Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Reaction modified +
Regulation modified +
PathwayDiagram modified +
GO_CellularComponent modified +
ProteinDrug modified +
Requirement modified +
Drug modified +
_Release modified +
FragmentInsertionModification modified +
EntityWithAccessionedSequence modified +
ReferenceMolecule modified +
NegativeRegulation modified +
DeletedControlledVocabulary modified +
LiteratureReference modified +
ReplacedResidue modified +
CellLineagePath modified +
URL modified +
StableIdentifier modified +
Figure modified +
Depolymerisation modified +
FunctionalStatus modified +
ReferenceIsoform modified +
Compartment modified +
Anatomy modified +
MarkerReference modified +
FragmentModification modified +
FunctionalStatusType modified +
OtherEntity modified +
Pathway modified +
ReferenceGeneProduct modified +
Complex modified +
ControlReference modified +
NegativePrecedingEvent modified +
ReactionType modified +
Polymer modified +
BlackBoxEvent modified +
InterChainCrosslinkedResidue modified +
ReferenceTherapeutic modified +
ExternalOntology modified +
_Deleted modified +
ModifiedResidue modified +
NonsenseMutation modified +
ReactionlikeEvent modified +
CandidateSet modified +
EvidenceType modified +
FragmentDeletionModification modified +
PsiMod modified +
GroupModifiedResidue modified +
TranscriptionalModification modified +
NegativeGeneExpressionRegulation modified +
PositiveGeneExpressionRegulation modified +
SimpleEntity modified +
Disease modified +
Cell modified +
EntitySet modified +
InteractionEvent modified +
PhysicalEntity modified +
GeneticallyModifiedResidue modified +
PositiveRegulation modified +
Polymerisation modified +
ReferenceRNASequence modified +
CatalystActivity modified +
StableIdentifierReleaseStatus modified +
GO_MolecularFunction modified +
FrontPage modified +
DatabaseIdentifier modified +
CrosslinkedResidue modified +
ModifiedNucleotide modified +
ReviewStatus modified +
AbstractModifiedResidue modified +
Publication modified +
GenomeEncodedEntity modified +
RNADrug modified +
DrugActionType modified +
CatalystActivityReference modified +
FragmentReplacedModification modified +
ReferenceSequence modified +
Species modified +
GO_BiologicalProcess modified +
RegulationReference modified +
Taxon modified +
_UpdateTracker modified +
RetractionStatus modified +
IntraChainCrosslinkedResidue modified +
DatabaseObject modified +
ReferenceEntity modified +
_DeletedInstance modified +
ReferenceDatabase modified +
ControlledVocabulary modified +
Event modified +
CellDevelopmentStep modified +
SequenceOntology modified +
PhysicalEntityCellType modified +
Affiliation modified +
Book modified +
ChemicalDrug modified +
ReferenceGroup modified +
InstanceEdit modified +
TranslationalModification modified +
Person modified +
FailedReaction modified +
CellType modified +
ReferenceDNASequence modified +
DefinedSet modified +
NegativePrecedingEventReason modified +
StableIdentifierHistory modified +
Summation modified +
EntityFunctionalStatus modified +
OtherEntity created 1
FunctionalStatusType created 1
Pathway created 1
ReferenceGeneProduct created 1
Complex created 1
ControlReference created 1
Depolymerisation created 1
FunctionalStatus created 1
ReferenceIsoform created 1
Compartment created 1
MarkerReference created 1
FragmentModification created 1
Anatomy created 1
InterChainCrosslinkedResidue created 1
NegativePrecedingEvent created 1
ReactionType created 1
Polymer created 1
BlackBoxEvent created 1
GO_CellularComponent created 1
Requirement created 1
ProteinDrug created 1
Drug created 1
_Release created 1
Reaction created 1
PathwayDiagram created 1
Regulation created 1
NegativeRegulation created 1
DeletedControlledVocabulary created 1
LiteratureReference created 1
ReplacedResidue created 1
URL created 1
CellLineagePath created 1
StableIdentifier created 1
Figure created 1
FragmentInsertionModification created 1
EntityWithAccessionedSequence created 1
ReferenceMolecule created 1
Cell created 1
EntitySet created 1
InteractionEvent created 1
PhysicalEntity created 1
GeneticallyModifiedResidue created 1
SimpleEntity created 1
Disease created 1
FrontPage created 1
DatabaseIdentifier created 1
PositiveRegulation created 1
Polymerisation created 1
CatalystActivity created 1
ReferenceRNASequence created 1
StableIdentifierReleaseStatus created 1
GO_MolecularFunction created 1
ModifiedResidue created 1
NonsenseMutation created 1
ReactionlikeEvent created 1
CandidateSet created 1
FragmentDeletionModification created 1
EvidenceType created 1
ExternalOntology created 1
ReferenceTherapeutic created 1
_Deleted created 1
GroupModifiedResidue created 1
TranscriptionalModification created 1
NegativeGeneExpressionRegulation created 1
PositiveGeneExpressionRegulation created 1
PsiMod created 1
GO_BiologicalProcess created 1
RegulationReference created 1
ReferenceSequence created 1
Species created 1
_UpdateTracker created 1
RetractionStatus created 1
Taxon created 1
Publication created 1
CrosslinkedResidue created 1
ReviewStatus created 1
ModifiedNucleotide created 1
AbstractModifiedResidue created 1
DrugActionType created 1
CatalystActivityReference created 1
FragmentReplacedModification created 1
GenomeEncodedEntity created 1
RNADrug created 1
Person created 1
FailedReaction created 1
TranslationalModification created 1
InstanceEdit created 1
NegativePrecedingEventReason created 1
StableIdentifierHistory created 1
Summation created 1
EntityFunctionalStatus created 1
CellType created 1
ReferenceDNASequence created 1
DefinedSet created 1
ReferenceEntity created 1
_DeletedInstance created 1
ReferenceDatabase created 1
ControlledVocabulary created 1
Event created 1
IntraChainCrosslinkedResidue created 1
DatabaseObject created 1
PhysicalEntityCellType created 1
Affiliation created 1
Book created 1
ReferenceGroup created 1
ChemicalDrug created 1
CellDevelopmentStep created 1
SequenceOntology created 1
Polymerisation reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
DefinedSet reviewed +
SimpleEntity reviewed +
Depolymerisation reviewed +
Pathway reviewed +
InteractionEvent reviewed +
Cell reviewed +
OtherEntity reviewed +
EntitySet reviewed +
Complex reviewed +
PhysicalEntity reviewed +
FailedReaction reviewed +
EntityWithAccessionedSequence reviewed +
CellDevelopmentStep reviewed +
GenomeEncodedEntity reviewed +
RNADrug reviewed +
ChemicalDrug reviewed +
CellLineagePath reviewed +
Reaction reviewed +
ProteinDrug reviewed +
ReactionlikeEvent reviewed +
Event reviewed +
CandidateSet reviewed +
Drug reviewed +
BlackBoxEvent structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Reaction structureModified +
Depolymerisation structureModified +
Event structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Pathway structureModified +
InteractionEvent structureModified +
EntityWithAccessionedSequence authored 1
GenomeEncodedEntity authored 1
CellDevelopmentStep authored +
RNADrug authored 1
ChemicalDrug authored 1
CellLineagePath authored +
Reaction authored +
ProteinDrug authored 1
ReactionlikeEvent authored +
Event authored +
CandidateSet authored 1
Drug authored 1
Polymerisation authored +
Polymer authored 1
BlackBoxEvent authored +
DefinedSet authored 1
SimpleEntity authored 1
Depolymerisation authored +
InteractionEvent authored +
Pathway authored +
Cell authored 1
EntitySet authored 1
OtherEntity authored 1
PhysicalEntity authored 1
Complex authored 1
FailedReaction authored +
EntityWithAccessionedSequence edited +
CellDevelopmentStep edited +
GenomeEncodedEntity edited +
RNADrug edited +
ChemicalDrug edited +
CellLineagePath edited +
Reaction edited +
ProteinDrug edited +
ReactionlikeEvent edited +
Drug edited +
CandidateSet edited +
Event edited +
Polymer edited +
Polymerisation edited +
BlackBoxEvent edited +
DefinedSet edited +
SimpleEntity edited +
Depolymerisation edited +
InteractionEvent edited +
Pathway edited +
Cell edited +
EntitySet edited +
OtherEntity edited +
PhysicalEntity edited +
FailedReaction edited +
Complex edited +
_Deleted replacementInstances +
FailedReaction internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
ChemicalDrug revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
CellDevelopmentStep revised +
GenomeEncodedEntity revised +
RNADrug revised +
ReactionlikeEvent revised +
ProteinDrug revised +
CandidateSet revised +
Event revised +
Drug revised +
Reaction revised +
Polymerisation revised +
Polymer revised +
BlackBoxEvent revised +
DefinedSet revised +
Pathway revised +
InteractionEvent revised +
OtherEntity revised +
Cell revised +
EntitySet revised +
Complex revised +
PhysicalEntity revised +
FailedReaction revised +
SimpleEntity revised +
Depolymerisation revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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