Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Pathway internalReviewed +
CellLineagePath internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
ReactionlikeEvent internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
InteractionEvent structureModified +
Event structureModified +
CellLineagePath structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
RegulationReference modified +
ProteinDrug modified +
FunctionalStatus modified +
EntitySet modified +
SimpleEntity modified +
Depolymerisation modified +
FragmentDeletionModification modified +
GenomeEncodedEntity modified +
EntityWithAccessionedSequence modified +
InteractionEvent modified +
ReferenceMolecule modified +
CatalystActivity modified +
IntraChainCrosslinkedResidue modified +
CellLineagePath modified +
Person modified +
GeneticallyModifiedResidue modified +
PsiMod modified +
StableIdentifierReleaseStatus modified +
ReferenceTherapeutic modified +
CandidateSet modified +
Disease modified +
GroupModifiedResidue modified +
FrontPage modified +
DefinedSet modified +
NegativePrecedingEvent modified +
ReferenceDatabase modified +
ReactionlikeEvent modified +
_UpdateTracker modified +
AbstractModifiedResidue modified +
StableIdentifierHistory modified +
Summation modified +
ReplacedResidue modified +
ReferenceGroup modified +
Regulation modified +
ReferenceGeneProduct modified +
Anatomy modified +
Publication modified +
ReferenceRNASequence modified +
ChemicalDrug modified +
_Release modified +
RetractionStatus modified +
BlackBoxEvent modified +
Polymer modified +
GO_CellularComponent modified +
LiteratureReference modified +
TranscriptionalModification modified +
ReferenceSequence modified +
FunctionalStatusType modified +
Event modified +
ExternalOntology modified +
ReferenceDNASequence modified +
Taxon modified +
PhysicalEntityCellType modified +
DatabaseIdentifier modified +
EvidenceType modified +
ReferenceIsoform modified +
FragmentInsertionModification modified +
SequenceOntology modified +
GO_BiologicalProcess modified +
Affiliation modified +
InterChainCrosslinkedResidue modified +
Polymerisation modified +
OtherEntity modified +
NegativePrecedingEventReason modified +
CellDevelopmentStep modified +
Species modified +
RNADrug modified +
Cell modified +
FragmentModification modified +
Pathway modified +
ReferenceEntity modified +
Drug modified +
EntityFunctionalStatus modified +
ModifiedResidue modified +
FragmentReplacedModification modified +
TranslationalModification modified +
ReactionType modified +
Compartment modified +
NonsenseMutation modified +
DeletedControlledVocabulary modified +
Figure modified +
Requirement modified +
ControlledVocabulary modified +
_DeletedInstance modified +
DrugActionType modified +
Book modified +
CrosslinkedResidue modified +
ReviewStatus modified +
InstanceEdit modified +
URL modified +
StableIdentifier modified +
PathwayDiagram modified +
Complex modified +
NegativeGeneExpressionRegulation modified +
FailedReaction modified +
ControlReference modified +
DatabaseObject modified +
PositiveRegulation modified +
PhysicalEntity modified +
_Deleted modified +
CellType modified +
NegativeRegulation modified +
CatalystActivityReference modified +
PositiveGeneExpressionRegulation modified +
MarkerReference modified +
GO_MolecularFunction modified +
Reaction modified +
ModifiedNucleotide modified +
OtherEntity authored 1
Polymerisation authored +
GenomeEncodedEntity authored 1
EntityWithAccessionedSequence authored 1
CellDevelopmentStep authored +
RNADrug authored 1
InteractionEvent authored +
ProteinDrug authored 1
DefinedSet authored 1
ReactionlikeEvent authored +
EntitySet authored 1
SimpleEntity authored 1
Depolymerisation authored +
PhysicalEntity authored 1
Reaction authored +
CandidateSet authored 1
Event authored +
ChemicalDrug authored 1
CellLineagePath authored +
Pathway authored +
Cell authored 1
FailedReaction authored +
Complex authored 1
Polymer authored 1
BlackBoxEvent authored +
Drug authored 1
Reaction reviewed +
CandidateSet reviewed +
Event reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
Complex reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
Drug reviewed +
CellLineagePath reviewed +
ChemicalDrug reviewed +
Pathway reviewed +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
CellDevelopmentStep reviewed +
RNADrug reviewed +
InteractionEvent reviewed +
Polymerisation reviewed +
OtherEntity reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
EntitySet reviewed +
SimpleEntity reviewed +
Depolymerisation reviewed +
ProteinDrug reviewed +
DefinedSet reviewed +
InteractionEvent edited +
RNADrug edited +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
GenomeEncodedEntity edited +
Polymerisation edited +
OtherEntity edited +
SimpleEntity edited +
Depolymerisation edited +
ReactionlikeEvent edited +
EntitySet edited +
DefinedSet edited +
ProteinDrug edited +
CandidateSet edited +
Event edited +
Reaction edited +
PhysicalEntity edited +
Drug edited +
BlackBoxEvent edited +
Complex edited +
Polymer edited +
FailedReaction edited +
Cell edited +
Pathway edited +
CellLineagePath edited +
ChemicalDrug edited +
LiteratureReference created 1
BlackBoxEvent created 1
Polymer created 1
GO_CellularComponent created 1
RetractionStatus created 1
ChemicalDrug created 1
_Release created 1
Event created 1
FunctionalStatusType created 1
ReferenceSequence created 1
TranscriptionalModification created 1
AbstractModifiedResidue created 1
ReactionlikeEvent created 1
ReferenceDatabase created 1
_UpdateTracker created 1
DefinedSet created 1
NegativePrecedingEvent created 1
GroupModifiedResidue created 1
Disease created 1
FrontPage created 1
Regulation created 1
Publication created 1
Anatomy created 1
ReferenceRNASequence created 1
ReferenceGeneProduct created 1
ReplacedResidue created 1
Summation created 1
ReferenceGroup created 1
StableIdentifierHistory created 1
Person created 1
CellLineagePath created 1
CandidateSet created 1
ReferenceTherapeutic created 1
PsiMod created 1
StableIdentifierReleaseStatus created 1
GeneticallyModifiedResidue created 1
Depolymerisation created 1
SimpleEntity created 1
EntitySet created 1
FunctionalStatus created 1
RegulationReference created 1
ProteinDrug created 1
InteractionEvent created 1
ReferenceMolecule created 1
CatalystActivity created 1
IntraChainCrosslinkedResidue created 1
EntityWithAccessionedSequence created 1
GenomeEncodedEntity created 1
FragmentDeletionModification created 1
ControlReference created 1
DatabaseObject created 1
PositiveRegulation created 1
Complex created 1
NegativeGeneExpressionRegulation created 1
FailedReaction created 1
StableIdentifier created 1
URL created 1
PathwayDiagram created 1
ReviewStatus created 1
InstanceEdit created 1
ModifiedNucleotide created 1
GO_MolecularFunction created 1
Reaction created 1
NegativeRegulation created 1
CatalystActivityReference created 1
PositiveGeneExpressionRegulation created 1
MarkerReference created 1
_Deleted created 1
PhysicalEntity created 1
CellType created 1
DrugActionType created 1
Book created 1
_DeletedInstance created 1
ControlledVocabulary created 1
Requirement created 1
Figure created 1
CrosslinkedResidue created 1
Drug created 1
ReferenceEntity created 1
Cell created 1
Pathway created 1
FragmentModification created 1
ReactionType created 1
Compartment created 1
DeletedControlledVocabulary created 1
NonsenseMutation created 1
FragmentReplacedModification created 1
TranslationalModification created 1
EntityFunctionalStatus created 1
ModifiedResidue created 1
SequenceOntology created 1
Affiliation created 1
InterChainCrosslinkedResidue created 1
GO_BiologicalProcess created 1
FragmentInsertionModification created 1
Taxon created 1
PhysicalEntityCellType created 1
DatabaseIdentifier created 1
EvidenceType created 1
ReferenceIsoform created 1
ReferenceDNASequence created 1
ExternalOntology created 1
RNADrug created 1
Species created 1
CellDevelopmentStep created 1
NegativePrecedingEventReason created 1
OtherEntity created 1
Polymerisation created 1
ProteinDrug revised +
DefinedSet revised +
ReactionlikeEvent revised +
EntitySet revised +
SimpleEntity revised +
Depolymerisation revised +
OtherEntity revised +
Polymerisation revised +
GenomeEncodedEntity revised +
EntityWithAccessionedSequence revised +
CellDevelopmentStep revised +
RNADrug revised +
InteractionEvent revised +
CellLineagePath revised +
ChemicalDrug revised +
Pathway revised +
Cell revised +
FailedReaction revised +
BlackBoxEvent revised +
Complex revised +
Polymer revised +
Drug revised +
PhysicalEntity revised +
Reaction revised +
CandidateSet revised +
Event revised +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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