Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
GenomeEncodedEntity revised +
Polymer revised +
Polymerisation revised +
FailedReaction revised +
BlackBoxEvent revised +
OtherEntity revised +
SimpleEntity revised +
DefinedSet revised +
Depolymerisation revised +
Event revised +
InteractionEvent revised +
Complex revised +
Reaction revised +
CandidateSet revised +
ReactionlikeEvent revised +
CellLineagePath revised +
RNADrug revised +
ChemicalDrug revised +
CellDevelopmentStep revised +
Pathway revised +
Drug revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
PhysicalEntity revised +
EntitySet revised +
Cell revised +
TranslationalModification modified +
FailedReaction modified +
BlackBoxEvent modified +
ExternalOntology modified +
GO_MolecularFunction modified +
CellType modified +
Affiliation modified +
Taxon modified +
ReferenceGroup modified +
InstanceEdit modified +
FunctionalStatus modified +
PositiveGeneExpressionRegulation modified +
GroupModifiedResidue modified +
EntityFunctionalStatus modified +
NegativePrecedingEvent modified +
RNADrug modified +
ProteinDrug modified +
PathwayDiagram modified +
ModifiedNucleotide modified +
GenomeEncodedEntity modified +
Compartment modified +
CatalystActivity modified +
DatabaseIdentifier modified +
DrugActionType modified +
Polymerisation modified +
MarkerReference modified +
ModifiedResidue modified +
IntraChainCrosslinkedResidue modified +
InteractionEvent modified +
ReferenceMolecule modified +
DeletedControlledVocabulary modified +
PsiMod modified +
SequenceOntology modified +
Pathway modified +
CellDevelopmentStep modified +
CatalystActivityReference modified +
_DeletedInstance modified +
PhysicalEntity modified +
EntityWithAccessionedSequence modified +
FragmentModification modified +
LiteratureReference modified +
_Release modified +
_UpdateTracker modified +
StableIdentifierHistory modified +
OtherEntity modified +
Anatomy modified +
RetractionStatus modified +
PositiveRegulation modified +
Depolymerisation modified +
NegativePrecedingEventReason modified +
DefinedSet modified +
Figure modified +
ReferenceIsoform modified +
GO_BiologicalProcess modified +
PhysicalEntityCellType modified +
EvidenceType modified +
URL modified +
StableIdentifier modified +
ReviewStatus modified +
TranscriptionalModification modified +
Reaction modified +
ReferenceDNASequence modified +
ChemicalDrug modified +
Person modified +
FragmentInsertionModification modified +
DatabaseObject modified +
FrontPage modified +
Drug modified +
FragmentDeletionModification modified +
Species modified +
NonsenseMutation modified +
ControlledVocabulary modified +
NegativeRegulation modified +
_Deleted modified +
InterChainCrosslinkedResidue modified +
GO_CellularComponent modified +
FunctionalStatusType modified +
ReferenceTherapeutic modified +
ReferenceRNASequence modified +
Polymer modified +
AbstractModifiedResidue modified +
Summation modified +
ReferenceDatabase modified +
NegativeGeneExpressionRegulation modified +
Publication modified +
RegulationReference modified +
SimpleEntity modified +
ReactionType modified +
Complex modified +
ReferenceGeneProduct modified +
Event modified +
CrosslinkedResidue modified +
CellLineagePath modified +
ReactionlikeEvent modified +
Book modified +
CandidateSet modified +
ControlReference modified +
StableIdentifierReleaseStatus modified +
ReferenceEntity modified +
ReferenceSequence modified +
ReplacedResidue modified +
Cell modified +
EntitySet modified +
FragmentReplacedModification modified +
Disease modified +
Regulation modified +
GeneticallyModifiedResidue modified +
Requirement modified +
_Deleted replacementInstances +
Event authored +
InteractionEvent authored +
Complex authored 1
SimpleEntity authored 1
DefinedSet authored 1
Depolymerisation authored +
Polymer authored 1
FailedReaction authored +
Polymerisation authored +
BlackBoxEvent authored +
OtherEntity authored 1
GenomeEncodedEntity authored 1
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
EntitySet authored 1
Cell authored 1
CellDevelopmentStep authored +
Pathway authored +
Drug authored 1
ProteinDrug authored 1
RNADrug authored 1
ChemicalDrug authored 1
Reaction authored +
CandidateSet authored 1
ReactionlikeEvent authored +
CellLineagePath authored +
GenomeEncodedEntity reviewed +
Polymer reviewed +
Polymerisation reviewed +
BlackBoxEvent reviewed +
FailedReaction reviewed +
OtherEntity reviewed +
Depolymerisation reviewed +
DefinedSet reviewed +
SimpleEntity reviewed +
InteractionEvent reviewed +
Event reviewed +
Complex reviewed +
ReactionlikeEvent reviewed +
Reaction reviewed +
CandidateSet reviewed +
CellLineagePath reviewed +
ChemicalDrug reviewed +
RNADrug reviewed +
Pathway reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
Drug reviewed +
PhysicalEntity reviewed +
EntityWithAccessionedSequence reviewed +
Cell reviewed +
EntitySet reviewed +
GO_CellularComponent created 1
FunctionalStatusType created 1
ReferenceTherapeutic created 1
ReferenceRNASequence created 1
Polymer created 1
AbstractModifiedResidue created 1
Summation created 1
ReferenceDatabase created 1
NegativeGeneExpressionRegulation created 1
RegulationReference created 1
Publication created 1
SimpleEntity created 1
ReactionType created 1
Complex created 1
ReferenceGeneProduct created 1
Event created 1
CrosslinkedResidue created 1
CellLineagePath created 1
ReactionlikeEvent created 1
Book created 1
ControlReference created 1
CandidateSet created 1
StableIdentifierReleaseStatus created 1
ReferenceEntity created 1
ReferenceSequence created 1
ReplacedResidue created 1
Cell created 1
EntitySet created 1
FragmentReplacedModification created 1
Regulation created 1
Disease created 1
Requirement created 1
GeneticallyModifiedResidue created 1
FragmentModification created 1
LiteratureReference created 1
_Release created 1
_UpdateTracker created 1
StableIdentifierHistory created 1
OtherEntity created 1
Anatomy created 1
RetractionStatus created 1
PositiveRegulation created 1
Depolymerisation created 1
NegativePrecedingEventReason created 1
DefinedSet created 1
Figure created 1
ReferenceIsoform created 1
GO_BiologicalProcess created 1
PhysicalEntityCellType created 1
EvidenceType created 1
URL created 1
StableIdentifier created 1
ReviewStatus created 1
TranscriptionalModification created 1
Reaction created 1
ReferenceDNASequence created 1
ChemicalDrug created 1
FragmentInsertionModification created 1
Person created 1
FrontPage created 1
DatabaseObject created 1
Drug created 1
FragmentDeletionModification created 1
Species created 1
NonsenseMutation created 1
ControlledVocabulary created 1
_Deleted created 1
NegativeRegulation created 1
InterChainCrosslinkedResidue created 1
GenomeEncodedEntity created 1
Compartment created 1
CatalystActivity created 1
DatabaseIdentifier created 1
DrugActionType created 1
Polymerisation created 1
MarkerReference created 1
ModifiedResidue created 1
IntraChainCrosslinkedResidue created 1
InteractionEvent created 1
ReferenceMolecule created 1
DeletedControlledVocabulary created 1
PsiMod created 1
SequenceOntology created 1
Pathway created 1
CellDevelopmentStep created 1
_DeletedInstance created 1
CatalystActivityReference created 1
PhysicalEntity created 1
EntityWithAccessionedSequence created 1
TranslationalModification created 1
BlackBoxEvent created 1
FailedReaction created 1
ExternalOntology created 1
GO_MolecularFunction created 1
CellType created 1
Affiliation created 1
Taxon created 1
ReferenceGroup created 1
FunctionalStatus created 1
InstanceEdit created 1
PositiveGeneExpressionRegulation created 1
EntityFunctionalStatus created 1
GroupModifiedResidue created 1
NegativePrecedingEvent created 1
RNADrug created 1
ProteinDrug created 1
ModifiedNucleotide created 1
PathwayDiagram created 1
GenomeEncodedEntity edited +
OtherEntity edited +
BlackBoxEvent edited +
Polymer edited +
Polymerisation edited +
FailedReaction edited +
Depolymerisation edited +
SimpleEntity edited +
DefinedSet edited +
Complex edited +
InteractionEvent edited +
Event edited +
CellLineagePath edited +
ReactionlikeEvent edited +
CandidateSet edited +
Reaction edited +
ChemicalDrug edited +
RNADrug edited +
ProteinDrug edited +
Drug edited +
Pathway edited +
CellDevelopmentStep edited +
Cell edited +
EntitySet edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
InteractionEvent internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
Event structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
CellLineagePath structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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