Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymer created 1
CatalystActivityReference created 1
ExternalOntology created 1
PathwayDiagram created 1
EntityWithAccessionedSequence created 1
ReferenceTherapeutic created 1
Disease created 1
Drug created 1
CellDevelopmentStep created 1
InstanceEdit created 1
ReviewStatus created 1
EntityFunctionalStatus created 1
GroupModifiedResidue created 1
Reaction created 1
Anatomy created 1
Affiliation created 1
ReplacedResidue created 1
FunctionalStatus created 1
ReferenceEntity created 1
GO_CellularComponent created 1
Cell created 1
Regulation created 1
GeneticallyModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
_Release created 1
ReferenceDatabase created 1
CrosslinkedResidue created 1
PhysicalEntityCellType created 1
Species created 1
TranslationalModification created 1
ReferenceDNASequence created 1
AbstractModifiedResidue created 1
ReactionType created 1
Polymerisation created 1
DeletedControlledVocabulary created 1
Complex created 1
GO_MolecularFunction created 1
Requirement created 1
DefinedSet created 1
URL created 1
PhysicalEntity created 1
Compartment created 1
FunctionalStatusType created 1
FragmentInsertionModification created 1
ControlledVocabulary created 1
PositiveRegulation created 1
Person created 1
NegativePrecedingEventReason created 1
_UpdateTracker created 1
FrontPage created 1
MarkerReference created 1
FragmentDeletionModification created 1
Figure created 1
GO_BiologicalProcess created 1
SequenceOntology created 1
PsiMod created 1
ReferenceRNASequence created 1
InterChainCrosslinkedResidue created 1
DatabaseIdentifier created 1
ReferenceMolecule created 1
ModifiedNucleotide created 1
ProteinDrug created 1
RNADrug created 1
CatalystActivity created 1
Pathway created 1
FragmentReplacedModification created 1
StableIdentifier created 1
Summation created 1
FailedReaction created 1
InteractionEvent created 1
DatabaseObject created 1
SimpleEntity created 1
ChemicalDrug created 1
EntitySet created 1
PositiveGeneExpressionRegulation created 1
NegativePrecedingEvent created 1
NegativeRegulation created 1
ReferenceGeneProduct created 1
CandidateSet created 1
Book created 1
ReferenceIsoform created 1
Publication created 1
OtherEntity created 1
BlackBoxEvent created 1
RetractionStatus created 1
StableIdentifierHistory created 1
CellLineagePath created 1
TranscriptionalModification created 1
ReferenceSequence created 1
Event created 1
NonsenseMutation created 1
CellType created 1
IntraChainCrosslinkedResidue created 1
Taxon created 1
ModifiedResidue created 1
LiteratureReference created 1
DrugActionType created 1
ReferenceGroup created 1
_DeletedInstance created 1
ReactionlikeEvent created 1
EvidenceType created 1
RegulationReference created 1
StableIdentifierReleaseStatus created 1
_Deleted created 1
GenomeEncodedEntity created 1
Depolymerisation created 1
ControlReference created 1
FragmentModification created 1
FailedReaction structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
Event structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Polymerisation structureModified +
Drug authored 1
CellDevelopmentStep authored +
DefinedSet authored 1
ProteinDrug authored 1
Complex authored 1
RNADrug authored 1
EntityWithAccessionedSequence authored 1
Event authored +
Polymerisation authored +
Polymer authored 1
CellLineagePath authored +
InteractionEvent authored +
FailedReaction authored +
Reaction authored +
Pathway authored +
PhysicalEntity authored 1
ReactionlikeEvent authored +
Cell authored 1
EntitySet authored 1
SimpleEntity authored 1
ChemicalDrug authored 1
BlackBoxEvent authored +
OtherEntity authored 1
CandidateSet authored 1
Depolymerisation authored +
GenomeEncodedEntity authored 1
BlackBoxEvent revised +
OtherEntity revised +
CandidateSet revised +
GenomeEncodedEntity revised +
Depolymerisation revised +
ReactionlikeEvent revised +
Cell revised +
EntitySet revised +
SimpleEntity revised +
ChemicalDrug revised +
InteractionEvent revised +
Reaction revised +
FailedReaction revised +
PhysicalEntity revised +
Pathway revised +
Complex revised +
ProteinDrug revised +
RNADrug revised +
EntityWithAccessionedSequence revised +
Drug revised +
CellDevelopmentStep revised +
DefinedSet revised +
Event revised +
Polymerisation revised +
CellLineagePath revised +
Polymer revised +
PhysicalEntity reviewed +
Pathway reviewed +
InteractionEvent reviewed +
FailedReaction reviewed +
Reaction reviewed +
Polymerisation reviewed +
Polymer reviewed +
CellLineagePath reviewed +
Complex reviewed +
ProteinDrug reviewed +
RNADrug reviewed +
EntityWithAccessionedSequence reviewed +
CellDevelopmentStep reviewed +
DefinedSet reviewed +
Drug reviewed +
Event reviewed +
CandidateSet reviewed +
GenomeEncodedEntity reviewed +
Depolymerisation reviewed +
BlackBoxEvent reviewed +
OtherEntity reviewed +
Cell reviewed +
EntitySet reviewed +
SimpleEntity reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
Pathway edited +
PhysicalEntity edited +
InteractionEvent edited +
Reaction edited +
FailedReaction edited +
Polymerisation edited +
CellLineagePath edited +
Polymer edited +
DefinedSet edited +
Drug edited +
CellDevelopmentStep edited +
RNADrug edited +
ProteinDrug edited +
EntityWithAccessionedSequence edited +
Complex edited +
Event edited +
CandidateSet edited +
Depolymerisation edited +
GenomeEncodedEntity edited +
BlackBoxEvent edited +
OtherEntity edited +
Cell edited +
EntitySet edited +
ChemicalDrug edited +
SimpleEntity edited +
ReactionlikeEvent edited +
_Deleted replacementInstances +
ModifiedResidue modified +
Taxon modified +
IntraChainCrosslinkedResidue modified +
CellType modified +
NonsenseMutation modified +
Event modified +
ReferenceSequence modified +
TranscriptionalModification modified +
CellLineagePath modified +
StableIdentifierHistory modified +
RetractionStatus modified +
FragmentModification modified +
ControlReference modified +
Depolymerisation modified +
_Deleted modified +
GenomeEncodedEntity modified +
StableIdentifierReleaseStatus modified +
RegulationReference modified +
ReactionlikeEvent modified +
EvidenceType modified +
_DeletedInstance modified +
DrugActionType modified +
ReferenceGroup modified +
LiteratureReference modified +
InteractionEvent modified +
DatabaseObject modified +
FailedReaction modified +
Summation modified +
StableIdentifier modified +
FragmentReplacedModification modified +
Pathway modified +
CatalystActivity modified +
RNADrug modified +
ProteinDrug modified +
ReferenceMolecule modified +
ModifiedNucleotide modified +
DatabaseIdentifier modified +
BlackBoxEvent modified +
OtherEntity modified +
ReferenceIsoform modified +
Publication modified +
CandidateSet modified +
Book modified +
ReferenceGeneProduct modified +
NegativeRegulation modified +
PositiveGeneExpressionRegulation modified +
NegativePrecedingEvent modified +
EntitySet modified +
SimpleEntity modified +
ChemicalDrug modified +
PositiveRegulation modified +
Person modified +
NegativePrecedingEventReason modified +
ControlledVocabulary modified +
FragmentInsertionModification modified +
FunctionalStatusType modified +
PhysicalEntity modified +
URL modified +
Compartment modified +
DefinedSet modified +
Requirement modified +
Complex modified +
DeletedControlledVocabulary modified +
GO_MolecularFunction modified +
Polymerisation modified +
ReactionType modified +
InterChainCrosslinkedResidue modified +
ReferenceRNASequence modified +
PsiMod modified +
SequenceOntology modified +
GO_BiologicalProcess modified +
Figure modified +
FragmentDeletionModification modified +
MarkerReference modified +
FrontPage modified +
_UpdateTracker modified +
Reaction modified +
Anatomy modified +
GroupModifiedResidue modified +
EntityFunctionalStatus modified +
ReviewStatus modified +
InstanceEdit modified +
Drug modified +
Disease modified +
CellDevelopmentStep modified +
EntityWithAccessionedSequence modified +
ReferenceTherapeutic modified +
PathwayDiagram modified +
ExternalOntology modified +
CatalystActivityReference modified +
Polymer modified +
AbstractModifiedResidue modified +
ReferenceDNASequence modified +
TranslationalModification modified +
Species modified +
PhysicalEntityCellType modified +
CrosslinkedResidue modified +
ReferenceDatabase modified +
NegativeGeneExpressionRegulation modified +
_Release modified +
GeneticallyModifiedResidue modified +
Cell modified +
Regulation modified +
GO_CellularComponent modified +
ReferenceEntity modified +
FunctionalStatus modified +
Affiliation modified +
ReplacedResidue modified +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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