Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
_Deleted replacementInstances +
InteractionEvent structureModified +
Pathway structureModified +
FailedReaction structureModified +
Event structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
PsiMod modified +
LiteratureReference modified +
FunctionalStatusType modified +
ReplacedResidue modified +
ProteinDrug modified +
NonsenseMutation modified +
GenomeEncodedEntity modified +
_UpdateTracker modified +
ModifiedNucleotide modified +
FailedReaction modified +
BlackBoxEvent modified +
PathwayDiagram modified +
EntitySet modified +
GO_MolecularFunction modified +
DatabaseObject modified +
ReferenceSequence modified +
NegativeRegulation modified +
Species modified +
Taxon modified +
SequenceOntology modified +
Reaction modified +
Depolymerisation modified +
InterChainCrosslinkedResidue modified +
GeneticallyModifiedResidue modified +
Event modified +
MarkerReference modified +
ReferenceIsoform modified +
Publication modified +
RegulationReference modified +
ReferenceDatabase modified +
RNADrug modified +
EntityWithAccessionedSequence modified +
Compartment modified +
StableIdentifierHistory modified +
URL modified +
ReferenceGroup modified +
Drug modified +
Complex modified +
ExternalOntology modified +
DefinedSet modified +
IntraChainCrosslinkedResidue modified +
_DeletedInstance modified +
Cell modified +
TranscriptionalModification modified +
GO_CellularComponent modified +
PositiveGeneExpressionRegulation modified +
ReferenceGeneProduct modified +
Pathway modified +
PhysicalEntity modified +
FragmentModification modified +
Requirement modified +
DrugActionType modified +
NegativePrecedingEventReason modified +
ControlledVocabulary modified +
_Release modified +
Polymerisation modified +
SimpleEntity modified +
FunctionalStatus modified +
Regulation modified +
CellDevelopmentStep modified +
DatabaseIdentifier modified +
FragmentDeletionModification modified +
ReferenceTherapeutic modified +
ReferenceMolecule modified +
Summation modified +
ControlReference modified +
InteractionEvent modified +
AbstractModifiedResidue modified +
ModifiedResidue modified +
Book modified +
_Deleted modified +
ReactionType modified +
ReferenceRNASequence modified +
Anatomy modified +
FragmentInsertionModification modified +
CellLineagePath modified +
Figure modified +
ReactionlikeEvent modified +
EvidenceType modified +
FragmentReplacedModification modified +
PhysicalEntityCellType modified +
Disease modified +
CatalystActivityReference modified +
ChemicalDrug modified +
ReferenceDNASequence modified +
StableIdentifier modified +
DeletedControlledVocabulary modified +
GroupModifiedResidue modified +
ReferenceEntity modified +
ReviewStatus modified +
Affiliation modified +
Person modified +
Polymer modified +
GO_BiologicalProcess modified +
RetractionStatus modified +
StableIdentifierReleaseStatus modified +
InstanceEdit modified +
EntityFunctionalStatus modified +
NegativePrecedingEvent modified +
PositiveRegulation modified +
NegativeGeneExpressionRegulation modified +
CatalystActivity modified +
TranslationalModification modified +
CrosslinkedResidue modified +
OtherEntity modified +
CellType modified +
FrontPage modified +
CandidateSet modified +
CellDevelopmentStep reviewed +
ChemicalDrug reviewed +
SimpleEntity reviewed +
EntityWithAccessionedSequence reviewed +
ProteinDrug reviewed +
RNADrug reviewed +
Polymer reviewed +
InteractionEvent reviewed +
Drug reviewed +
GenomeEncodedEntity reviewed +
FailedReaction reviewed +
Complex reviewed +
DefinedSet reviewed +
EntitySet reviewed +
BlackBoxEvent reviewed +
ReactionlikeEvent reviewed +
Cell reviewed +
CellLineagePath reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
Polymerisation reviewed +
CandidateSet reviewed +
Event reviewed +
Depolymerisation reviewed +
Reaction reviewed +
GenomeEncodedEntity authored 1
Drug authored 1
Polymer authored 1
InteractionEvent authored +
DefinedSet authored 1
Complex authored 1
FailedReaction authored +
ChemicalDrug authored 1
SimpleEntity authored 1
CellDevelopmentStep authored +
RNADrug authored 1
ProteinDrug authored 1
EntityWithAccessionedSequence authored 1
Pathway authored +
OtherEntity authored 1
PhysicalEntity authored 1
Reaction authored +
Depolymerisation authored +
Polymerisation authored +
CandidateSet authored 1
Event authored +
EntitySet authored 1
BlackBoxEvent authored +
Cell authored 1
CellLineagePath authored +
ReactionlikeEvent authored +
FailedReaction revised +
DefinedSet revised +
Complex revised +
InteractionEvent revised +
Polymer revised +
Drug revised +
GenomeEncodedEntity revised +
ProteinDrug revised +
EntityWithAccessionedSequence revised +
RNADrug revised +
CellDevelopmentStep revised +
ChemicalDrug revised +
SimpleEntity revised +
Polymerisation revised +
CandidateSet revised +
Event revised +
Reaction revised +
Depolymerisation revised +
OtherEntity revised +
PhysicalEntity revised +
Pathway revised +
ReactionlikeEvent revised +
Cell revised +
CellLineagePath revised +
EntitySet revised +
BlackBoxEvent revised +
EntityWithAccessionedSequence edited +
ProteinDrug edited +
RNADrug edited +
CellDevelopmentStep edited +
SimpleEntity edited +
ChemicalDrug edited +
FailedReaction edited +
DefinedSet edited +
Complex edited +
Drug edited +
Polymer edited +
InteractionEvent edited +
GenomeEncodedEntity edited +
ReactionlikeEvent edited +
CellLineagePath edited +
Cell edited +
BlackBoxEvent edited +
EntitySet edited +
Polymerisation edited +
CandidateSet edited +
Event edited +
Depolymerisation edited +
Reaction edited +
PhysicalEntity edited +
OtherEntity edited +
Pathway edited +
OtherEntity created 1
CatalystActivity created 1
TranslationalModification created 1
CrosslinkedResidue created 1
FrontPage created 1
CandidateSet created 1
CellType created 1
NegativePrecedingEvent created 1
InstanceEdit created 1
EntityFunctionalStatus created 1
PositiveRegulation created 1
NegativeGeneExpressionRegulation created 1
Affiliation created 1
Person created 1
Polymer created 1
ReviewStatus created 1
GO_BiologicalProcess created 1
RetractionStatus created 1
StableIdentifierReleaseStatus created 1
StableIdentifier created 1
DeletedControlledVocabulary created 1
ReferenceDNASequence created 1
CatalystActivityReference created 1
ChemicalDrug created 1
GroupModifiedResidue created 1
ReferenceEntity created 1
PhysicalEntityCellType created 1
FragmentReplacedModification created 1
Disease created 1
Anatomy created 1
FragmentInsertionModification created 1
ReactionType created 1
ReferenceRNASequence created 1
ReactionlikeEvent created 1
EvidenceType created 1
Figure created 1
CellLineagePath created 1
ControlReference created 1
InteractionEvent created 1
ReferenceMolecule created 1
Summation created 1
Book created 1
_Deleted created 1
ModifiedResidue created 1
AbstractModifiedResidue created 1
CellDevelopmentStep created 1
SimpleEntity created 1
Regulation created 1
FunctionalStatus created 1
FragmentDeletionModification created 1
ReferenceTherapeutic created 1
DatabaseIdentifier created 1
PhysicalEntity created 1
FragmentModification created 1
ReferenceGeneProduct created 1
PositiveGeneExpressionRegulation created 1
Pathway created 1
NegativePrecedingEventReason created 1
ControlledVocabulary created 1
_Release created 1
Polymerisation created 1
Requirement created 1
DrugActionType created 1
IntraChainCrosslinkedResidue created 1
TranscriptionalModification created 1
GO_CellularComponent created 1
_DeletedInstance created 1
Cell created 1
Compartment created 1
URL created 1
StableIdentifierHistory created 1
ReferenceGroup created 1
Drug created 1
DefinedSet created 1
Complex created 1
ExternalOntology created 1
RegulationReference created 1
ReferenceIsoform created 1
Publication created 1
EntityWithAccessionedSequence created 1
ReferenceDatabase created 1
RNADrug created 1
Taxon created 1
Species created 1
InterChainCrosslinkedResidue created 1
GeneticallyModifiedResidue created 1
Event created 1
MarkerReference created 1
Reaction created 1
SequenceOntology created 1
Depolymerisation created 1
GO_MolecularFunction created 1
BlackBoxEvent created 1
PathwayDiagram created 1
EntitySet created 1
DatabaseObject created 1
ReferenceSequence created 1
NegativeRegulation created 1
GenomeEncodedEntity created 1
_UpdateTracker created 1
ModifiedNucleotide created 1
FailedReaction created 1
ReplacedResidue created 1
FunctionalStatusType created 1
PsiMod created 1
LiteratureReference created 1
ProteinDrug created 1
NonsenseMutation created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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