Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
OtherEntity edited +
PhysicalEntity edited +
CandidateSet edited +
Polymerisation edited +
RNADrug edited +
InteractionEvent edited +
EntitySet edited +
Reaction edited +
EntityWithAccessionedSequence edited +
CellDevelopmentStep edited +
ProteinDrug edited +
Complex edited +
Polymer edited +
ReactionlikeEvent edited +
GenomeEncodedEntity edited +
SimpleEntity edited +
ChemicalDrug edited +
BlackBoxEvent edited +
Event edited +
Drug edited +
CellLineagePath edited +
Pathway edited +
FailedReaction edited +
Cell edited +
DefinedSet edited +
Depolymerisation edited +
FailedReaction revised +
Pathway revised +
Depolymerisation revised +
Cell revised +
DefinedSet revised +
Event revised +
BlackBoxEvent revised +
ChemicalDrug revised +
CellLineagePath revised +
Drug revised +
SimpleEntity revised +
GenomeEncodedEntity revised +
ReactionlikeEvent revised +
Reaction revised +
EntityWithAccessionedSequence revised +
Polymer revised +
Complex revised +
CellDevelopmentStep revised +
ProteinDrug revised +
InteractionEvent revised +
EntitySet revised +
RNADrug revised +
Polymerisation revised +
CandidateSet revised +
OtherEntity revised +
PhysicalEntity revised +
_Deleted replacementInstances +
PsiMod created 1
Person created 1
OtherEntity created 1
FragmentReplacedModification created 1
ModifiedNucleotide created 1
ReviewStatus created 1
StableIdentifier created 1
Figure created 1
NegativePrecedingEvent created 1
IntraChainCrosslinkedResidue created 1
Summation created 1
ReferenceDatabase created 1
TranslationalModification created 1
Polymerisation created 1
ProteinDrug created 1
ReferenceGeneProduct created 1
Anatomy created 1
InstanceEdit created 1
URL created 1
NegativeRegulation created 1
InterChainCrosslinkedResidue created 1
MarkerReference created 1
SimpleEntity created 1
EvidenceType created 1
NegativePrecedingEventReason created 1
PositiveGeneExpressionRegulation created 1
DrugActionType created 1
CellLineagePath created 1
LiteratureReference created 1
ReferenceDNASequence created 1
Regulation created 1
Disease created 1
ReferenceEntity created 1
Publication created 1
CrosslinkedResidue created 1
NegativeGeneExpressionRegulation created 1
FragmentModification created 1
GO_MolecularFunction created 1
EntityFunctionalStatus created 1
ControlledVocabulary created 1
ReactionType created 1
Reaction created 1
ReferenceRNASequence created 1
GroupModifiedResidue created 1
ReferenceMolecule created 1
StableIdentifierReleaseStatus created 1
_DeletedInstance created 1
_UpdateTracker created 1
AbstractModifiedResidue created 1
SequenceOntology created 1
ChemicalDrug created 1
DeletedControlledVocabulary created 1
TranscriptionalModification created 1
Cell created 1
ReferenceIsoform created 1
Pathway created 1
FailedReaction created 1
PhysicalEntity created 1
RetractionStatus created 1
CatalystActivity created 1
FunctionalStatus created 1
CandidateSet created 1
CellType created 1
ReplacedResidue created 1
EntitySet created 1
InteractionEvent created 1
Affiliation created 1
RNADrug created 1
Polymer created 1
RegulationReference created 1
ReferenceTherapeutic created 1
GO_CellularComponent created 1
_Deleted created 1
ReactionlikeEvent created 1
Book created 1
DatabaseIdentifier created 1
Event created 1
BlackBoxEvent created 1
FunctionalStatusType created 1
Depolymerisation created 1
DefinedSet created 1
Species created 1
ExternalOntology created 1
DatabaseObject created 1
_Release created 1
ModifiedResidue created 1
ReferenceGroup created 1
FragmentInsertionModification created 1
ReferenceSequence created 1
FragmentDeletionModification created 1
PhysicalEntityCellType created 1
Requirement created 1
PositiveRegulation created 1
PathwayDiagram created 1
Complex created 1
FrontPage created 1
StableIdentifierHistory created 1
CellDevelopmentStep created 1
NonsenseMutation created 1
EntityWithAccessionedSequence created 1
ControlReference created 1
GenomeEncodedEntity created 1
Drug created 1
GO_BiologicalProcess created 1
GeneticallyModifiedResidue created 1
Taxon created 1
CatalystActivityReference created 1
Compartment created 1
CandidateSet reviewed +
PhysicalEntity reviewed +
OtherEntity reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
Polymer reviewed +
Complex reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
RNADrug reviewed +
Polymerisation reviewed +
InteractionEvent reviewed +
EntitySet reviewed +
SimpleEntity reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
Cell reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
Pathway reviewed +
CellLineagePath reviewed +
Drug reviewed +
BlackBoxEvent reviewed +
ChemicalDrug reviewed +
Event reviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
ReactionlikeEvent internalReviewed +
PositiveRegulation modified +
PathwayDiagram modified +
Requirement modified +
NonsenseMutation modified +
EntityWithAccessionedSequence modified +
Complex modified +
FrontPage modified +
StableIdentifierHistory modified +
CellDevelopmentStep modified +
ExternalOntology modified +
DatabaseObject modified +
Species modified +
ReferenceSequence modified +
FragmentInsertionModification modified +
PhysicalEntityCellType modified +
FragmentDeletionModification modified +
ModifiedResidue modified +
_Release modified +
ReferenceGroup modified +
Taxon modified +
GeneticallyModifiedResidue modified +
GO_BiologicalProcess modified +
Drug modified +
CatalystActivityReference modified +
Compartment modified +
ControlReference modified +
GenomeEncodedEntity modified +
ReplacedResidue modified +
EntitySet modified +
InteractionEvent modified +
Affiliation modified +
RNADrug modified +
CellType modified +
RegulationReference modified +
Polymer modified +
ReferenceTherapeutic modified +
CatalystActivity modified +
RetractionStatus modified +
FunctionalStatus modified +
PhysicalEntity modified +
CandidateSet modified +
Event modified +
BlackBoxEvent modified +
FunctionalStatusType modified +
DatabaseIdentifier modified +
Depolymerisation modified +
DefinedSet modified +
Book modified +
ReactionlikeEvent modified +
GO_CellularComponent modified +
_Deleted modified +
EntityFunctionalStatus modified +
Reaction modified +
ControlledVocabulary modified +
ReactionType modified +
NegativeGeneExpressionRegulation modified +
ReferenceEntity modified +
Disease modified +
Publication modified +
CrosslinkedResidue modified +
FragmentModification modified +
GO_MolecularFunction modified +
ChemicalDrug modified +
SequenceOntology modified +
ReferenceIsoform modified +
FailedReaction modified +
Pathway modified +
DeletedControlledVocabulary modified +
Cell modified +
TranscriptionalModification modified +
StableIdentifierReleaseStatus modified +
ReferenceRNASequence modified +
GroupModifiedResidue modified +
ReferenceMolecule modified +
_UpdateTracker modified +
AbstractModifiedResidue modified +
_DeletedInstance modified +
TranslationalModification modified +
ReferenceDatabase modified +
Polymerisation modified +
IntraChainCrosslinkedResidue modified +
NegativePrecedingEvent modified +
Summation modified +
Anatomy modified +
ReferenceGeneProduct modified +
InstanceEdit modified +
ProteinDrug modified +
OtherEntity modified +
FragmentReplacedModification modified +
ModifiedNucleotide modified +
PsiMod modified +
Person modified +
StableIdentifier modified +
Figure modified +
ReviewStatus modified +
LiteratureReference modified +
PositiveGeneExpressionRegulation modified +
CellLineagePath modified +
DrugActionType modified +
Regulation modified +
ReferenceDNASequence modified +
NegativeRegulation modified +
URL modified +
SimpleEntity modified +
MarkerReference modified +
EvidenceType modified +
NegativePrecedingEventReason modified +
InterChainCrosslinkedResidue modified +
CandidateSet authored 1
OtherEntity authored 1
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
Reaction authored +
Polymer authored 1
Complex authored 1
ProteinDrug authored 1
CellDevelopmentStep authored +
EntitySet authored 1
InteractionEvent authored +
Polymerisation authored +
RNADrug authored 1
SimpleEntity authored 1
GenomeEncodedEntity authored 1
ReactionlikeEvent authored +
FailedReaction authored +
Pathway authored +
Depolymerisation authored +
Cell authored 1
DefinedSet authored 1
Event authored +
ChemicalDrug authored 1
BlackBoxEvent authored +
Drug authored 1
CellLineagePath authored +
Pathway structureModified +
FailedReaction structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
Event structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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