Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Cell created 1
ReferenceDNASequence created 1
ModifiedNucleotide created 1
PhysicalEntity created 1
ReferenceRNASequence created 1
NegativeGeneExpressionRegulation created 1
EntityWithAccessionedSequence created 1
Book created 1
_UpdateTracker created 1
ModifiedResidue created 1
ControlReference created 1
GroupModifiedResidue created 1
CatalystActivityReference created 1
DeletedControlledVocabulary created 1
Pathway created 1
ReferenceGroup created 1
Drug created 1
FailedReaction created 1
EntitySet created 1
Anatomy created 1
ReferenceGeneProduct created 1
GO_BiologicalProcess created 1
ReferenceDatabase created 1
Event created 1
DefinedSet created 1
_Deleted created 1
FunctionalStatusType created 1
Compartment created 1
PhysicalEntityCellType created 1
DatabaseIdentifier created 1
Disease created 1
Summation created 1
BlackBoxEvent created 1
InterChainCrosslinkedResidue created 1
_Release created 1
ReactionlikeEvent created 1
_DeletedInstance created 1
ControlledVocabulary created 1
DrugActionType created 1
OtherEntity created 1
TranslationalModification created 1
ReferenceEntity created 1
Polymerisation created 1
Regulation created 1
FragmentDeletionModification created 1
IntraChainCrosslinkedResidue created 1
ReferenceTherapeutic created 1
Affiliation created 1
ExternalOntology created 1
ReferenceMolecule created 1
SimpleEntity created 1
AbstractModifiedResidue created 1
Species created 1
TranscriptionalModification created 1
PathwayDiagram created 1
Taxon created 1
InstanceEdit created 1
PsiMod created 1
PositiveRegulation created 1
NegativeRegulation created 1
GeneticallyModifiedResidue created 1
GO_MolecularFunction created 1
NegativePrecedingEvent created 1
NegativePrecedingEventReason created 1
StableIdentifierHistory created 1
CellType created 1
RegulationReference created 1
CellDevelopmentStep created 1
InteractionEvent created 1
CellLineagePath created 1
EvidenceType created 1
ReferenceIsoform created 1
FunctionalStatus created 1
URL created 1
StableIdentifier created 1
Complex created 1
CatalystActivity created 1
Depolymerisation created 1
CandidateSet created 1
FragmentModification created 1
RetractionStatus created 1
GenomeEncodedEntity created 1
Person created 1
NonsenseMutation created 1
ChemicalDrug created 1
MarkerReference created 1
Figure created 1
LiteratureReference created 1
CrosslinkedResidue created 1
ReactionType created 1
RNADrug created 1
ProteinDrug created 1
ReferenceSequence created 1
Reaction created 1
SequenceOntology created 1
Publication created 1
StableIdentifierReleaseStatus created 1
Polymer created 1
EntityFunctionalStatus created 1
FrontPage created 1
Requirement created 1
FragmentInsertionModification created 1
ReplacedResidue created 1
ReviewStatus created 1
FragmentReplacedModification created 1
PositiveGeneExpressionRegulation created 1
DatabaseObject created 1
GO_CellularComponent created 1
RNADrug authored 1
BlackBoxEvent authored +
ProteinDrug authored 1
DefinedSet authored 1
Cell authored 1
PhysicalEntity authored 1
ReactionlikeEvent authored +
CellDevelopmentStep authored +
Polymer authored 1
CellLineagePath authored +
OtherEntity authored 1
InteractionEvent authored +
Reaction authored +
EntityWithAccessionedSequence authored 1
Complex authored 1
Pathway authored +
Depolymerisation authored +
Polymerisation authored +
FailedReaction authored +
EntitySet authored 1
ChemicalDrug authored 1
Event authored +
CandidateSet authored 1
GenomeEncodedEntity authored 1
Drug authored 1
SimpleEntity authored 1
Reaction revised +
EntityWithAccessionedSequence revised +
Polymer revised +
OtherEntity revised +
CellLineagePath revised +
InteractionEvent revised +
ReactionlikeEvent revised +
CellDevelopmentStep revised +
Cell revised +
PhysicalEntity revised +
DefinedSet revised +
RNADrug revised +
BlackBoxEvent revised +
ProteinDrug revised +
Drug revised +
SimpleEntity revised +
CandidateSet revised +
GenomeEncodedEntity revised +
ChemicalDrug revised +
Event revised +
EntitySet revised +
FailedReaction revised +
Polymerisation revised +
Depolymerisation revised +
Complex revised +
Pathway revised +
Species modified +
TranscriptionalModification modified +
PathwayDiagram modified +
Affiliation modified +
ReferenceTherapeutic modified +
ExternalOntology modified +
AbstractModifiedResidue modified +
ReferenceMolecule modified +
SimpleEntity modified +
Regulation modified +
FragmentDeletionModification modified +
IntraChainCrosslinkedResidue modified +
ReferenceEntity modified +
Polymerisation modified +
ReactionlikeEvent modified +
ControlledVocabulary modified +
_DeletedInstance modified +
DrugActionType modified +
TranslationalModification modified +
OtherEntity modified +
InterChainCrosslinkedResidue modified +
_Release modified +
Compartment modified +
Disease modified +
PhysicalEntityCellType modified +
DatabaseIdentifier modified +
Summation modified +
BlackBoxEvent modified +
DefinedSet modified +
_Deleted modified +
FunctionalStatusType modified +
FailedReaction modified +
Anatomy modified +
EntitySet modified +
ReferenceGeneProduct modified +
GO_BiologicalProcess modified +
ReferenceDatabase modified +
Event modified +
ReferenceGroup modified +
Drug modified +
DeletedControlledVocabulary modified +
Pathway modified +
ControlReference modified +
GroupModifiedResidue modified +
CatalystActivityReference modified +
Book modified +
_UpdateTracker modified +
ModifiedResidue modified +
EntityWithAccessionedSequence modified +
NegativeGeneExpressionRegulation modified +
ReferenceRNASequence modified +
Cell modified +
ReferenceDNASequence modified +
PhysicalEntity modified +
ModifiedNucleotide modified +
DatabaseObject modified +
GO_CellularComponent modified +
PositiveGeneExpressionRegulation modified +
EntityFunctionalStatus modified +
Requirement modified +
FrontPage modified +
FragmentInsertionModification modified +
FragmentReplacedModification modified +
ReplacedResidue modified +
ReviewStatus modified +
StableIdentifierReleaseStatus modified +
Polymer modified +
ReferenceSequence modified +
Reaction modified +
SequenceOntology modified +
Publication modified +
RNADrug modified +
ReactionType modified +
ProteinDrug modified +
MarkerReference modified +
Figure modified +
LiteratureReference modified +
CrosslinkedResidue modified +
NonsenseMutation modified +
ChemicalDrug modified +
CandidateSet modified +
FragmentModification modified +
RetractionStatus modified +
GenomeEncodedEntity modified +
Person modified +
Complex modified +
CatalystActivity modified +
Depolymerisation modified +
EvidenceType modified +
ReferenceIsoform modified +
URL modified +
FunctionalStatus modified +
StableIdentifier modified +
CellType modified +
CellDevelopmentStep modified +
RegulationReference modified +
InteractionEvent modified +
CellLineagePath modified +
GO_MolecularFunction modified +
NegativePrecedingEvent modified +
NegativePrecedingEventReason modified +
StableIdentifierHistory modified +
PsiMod modified +
PositiveRegulation modified +
NegativeRegulation modified +
GeneticallyModifiedResidue modified +
Taxon modified +
InstanceEdit modified +
Reaction internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Polymerisation structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
Pathway structureModified +
Reaction structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
_Deleted replacementInstances +
Pathway reviewed +
Complex reviewed +
Depolymerisation reviewed +
Polymerisation reviewed +
FailedReaction reviewed +
EntitySet reviewed +
Event reviewed +
ChemicalDrug reviewed +
GenomeEncodedEntity reviewed +
CandidateSet reviewed +
SimpleEntity reviewed +
Drug reviewed +
BlackBoxEvent reviewed +
ProteinDrug reviewed +
RNADrug reviewed +
DefinedSet reviewed +
PhysicalEntity reviewed +
Cell reviewed +
CellDevelopmentStep reviewed +
ReactionlikeEvent reviewed +
OtherEntity reviewed +
InteractionEvent reviewed +
CellLineagePath reviewed +
Polymer reviewed +
EntityWithAccessionedSequence reviewed +
Reaction reviewed +
Complex edited +
Pathway edited +
Depolymerisation edited +
Polymerisation edited +
EntitySet edited +
FailedReaction edited +
ChemicalDrug edited +
Event edited +
CandidateSet edited +
GenomeEncodedEntity edited +
Drug edited +
SimpleEntity edited +
RNADrug edited +
BlackBoxEvent edited +
ProteinDrug edited +
DefinedSet edited +
Cell edited +
PhysicalEntity edited +
ReactionlikeEvent edited +
CellDevelopmentStep edited +
Polymer edited +
InteractionEvent edited +
OtherEntity edited +
CellLineagePath edited +
EntityWithAccessionedSequence edited +
Reaction edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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