Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
DatabaseIdentifier modified +
Polymer modified +
GO_BiologicalProcess modified +
URL modified +
ReferenceEntity modified +
MarkerReference modified +
Disease modified +
RNADrug modified +
StableIdentifier modified +
ExternalOntology modified +
PhysicalEntity modified +
NegativeGeneExpressionRegulation modified +
ControlReference modified +
Figure modified +
Anatomy modified +
CellDevelopmentStep modified +
InstanceEdit modified +
PositiveRegulation modified +
SequenceOntology modified +
Reaction modified +
CatalystActivityReference modified +
ReferenceMolecule modified +
Pathway modified +
ReferenceGroup modified +
InterChainCrosslinkedResidue modified +
CatalystActivity modified +
FragmentReplacedModification modified +
_Deleted modified +
RetractionStatus modified +
FunctionalStatusType modified +
NegativeRegulation modified +
ReferenceTherapeutic modified +
EntitySet modified +
Depolymerisation modified +
FrontPage modified +
PsiMod modified +
BlackBoxEvent modified +
ReviewStatus modified +
SimpleEntity modified +
Summation modified +
Publication modified +
TranscriptionalModification modified +
InteractionEvent modified +
StableIdentifierHistory modified +
EvidenceType modified +
CellLineagePath modified +
Polymerisation modified +
FragmentModification modified +
PathwayDiagram modified +
CellType modified +
ReferenceRNASequence modified +
TranslationalModification modified +
Cell modified +
GenomeEncodedEntity modified +
_UpdateTracker modified +
OtherEntity modified +
Requirement modified +
ReactionlikeEvent modified +
Taxon modified +
FunctionalStatus modified +
_DeletedInstance modified +
DrugActionType modified +
NegativePrecedingEventReason modified +
EntityWithAccessionedSequence modified +
IntraChainCrosslinkedResidue modified +
Event modified +
FailedReaction modified +
ProteinDrug modified +
Complex modified +
NegativePrecedingEvent modified +
Person modified +
FragmentInsertionModification modified +
Compartment modified +
ModifiedResidue modified +
ReferenceDatabase modified +
PhysicalEntityCellType modified +
DatabaseObject modified +
ReactionType modified +
ReferenceSequence modified +
GeneticallyModifiedResidue modified +
DeletedControlledVocabulary modified +
LiteratureReference modified +
Affiliation modified +
ReferenceGeneProduct modified +
CandidateSet modified +
Regulation modified +
ModifiedNucleotide modified +
FragmentDeletionModification modified +
ReferenceIsoform modified +
GroupModifiedResidue modified +
Species modified +
_Release modified +
CrosslinkedResidue modified +
StableIdentifierReleaseStatus modified +
Drug modified +
AbstractModifiedResidue modified +
ChemicalDrug modified +
ReferenceDNASequence modified +
PositiveGeneExpressionRegulation modified +
NonsenseMutation modified +
ReplacedResidue modified +
EntityFunctionalStatus modified +
GO_CellularComponent modified +
Book modified +
GO_MolecularFunction modified +
DefinedSet modified +
ControlledVocabulary modified +
RegulationReference modified +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
Species created 1
ReferenceIsoform created 1
GroupModifiedResidue created 1
FragmentDeletionModification created 1
ModifiedNucleotide created 1
Regulation created 1
CrosslinkedResidue created 1
StableIdentifierReleaseStatus created 1
_Release created 1
ReferenceGeneProduct created 1
LiteratureReference created 1
Affiliation created 1
CandidateSet created 1
Book created 1
RegulationReference created 1
ControlledVocabulary created 1
DefinedSet created 1
GO_MolecularFunction created 1
NonsenseMutation created 1
PositiveGeneExpressionRegulation created 1
ReferenceDNASequence created 1
AbstractModifiedResidue created 1
Drug created 1
ChemicalDrug created 1
EntityFunctionalStatus created 1
GO_CellularComponent created 1
ReplacedResidue created 1
EntityWithAccessionedSequence created 1
_DeletedInstance created 1
DrugActionType created 1
NegativePrecedingEventReason created 1
NegativePrecedingEvent created 1
FailedReaction created 1
ProteinDrug created 1
Event created 1
Complex created 1
IntraChainCrosslinkedResidue created 1
ReferenceRNASequence created 1
CellType created 1
FragmentModification created 1
PathwayDiagram created 1
OtherEntity created 1
ReactionlikeEvent created 1
Requirement created 1
Taxon created 1
FunctionalStatus created 1
GenomeEncodedEntity created 1
_UpdateTracker created 1
Cell created 1
TranslationalModification created 1
ReactionType created 1
ReferenceSequence created 1
GeneticallyModifiedResidue created 1
PhysicalEntityCellType created 1
DatabaseObject created 1
DeletedControlledVocabulary created 1
Compartment created 1
FragmentInsertionModification created 1
Person created 1
ReferenceDatabase created 1
ModifiedResidue created 1
ReferenceTherapeutic created 1
NegativeRegulation created 1
FunctionalStatusType created 1
Depolymerisation created 1
EntitySet created 1
_Deleted created 1
FragmentReplacedModification created 1
CatalystActivity created 1
RetractionStatus created 1
EvidenceType created 1
StableIdentifierHistory created 1
Polymerisation created 1
CellLineagePath created 1
Summation created 1
SimpleEntity created 1
ReviewStatus created 1
PsiMod created 1
FrontPage created 1
BlackBoxEvent created 1
InteractionEvent created 1
TranscriptionalModification created 1
Publication created 1
ControlReference created 1
NegativeGeneExpressionRegulation created 1
PhysicalEntity created 1
RNADrug created 1
StableIdentifier created 1
ExternalOntology created 1
Anatomy created 1
Figure created 1
GO_BiologicalProcess created 1
Polymer created 1
DatabaseIdentifier created 1
Disease created 1
MarkerReference created 1
ReferenceEntity created 1
URL created 1
Reaction created 1
InterChainCrosslinkedResidue created 1
ReferenceGroup created 1
ReferenceMolecule created 1
Pathway created 1
CatalystActivityReference created 1
InstanceEdit created 1
CellDevelopmentStep created 1
SequenceOntology created 1
PositiveRegulation created 1
FailedReaction edited +
Complex edited +
ProteinDrug edited +
Event edited +
EntitySet edited +
Depolymerisation edited +
RNADrug edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
CandidateSet edited +
Cell edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
OtherEntity edited +
Polymer edited +
CellLineagePath edited +
DefinedSet edited +
Pathway edited +
Polymerisation edited +
Reaction edited +
InteractionEvent edited +
Drug edited +
ChemicalDrug edited +
CellDevelopmentStep edited +
BlackBoxEvent edited +
SimpleEntity edited +
Event structureModified +
FailedReaction structureModified +
Pathway structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
OtherEntity reviewed +
CandidateSet reviewed +
Cell reviewed +
Polymer reviewed +
Depolymerisation reviewed +
Complex reviewed +
EntitySet reviewed +
FailedReaction reviewed +
ProteinDrug reviewed +
Event reviewed +
RNADrug reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
SimpleEntity reviewed +
Drug reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
Polymerisation reviewed +
CellLineagePath reviewed +
DefinedSet reviewed +
Pathway reviewed +
Reaction reviewed +
Reaction authored +
Polymerisation authored +
DefinedSet authored 1
CellLineagePath authored +
Pathway authored +
SimpleEntity authored 1
CellDevelopmentStep authored +
ChemicalDrug authored 1
Drug authored 1
BlackBoxEvent authored +
InteractionEvent authored +
RNADrug authored 1
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
Depolymerisation authored +
ProteinDrug authored 1
Complex authored 1
FailedReaction authored +
Event authored +
EntitySet authored 1
Polymer authored 1
GenomeEncodedEntity authored 1
OtherEntity authored 1
ReactionlikeEvent authored +
CandidateSet authored 1
Cell authored 1
Depolymerisation revised +
Complex revised +
FailedReaction revised +
ProteinDrug revised +
Event revised +
EntitySet revised +
RNADrug revised +
EntityWithAccessionedSequence revised +
PhysicalEntity revised +
GenomeEncodedEntity revised +
ReactionlikeEvent revised +
OtherEntity revised +
CandidateSet revised +
Cell revised +
Polymer revised +
Polymerisation revised +
DefinedSet revised +
CellLineagePath revised +
Pathway revised +
Reaction revised +
InteractionEvent revised +
SimpleEntity revised +
ChemicalDrug revised +
BlackBoxEvent revised +
Drug revised +
CellDevelopmentStep revised +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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