Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
MarkerReference modified +
FunctionalStatus modified +
GroupModifiedResidue modified +
Disease modified +
SequenceOntology modified +
FailedReaction modified +
ReviewStatus modified +
Polymerisation modified +
CatalystActivity modified +
Publication modified +
Complex modified +
Species modified +
DatabaseIdentifier modified +
PositiveGeneExpressionRegulation modified +
_DeletedInstance modified +
Requirement modified +
Cell modified +
Anatomy modified +
PhysicalEntityCellType modified +
FragmentDeletionModification modified +
Pathway modified +
FragmentModification modified +
Drug modified +
StableIdentifier modified +
EntitySet modified +
PositiveRegulation modified +
ReactionType modified +
InterChainCrosslinkedResidue modified +
BlackBoxEvent modified +
FragmentInsertionModification modified +
LiteratureReference modified +
ReferenceSequence modified +
EntityFunctionalStatus modified +
ReferenceMolecule modified +
DeletedControlledVocabulary modified +
SimpleEntity modified +
IntraChainCrosslinkedResidue modified +
CellLineagePath modified +
_Release modified +
EntityWithAccessionedSequence modified +
Reaction modified +
RNADrug modified +
FrontPage modified +
Figure modified +
PhysicalEntity modified +
ReferenceDatabase modified +
TranscriptionalModification modified +
TranslationalModification modified +
DatabaseObject modified +
NegativeRegulation modified +
Book modified +
ModifiedNucleotide modified +
ControlledVocabulary modified +
DefinedSet modified +
Summation modified +
GenomeEncodedEntity modified +
ModifiedResidue modified +
ReferenceGeneProduct modified +
Depolymerisation modified +
NonsenseMutation modified +
ReferenceEntity modified +
EvidenceType modified +
CatalystActivityReference modified +
ReactionlikeEvent modified +
GO_MolecularFunction modified +
ReplacedResidue modified +
DrugActionType modified +
_Deleted modified +
CrosslinkedResidue modified +
PsiMod modified +
StableIdentifierHistory modified +
FunctionalStatusType modified +
ReferenceRNASequence modified +
URL modified +
RegulationReference modified +
ReferenceIsoform modified +
Taxon modified +
AbstractModifiedResidue modified +
Regulation modified +
NegativeGeneExpressionRegulation modified +
Event modified +
OtherEntity modified +
CellType modified +
Affiliation modified +
StableIdentifierReleaseStatus modified +
ChemicalDrug modified +
ReferenceDNASequence modified +
ProteinDrug modified +
FragmentReplacedModification modified +
ReferenceGroup modified +
RetractionStatus modified +
ReferenceTherapeutic modified +
Person modified +
GO_BiologicalProcess modified +
NegativePrecedingEvent modified +
CandidateSet modified +
InteractionEvent modified +
NegativePrecedingEventReason modified +
ControlReference modified +
CellDevelopmentStep modified +
_UpdateTracker modified +
GeneticallyModifiedResidue modified +
InstanceEdit modified +
ExternalOntology modified +
GO_CellularComponent modified +
PathwayDiagram modified +
Compartment modified +
Polymer modified +
Pathway internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
CellLineagePath edited +
SimpleEntity edited +
ReactionlikeEvent edited +
ProteinDrug edited +
CandidateSet edited +
RNADrug edited +
Reaction edited +
Polymerisation edited +
EntityWithAccessionedSequence edited +
Complex edited +
FailedReaction edited +
Drug edited +
Pathway edited +
EntitySet edited +
CellDevelopmentStep edited +
InteractionEvent edited +
Cell edited +
PhysicalEntity edited +
Depolymerisation edited +
BlackBoxEvent edited +
ChemicalDrug edited +
GenomeEncodedEntity edited +
Polymer edited +
DefinedSet edited +
Event edited +
OtherEntity edited +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
Event structureModified +
Reaction structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
InteractionEvent reviewed +
Cell reviewed +
PhysicalEntity reviewed +
Drug reviewed +
Pathway reviewed +
EntitySet reviewed +
CellDevelopmentStep reviewed +
DefinedSet reviewed +
Event reviewed +
OtherEntity reviewed +
Depolymerisation reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
ProteinDrug reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
ReactionlikeEvent reviewed +
Polymerisation reviewed +
Reaction reviewed +
EntityWithAccessionedSequence reviewed +
Complex reviewed +
FailedReaction reviewed +
CandidateSet reviewed +
RNADrug reviewed +
PhysicalEntity authored 1
Cell authored 1
InteractionEvent authored +
CellDevelopmentStep authored +
Drug authored 1
Pathway authored +
EntitySet authored 1
Event authored +
OtherEntity authored 1
DefinedSet authored 1
ChemicalDrug authored 1
BlackBoxEvent authored +
GenomeEncodedEntity authored 1
Polymer authored 1
Depolymerisation authored +
ProteinDrug authored 1
ReactionlikeEvent authored +
SimpleEntity authored 1
CellLineagePath authored +
FailedReaction authored +
Reaction authored +
Polymerisation authored +
EntityWithAccessionedSequence authored 1
Complex authored 1
RNADrug authored 1
CandidateSet authored 1
Cell revised +
InteractionEvent revised +
PhysicalEntity revised +
Pathway revised +
Drug revised +
EntitySet revised +
CellDevelopmentStep revised +
DefinedSet revised +
Event revised +
OtherEntity revised +
Depolymerisation revised +
ChemicalDrug revised +
BlackBoxEvent revised +
Polymer revised +
GenomeEncodedEntity revised +
ProteinDrug revised +
CellLineagePath revised +
SimpleEntity revised +
ReactionlikeEvent revised +
Reaction revised +
EntityWithAccessionedSequence revised +
Polymerisation revised +
Complex revised +
FailedReaction revised +
CandidateSet revised +
RNADrug revised +
StableIdentifier created 1
EntitySet created 1
Pathway created 1
PhysicalEntityCellType created 1
FragmentModification created 1
FragmentDeletionModification created 1
Drug created 1
Anatomy created 1
Requirement created 1
Cell created 1
_DeletedInstance created 1
BlackBoxEvent created 1
InterChainCrosslinkedResidue created 1
ReactionType created 1
PositiveRegulation created 1
SequenceOntology created 1
Disease created 1
GroupModifiedResidue created 1
FunctionalStatus created 1
MarkerReference created 1
PositiveGeneExpressionRegulation created 1
DatabaseIdentifier created 1
Species created 1
Complex created 1
Polymerisation created 1
Publication created 1
CatalystActivity created 1
ReviewStatus created 1
FailedReaction created 1
NegativeRegulation created 1
DatabaseObject created 1
TranslationalModification created 1
TranscriptionalModification created 1
ReferenceDatabase created 1
PhysicalEntity created 1
Depolymerisation created 1
GenomeEncodedEntity created 1
ReferenceGeneProduct created 1
ModifiedResidue created 1
DefinedSet created 1
ControlledVocabulary created 1
Summation created 1
ModifiedNucleotide created 1
Book created 1
_Release created 1
IntraChainCrosslinkedResidue created 1
CellLineagePath created 1
DeletedControlledVocabulary created 1
SimpleEntity created 1
ReferenceMolecule created 1
EntityFunctionalStatus created 1
ReferenceSequence created 1
LiteratureReference created 1
FragmentInsertionModification created 1
Figure created 1
FrontPage created 1
RNADrug created 1
Reaction created 1
EntityWithAccessionedSequence created 1
AbstractModifiedResidue created 1
Regulation created 1
Taxon created 1
ReferenceIsoform created 1
RegulationReference created 1
URL created 1
ChemicalDrug created 1
StableIdentifierReleaseStatus created 1
Affiliation created 1
OtherEntity created 1
CellType created 1
Event created 1
NegativeGeneExpressionRegulation created 1
ReplacedResidue created 1
GO_MolecularFunction created 1
ReactionlikeEvent created 1
CatalystActivityReference created 1
EvidenceType created 1
ReferenceEntity created 1
NonsenseMutation created 1
FunctionalStatusType created 1
ReferenceRNASequence created 1
StableIdentifierHistory created 1
PsiMod created 1
_Deleted created 1
CrosslinkedResidue created 1
DrugActionType created 1
GeneticallyModifiedResidue created 1
InstanceEdit created 1
_UpdateTracker created 1
CellDevelopmentStep created 1
ControlReference created 1
InteractionEvent created 1
NegativePrecedingEventReason created 1
Polymer created 1
Compartment created 1
PathwayDiagram created 1
GO_CellularComponent created 1
ExternalOntology created 1
RetractionStatus created 1
ReferenceGroup created 1
FragmentReplacedModification created 1
ProteinDrug created 1
ReferenceDNASequence created 1
CandidateSet created 1
NegativePrecedingEvent created 1
GO_BiologicalProcess created 1
Person created 1
ReferenceTherapeutic created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

Follow Reactome