Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReferenceGroup created 1
Book created 1
InteractionEvent created 1
Regulation created 1
GenomeEncodedEntity created 1
Drug created 1
GeneticallyModifiedResidue created 1
Summation created 1
LiteratureReference created 1
CellType created 1
FunctionalStatus created 1
ProteinDrug created 1
Anatomy created 1
EntityFunctionalStatus created 1
Polymerisation created 1
EvidenceType created 1
RegulationReference created 1
TranscriptionalModification created 1
_UpdateTracker created 1
TranslationalModification created 1
OtherEntity created 1
IntraChainCrosslinkedResidue created 1
EntitySet created 1
NegativeGeneExpressionRegulation created 1
ControlledVocabulary created 1
FragmentDeletionModification created 1
ReferenceDatabase created 1
ReactionlikeEvent created 1
FrontPage created 1
DeletedControlledVocabulary created 1
ReviewStatus created 1
ReferenceIsoform created 1
CatalystActivityReference created 1
Depolymerisation created 1
_Deleted created 1
Cell created 1
Species created 1
ExternalOntology created 1
NegativePrecedingEventReason created 1
RetractionStatus created 1
ModifiedNucleotide created 1
FragmentInsertionModification created 1
GO_BiologicalProcess created 1
NegativeRegulation created 1
Requirement created 1
DatabaseIdentifier created 1
InterChainCrosslinkedResidue created 1
CellLineagePath created 1
NonsenseMutation created 1
SimpleEntity created 1
MarkerReference created 1
GO_MolecularFunction created 1
Figure created 1
Disease created 1
ReferenceGeneProduct created 1
PhysicalEntity created 1
SequenceOntology created 1
PositiveRegulation created 1
DatabaseObject created 1
PathwayDiagram created 1
ReferenceDNASequence created 1
StableIdentifierHistory created 1
Person created 1
ChemicalDrug created 1
Affiliation created 1
ReferenceSequence created 1
CellDevelopmentStep created 1
RNADrug created 1
ReferenceRNASequence created 1
GO_CellularComponent created 1
StableIdentifierReleaseStatus created 1
CandidateSet created 1
BlackBoxEvent created 1
Pathway created 1
_DeletedInstance created 1
Polymer created 1
Publication created 1
CrosslinkedResidue created 1
PhysicalEntityCellType created 1
PsiMod created 1
NegativePrecedingEvent created 1
Event created 1
DefinedSet created 1
FragmentReplacedModification created 1
FailedReaction created 1
Taxon created 1
InstanceEdit created 1
GroupModifiedResidue created 1
ReferenceMolecule created 1
CatalystActivity created 1
Reaction created 1
ControlReference created 1
ModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
URL created 1
ReferenceTherapeutic created 1
ReplacedResidue created 1
FunctionalStatusType created 1
StableIdentifier created 1
EntityWithAccessionedSequence created 1
ReferenceEntity created 1
_Release created 1
AbstractModifiedResidue created 1
FragmentModification created 1
Compartment created 1
Complex created 1
DrugActionType created 1
ReactionType created 1
InteractionEvent authored +
Reaction authored +
PhysicalEntity authored 1
Event authored +
DefinedSet authored 1
FailedReaction authored +
EntitySet authored 1
ReactionlikeEvent authored +
GenomeEncodedEntity authored 1
Drug authored 1
ChemicalDrug authored 1
ProteinDrug authored 1
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
BlackBoxEvent authored +
CellDevelopmentStep authored +
Depolymerisation authored +
RNADrug authored 1
Cell authored 1
OtherEntity authored 1
Complex authored 1
CellLineagePath authored +
SimpleEntity authored 1
Polymerisation authored +
Pathway authored +
Polymer authored 1
Pathway structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
Event structureModified +
BlackBoxEvent structureModified +
Reaction structureModified +
InteractionEvent structureModified +
DefinedSet edited +
EntitySet edited +
FailedReaction edited +
PhysicalEntity edited +
Event edited +
Reaction edited +
InteractionEvent edited +
ChemicalDrug edited +
Drug edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
Depolymerisation edited +
RNADrug edited +
Cell edited +
CellDevelopmentStep edited +
CandidateSet edited +
BlackBoxEvent edited +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
Polymer edited +
Pathway edited +
Polymerisation edited +
CellLineagePath edited +
SimpleEntity edited +
Complex edited +
OtherEntity edited +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
_Deleted replacementInstances +
EntityWithAccessionedSequence reviewed +
ProteinDrug reviewed +
BlackBoxEvent reviewed +
CandidateSet reviewed +
CellDevelopmentStep reviewed +
Cell reviewed +
Depolymerisation reviewed +
RNADrug reviewed +
OtherEntity reviewed +
Complex reviewed +
SimpleEntity reviewed +
CellLineagePath reviewed +
Pathway reviewed +
Polymerisation reviewed +
Polymer reviewed +
InteractionEvent reviewed +
Reaction reviewed +
Event reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
EntitySet reviewed +
DefinedSet reviewed +
ReactionlikeEvent reviewed +
Drug reviewed +
GenomeEncodedEntity reviewed +
ChemicalDrug reviewed +
ChemicalDrug revised +
ReactionlikeEvent revised +
Drug revised +
GenomeEncodedEntity revised +
PhysicalEntity revised +
Event revised +
EntitySet revised +
FailedReaction revised +
DefinedSet revised +
InteractionEvent revised +
Reaction revised +
Polymerisation revised +
Pathway revised +
Polymer revised +
Complex revised +
OtherEntity revised +
SimpleEntity revised +
CellLineagePath revised +
CellDevelopmentStep revised +
Cell revised +
RNADrug revised +
Depolymerisation revised +
EntityWithAccessionedSequence revised +
ProteinDrug revised +
BlackBoxEvent revised +
CandidateSet revised +
ControlReference modified +
URL modified +
PositiveGeneExpressionRegulation modified +
ModifiedResidue modified +
ReplacedResidue modified +
ReferenceTherapeutic modified +
DefinedSet modified +
FragmentReplacedModification modified +
FailedReaction modified +
PsiMod modified +
Event modified +
NegativePrecedingEvent modified +
CatalystActivity modified +
Reaction modified +
Taxon modified +
InstanceEdit modified +
GroupModifiedResidue modified +
ReferenceMolecule modified +
FragmentModification modified +
Compartment modified +
ReactionType modified +
Complex modified +
DrugActionType modified +
ReferenceEntity modified +
_Release modified +
AbstractModifiedResidue modified +
FunctionalStatusType modified +
EntityWithAccessionedSequence modified +
StableIdentifier modified +
ChemicalDrug modified +
ReferenceSequence modified +
Affiliation modified +
PathwayDiagram modified +
DatabaseObject modified +
StableIdentifierHistory modified +
ReferenceDNASequence modified +
ReferenceGeneProduct modified +
Disease modified +
PhysicalEntity modified +
SequenceOntology modified +
PositiveRegulation modified +
Person modified +
Polymer modified +
Publication modified +
Pathway modified +
_DeletedInstance modified +
CrosslinkedResidue modified +
PhysicalEntityCellType modified +
RNADrug modified +
ReferenceRNASequence modified +
CellDevelopmentStep modified +
StableIdentifierReleaseStatus modified +
CandidateSet modified +
BlackBoxEvent modified +
GO_CellularComponent modified +
FragmentDeletionModification modified +
ReactionlikeEvent modified +
ReferenceDatabase modified +
FrontPage modified +
DeletedControlledVocabulary modified +
ReviewStatus modified +
EntitySet modified +
IntraChainCrosslinkedResidue modified +
ControlledVocabulary modified +
NegativeGeneExpressionRegulation modified +
GO_BiologicalProcess modified +
Requirement modified +
NegativeRegulation modified +
RetractionStatus modified +
FragmentInsertionModification modified +
ModifiedNucleotide modified +
NonsenseMutation modified +
CellLineagePath modified +
MarkerReference modified +
GO_MolecularFunction modified +
Figure modified +
SimpleEntity modified +
DatabaseIdentifier modified +
InterChainCrosslinkedResidue modified +
Depolymerisation modified +
_Deleted modified +
Cell modified +
CatalystActivityReference modified +
ReferenceIsoform modified +
Species modified +
ExternalOntology modified +
NegativePrecedingEventReason modified +
Regulation modified +
Drug modified +
GenomeEncodedEntity modified +
GeneticallyModifiedResidue modified +
ReferenceGroup modified +
InteractionEvent modified +
Book modified +
RegulationReference modified +
TranscriptionalModification modified +
_UpdateTracker modified +
TranslationalModification modified +
Polymerisation modified +
EvidenceType modified +
OtherEntity modified +
CellType modified +
LiteratureReference modified +
FunctionalStatus modified +
Summation modified +
EntityFunctionalStatus modified +
ProteinDrug modified +
Anatomy modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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