Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Pathway edited +
CellDevelopmentStep edited +
ProteinDrug edited +
Depolymerisation edited +
InteractionEvent edited +
RNADrug edited +
ChemicalDrug edited +
BlackBoxEvent edited +
ReactionlikeEvent edited +
Cell edited +
CellLineagePath edited +
Polymerisation edited +
CandidateSet edited +
PhysicalEntity edited +
Drug edited +
FailedReaction edited +
Polymer edited +
Complex edited +
EntitySet edited +
Reaction edited +
OtherEntity edited +
DefinedSet edited +
SimpleEntity edited +
EntityWithAccessionedSequence edited +
Event edited +
GenomeEncodedEntity edited +
_Deleted replacementInstances +
Polymerisation revised +
CandidateSet revised +
Cell revised +
CellLineagePath revised +
ReactionlikeEvent revised +
BlackBoxEvent revised +
ChemicalDrug revised +
RNADrug revised +
InteractionEvent revised +
Depolymerisation revised +
CellDevelopmentStep revised +
ProteinDrug revised +
Pathway revised +
GenomeEncodedEntity revised +
Event revised +
EntityWithAccessionedSequence revised +
OtherEntity revised +
DefinedSet revised +
SimpleEntity revised +
Reaction revised +
EntitySet revised +
Complex revised +
Polymer revised +
FailedReaction revised +
Drug revised +
PhysicalEntity revised +
Cell authored 1
CellLineagePath authored +
ReactionlikeEvent authored +
Polymerisation authored +
CandidateSet authored 1
ChemicalDrug authored 1
BlackBoxEvent authored +
InteractionEvent authored +
RNADrug authored 1
Depolymerisation authored +
ProteinDrug authored 1
CellDevelopmentStep authored +
Pathway authored +
GenomeEncodedEntity authored 1
Event authored +
EntityWithAccessionedSequence authored 1
DefinedSet authored 1
OtherEntity authored 1
SimpleEntity authored 1
EntitySet authored 1
Reaction authored +
Complex authored 1
Drug authored 1
Polymer authored 1
FailedReaction authored +
PhysicalEntity authored 1
_UpdateTracker modified +
ReactionType modified +
ControlReference modified +
EntityWithAccessionedSequence modified +
StableIdentifier modified +
ReferenceGeneProduct modified +
_Release modified +
OtherEntity modified +
SimpleEntity modified +
InstanceEdit modified +
CatalystActivity modified +
PositiveGeneExpressionRegulation modified +
DeletedControlledVocabulary modified +
Polymer modified +
FrontPage modified +
Drug modified +
_Deleted modified +
ModifiedResidue modified +
DatabaseObject modified +
PositiveRegulation modified +
RegulationReference modified +
ChemicalDrug modified +
BlackBoxEvent modified +
ControlledVocabulary modified +
CatalystActivityReference modified +
StableIdentifierHistory modified +
MarkerReference modified +
Disease modified +
Figure modified +
PathwayDiagram modified +
PsiMod modified +
Summation modified +
Affiliation modified +
Reaction modified +
EntitySet modified +
ReferenceDNASequence modified +
ExternalOntology modified +
SequenceOntology modified +
Complex modified +
CellType modified +
ReviewStatus modified +
PhysicalEntity modified +
FragmentDeletionModification modified +
ReactionlikeEvent modified +
Anatomy modified +
InteractionEvent modified +
FragmentInsertionModification modified +
CrosslinkedResidue modified +
CellDevelopmentStep modified +
Requirement modified +
FunctionalStatusType modified +
InterChainCrosslinkedResidue modified +
NegativeRegulation modified +
RetractionStatus modified +
ReferenceSequence modified +
Event modified +
Book modified +
NegativePrecedingEvent modified +
Person modified +
FailedReaction modified +
Compartment modified +
FragmentModification modified +
AbstractModifiedResidue modified +
NonsenseMutation modified +
_DeletedInstance modified +
IntraChainCrosslinkedResidue modified +
TranslationalModification modified +
CandidateSet modified +
Cell modified +
TranscriptionalModification modified +
PhysicalEntityCellType modified +
GeneticallyModifiedResidue modified +
URL modified +
Depolymerisation modified +
ReferenceTherapeutic modified +
ReferenceEntity modified +
ProteinDrug modified +
FragmentReplacedModification modified +
ReferenceRNASequence modified +
EntityFunctionalStatus modified +
StableIdentifierReleaseStatus modified +
FunctionalStatus modified +
GO_CellularComponent modified +
NegativeGeneExpressionRegulation modified +
Taxon modified +
GenomeEncodedEntity modified +
GroupModifiedResidue modified +
ReferenceDatabase modified +
DefinedSet modified +
ReferenceGroup modified +
DatabaseIdentifier modified +
NegativePrecedingEventReason modified +
ModifiedNucleotide modified +
Regulation modified +
Polymerisation modified +
CellLineagePath modified +
ReferenceMolecule modified +
GO_MolecularFunction modified +
Species modified +
RNADrug modified +
ReferenceIsoform modified +
ReplacedResidue modified +
DrugActionType modified +
Pathway modified +
EvidenceType modified +
Publication modified +
LiteratureReference modified +
GO_BiologicalProcess modified +
DefinedSet reviewed +
SimpleEntity reviewed +
OtherEntity reviewed +
EntityWithAccessionedSequence reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
PhysicalEntity reviewed +
Drug reviewed +
FailedReaction reviewed +
Polymer reviewed +
Complex reviewed +
EntitySet reviewed +
Reaction reviewed +
Depolymerisation reviewed +
InteractionEvent reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
Cell reviewed +
CellLineagePath reviewed +
ReactionlikeEvent reviewed +
Polymerisation reviewed +
CandidateSet reviewed +
Pathway reviewed +
ProteinDrug reviewed +
CellDevelopmentStep reviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
ReferenceDatabase created 1
DefinedSet created 1
ReferenceGroup created 1
DatabaseIdentifier created 1
Taxon created 1
GenomeEncodedEntity created 1
GroupModifiedResidue created 1
Regulation created 1
NegativePrecedingEventReason created 1
ModifiedNucleotide created 1
RNADrug created 1
ReferenceIsoform created 1
ReplacedResidue created 1
Polymerisation created 1
CellLineagePath created 1
ReferenceMolecule created 1
Species created 1
GO_MolecularFunction created 1
EvidenceType created 1
Publication created 1
LiteratureReference created 1
GO_BiologicalProcess created 1
DrugActionType created 1
Pathway created 1
Book created 1
NegativePrecedingEvent created 1
ReferenceSequence created 1
RetractionStatus created 1
Event created 1
Compartment created 1
FailedReaction created 1
FragmentModification created 1
AbstractModifiedResidue created 1
_DeletedInstance created 1
NonsenseMutation created 1
Person created 1
PhysicalEntityCellType created 1
URL created 1
GeneticallyModifiedResidue created 1
Depolymerisation created 1
ReferenceTherapeutic created 1
CandidateSet created 1
TranslationalModification created 1
IntraChainCrosslinkedResidue created 1
Cell created 1
TranscriptionalModification created 1
StableIdentifierReleaseStatus created 1
EntityFunctionalStatus created 1
FunctionalStatus created 1
GO_CellularComponent created 1
NegativeGeneExpressionRegulation created 1
ReferenceEntity created 1
FragmentReplacedModification created 1
ProteinDrug created 1
ReferenceRNASequence created 1
Affiliation created 1
PsiMod created 1
Summation created 1
CellType created 1
PhysicalEntity created 1
ReviewStatus created 1
FragmentDeletionModification created 1
Reaction created 1
EntitySet created 1
ReferenceDNASequence created 1
ExternalOntology created 1
SequenceOntology created 1
Complex created 1
Anatomy created 1
InteractionEvent created 1
FragmentInsertionModification created 1
ReactionlikeEvent created 1
InterChainCrosslinkedResidue created 1
NegativeRegulation created 1
CrosslinkedResidue created 1
CellDevelopmentStep created 1
FunctionalStatusType created 1
Requirement created 1
EntityWithAccessionedSequence created 1
ReferenceGeneProduct created 1
StableIdentifier created 1
OtherEntity created 1
_Release created 1
SimpleEntity created 1
InstanceEdit created 1
ReactionType created 1
_UpdateTracker created 1
ControlReference created 1
Polymer created 1
FrontPage created 1
Drug created 1
_Deleted created 1
ModifiedResidue created 1
CatalystActivity created 1
PositiveGeneExpressionRegulation created 1
DeletedControlledVocabulary created 1
ControlledVocabulary created 1
CatalystActivityReference created 1
DatabaseObject created 1
RegulationReference created 1
PositiveRegulation created 1
BlackBoxEvent created 1
ChemicalDrug created 1
Disease created 1
Figure created 1
PathwayDiagram created 1
StableIdentifierHistory created 1
MarkerReference created 1
FailedReaction structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
BlackBoxEvent structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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