Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
ReactionlikeEvent reviewed +
EntityWithAccessionedSequence reviewed +
Drug reviewed +
CellLineagePath reviewed +
CellDevelopmentStep reviewed +
PhysicalEntity reviewed +
Cell reviewed +
Complex reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
OtherEntity reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
Event reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
Reaction reviewed +
Polymer reviewed +
SimpleEntity reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
CandidateSet reviewed +
Polymerisation reviewed +
Pathway reviewed +
BlackBoxEvent reviewed +
DeletedControlledVocabulary modified +
Drug modified +
ModifiedNucleotide modified +
FunctionalStatusType modified +
FragmentDeletionModification modified +
ModifiedResidue modified +
NegativePrecedingEvent modified +
EntityWithAccessionedSequence modified +
PsiMod modified +
PhysicalEntityCellType modified +
RNADrug modified +
ChemicalDrug modified +
StableIdentifierReleaseStatus modified +
Compartment modified +
StableIdentifierHistory modified +
Cell modified +
DatabaseObject modified +
GenomeEncodedEntity modified +
GeneticallyModifiedResidue modified +
GO_BiologicalProcess modified +
ReplacedResidue modified +
Anatomy modified +
Species modified +
CatalystActivity modified +
SequenceOntology modified +
CellLineagePath modified +
EntityFunctionalStatus modified +
Requirement modified +
MarkerReference modified +
ExternalOntology modified +
ReferenceMolecule modified +
PhysicalEntity modified +
FragmentReplacedModification modified +
Disease modified +
ReactionType modified +
EvidenceType modified +
Complex modified +
Depolymerisation modified +
InteractionEvent modified +
Regulation modified +
ReferenceGeneProduct modified +
NegativeRegulation modified +
ReferenceEntity modified +
CandidateSet modified +
Publication modified +
StableIdentifier modified +
Person modified +
ReviewStatus modified +
Pathway modified +
Reaction modified +
Polymer modified +
SimpleEntity modified +
CellType modified +
ProteinDrug modified +
DrugActionType modified +
EntitySet modified +
Book modified +
ReferenceIsoform modified +
ReferenceDNASequence modified +
CellDevelopmentStep modified +
NegativeGeneExpressionRegulation modified +
_DeletedInstance modified +
FrontPage modified +
_Deleted modified +
NegativePrecedingEventReason modified +
OtherEntity modified +
GO_MolecularFunction modified +
TranscriptionalModification modified +
ReferenceDatabase modified +
URL modified +
ControlledVocabulary modified +
Summation modified +
ControlReference modified +
PathwayDiagram modified +
Event modified +
IntraChainCrosslinkedResidue modified +
ReferenceSequence modified +
ReferenceRNASequence modified +
LiteratureReference modified +
Polymerisation modified +
InterChainCrosslinkedResidue modified +
BlackBoxEvent modified +
GO_CellularComponent modified +
FunctionalStatus modified +
FragmentInsertionModification modified +
Figure modified +
CatalystActivityReference modified +
TranslationalModification modified +
GroupModifiedResidue modified +
AbstractModifiedResidue modified +
ReactionlikeEvent modified +
DatabaseIdentifier modified +
FailedReaction modified +
Affiliation modified +
InstanceEdit modified +
_Release modified +
PositiveRegulation modified +
ReferenceGroup modified +
DefinedSet modified +
_UpdateTracker modified +
PositiveGeneExpressionRegulation modified +
NonsenseMutation modified +
RetractionStatus modified +
ReferenceTherapeutic modified +
RegulationReference modified +
Taxon modified +
FragmentModification modified +
CrosslinkedResidue modified +
Drug revised +
CellLineagePath revised +
CellDevelopmentStep revised +
ReactionlikeEvent revised +
EntityWithAccessionedSequence revised +
FailedReaction revised +
OtherEntity revised +
ChemicalDrug revised +
RNADrug revised +
PhysicalEntity revised +
Cell revised +
Complex revised +
Depolymerisation revised +
DefinedSet revised +
InteractionEvent revised +
Event revised +
GenomeEncodedEntity revised +
CandidateSet revised +
Polymerisation revised +
Pathway revised +
BlackBoxEvent revised +
Reaction revised +
Polymer revised +
SimpleEntity revised +
ProteinDrug revised +
EntitySet revised +
BlackBoxEvent authored +
Pathway authored +
Polymerisation authored +
CandidateSet authored 1
EntitySet authored 1
ProteinDrug authored 1
SimpleEntity authored 1
Polymer authored 1
Reaction authored +
InteractionEvent authored +
GenomeEncodedEntity authored 1
Event authored +
RNADrug authored 1
OtherEntity authored 1
ChemicalDrug authored 1
FailedReaction authored +
Depolymerisation authored +
DefinedSet authored 1
Complex authored 1
Cell authored 1
PhysicalEntity authored 1
CellDevelopmentStep authored +
CellLineagePath authored +
Drug authored 1
EntityWithAccessionedSequence authored 1
ReactionlikeEvent authored +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
RegulationReference created 1
ReferenceTherapeutic created 1
RetractionStatus created 1
CrosslinkedResidue created 1
FragmentModification created 1
Taxon created 1
_UpdateTracker created 1
PositiveGeneExpressionRegulation created 1
NonsenseMutation created 1
InstanceEdit created 1
Affiliation created 1
FailedReaction created 1
DefinedSet created 1
ReferenceGroup created 1
PositiveRegulation created 1
_Release created 1
TranslationalModification created 1
AbstractModifiedResidue created 1
GroupModifiedResidue created 1
Figure created 1
CatalystActivityReference created 1
FragmentInsertionModification created 1
FunctionalStatus created 1
ReactionlikeEvent created 1
DatabaseIdentifier created 1
BlackBoxEvent created 1
InterChainCrosslinkedResidue created 1
Polymerisation created 1
LiteratureReference created 1
GO_CellularComponent created 1
PathwayDiagram created 1
ControlReference created 1
Summation created 1
ControlledVocabulary created 1
ReferenceRNASequence created 1
ReferenceSequence created 1
Event created 1
IntraChainCrosslinkedResidue created 1
OtherEntity created 1
NegativePrecedingEventReason created 1
_Deleted created 1
FrontPage created 1
ReferenceDatabase created 1
TranscriptionalModification created 1
URL created 1
GO_MolecularFunction created 1
CellDevelopmentStep created 1
ReferenceIsoform created 1
ReferenceDNASequence created 1
Book created 1
_DeletedInstance created 1
NegativeGeneExpressionRegulation created 1
ReviewStatus created 1
Pathway created 1
StableIdentifier created 1
Publication created 1
Person created 1
CandidateSet created 1
CellType created 1
DrugActionType created 1
EntitySet created 1
ProteinDrug created 1
SimpleEntity created 1
Reaction created 1
Polymer created 1
Regulation created 1
InteractionEvent created 1
ReferenceEntity created 1
NegativeRegulation created 1
ReferenceGeneProduct created 1
MarkerReference created 1
Requirement created 1
Depolymerisation created 1
EvidenceType created 1
Complex created 1
Disease created 1
ReactionType created 1
FragmentReplacedModification created 1
ReferenceMolecule created 1
PhysicalEntity created 1
ExternalOntology created 1
CellLineagePath created 1
SequenceOntology created 1
CatalystActivity created 1
Species created 1
EntityFunctionalStatus created 1
ReplacedResidue created 1
GO_BiologicalProcess created 1
GeneticallyModifiedResidue created 1
Anatomy created 1
DatabaseObject created 1
GenomeEncodedEntity created 1
ChemicalDrug created 1
RNADrug created 1
PhysicalEntityCellType created 1
PsiMod created 1
Cell created 1
Compartment created 1
StableIdentifierHistory created 1
StableIdentifierReleaseStatus created 1
FragmentDeletionModification created 1
FunctionalStatusType created 1
ModifiedNucleotide created 1
Drug created 1
DeletedControlledVocabulary created 1
EntityWithAccessionedSequence created 1
NegativePrecedingEvent created 1
ModifiedResidue created 1
CellLineagePath edited +
CellDevelopmentStep edited +
Drug edited +
ReactionlikeEvent edited +
EntityWithAccessionedSequence edited +
RNADrug edited +
OtherEntity edited +
ChemicalDrug edited +
FailedReaction edited +
Complex edited +
Depolymerisation edited +
DefinedSet edited +
PhysicalEntity edited +
Cell edited +
InteractionEvent edited +
Event edited +
GenomeEncodedEntity edited +
Pathway edited +
BlackBoxEvent edited +
CandidateSet edited +
Polymerisation edited +
SimpleEntity edited +
ProteinDrug edited +
EntitySet edited +
Reaction edited +
Polymer edited +
BlackBoxEvent structureModified +
Pathway structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Event structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

Follow Reactome