Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
Event structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
FailedReaction structureModified +
Reaction structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
Pathway modified +
ReferenceDNASequence modified +
PositiveRegulation modified +
FragmentInsertionModification modified +
FunctionalStatusType modified +
CatalystActivityReference modified +
ReactionType modified +
ReferenceGroup modified +
_DeletedInstance modified +
FailedReaction modified +
Affiliation modified +
Person modified +
Polymerisation modified +
DatabaseObject modified +
ReviewStatus modified +
SequenceOntology modified +
Polymer modified +
CatalystActivity modified +
ReferenceSequence modified +
ReferenceTherapeutic modified +
AbstractModifiedResidue modified +
CellType modified +
InterChainCrosslinkedResidue modified +
ControlledVocabulary modified +
ProteinDrug modified +
Compartment modified +
GroupModifiedResidue modified +
GO_MolecularFunction modified +
ModifiedNucleotide modified +
DatabaseIdentifier modified +
PhysicalEntity modified +
_UpdateTracker modified +
NegativeGeneExpressionRegulation modified +
TranslationalModification modified +
EntityFunctionalStatus modified +
DeletedControlledVocabulary modified +
Disease modified +
EntitySet modified +
Cell modified +
LiteratureReference modified +
OtherEntity modified +
ReferenceEntity modified +
TranscriptionalModification modified +
GO_CellularComponent modified +
RegulationReference modified +
PsiMod modified +
Reaction modified +
CandidateSet modified +
BlackBoxEvent modified +
Summation modified +
Complex modified +
Book modified +
ReferenceDatabase modified +
StableIdentifierHistory modified +
StableIdentifierReleaseStatus modified +
CrosslinkedResidue modified +
Event modified +
ReactionlikeEvent modified +
EvidenceType modified +
Drug modified +
GenomeEncodedEntity modified +
Depolymerisation modified +
NegativePrecedingEventReason modified +
Regulation modified +
ReferenceIsoform modified +
URL modified +
ChemicalDrug modified +
EntityWithAccessionedSequence modified +
ExternalOntology modified +
InstanceEdit modified +
RetractionStatus modified +
CellDevelopmentStep modified +
GO_BiologicalProcess modified +
SimpleEntity modified +
PathwayDiagram modified +
GeneticallyModifiedResidue modified +
Species modified +
DefinedSet modified +
Anatomy modified +
ControlReference modified +
PhysicalEntityCellType modified +
ReferenceRNASequence modified +
StableIdentifier modified +
Requirement modified +
Figure modified +
_Release modified +
_Deleted modified +
Publication modified +
FrontPage modified +
InteractionEvent modified +
RNADrug modified +
PositiveGeneExpressionRegulation modified +
Taxon modified +
MarkerReference modified +
FragmentDeletionModification modified +
IntraChainCrosslinkedResidue modified +
ReferenceGeneProduct modified +
CellLineagePath modified +
DrugActionType modified +
FunctionalStatus modified +
NegativeRegulation modified +
NegativePrecedingEvent modified +
ReferenceMolecule modified +
NonsenseMutation modified +
ModifiedResidue modified +
FragmentReplacedModification modified +
ReplacedResidue modified +
FragmentModification modified +
Polymerisation reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
ProteinDrug reviewed +
SimpleEntity reviewed +
Polymer reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
EntitySet reviewed +
Depolymerisation reviewed +
Pathway reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
Drug reviewed +
PhysicalEntity reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
Reaction reviewed +
CandidateSet reviewed +
FailedReaction reviewed +
InteractionEvent reviewed +
RNADrug reviewed +
OtherEntity reviewed +
Cell reviewed +
NegativePrecedingEvent created 1
FragmentModification created 1
ReplacedResidue created 1
ModifiedResidue created 1
FragmentReplacedModification created 1
NonsenseMutation created 1
ReferenceMolecule created 1
DrugActionType created 1
FunctionalStatus created 1
NegativeRegulation created 1
PositiveGeneExpressionRegulation created 1
Taxon created 1
InteractionEvent created 1
RNADrug created 1
CellLineagePath created 1
ReferenceGeneProduct created 1
IntraChainCrosslinkedResidue created 1
FragmentDeletionModification created 1
MarkerReference created 1
_Deleted created 1
_Release created 1
Requirement created 1
Figure created 1
FrontPage created 1
Publication created 1
DefinedSet created 1
Species created 1
GeneticallyModifiedResidue created 1
PathwayDiagram created 1
SimpleEntity created 1
StableIdentifier created 1
ReferenceRNASequence created 1
PhysicalEntityCellType created 1
ControlReference created 1
Anatomy created 1
InstanceEdit created 1
GO_BiologicalProcess created 1
CellDevelopmentStep created 1
RetractionStatus created 1
ReferenceIsoform created 1
URL created 1
Regulation created 1
ExternalOntology created 1
ChemicalDrug created 1
EntityWithAccessionedSequence created 1
Drug created 1
EvidenceType created 1
ReactionlikeEvent created 1
Event created 1
NegativePrecedingEventReason created 1
Depolymerisation created 1
GenomeEncodedEntity created 1
StableIdentifierHistory created 1
Book created 1
ReferenceDatabase created 1
CrosslinkedResidue created 1
StableIdentifierReleaseStatus created 1
Summation created 1
BlackBoxEvent created 1
Complex created 1
ReferenceEntity created 1
OtherEntity created 1
LiteratureReference created 1
Cell created 1
PsiMod created 1
Reaction created 1
CandidateSet created 1
RegulationReference created 1
GO_CellularComponent created 1
TranscriptionalModification created 1
NegativeGeneExpressionRegulation created 1
GO_MolecularFunction created 1
PhysicalEntity created 1
ModifiedNucleotide created 1
DatabaseIdentifier created 1
_UpdateTracker created 1
GroupModifiedResidue created 1
Disease created 1
EntitySet created 1
DeletedControlledVocabulary created 1
TranslationalModification created 1
EntityFunctionalStatus created 1
CatalystActivity created 1
Polymer created 1
SequenceOntology created 1
Compartment created 1
ControlledVocabulary created 1
ProteinDrug created 1
CellType created 1
InterChainCrosslinkedResidue created 1
AbstractModifiedResidue created 1
ReferenceTherapeutic created 1
ReferenceSequence created 1
Person created 1
ReviewStatus created 1
DatabaseObject created 1
Polymerisation created 1
ReferenceGroup created 1
_DeletedInstance created 1
ReactionType created 1
Affiliation created 1
FailedReaction created 1
ReferenceDNASequence created 1
Pathway created 1
CatalystActivityReference created 1
FunctionalStatusType created 1
PositiveRegulation created 1
FragmentInsertionModification created 1
_Deleted replacementInstances +
DefinedSet revised +
SimpleEntity revised +
Polymer revised +
ProteinDrug revised +
BlackBoxEvent revised +
CellDevelopmentStep revised +
Complex revised +
Polymerisation revised +
Cell revised +
OtherEntity revised +
InteractionEvent revised +
RNADrug revised +
FailedReaction revised +
Reaction revised +
CandidateSet revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
ChemicalDrug revised +
PhysicalEntity revised +
Drug revised +
Event revised +
Pathway revised +
ReactionlikeEvent revised +
EntitySet revised +
Depolymerisation revised +
GenomeEncodedEntity revised +
ProteinDrug edited +
SimpleEntity edited +
Polymer edited +
DefinedSet edited +
Polymerisation edited +
Complex edited +
CellDevelopmentStep edited +
BlackBoxEvent edited +
EntityWithAccessionedSequence edited +
ChemicalDrug edited +
Reaction edited +
CellLineagePath edited +
CandidateSet edited +
FailedReaction edited +
RNADrug edited +
InteractionEvent edited +
Cell edited +
OtherEntity edited +
GenomeEncodedEntity edited +
Depolymerisation edited +
EntitySet edited +
ReactionlikeEvent edited +
Pathway edited +
Event edited +
Drug edited +
PhysicalEntity edited +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
Polymer authored 1
SimpleEntity authored 1
DefinedSet authored 1
ProteinDrug authored 1
BlackBoxEvent authored +
Polymerisation authored +
CellDevelopmentStep authored +
Complex authored 1
OtherEntity authored 1
Cell authored 1
RNADrug authored 1
InteractionEvent authored +
ChemicalDrug authored 1
EntityWithAccessionedSequence authored 1
FailedReaction authored +
Reaction authored +
CandidateSet authored 1
CellLineagePath authored +
Event authored +
ReactionlikeEvent authored +
Pathway authored +
PhysicalEntity authored 1
Drug authored 1
GenomeEncodedEntity authored 1
Depolymerisation authored +
EntitySet authored 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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