Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Reaction structureModified +
ReactionlikeEvent structureModified +
CellDevelopmentStep structureModified +
Pathway structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
BlackBoxEvent structureModified +
Event structureModified +
GenomeEncodedEntity reviewed +
Event reviewed +
SimpleEntity reviewed +
OtherEntity reviewed +
BlackBoxEvent reviewed +
FailedReaction reviewed +
Depolymerisation reviewed +
Polymerisation reviewed +
CellDevelopmentStep reviewed +
Pathway reviewed +
Reaction reviewed +
Complex reviewed +
ChemicalDrug reviewed +
ReactionlikeEvent reviewed +
CandidateSet reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
InteractionEvent reviewed +
RNADrug reviewed +
CellLineagePath reviewed +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
Polymer reviewed +
DefinedSet reviewed +
Drug reviewed +
Requirement modified +
EntitySet modified +
EntityWithAccessionedSequence modified +
Publication modified +
PathwayDiagram modified +
NonsenseMutation modified +
Polymer modified +
CatalystActivity modified +
StableIdentifier modified +
ReactionType modified +
ReferenceTherapeutic modified +
EvidenceType modified +
ReferenceDatabase modified +
_DeletedInstance modified +
Depolymerisation modified +
CrosslinkedResidue modified +
CellDevelopmentStep modified +
_Deleted modified +
FragmentDeletionModification modified +
Compartment modified +
PsiMod modified +
GO_MolecularFunction modified +
PhysicalEntity modified +
FragmentReplacedModification modified +
ReferenceDNASequence modified +
Species modified +
CellLineagePath modified +
ControlReference modified +
RNADrug modified +
CellType modified +
NegativePrecedingEvent modified +
SequenceOntology modified +
BlackBoxEvent modified +
OtherEntity modified +
Event modified +
Person modified +
ControlledVocabulary modified +
CatalystActivityReference modified +
GenomeEncodedEntity modified +
TranslationalModification modified +
Polymerisation modified +
StableIdentifierHistory modified +
DeletedControlledVocabulary modified +
CandidateSet modified +
ChemicalDrug modified +
Reaction modified +
Complex modified +
LiteratureReference modified +
RetractionStatus modified +
InteractionEvent modified +
GO_BiologicalProcess modified +
Book modified +
ProteinDrug modified +
Cell modified +
DatabaseObject modified +
NegativeGeneExpressionRegulation modified +
ReferenceGroup modified +
TranscriptionalModification modified +
_Release modified +
RegulationReference modified +
FragmentInsertionModification modified +
ReferenceMolecule modified +
ModifiedResidue modified +
URL modified +
DefinedSet modified +
Regulation modified +
PhysicalEntityCellType modified +
ReferenceSequence modified +
Affiliation modified +
SimpleEntity modified +
EntityFunctionalStatus modified +
Summation modified +
Anatomy modified +
Figure modified +
Disease modified +
PositiveGeneExpressionRegulation modified +
_UpdateTracker modified +
NegativeRegulation modified +
ReactionlikeEvent modified +
ReferenceGeneProduct modified +
Pathway modified +
ExternalOntology modified +
InterChainCrosslinkedResidue modified +
DatabaseIdentifier modified +
Taxon modified +
FragmentModification modified +
DrugActionType modified +
FrontPage modified +
ReviewStatus modified +
InstanceEdit modified +
GeneticallyModifiedResidue modified +
ReferenceEntity modified +
NegativePrecedingEventReason modified +
Drug modified +
ReferenceRNASequence modified +
MarkerReference modified +
FunctionalStatus modified +
ModifiedNucleotide modified +
FunctionalStatusType modified +
StableIdentifierReleaseStatus modified +
FailedReaction modified +
GroupModifiedResidue modified +
AbstractModifiedResidue modified +
PositiveRegulation modified +
ReplacedResidue modified +
GO_CellularComponent modified +
IntraChainCrosslinkedResidue modified +
ReferenceIsoform modified +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
EntitySet authored 1
InteractionEvent authored +
ProteinDrug authored 1
Cell authored 1
RNADrug authored 1
CellLineagePath authored +
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
Polymer authored 1
DefinedSet authored 1
Drug authored 1
Event authored +
SimpleEntity authored 1
GenomeEncodedEntity authored 1
BlackBoxEvent authored +
OtherEntity authored 1
FailedReaction authored +
Depolymerisation authored +
Polymerisation authored +
Pathway authored +
CellDevelopmentStep authored +
ReactionlikeEvent authored +
CandidateSet authored 1
ChemicalDrug authored 1
Complex authored 1
Reaction authored +
FragmentReplacedModification created 1
Species created 1
RNADrug created 1
CellLineagePath created 1
ControlReference created 1
ReferenceDNASequence created 1
GO_MolecularFunction created 1
PhysicalEntity created 1
PsiMod created 1
Compartment created 1
NegativePrecedingEvent created 1
CellType created 1
TranslationalModification created 1
Person created 1
Event created 1
CatalystActivityReference created 1
ControlledVocabulary created 1
GenomeEncodedEntity created 1
SequenceOntology created 1
BlackBoxEvent created 1
OtherEntity created 1
RetractionStatus created 1
CandidateSet created 1
ChemicalDrug created 1
LiteratureReference created 1
Complex created 1
Reaction created 1
StableIdentifierHistory created 1
DeletedControlledVocabulary created 1
Polymerisation created 1
Publication created 1
EntityWithAccessionedSequence created 1
EntitySet created 1
Requirement created 1
CatalystActivity created 1
NonsenseMutation created 1
Polymer created 1
PathwayDiagram created 1
EvidenceType created 1
ReferenceTherapeutic created 1
ReactionType created 1
StableIdentifier created 1
_Deleted created 1
CellDevelopmentStep created 1
FragmentDeletionModification created 1
CrosslinkedResidue created 1
Depolymerisation created 1
_DeletedInstance created 1
ReferenceDatabase created 1
FrontPage created 1
ReviewStatus created 1
DrugActionType created 1
FragmentModification created 1
InterChainCrosslinkedResidue created 1
DatabaseIdentifier created 1
Taxon created 1
Drug created 1
ReferenceRNASequence created 1
ReferenceEntity created 1
GeneticallyModifiedResidue created 1
NegativePrecedingEventReason created 1
InstanceEdit created 1
AbstractModifiedResidue created 1
PositiveRegulation created 1
FailedReaction created 1
GroupModifiedResidue created 1
FunctionalStatusType created 1
ModifiedNucleotide created 1
StableIdentifierReleaseStatus created 1
MarkerReference created 1
FunctionalStatus created 1
ReferenceIsoform created 1
IntraChainCrosslinkedResidue created 1
ReplacedResidue created 1
GO_CellularComponent created 1
DatabaseObject created 1
Cell created 1
NegativeGeneExpressionRegulation created 1
ReferenceGroup created 1
InteractionEvent created 1
GO_BiologicalProcess created 1
Book created 1
ProteinDrug created 1
DefinedSet created 1
URL created 1
Regulation created 1
FragmentInsertionModification created 1
_Release created 1
TranscriptionalModification created 1
RegulationReference created 1
ModifiedResidue created 1
ReferenceMolecule created 1
Anatomy created 1
SimpleEntity created 1
EntityFunctionalStatus created 1
Summation created 1
PhysicalEntityCellType created 1
Affiliation created 1
ReferenceSequence created 1
ExternalOntology created 1
ReferenceGeneProduct created 1
Pathway created 1
ReactionlikeEvent created 1
NegativeRegulation created 1
_UpdateTracker created 1
Figure created 1
Disease created 1
PositiveGeneExpressionRegulation created 1
BlackBoxEvent revised +
OtherEntity revised +
Event revised +
SimpleEntity revised +
GenomeEncodedEntity revised +
FailedReaction revised +
Polymerisation revised +
Depolymerisation revised +
ChemicalDrug revised +
ReactionlikeEvent revised +
CandidateSet revised +
Reaction revised +
Complex revised +
Pathway revised +
CellDevelopmentStep revised +
InteractionEvent revised +
ProteinDrug revised +
EntitySet revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
Cell revised +
CellLineagePath revised +
RNADrug revised +
DefinedSet revised +
Polymer revised +
Drug revised +
Polymerisation edited +
Depolymerisation edited +
ReactionlikeEvent edited +
CandidateSet edited +
ChemicalDrug edited +
Complex edited +
Reaction edited +
Pathway edited +
CellDevelopmentStep edited +
BlackBoxEvent edited +
OtherEntity edited +
Event edited +
SimpleEntity edited +
GenomeEncodedEntity edited +
FailedReaction edited +
Polymer edited +
DefinedSet edited +
Drug edited +
InteractionEvent edited +
ProteinDrug edited +
EntitySet edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
Cell edited +
RNADrug edited +
CellLineagePath edited +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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