Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
SimpleEntity authored 1
FailedReaction authored +
GenomeEncodedEntity authored 1
Depolymerisation authored +
Reaction authored +
Polymer authored 1
Polymerisation authored +
Drug authored 1
EntitySet authored 1
RNADrug authored 1
CellLineagePath authored +
CandidateSet authored 1
DefinedSet authored 1
EntityWithAccessionedSequence authored 1
Pathway authored +
BlackBoxEvent authored +
InteractionEvent authored +
Cell authored 1
Event authored +
PhysicalEntity authored 1
ProteinDrug authored 1
ChemicalDrug authored 1
OtherEntity authored 1
Complex authored 1
CellDevelopmentStep authored +
ReactionlikeEvent authored +
SimpleEntity edited +
FailedReaction edited +
GenomeEncodedEntity edited +
CellLineagePath edited +
DefinedSet edited +
CandidateSet edited +
Pathway edited +
EntityWithAccessionedSequence edited +
Depolymerisation edited +
Reaction edited +
Drug edited +
Polymer edited +
EntitySet edited +
Polymerisation edited +
RNADrug edited +
PhysicalEntity edited +
ProteinDrug edited +
BlackBoxEvent edited +
InteractionEvent edited +
Cell edited +
Event edited +
Complex edited +
CellDevelopmentStep edited +
ReactionlikeEvent edited +
ChemicalDrug edited +
OtherEntity edited +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
_Deleted replacementInstances +
Event created 1
Figure created 1
GO_CellularComponent created 1
StableIdentifierHistory created 1
FunctionalStatusType created 1
Publication created 1
_DeletedInstance created 1
InstanceEdit created 1
ModifiedResidue created 1
PositiveGeneExpressionRegulation created 1
ReferenceDNASequence created 1
ReferenceMolecule created 1
ReferenceGroup created 1
NegativeGeneExpressionRegulation created 1
Species created 1
ExternalOntology created 1
Drug created 1
ControlReference created 1
FunctionalStatus created 1
InteractionEvent created 1
RegulationReference created 1
NegativeRegulation created 1
BlackBoxEvent created 1
Requirement created 1
EvidenceType created 1
ReactionType created 1
ReferenceEntity created 1
NonsenseMutation created 1
ReferenceIsoform created 1
NegativePrecedingEventReason created 1
InterChainCrosslinkedResidue created 1
OtherEntity created 1
FragmentInsertionModification created 1
CellType created 1
Summation created 1
GenomeEncodedEntity created 1
IntraChainCrosslinkedResidue created 1
SimpleEntity created 1
FragmentModification created 1
Polymer created 1
Taxon created 1
TranscriptionalModification created 1
SequenceOntology created 1
Pathway created 1
RetractionStatus created 1
CatalystActivityReference created 1
DatabaseObject created 1
CellLineagePath created 1
Book created 1
Cell created 1
FrontPage created 1
ReferenceRNASequence created 1
URL created 1
DeletedControlledVocabulary created 1
Disease created 1
DatabaseIdentifier created 1
TranslationalModification created 1
Regulation created 1
ReactionlikeEvent created 1
CellDevelopmentStep created 1
Complex created 1
StableIdentifierReleaseStatus created 1
LiteratureReference created 1
PositiveRegulation created 1
CrosslinkedResidue created 1
GroupModifiedResidue created 1
MarkerReference created 1
RNADrug created 1
Polymerisation created 1
EntitySet created 1
GO_MolecularFunction created 1
PsiMod created 1
ModifiedNucleotide created 1
Reaction created 1
EntityWithAccessionedSequence created 1
CatalystActivity created 1
AbstractModifiedResidue created 1
CandidateSet created 1
DefinedSet created 1
Affiliation created 1
GO_BiologicalProcess created 1
ReferenceSequence created 1
Anatomy created 1
GeneticallyModifiedResidue created 1
ProteinDrug created 1
PhysicalEntity created 1
NegativePrecedingEvent created 1
ControlledVocabulary created 1
_Release created 1
ChemicalDrug created 1
ReviewStatus created 1
StableIdentifier created 1
Person created 1
_Deleted created 1
ReplacedResidue created 1
EntityFunctionalStatus created 1
FailedReaction created 1
ReferenceGeneProduct created 1
PhysicalEntityCellType created 1
PathwayDiagram created 1
FragmentReplacedModification created 1
_UpdateTracker created 1
Depolymerisation created 1
FragmentDeletionModification created 1
ReferenceDatabase created 1
Compartment created 1
DrugActionType created 1
ReferenceTherapeutic created 1
StableIdentifierHistory modified +
_DeletedInstance modified +
InstanceEdit modified +
ModifiedResidue modified +
Publication modified +
FunctionalStatusType modified +
Event modified +
GO_CellularComponent modified +
Figure modified +
Drug modified +
ExternalOntology modified +
ControlReference modified +
ReferenceMolecule modified +
ReferenceGroup modified +
ReferenceDNASequence modified +
PositiveGeneExpressionRegulation modified +
Species modified +
NegativeGeneExpressionRegulation modified +
OtherEntity modified +
FragmentInsertionModification modified +
EvidenceType modified +
BlackBoxEvent modified +
Requirement modified +
RegulationReference modified +
NegativeRegulation modified +
FunctionalStatus modified +
InteractionEvent modified +
InterChainCrosslinkedResidue modified +
NegativePrecedingEventReason modified +
NonsenseMutation modified +
ReferenceIsoform modified +
ReferenceEntity modified +
ReactionType modified +
SequenceOntology modified +
TranscriptionalModification modified +
FragmentModification modified +
Polymer modified +
Taxon modified +
Book modified +
DatabaseObject modified +
CellLineagePath modified +
CatalystActivityReference modified +
RetractionStatus modified +
Pathway modified +
CellType modified +
IntraChainCrosslinkedResidue modified +
SimpleEntity modified +
Summation modified +
GenomeEncodedEntity modified +
Regulation modified +
DatabaseIdentifier modified +
TranslationalModification modified +
CellDevelopmentStep modified +
Complex modified +
ReactionlikeEvent modified +
FrontPage modified +
ReferenceRNASequence modified +
Cell modified +
Disease modified +
DeletedControlledVocabulary modified +
URL modified +
Reaction modified +
PsiMod modified +
GO_MolecularFunction modified +
ModifiedNucleotide modified +
Polymerisation modified +
EntitySet modified +
RNADrug modified +
MarkerReference modified +
Affiliation modified +
CandidateSet modified +
DefinedSet modified +
CatalystActivity modified +
AbstractModifiedResidue modified +
EntityWithAccessionedSequence modified +
CrosslinkedResidue modified +
PositiveRegulation modified +
LiteratureReference modified +
StableIdentifierReleaseStatus modified +
GroupModifiedResidue modified +
ChemicalDrug modified +
_Release modified +
ControlledVocabulary modified +
NegativePrecedingEvent modified +
StableIdentifier modified +
ReviewStatus modified +
GeneticallyModifiedResidue modified +
Anatomy modified +
ReferenceSequence modified +
GO_BiologicalProcess modified +
PhysicalEntity modified +
ProteinDrug modified +
FragmentReplacedModification modified +
_UpdateTracker modified +
Depolymerisation modified +
FragmentDeletionModification modified +
PathwayDiagram modified +
ReferenceTherapeutic modified +
DrugActionType modified +
Compartment modified +
ReferenceDatabase modified +
ReplacedResidue modified +
_Deleted modified +
Person modified +
PhysicalEntityCellType modified +
FailedReaction modified +
ReferenceGeneProduct modified +
EntityFunctionalStatus modified +
Event structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
Reaction structureModified +
Depolymerisation structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
CandidateSet revised +
DefinedSet revised +
EntityWithAccessionedSequence revised +
Pathway revised +
CellLineagePath revised +
Drug revised +
Polymer revised +
EntitySet revised +
Polymerisation revised +
RNADrug revised +
Reaction revised +
Depolymerisation revised +
FailedReaction revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
Complex revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
OtherEntity revised +
ChemicalDrug revised +
PhysicalEntity revised +
ProteinDrug revised +
InteractionEvent revised +
Event revised +
Cell revised +
BlackBoxEvent revised +
SimpleEntity reviewed +
FailedReaction reviewed +
GenomeEncodedEntity reviewed +
CellLineagePath reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
Depolymerisation reviewed +
Reaction reviewed +
Polymer reviewed +
Drug reviewed +
Polymerisation reviewed +
EntitySet reviewed +
RNADrug reviewed +
PhysicalEntity reviewed +
ProteinDrug reviewed +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
Cell reviewed +
Event reviewed +
CellDevelopmentStep reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
ChemicalDrug reviewed +
OtherEntity reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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