Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Event edited +
BlackBoxEvent edited +
ProteinDrug edited +
PhysicalEntity edited +
Complex edited +
ReactionlikeEvent edited +
InteractionEvent edited +
CandidateSet edited +
OtherEntity edited +
FailedReaction edited +
Drug edited +
Pathway edited +
EntityWithAccessionedSequence edited +
GenomeEncodedEntity edited +
Depolymerisation edited +
CellLineagePath edited +
CellDevelopmentStep edited +
Polymerisation edited +
ChemicalDrug edited +
EntitySet edited +
DefinedSet edited +
Reaction edited +
Polymer edited +
SimpleEntity edited +
Cell edited +
RNADrug edited +
ChemicalDrug revised +
Polymerisation revised +
CellDevelopmentStep revised +
CellLineagePath revised +
Depolymerisation revised +
RNADrug revised +
SimpleEntity revised +
Cell revised +
Polymer revised +
Reaction revised +
DefinedSet revised +
EntitySet revised +
Pathway revised +
Drug revised +
FailedReaction revised +
CandidateSet revised +
OtherEntity revised +
InteractionEvent revised +
ReactionlikeEvent revised +
BlackBoxEvent revised +
Complex revised +
Event revised +
ProteinDrug revised +
PhysicalEntity revised +
GenomeEncodedEntity revised +
EntityWithAccessionedSequence revised +
Polymerisation authored +
ChemicalDrug authored 1
CellLineagePath authored +
Depolymerisation authored +
CellDevelopmentStep authored +
Polymer authored 1
Cell authored 1
SimpleEntity authored 1
RNADrug authored 1
EntitySet authored 1
DefinedSet authored 1
Reaction authored +
Drug authored 1
Pathway authored +
FailedReaction authored +
Event authored +
BlackBoxEvent authored +
PhysicalEntity authored 1
ProteinDrug authored 1
Complex authored 1
ReactionlikeEvent authored +
InteractionEvent authored +
CandidateSet authored 1
OtherEntity authored 1
GenomeEncodedEntity authored 1
EntityWithAccessionedSequence authored 1
Reaction internalReviewed +
ReactionlikeEvent internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent structureModified +
Event structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
Reaction structureModified +
ChemicalDrug reviewed +
Polymerisation reviewed +
CellDevelopmentStep reviewed +
Depolymerisation reviewed +
CellLineagePath reviewed +
RNADrug reviewed +
SimpleEntity reviewed +
Cell reviewed +
Polymer reviewed +
Reaction reviewed +
DefinedSet reviewed +
EntitySet reviewed +
Drug reviewed +
FailedReaction reviewed +
Pathway reviewed +
CandidateSet reviewed +
OtherEntity reviewed +
InteractionEvent reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
BlackBoxEvent reviewed +
PhysicalEntity reviewed +
ProteinDrug reviewed +
Complex reviewed +
GenomeEncodedEntity reviewed +
EntityWithAccessionedSequence reviewed +
DefinedSet created 1
EntitySet created 1
Cell created 1
FragmentInsertionModification created 1
ControlledVocabulary created 1
CellDevelopmentStep created 1
CatalystActivityReference created 1
DeletedControlledVocabulary created 1
RetractionStatus created 1
Figure created 1
LiteratureReference created 1
ReferenceGroup created 1
FunctionalStatus created 1
EntityWithAccessionedSequence created 1
GO_BiologicalProcess created 1
Summation created 1
GroupModifiedResidue created 1
GenomeEncodedEntity created 1
ReferenceRNASequence created 1
FragmentReplacedModification created 1
CandidateSet created 1
OtherEntity created 1
EntityFunctionalStatus created 1
ReferenceSequence created 1
DrugActionType created 1
ReplacedResidue created 1
SequenceOntology created 1
PhysicalEntity created 1
FrontPage created 1
EvidenceType created 1
FailedReaction created 1
PositiveGeneExpressionRegulation created 1
ModifiedNucleotide created 1
Compartment created 1
CatalystActivity created 1
DatabaseObject created 1
ReferenceGeneProduct created 1
ReactionType created 1
RNADrug created 1
StableIdentifier created 1
PositiveRegulation created 1
NegativePrecedingEvent created 1
ReferenceEntity created 1
TranslationalModification created 1
_UpdateTracker created 1
InstanceEdit created 1
Book created 1
GeneticallyModifiedResidue created 1
ModifiedResidue created 1
ReferenceDNASequence created 1
Affiliation created 1
FragmentModification created 1
NonsenseMutation created 1
URL created 1
StableIdentifierHistory created 1
PathwayDiagram created 1
Publication created 1
ReferenceIsoform created 1
Disease created 1
Taxon created 1
Complex created 1
ReactionlikeEvent created 1
Person created 1
ExternalOntology created 1
PhysicalEntityCellType created 1
_DeletedInstance created 1
Species created 1
Pathway created 1
FragmentDeletionModification created 1
Reaction created 1
GO_CellularComponent created 1
_Deleted created 1
Anatomy created 1
StableIdentifierReleaseStatus created 1
Depolymerisation created 1
AbstractModifiedResidue created 1
ReferenceDatabase created 1
InterChainCrosslinkedResidue created 1
ChemicalDrug created 1
DatabaseIdentifier created 1
IntraChainCrosslinkedResidue created 1
NegativeRegulation created 1
Regulation created 1
ProteinDrug created 1
NegativePrecedingEventReason created 1
CellType created 1
RegulationReference created 1
NegativeGeneExpressionRegulation created 1
Drug created 1
PsiMod created 1
CrosslinkedResidue created 1
SimpleEntity created 1
Polymer created 1
TranscriptionalModification created 1
CellLineagePath created 1
Requirement created 1
MarkerReference created 1
ReviewStatus created 1
ReferenceTherapeutic created 1
_Release created 1
Polymerisation created 1
FunctionalStatusType created 1
InteractionEvent created 1
ControlReference created 1
BlackBoxEvent created 1
Event created 1
GO_MolecularFunction created 1
ReferenceMolecule created 1
_Deleted replacementInstances +
_Release modified +
ReferenceTherapeutic modified +
Polymerisation modified +
MarkerReference modified +
Requirement modified +
CellLineagePath modified +
TranscriptionalModification modified +
ReviewStatus modified +
SimpleEntity modified +
Polymer modified +
CrosslinkedResidue modified +
ReferenceMolecule modified +
InteractionEvent modified +
ControlReference modified +
BlackBoxEvent modified +
Event modified +
GO_MolecularFunction modified +
FunctionalStatusType modified +
ChemicalDrug modified +
DatabaseIdentifier modified +
AbstractModifiedResidue modified +
Depolymerisation modified +
InterChainCrosslinkedResidue modified +
ReferenceDatabase modified +
StableIdentifierReleaseStatus modified +
GO_CellularComponent modified +
Reaction modified +
Anatomy modified +
_Deleted modified +
NegativeGeneExpressionRegulation modified +
RegulationReference modified +
CellType modified +
PsiMod modified +
Drug modified +
NegativePrecedingEventReason modified +
ProteinDrug modified +
Regulation modified +
NegativeRegulation modified +
IntraChainCrosslinkedResidue modified +
_UpdateTracker modified +
TranslationalModification modified +
PositiveRegulation modified +
NegativePrecedingEvent modified +
ReferenceEntity modified +
ReactionType modified +
ReferenceGeneProduct modified +
RNADrug modified +
StableIdentifier modified +
PositiveGeneExpressionRegulation modified +
Compartment modified +
ModifiedNucleotide modified +
CatalystActivity modified +
DatabaseObject modified +
PhysicalEntityCellType modified +
_DeletedInstance modified +
ExternalOntology modified +
Person modified +
FragmentDeletionModification modified +
Pathway modified +
Species modified +
ReferenceIsoform modified +
Disease modified +
Publication modified +
ReactionlikeEvent modified +
Taxon modified +
Complex modified +
URL modified +
FragmentModification modified +
Affiliation modified +
NonsenseMutation modified +
PathwayDiagram modified +
StableIdentifierHistory modified +
Book modified +
GeneticallyModifiedResidue modified +
InstanceEdit modified +
ModifiedResidue modified +
ReferenceDNASequence modified +
CatalystActivityReference modified +
DeletedControlledVocabulary modified +
CellDevelopmentStep modified +
ControlledVocabulary modified +
FragmentInsertionModification modified +
Cell modified +
DefinedSet modified +
EntitySet modified +
EvidenceType modified +
FailedReaction modified +
EntityFunctionalStatus modified +
CandidateSet modified +
OtherEntity modified +
DrugActionType modified +
ReferenceSequence modified +
FragmentReplacedModification modified +
ReferenceRNASequence modified +
FrontPage modified +
SequenceOntology modified +
PhysicalEntity modified +
ReplacedResidue modified +
GenomeEncodedEntity modified +
GroupModifiedResidue modified +
Summation modified +
GO_BiologicalProcess modified +
FunctionalStatus modified +
LiteratureReference modified +
RetractionStatus modified +
Figure modified +
ReferenceGroup modified +
EntityWithAccessionedSequence modified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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