Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
Reaction revised +
Event revised +
CellLineagePath revised +
GenomeEncodedEntity revised +
ProteinDrug revised +
RNADrug revised +
Depolymerisation revised +
Complex revised +
OtherEntity revised +
ChemicalDrug revised +
ReactionlikeEvent revised +
EntityWithAccessionedSequence revised +
PhysicalEntity revised +
Cell revised +
DefinedSet revised +
FailedReaction revised +
CandidateSet revised +
Polymerisation revised +
Drug revised +
EntitySet revised +
Pathway revised +
SimpleEntity revised +
BlackBoxEvent revised +
Polymer revised +
CellDevelopmentStep revised +
InteractionEvent revised +
ControlReference modified +
_UpdateTracker modified +
Disease modified +
OtherEntity modified +
DatabaseIdentifier modified +
Regulation modified +
GenomeEncodedEntity modified +
ProteinDrug modified +
Anatomy modified +
GO_BiologicalProcess modified +
DrugActionType modified +
ExternalOntology modified +
ModifiedNucleotide modified +
NegativePrecedingEventReason modified +
GO_MolecularFunction modified +
FragmentDeletionModification modified +
ReferenceDNASequence modified +
CatalystActivityReference modified +
Polymerisation modified +
Cell modified +
DefinedSet modified +
ReferenceIsoform modified +
Complex modified +
TranslationalModification modified +
Book modified +
Event modified +
_Deleted modified +
URL modified +
ReactionType modified +
ReferenceTherapeutic modified +
Figure modified +
LiteratureReference modified +
InteractionEvent modified +
ReviewStatus modified +
FragmentModification modified +
RegulationReference modified +
SequenceOntology modified +
StableIdentifier modified +
Pathway modified +
EvidenceType modified +
FunctionalStatusType modified +
FrontPage modified +
CandidateSet modified +
GroupModifiedResidue modified +
ReferenceEntity modified +
FailedReaction modified +
GO_CellularComponent modified +
PsiMod modified +
PhysicalEntity modified +
EntityWithAccessionedSequence modified +
EntityFunctionalStatus modified +
ReplacedResidue modified +
FunctionalStatus modified +
NegativeGeneExpressionRegulation modified +
Depolymerisation modified +
InstanceEdit modified +
NegativePrecedingEvent modified +
GeneticallyModifiedResidue modified +
FragmentReplacedModification modified +
ReferenceSequence modified +
ReferenceGroup modified +
PathwayDiagram modified +
Species modified +
ModifiedResidue modified +
_Release modified +
FragmentInsertionModification modified +
Reaction modified +
Polymer modified +
AbstractModifiedResidue modified +
ControlledVocabulary modified +
SimpleEntity modified +
PositiveRegulation modified +
EntitySet modified +
NonsenseMutation modified +
ReferenceMolecule modified +
ReferenceRNASequence modified +
Requirement modified +
Taxon modified +
ReferenceGeneProduct modified +
CrosslinkedResidue modified +
InterChainCrosslinkedResidue modified +
Compartment modified +
ChemicalDrug modified +
ReactionlikeEvent modified +
IntraChainCrosslinkedResidue modified +
Person modified +
PositiveGeneExpressionRegulation modified +
CellType modified +
RNADrug modified +
Publication modified +
MarkerReference modified +
DeletedControlledVocabulary modified +
CellLineagePath modified +
PhysicalEntityCellType modified +
StableIdentifierReleaseStatus modified +
ReferenceDatabase modified +
BlackBoxEvent modified +
CellDevelopmentStep modified +
RetractionStatus modified +
_DeletedInstance modified +
Summation modified +
NegativeRegulation modified +
Drug modified +
StableIdentifierHistory modified +
Affiliation modified +
CatalystActivity modified +
TranscriptionalModification modified +
DatabaseObject modified +
Drug authored 1
DefinedSet authored 1
Cell authored 1
FailedReaction authored +
CandidateSet authored 1
Polymerisation authored +
Polymer authored 1
CellDevelopmentStep authored +
BlackBoxEvent authored +
InteractionEvent authored +
EntitySet authored 1
Pathway authored +
SimpleEntity authored 1
ProteinDrug authored 1
GenomeEncodedEntity authored 1
Reaction authored +
Event authored +
CellLineagePath authored +
OtherEntity authored 1
ChemicalDrug authored 1
ReactionlikeEvent authored +
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
RNADrug authored 1
Complex authored 1
Depolymerisation authored +
CellLineagePath edited +
Event edited +
Reaction edited +
GenomeEncodedEntity edited +
ProteinDrug edited +
Depolymerisation edited +
Complex edited +
RNADrug edited +
ReactionlikeEvent edited +
EntityWithAccessionedSequence edited +
PhysicalEntity edited +
ChemicalDrug edited +
OtherEntity edited +
Polymerisation edited +
CandidateSet edited +
FailedReaction edited +
Cell edited +
DefinedSet edited +
Drug edited +
SimpleEntity edited +
Pathway edited +
EntitySet edited +
InteractionEvent edited +
Polymer edited +
CellDevelopmentStep edited +
BlackBoxEvent edited +
Publication created 1
PhysicalEntityCellType created 1
StableIdentifierReleaseStatus created 1
CellLineagePath created 1
DeletedControlledVocabulary created 1
MarkerReference created 1
Person created 1
IntraChainCrosslinkedResidue created 1
ReactionlikeEvent created 1
ChemicalDrug created 1
CellType created 1
RNADrug created 1
PositiveGeneExpressionRegulation created 1
StableIdentifierHistory created 1
Drug created 1
NegativeRegulation created 1
DatabaseObject created 1
CatalystActivity created 1
TranscriptionalModification created 1
Affiliation created 1
_DeletedInstance created 1
ReferenceDatabase created 1
BlackBoxEvent created 1
CellDevelopmentStep created 1
RetractionStatus created 1
Summation created 1
Species created 1
PathwayDiagram created 1
ReferenceGroup created 1
ReferenceSequence created 1
FragmentReplacedModification created 1
Reaction created 1
FragmentInsertionModification created 1
_Release created 1
ModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
FunctionalStatus created 1
ReplacedResidue created 1
EntityFunctionalStatus created 1
PhysicalEntity created 1
EntityWithAccessionedSequence created 1
PsiMod created 1
GeneticallyModifiedResidue created 1
NegativePrecedingEvent created 1
InstanceEdit created 1
Depolymerisation created 1
Requirement created 1
ReferenceRNASequence created 1
InterChainCrosslinkedResidue created 1
Compartment created 1
CrosslinkedResidue created 1
ReferenceGeneProduct created 1
Taxon created 1
ControlledVocabulary created 1
Polymer created 1
AbstractModifiedResidue created 1
ReferenceMolecule created 1
NonsenseMutation created 1
EntitySet created 1
SimpleEntity created 1
PositiveRegulation created 1
Book created 1
Figure created 1
ReferenceTherapeutic created 1
Event created 1
_Deleted created 1
URL created 1
ReactionType created 1
ReferenceIsoform created 1
TranslationalModification created 1
Complex created 1
FunctionalStatusType created 1
EvidenceType created 1
FailedReaction created 1
GO_CellularComponent created 1
ReferenceEntity created 1
GroupModifiedResidue created 1
FrontPage created 1
CandidateSet created 1
RegulationReference created 1
InteractionEvent created 1
FragmentModification created 1
ReviewStatus created 1
LiteratureReference created 1
Pathway created 1
StableIdentifier created 1
SequenceOntology created 1
Anatomy created 1
ProteinDrug created 1
GenomeEncodedEntity created 1
Regulation created 1
GO_BiologicalProcess created 1
Disease created 1
OtherEntity created 1
_UpdateTracker created 1
ControlReference created 1
DatabaseIdentifier created 1
FragmentDeletionModification created 1
DefinedSet created 1
Cell created 1
Polymerisation created 1
CatalystActivityReference created 1
ReferenceDNASequence created 1
ModifiedNucleotide created 1
ExternalOntology created 1
DrugActionType created 1
GO_MolecularFunction created 1
NegativePrecedingEventReason created 1
Depolymerisation structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
Event structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
Reaction structureModified +
FailedReaction structureModified +
CellLineagePath internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Drug reviewed +
Polymerisation reviewed +
CandidateSet reviewed +
FailedReaction reviewed +
DefinedSet reviewed +
Cell reviewed +
InteractionEvent reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
SimpleEntity reviewed +
Pathway reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
GenomeEncodedEntity reviewed +
CellLineagePath reviewed +
Event reviewed +
Reaction reviewed +
PhysicalEntity reviewed +
ReactionlikeEvent reviewed +
EntityWithAccessionedSequence reviewed +
ChemicalDrug reviewed +
OtherEntity reviewed +
Complex reviewed +
Depolymerisation reviewed +
RNADrug reviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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