Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
RNADrug revised +
Pathway revised +
Reaction revised +
ChemicalDrug revised +
EntitySet revised +
Polymer revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
DefinedSet revised +
ReactionlikeEvent revised +
Drug revised +
Event revised +
FailedReaction revised +
CandidateSet revised +
Depolymerisation revised +
EntityWithAccessionedSequence revised +
ProteinDrug revised +
Polymerisation revised +
Cell revised +
Complex revised +
PhysicalEntity revised +
OtherEntity revised +
InteractionEvent revised +
CellDevelopmentStep revised +
CellLineagePath revised +
BlackBoxEvent revised +
ReferenceTherapeutic created 1
StableIdentifier created 1
ExternalOntology created 1
Figure created 1
PathwayDiagram created 1
GO_CellularComponent created 1
ControlReference created 1
SequenceOntology created 1
PositiveRegulation created 1
FrontPage created 1
FragmentInsertionModification created 1
StableIdentifierReleaseStatus created 1
OtherEntity created 1
Regulation created 1
Affiliation created 1
ProteinDrug created 1
RetractionStatus created 1
Taxon created 1
Anatomy created 1
Drug created 1
DatabaseIdentifier created 1
IntraChainCrosslinkedResidue created 1
URL created 1
Compartment created 1
GenomeEncodedEntity created 1
Species created 1
ReferenceGeneProduct created 1
CellType created 1
Polymer created 1
ReferenceDNASequence created 1
RNADrug created 1
ReferenceSequence created 1
ModifiedNucleotide created 1
ReferenceDatabase created 1
TranslationalModification created 1
Book created 1
ReviewStatus created 1
Publication created 1
InstanceEdit created 1
NegativePrecedingEventReason created 1
PhysicalEntity created 1
EvidenceType created 1
EntityWithAccessionedSequence created 1
NegativeRegulation created 1
Depolymerisation created 1
Polymerisation created 1
Complex created 1
Cell created 1
CrosslinkedResidue created 1
_UpdateTracker created 1
GroupModifiedResidue created 1
DatabaseObject created 1
Event created 1
FunctionalStatusType created 1
PhysicalEntityCellType created 1
TranscriptionalModification created 1
EntityFunctionalStatus created 1
AbstractModifiedResidue created 1
ReplacedResidue created 1
_Release created 1
DefinedSet created 1
GO_BiologicalProcess created 1
GO_MolecularFunction created 1
FragmentModification created 1
Requirement created 1
Reaction created 1
Person created 1
Pathway created 1
FunctionalStatus created 1
RegulationReference created 1
_Deleted created 1
MarkerReference created 1
ReferenceGroup created 1
CellDevelopmentStep created 1
FragmentReplacedModification created 1
NonsenseMutation created 1
ControlledVocabulary created 1
PositiveGeneExpressionRegulation created 1
ModifiedResidue created 1
ReactionlikeEvent created 1
ReferenceIsoform created 1
NegativeGeneExpressionRegulation created 1
CatalystActivityReference created 1
DeletedControlledVocabulary created 1
ReferenceEntity created 1
SimpleEntity created 1
PsiMod created 1
InterChainCrosslinkedResidue created 1
_DeletedInstance created 1
EntitySet created 1
ReactionType created 1
Summation created 1
ChemicalDrug created 1
BlackBoxEvent created 1
CatalystActivity created 1
ReferenceMolecule created 1
GeneticallyModifiedResidue created 1
CellLineagePath created 1
StableIdentifierHistory created 1
InteractionEvent created 1
Disease created 1
NegativePrecedingEvent created 1
LiteratureReference created 1
ReferenceRNASequence created 1
FragmentDeletionModification created 1
CandidateSet created 1
FailedReaction created 1
DrugActionType created 1
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent edited +
PhysicalEntity edited +
OtherEntity edited +
CellDevelopmentStep edited +
InteractionEvent edited +
CellLineagePath edited +
Depolymerisation edited +
EntityWithAccessionedSequence edited +
ProteinDrug edited +
Polymerisation edited +
Cell edited +
Complex edited +
Event edited +
Drug edited +
FailedReaction edited +
CandidateSet edited +
ReactionlikeEvent edited +
GenomeEncodedEntity edited +
SimpleEntity edited +
DefinedSet edited +
EntitySet edited +
Polymer edited +
RNADrug edited +
Pathway edited +
Reaction edited +
ChemicalDrug edited +
Pathway structureModified +
FailedReaction structureModified +
Event structureModified +
Reaction structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent authored +
CellDevelopmentStep authored +
OtherEntity authored 1
InteractionEvent authored +
CellLineagePath authored +
PhysicalEntity authored 1
ProteinDrug authored 1
Cell authored 1
Complex authored 1
Polymerisation authored +
Depolymerisation authored +
EntityWithAccessionedSequence authored 1
FailedReaction authored +
Drug authored 1
Event authored +
CandidateSet authored 1
ReactionlikeEvent authored +
SimpleEntity authored 1
DefinedSet authored 1
GenomeEncodedEntity authored 1
EntitySet authored 1
Polymer authored 1
Pathway authored +
Reaction authored +
ChemicalDrug authored 1
RNADrug authored 1
ReactionlikeEvent reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
DefinedSet reviewed +
EntitySet reviewed +
Polymer reviewed +
RNADrug reviewed +
Pathway reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
OtherEntity reviewed +
CellDevelopmentStep reviewed +
CellLineagePath reviewed +
Depolymerisation reviewed +
EntityWithAccessionedSequence reviewed +
ProteinDrug reviewed +
Cell reviewed +
Polymerisation reviewed +
Complex reviewed +
Event reviewed +
Drug reviewed +
CandidateSet reviewed +
FailedReaction reviewed +
_Deleted replacementInstances +
InteractionEvent modified +
StableIdentifierHistory modified +
CellLineagePath modified +
GeneticallyModifiedResidue modified +
ReferenceMolecule modified +
CatalystActivity modified +
BlackBoxEvent modified +
DrugActionType modified +
CandidateSet modified +
FailedReaction modified +
FragmentDeletionModification modified +
ReferenceRNASequence modified +
NegativePrecedingEvent modified +
LiteratureReference modified +
Disease modified +
SimpleEntity modified +
ReferenceEntity modified +
DeletedControlledVocabulary modified +
CatalystActivityReference modified +
ReferenceIsoform modified +
NegativeGeneExpressionRegulation modified +
ReactionlikeEvent modified +
ModifiedResidue modified +
ChemicalDrug modified +
Summation modified +
ReactionType modified +
EntitySet modified +
_DeletedInstance modified +
PsiMod modified +
InterChainCrosslinkedResidue modified +
ReferenceGroup modified +
CellDevelopmentStep modified +
MarkerReference modified +
_Deleted modified +
PositiveGeneExpressionRegulation modified +
ControlledVocabulary modified +
NonsenseMutation modified +
FragmentReplacedModification modified +
GO_BiologicalProcess modified +
_Release modified +
DefinedSet modified +
ReplacedResidue modified +
AbstractModifiedResidue modified +
EntityFunctionalStatus modified +
TranscriptionalModification modified +
PhysicalEntityCellType modified +
FunctionalStatusType modified +
FunctionalStatus modified +
Person modified +
Pathway modified +
RegulationReference modified +
Reaction modified +
Requirement modified +
FragmentModification modified +
GO_MolecularFunction modified +
EvidenceType modified +
PhysicalEntity modified +
NegativePrecedingEventReason modified +
InstanceEdit modified +
Publication modified +
ReviewStatus modified +
Book modified +
Event modified +
DatabaseObject modified +
_UpdateTracker modified +
GroupModifiedResidue modified +
CrosslinkedResidue modified +
Complex modified +
Cell modified +
Polymerisation modified +
Depolymerisation modified +
NegativeRegulation modified +
EntityWithAccessionedSequence modified +
CellType modified +
ReferenceGeneProduct modified +
Species modified +
Compartment modified +
GenomeEncodedEntity modified +
IntraChainCrosslinkedResidue modified +
URL modified +
TranslationalModification modified +
ReferenceDatabase modified +
ReferenceSequence modified +
RNADrug modified +
ModifiedNucleotide modified +
ReferenceDNASequence modified +
Polymer modified +
OtherEntity modified +
StableIdentifierReleaseStatus modified +
FragmentInsertionModification modified +
DatabaseIdentifier modified +
Anatomy modified +
Drug modified +
RetractionStatus modified +
Taxon modified +
ProteinDrug modified +
Affiliation modified +
Regulation modified +
Figure modified +
GO_CellularComponent modified +
PathwayDiagram modified +
ControlReference modified +
StableIdentifier modified +
ExternalOntology modified +
ReferenceTherapeutic modified +
FrontPage modified +
PositiveRegulation modified +
SequenceOntology modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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