Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
NegativeGeneExpressionRegulation created 1
PositiveRegulation created 1
Figure created 1
EvidenceType created 1
RetractionStatus created 1
ChemicalDrug created 1
ModifiedNucleotide created 1
FailedReaction created 1
GO_CellularComponent created 1
DeletedControlledVocabulary created 1
EntityWithAccessionedSequence created 1
IntraChainCrosslinkedResidue created 1
Drug created 1
DatabaseIdentifier created 1
_Release created 1
ReactionType created 1
RegulationReference created 1
CellDevelopmentStep created 1
ReplacedResidue created 1
PhysicalEntityCellType created 1
TranslationalModification created 1
FragmentInsertionModification created 1
Disease created 1
BlackBoxEvent created 1
MarkerReference created 1
Polymer created 1
OtherEntity created 1
FragmentReplacedModification created 1
ReferenceRNASequence created 1
GO_BiologicalProcess created 1
GeneticallyModifiedResidue created 1
Event created 1
FrontPage created 1
CellLineagePath created 1
SequenceOntology created 1
PositiveGeneExpressionRegulation created 1
GroupModifiedResidue created 1
EntitySet created 1
PsiMod created 1
StableIdentifier created 1
FragmentDeletionModification created 1
AbstractModifiedResidue created 1
Complex created 1
NegativePrecedingEvent created 1
RNADrug created 1
ReferenceDatabase created 1
_Deleted created 1
GO_MolecularFunction created 1
Taxon created 1
ReferenceGroup created 1
ControlledVocabulary created 1
Anatomy created 1
Requirement created 1
FragmentModification created 1
FunctionalStatusType created 1
Regulation created 1
CrosslinkedResidue created 1
Person created 1
Pathway created 1
ReferenceGeneProduct created 1
ReferenceEntity created 1
Reaction created 1
Book created 1
Affiliation created 1
Species created 1
ModifiedResidue created 1
ProteinDrug created 1
PhysicalEntity created 1
ControlReference created 1
InteractionEvent created 1
ReviewStatus created 1
ReferenceDNASequence created 1
DefinedSet created 1
NonsenseMutation created 1
_UpdateTracker created 1
DatabaseObject created 1
Cell created 1
StableIdentifierReleaseStatus created 1
EntityFunctionalStatus created 1
NegativeRegulation created 1
URL created 1
InterChainCrosslinkedResidue created 1
ReferenceSequence created 1
ExternalOntology created 1
ReferenceMolecule created 1
_DeletedInstance created 1
ReferenceTherapeutic created 1
ReactionlikeEvent created 1
Summation created 1
NegativePrecedingEventReason created 1
CatalystActivityReference created 1
LiteratureReference created 1
TranscriptionalModification created 1
Polymerisation created 1
InstanceEdit created 1
Depolymerisation created 1
Compartment created 1
SimpleEntity created 1
CellType created 1
Publication created 1
FunctionalStatus created 1
ReferenceIsoform created 1
CatalystActivity created 1
PathwayDiagram created 1
CandidateSet created 1
DrugActionType created 1
GenomeEncodedEntity created 1
StableIdentifierHistory created 1
Pathway structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Event structureModified +
Reaction structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
OtherEntity revised +
FailedReaction revised +
ChemicalDrug revised +
Pathway revised +
Event revised +
EntityWithAccessionedSequence revised +
Reaction revised +
CellLineagePath revised +
Drug revised +
ReactionlikeEvent revised +
CellDevelopmentStep revised +
Polymerisation revised +
EntitySet revised +
ProteinDrug revised +
RNADrug revised +
SimpleEntity revised +
Complex revised +
Depolymerisation revised +
CandidateSet revised +
InteractionEvent revised +
BlackBoxEvent revised +
PhysicalEntity revised +
Polymer revised +
Cell revised +
GenomeEncodedEntity revised +
DefinedSet revised +
ProteinDrug edited +
RNADrug edited +
SimpleEntity edited +
Complex edited +
Depolymerisation edited +
CellDevelopmentStep edited +
Polymerisation edited +
EntitySet edited +
Cell edited +
Polymer edited +
GenomeEncodedEntity edited +
DefinedSet edited +
CandidateSet edited +
BlackBoxEvent edited +
InteractionEvent edited +
PhysicalEntity edited +
FailedReaction edited +
ChemicalDrug edited +
OtherEntity edited +
Reaction edited +
CellLineagePath edited +
Drug edited +
ReactionlikeEvent edited +
Pathway edited +
Event edited +
EntityWithAccessionedSequence edited +
Anatomy modified +
FragmentModification modified +
FunctionalStatusType modified +
Requirement modified +
CrosslinkedResidue modified +
Regulation modified +
Person modified +
Pathway modified +
ReferenceEntity modified +
ReferenceGeneProduct modified +
Reaction modified +
Book modified +
ModifiedResidue modified +
Affiliation modified +
Species modified +
ProteinDrug modified +
ControlReference modified +
PhysicalEntity modified +
ReviewStatus modified +
InteractionEvent modified +
NonsenseMutation modified +
_UpdateTracker modified +
ReferenceDNASequence modified +
DefinedSet modified +
Cell modified +
DatabaseObject modified +
StableIdentifierReleaseStatus modified +
URL modified +
NegativeRegulation modified +
EntityFunctionalStatus modified +
ExternalOntology modified +
ReferenceMolecule modified +
ReferenceSequence modified +
InterChainCrosslinkedResidue modified +
_DeletedInstance modified +
ReferenceTherapeutic modified +
Summation modified +
ReactionlikeEvent modified +
CatalystActivityReference modified +
NegativePrecedingEventReason modified +
LiteratureReference modified +
Polymerisation modified +
TranscriptionalModification modified +
InstanceEdit modified +
Compartment modified +
Depolymerisation modified +
CellType modified +
SimpleEntity modified +
FunctionalStatus modified +
Publication modified +
CandidateSet modified +
PathwayDiagram modified +
CatalystActivity modified +
ReferenceIsoform modified +
DrugActionType modified +
StableIdentifierHistory modified +
GenomeEncodedEntity modified +
PositiveRegulation modified +
Figure modified +
NegativeGeneExpressionRegulation modified +
EvidenceType modified +
RetractionStatus modified +
ChemicalDrug modified +
FailedReaction modified +
ModifiedNucleotide modified +
GO_CellularComponent modified +
DeletedControlledVocabulary modified +
IntraChainCrosslinkedResidue modified +
EntityWithAccessionedSequence modified +
Drug modified +
DatabaseIdentifier modified +
_Release modified +
ReactionType modified +
CellDevelopmentStep modified +
RegulationReference modified +
ReplacedResidue modified +
PhysicalEntityCellType modified +
FragmentInsertionModification modified +
TranslationalModification modified +
MarkerReference modified +
BlackBoxEvent modified +
Disease modified +
Polymer modified +
OtherEntity modified +
FragmentReplacedModification modified +
GO_BiologicalProcess modified +
ReferenceRNASequence modified +
Event modified +
GeneticallyModifiedResidue modified +
FrontPage modified +
CellLineagePath modified +
EntitySet modified +
PsiMod modified +
GroupModifiedResidue modified +
PositiveGeneExpressionRegulation modified +
SequenceOntology modified +
FragmentDeletionModification modified +
StableIdentifier modified +
Complex modified +
AbstractModifiedResidue modified +
RNADrug modified +
NegativePrecedingEvent modified +
ReferenceGroup modified +
ReferenceDatabase modified +
GO_MolecularFunction modified +
_Deleted modified +
Taxon modified +
ControlledVocabulary modified +
GenomeEncodedEntity reviewed +
Cell reviewed +
Polymer reviewed +
DefinedSet reviewed +
BlackBoxEvent reviewed +
InteractionEvent reviewed +
CandidateSet reviewed +
PhysicalEntity reviewed +
SimpleEntity reviewed +
RNADrug reviewed +
ProteinDrug reviewed +
Depolymerisation reviewed +
Complex reviewed +
Polymerisation reviewed +
CellDevelopmentStep reviewed +
EntitySet reviewed +
Reaction reviewed +
ReactionlikeEvent reviewed +
Drug reviewed +
CellLineagePath reviewed +
Pathway reviewed +
Event reviewed +
EntityWithAccessionedSequence reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
OtherEntity reviewed +
Complex authored 1
Depolymerisation authored +
RNADrug authored 1
ProteinDrug authored 1
SimpleEntity authored 1
EntitySet authored 1
Polymerisation authored +
CellDevelopmentStep authored +
DefinedSet authored 1
Cell authored 1
Polymer authored 1
GenomeEncodedEntity authored 1
PhysicalEntity authored 1
CandidateSet authored 1
InteractionEvent authored +
BlackBoxEvent authored +
ChemicalDrug authored 1
FailedReaction authored +
OtherEntity authored 1
CellLineagePath authored +
Drug authored 1
ReactionlikeEvent authored +
Reaction authored +
Pathway authored +
Event authored +
EntityWithAccessionedSequence authored 1
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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