Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
ReactionlikeEvent reviewed +
Polymer reviewed +
Polymerisation reviewed +
GenomeEncodedEntity reviewed +
Depolymerisation reviewed +
OtherEntity reviewed +
Event reviewed +
EntitySet reviewed +
Reaction reviewed +
BlackBoxEvent reviewed +
Complex reviewed +
ProteinDrug reviewed +
CandidateSet reviewed +
CellDevelopmentStep reviewed +
FailedReaction reviewed +
RNADrug reviewed +
CellLineagePath reviewed +
ChemicalDrug reviewed +
InteractionEvent reviewed +
Drug reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
Cell reviewed +
SimpleEntity reviewed +
DefinedSet reviewed +
_UpdateTracker created 1
_Release created 1
GeneticallyModifiedResidue created 1
FragmentModification created 1
Summation created 1
ControlReference created 1
EntitySet created 1
AbstractModifiedResidue created 1
Disease created 1
ReferenceTherapeutic created 1
MarkerReference created 1
ReviewStatus created 1
Book created 1
IntraChainCrosslinkedResidue created 1
ReferenceDNASequence created 1
EntityFunctionalStatus created 1
NegativePrecedingEvent created 1
NegativeRegulation created 1
Anatomy created 1
PositiveRegulation created 1
PositiveGeneExpressionRegulation created 1
Taxon created 1
PhysicalEntity created 1
ReferenceSequence created 1
PathwayDiagram created 1
ReferenceRNASequence created 1
ModifiedResidue created 1
DatabaseIdentifier created 1
NegativeGeneExpressionRegulation created 1
Event created 1
GenomeEncodedEntity created 1
FunctionalStatusType created 1
PhysicalEntityCellType created 1
ReactionlikeEvent created 1
InterChainCrosslinkedResidue created 1
ReferenceIsoform created 1
PsiMod created 1
ExternalOntology created 1
Pathway created 1
GO_BiologicalProcess created 1
DefinedSet created 1
SimpleEntity created 1
ReferenceEntity created 1
CellLineagePath created 1
GroupModifiedResidue created 1
EntityWithAccessionedSequence created 1
DrugActionType created 1
URL created 1
ProteinDrug created 1
Complex created 1
DeletedControlledVocabulary created 1
Polymer created 1
Regulation created 1
CatalystActivityReference created 1
CrosslinkedResidue created 1
NegativePrecedingEventReason created 1
ControlledVocabulary created 1
Reaction created 1
FragmentReplacedModification created 1
RetractionStatus created 1
StableIdentifierReleaseStatus created 1
TranslationalModification created 1
EvidenceType created 1
NonsenseMutation created 1
RNADrug created 1
FailedReaction created 1
RegulationReference created 1
LiteratureReference created 1
ReferenceGeneProduct created 1
CatalystActivity created 1
ChemicalDrug created 1
StableIdentifier created 1
Requirement created 1
FragmentInsertionModification created 1
_Deleted created 1
GO_MolecularFunction created 1
FrontPage created 1
CellDevelopmentStep created 1
ModifiedNucleotide created 1
ReplacedResidue created 1
CandidateSet created 1
ReferenceGroup created 1
Depolymerisation created 1
OtherEntity created 1
Polymerisation created 1
ReferenceMolecule created 1
GO_CellularComponent created 1
InstanceEdit created 1
_DeletedInstance created 1
Person created 1
SequenceOntology created 1
StableIdentifierHistory created 1
BlackBoxEvent created 1
Publication created 1
Affiliation created 1
Cell created 1
Species created 1
CellType created 1
TranscriptionalModification created 1
DatabaseObject created 1
Figure created 1
FunctionalStatus created 1
ReferenceDatabase created 1
ReactionType created 1
InteractionEvent created 1
Drug created 1
FragmentDeletionModification created 1
Compartment created 1
PhysicalEntity authored 1
Drug authored 1
EntityWithAccessionedSequence authored 1
InteractionEvent authored +
ChemicalDrug authored 1
CellLineagePath authored +
RNADrug authored 1
FailedReaction authored +
SimpleEntity authored 1
DefinedSet authored 1
Cell authored 1
Pathway authored +
BlackBoxEvent authored +
Reaction authored +
Depolymerisation authored +
GenomeEncodedEntity authored 1
OtherEntity authored 1
Event authored +
EntitySet authored 1
Polymerisation authored +
Polymer authored 1
ReactionlikeEvent authored +
CellDevelopmentStep authored +
CandidateSet authored 1
ProteinDrug authored 1
Complex authored 1
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Reaction internalReviewed +
StableIdentifier modified +
GO_MolecularFunction modified +
FragmentInsertionModification modified +
Requirement modified +
_Deleted modified +
CellDevelopmentStep modified +
ModifiedNucleotide modified +
FrontPage modified +
ReplacedResidue modified +
CandidateSet modified +
Polymerisation modified +
Depolymerisation modified +
ReferenceGroup modified +
OtherEntity modified +
GO_CellularComponent modified +
ReferenceMolecule modified +
StableIdentifierHistory modified +
BlackBoxEvent modified +
InstanceEdit modified +
_DeletedInstance modified +
SequenceOntology modified +
Person modified +
Affiliation modified +
Publication modified +
Species modified +
Cell modified +
CellType modified +
DatabaseObject modified +
TranscriptionalModification modified +
Figure modified +
ReferenceDatabase modified +
FunctionalStatus modified +
InteractionEvent modified +
Drug modified +
ReactionType modified +
Compartment modified +
FragmentDeletionModification modified +
ProteinDrug modified +
URL modified +
Complex modified +
DeletedControlledVocabulary modified +
Polymer modified +
Regulation modified +
CatalystActivityReference modified +
CrosslinkedResidue modified +
Reaction modified +
ControlledVocabulary modified +
NegativePrecedingEventReason modified +
FragmentReplacedModification modified +
RetractionStatus modified +
EvidenceType modified +
StableIdentifierReleaseStatus modified +
TranslationalModification modified +
RNADrug modified +
NonsenseMutation modified +
RegulationReference modified +
LiteratureReference modified +
FailedReaction modified +
ReferenceGeneProduct modified +
ChemicalDrug modified +
CatalystActivity modified +
ReferenceSequence modified +
ReferenceRNASequence modified +
PathwayDiagram modified +
DatabaseIdentifier modified +
ModifiedResidue modified +
NegativeGeneExpressionRegulation modified +
FunctionalStatusType modified +
Event modified +
GenomeEncodedEntity modified +
ReactionlikeEvent modified +
PhysicalEntityCellType modified +
ReferenceIsoform modified +
InterChainCrosslinkedResidue modified +
PsiMod modified +
Pathway modified +
ExternalOntology modified +
GO_BiologicalProcess modified +
SimpleEntity modified +
ReferenceEntity modified +
DefinedSet modified +
CellLineagePath modified +
EntityWithAccessionedSequence modified +
GroupModifiedResidue modified +
DrugActionType modified +
_Release modified +
_UpdateTracker modified +
Summation modified +
GeneticallyModifiedResidue modified +
FragmentModification modified +
EntitySet modified +
Disease modified +
AbstractModifiedResidue modified +
ControlReference modified +
MarkerReference modified +
ReferenceTherapeutic modified +
ReviewStatus modified +
Book modified +
EntityFunctionalStatus modified +
ReferenceDNASequence modified +
IntraChainCrosslinkedResidue modified +
NegativeRegulation modified +
NegativePrecedingEvent modified +
Anatomy modified +
PositiveRegulation modified +
PositiveGeneExpressionRegulation modified +
Taxon modified +
PhysicalEntity modified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Reaction structureModified +
Polymerisation structureModified +
Event structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
BlackBoxEvent revised +
Reaction revised +
OtherEntity revised +
Depolymerisation revised +
EntitySet revised +
Event revised +
GenomeEncodedEntity revised +
Polymerisation revised +
Polymer revised +
ReactionlikeEvent revised +
CellDevelopmentStep revised +
CandidateSet revised +
ProteinDrug revised +
Complex revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
Drug revised +
InteractionEvent revised +
ChemicalDrug revised +
CellLineagePath revised +
RNADrug revised +
FailedReaction revised +
DefinedSet revised +
SimpleEntity revised +
Cell revised +
Pathway revised +
Polymer edited +
ReactionlikeEvent edited +
Event edited +
Depolymerisation edited +
OtherEntity edited +
EntitySet edited +
GenomeEncodedEntity edited +
Polymerisation edited +
Reaction edited +
BlackBoxEvent edited +
Complex edited +
ProteinDrug edited +
CandidateSet edited +
CellDevelopmentStep edited +
FailedReaction edited +
CellLineagePath edited +
RNADrug edited +
ChemicalDrug edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
Drug edited +
InteractionEvent edited +
Cell edited +
Pathway edited +
DefinedSet edited +
SimpleEntity edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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