularFunction created 1
ReactionlikeEvent created 1
Regulation created 1
ReviewStatus created 1
ReferenceIsoform created 1
_UpdateTracker created 1
SequenceOntology created 1
CatalystActivity created 1
PositiveGeneExpressionRegulation created 1
StableIdentifierReleaseStatus created 1
IntraChainCrosslinkedResidue created 1
AbstractModifiedResidue created 1
CrosslinkedResidue created 1
ExternalOntology created 1
EntityFunctionalStatus created 1
_Deleted created 1
Reaction created 1
DeletedControlledVocabulary created 1
ReferenceDNASequence created 1
TranslationalModification created 1
ProteinDrug created 1
GenomeEncodedEntity created 1
_Release created 1
Person created 1
GeneticallyModifiedResidue created 1
Polymerisation created 1
MarkerReference created 1
RegulationReference created 1
Summation created 1
StableIdentifierHistory created 1
CellDevelopmentStep created 1
ReferenceTherapeutic created 1
FunctionalStatus created 1
PhysicalEntity created 1
ReferenceGroup created 1
RNADrug created 1
CatalystActivityReference created 1
ModifiedNucleotide created 1
EntityWithAccessionedSequence created 1
LiteratureReference created 1
GO_BiologicalProcess created 1
FailedReaction created 1
FragmentReplacedModification created 1
ControlledVocabulary created 1
Book created 1
GroupModifiedResidue created 1
ReferenceMolecule created 1
PathwayDiagram created 1
ReferenceDatabase created 1
SimpleEntity created 1
Taxon created 1
ReactionType created 1
Depolymerisation created 1
BlackBoxEvent created 1
Drug created 1
ReferenceEntity created 1
ControlReference created 1
CellLineagePath created 1
RetractionStatus created 1
Publication created 1
Cell created 1
FunctionalStatusType created 1
PositiveRegulation created 1
NegativeGeneExpressionRegulation created 1
FragmentInsertionModification created 1
NegativePrecedingEventReason created 1
EntitySet created 1
DatabaseIdentifier created 1
FragmentDeletionModification created 1
NegativePrecedingEvent created 1
Polymer created 1
FrontPage created 1
ReferenceSequence created 1
ReferenceGeneProduct created 1
Disease created 1
Pathway created 1
Species created 1
PhysicalEntityCellType created 1
Compartment created 1
InstanceEdit created 1
Event created 1
InteractionEvent created 1
DrugActionType created 1
NegativeRegulation created 1
GO_CellularComponent created 1
DatabaseObject created 1
_DeletedInstance created 1
URL created 1
ReferenceRNASequence created 1
ReplacedResidue created 1
PsiMod created 1
Affiliation created 1
DefinedSet created 1
CandidateSet created 1
Anatomy created 1
StableIdentifier created 1
NonsenseMutation created 1
InterChainCrosslinkedResidue created 1
EvidenceType created 1
CellType created 1
ModifiedResidue created 1
OtherEntity created 1
Complex created 1
Figure created 1
ChemicalDrug created 1
GO_CellularComponent modified +
DatabaseObject modified +
NegativeRegulation modified +
DrugActionType modified +
Event modified +
InteractionEvent modified +
Compartment modified +
InstanceEdit modified +
Pathway modified +
Species modified +
PhysicalEntityCellType modified +
Disease modified +
ReferenceSequence modified +
ReferenceGeneProduct modified +
Polymer modified +
FrontPage modified +
DatabaseIdentifier modified +
NegativePrecedingEvent modified +
FragmentDeletionModification modified +
NegativePrecedingEventReason modified +
EntitySet modified +
NegativeGeneExpressionRegulation modified +
FragmentInsertionModification modified +
PositiveRegulation modified +
ChemicalDrug modified +
Complex modified +
Figure modified +
OtherEntity modified +
ModifiedResidue modified +
EvidenceType modified +
CellType modified +
InterChainCrosslinkedResidue modified +
StableIdentifier modified +
NonsenseMutation modified +
Anatomy modified +
DefinedSet modified +
Affiliation modified +
CandidateSet modified +
PsiMod modified +
ReplacedResidue modified +
ReferenceRNASequence modified +
URL modified +
_DeletedInstance modified +
_Release modified +
GeneticallyModifiedResidue modified +
Person modified +
Polymerisation modified +
GenomeEncodedEntity modified +
ReferenceDNASequence modified +
ProteinDrug modified +
TranslationalModification modified +
DeletedControlledVocabulary modified +
Reaction modified +
ExternalOntology modified +
_Deleted modified +
EntityFunctionalStatus modified +
AbstractModifiedResidue modified +
CrosslinkedResidue modified +
IntraChainCrosslinkedResidue modified +
StableIdentifierReleaseStatus modified +
_UpdateTracker modified +
CatalystActivity modified +
SequenceOntology modified +
PositiveGeneExpressionRegulation modified +
Regulation modified +
ReviewStatus modified +
ReferenceIsoform modified +
ReactionlikeEvent modified +
GO_MolecularFunction modified +
TranscriptionalModification modified +
Requirement modified +
FragmentModification modified +
FunctionalStatusType modified +
RetractionStatus modified +
Publication modified +
Cell modified +
ControlReference modified +
CellLineagePath modified +
ReferenceEntity modified +
Drug modified +
ReactionType modified +
Depolymerisation modified +
BlackBoxEvent modified +
SimpleEntity modified +
ReferenceDatabase modified +
Taxon modified +
PathwayDiagram modified +
ControlledVocabulary modified +
Book modified +
GroupModifiedResidue modified +
ReferenceMolecule modified +
LiteratureReference modified +
FailedReaction modified +
GO_BiologicalProcess modified +
FragmentReplacedModification modified +
ModifiedNucleotide modified +
EntityWithAccessionedSequence modified +
PhysicalEntity modified +
RNADrug modified +
ReferenceGroup modified +
CatalystActivityReference modified +
ReferenceTherapeutic modified +
FunctionalStatus modified +
CellDevelopmentStep modified +
RegulationReference modified +
Summation modified +
StableIdentifierHistory modified +
MarkerReference modified +
RNADrug edited +
PhysicalEntity edited +
Polymer edited +
FailedReaction edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
DefinedSet edited +
CellDevelopmentStep edited +
ReactionlikeEvent edited +
EntitySet edited +
ProteinDrug edited +
CellLineagePath edited +
Complex edited +
OtherEntity edited +
Drug edited +
Polymerisation edited +
GenomeEncodedEntity edited +
Cell edited +
ChemicalDrug edited +
Pathway edited +
Depolymerisation edited +
BlackBoxEvent edited +
InteractionEvent edited +
Reaction edited +
Event edited +
SimpleEntity edited +
CellLineagePath reviewed +
Complex reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
Drug reviewed +
Polymerisation reviewed +
Cell reviewed +
GenomeEncodedEntity reviewed +
ChemicalDrug reviewed +
Pathway reviewed +
BlackBoxEvent reviewed +
Depolymerisation reviewed +
Reaction reviewed +
InteractionEvent reviewed +
Event reviewed +
SimpleEntity reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
FailedReaction reviewed +
EntityWithAccessionedSequence reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
CellDevelopmentStep reviewed +
ReactionlikeEvent reviewed +
EntitySet reviewed +
Drug authored 1
OtherEntity authored 1
CellLineagePath authored +
Complex authored 1
ProteinDrug authored 1
Cell authored 1
ChemicalDrug authored 1
GenomeEncodedEntity authored 1
Polymerisation authored +
Pathway authored +
SimpleEntity authored 1
BlackBoxEvent authored +
Depolymerisation authored +
Reaction authored +
InteractionEvent authored +
Event authored +
Polymer authored 1
RNADrug authored 1
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
DefinedSet authored 1
FailedReaction authored +
ReactionlikeEvent authored +
EntitySet authored 1
CellDevelopmentStep authored +
Pathway structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
OtherEntity revised +
Drug revised +
Complex revised +
CellLineagePath revised +
ProteinDrug revised +
Cell revised +
GenomeEncodedEntity revised +
ChemicalDrug revised +
Polymerisation revised +
Pathway revised +
SimpleEntity revised +
Event revised +
Depolymerisation revised +
BlackBoxEvent revised +
Reaction revised +
InteractionEvent revised +
Polymer revised +
RNADrug revised +
PhysicalEntity revised +
DefinedSet revised +
CandidateSet revised +
EntityWithAccessionedSequence revised +
FailedReaction revised +
ReactionlikeEvent revised +
EntitySet revised +
CellDevelopmentStep revised +
_Deleted replacementInstances +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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