Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Reaction structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
Pathway structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
BlackBoxEvent structureModified +
Polymerisation structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
CellDevelopmentStep authored +
InteractionEvent authored +
PhysicalEntity authored 1
Complex authored 1
FailedReaction authored +
Depolymerisation authored +
Polymerisation authored +
DefinedSet authored 1
CellLineagePath authored +
ChemicalDrug authored 1
ProteinDrug authored 1
OtherEntity authored 1
EntityWithAccessionedSequence authored 1
Drug authored 1
ReactionlikeEvent authored +
Reaction authored +
GenomeEncodedEntity authored 1
Polymer authored 1
RNADrug authored 1
Pathway authored +
EntitySet authored 1
Cell authored 1
SimpleEntity authored 1
BlackBoxEvent authored +
CandidateSet authored 1
Event authored +
_Deleted replacementInstances +
BlackBoxEvent edited +
SimpleEntity edited +
CandidateSet edited +
Event edited +
Polymer edited +
GenomeEncodedEntity edited +
Reaction edited +
Cell edited +
RNADrug edited +
Pathway edited +
EntitySet edited +
ProteinDrug edited +
ChemicalDrug edited +
CellLineagePath edited +
DefinedSet edited +
Polymerisation edited +
ReactionlikeEvent edited +
OtherEntity edited +
Drug edited +
EntityWithAccessionedSequence edited +
Complex edited +
PhysicalEntity edited +
InteractionEvent edited +
CellDevelopmentStep edited +
Depolymerisation edited +
FailedReaction edited +
BlackBoxEvent internalReviewed +
CellLineagePath internalReviewed +
Polymerisation internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
InteractionEvent internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
ProteinDrug reviewed +
ChemicalDrug reviewed +
Polymerisation reviewed +
CellLineagePath reviewed +
DefinedSet reviewed +
ReactionlikeEvent reviewed +
Drug reviewed +
OtherEntity reviewed +
EntityWithAccessionedSequence reviewed +
Complex reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
CellDevelopmentStep reviewed +
Depolymerisation reviewed +
FailedReaction reviewed +
BlackBoxEvent reviewed +
SimpleEntity reviewed +
Event reviewed +
CandidateSet reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
Reaction reviewed +
Cell reviewed +
Pathway reviewed +
RNADrug reviewed +
EntitySet reviewed +
FunctionalStatus created 1
FragmentInsertionModification created 1
StableIdentifierHistory created 1
ReferenceGroup created 1
PsiMod created 1
RetractionStatus created 1
DrugActionType created 1
GroupModifiedResidue created 1
ModifiedNucleotide created 1
ReferenceSequence created 1
LiteratureReference created 1
DefinedSet created 1
MarkerReference created 1
RegulationReference created 1
OtherEntity created 1
_UpdateTracker created 1
EntityWithAccessionedSequence created 1
_Deleted created 1
ReactionlikeEvent created 1
SequenceOntology created 1
CellDevelopmentStep created 1
ReferenceGeneProduct created 1
StableIdentifier created 1
FrontPage created 1
PhysicalEntity created 1
FunctionalStatusType created 1
Complex created 1
TranscriptionalModification created 1
CellType created 1
ReferenceMolecule created 1
FragmentDeletionModification created 1
ReviewStatus created 1
NegativePrecedingEventReason created 1
ReferenceDNASequence created 1
CandidateSet created 1
EntityFunctionalStatus created 1
Polymerisation created 1
CellLineagePath created 1
Requirement created 1
ChemicalDrug created 1
Publication created 1
ReferenceTherapeutic created 1
Drug created 1
NegativePrecedingEvent created 1
CrosslinkedResidue created 1
ReactionType created 1
StableIdentifierReleaseStatus created 1
InteractionEvent created 1
AbstractModifiedResidue created 1
Affiliation created 1
ControlledVocabulary created 1
PositiveRegulation created 1
NonsenseMutation created 1
GO_CellularComponent created 1
NegativeRegulation created 1
PhysicalEntityCellType created 1
BlackBoxEvent created 1
ReferenceEntity created 1
EvidenceType created 1
PathwayDiagram created 1
DatabaseObject created 1
ReferenceRNASequence created 1
InstanceEdit created 1
GeneticallyModifiedResidue created 1
FragmentModification created 1
Event created 1
Reaction created 1
GenomeEncodedEntity created 1
Polymer created 1
RNADrug created 1
FragmentReplacedModification created 1
ReplacedResidue created 1
GO_MolecularFunction created 1
Book created 1
ProteinDrug created 1
ModifiedResidue created 1
Species created 1
PositiveGeneExpressionRegulation created 1
GO_BiologicalProcess created 1
FailedReaction created 1
Person created 1
Compartment created 1
Taxon created 1
IntraChainCrosslinkedResidue created 1
SimpleEntity created 1
_DeletedInstance created 1
Figure created 1
Anatomy created 1
Regulation created 1
ExternalOntology created 1
URL created 1
EntitySet created 1
Pathway created 1
DeletedControlledVocabulary created 1
Disease created 1
ReferenceDatabase created 1
Cell created 1
Summation created 1
TranslationalModification created 1
DatabaseIdentifier created 1
_Release created 1
ReferenceIsoform created 1
NegativeGeneExpressionRegulation created 1
InterChainCrosslinkedResidue created 1
CatalystActivity created 1
Depolymerisation created 1
ControlReference created 1
CatalystActivityReference created 1
Summation modified +
TranslationalModification modified +
DatabaseIdentifier modified +
_Release modified +
InterChainCrosslinkedResidue modified +
ReferenceIsoform modified +
NegativeGeneExpressionRegulation modified +
CatalystActivityReference modified +
CatalystActivity modified +
ControlReference modified +
Depolymerisation modified +
SimpleEntity modified +
Figure modified +
_DeletedInstance modified +
Anatomy modified +
Regulation modified +
URL modified +
ExternalOntology modified +
Disease modified +
DeletedControlledVocabulary modified +
EntitySet modified +
Pathway modified +
Cell modified +
ReferenceDatabase modified +
ReplacedResidue modified +
ProteinDrug modified +
Book modified +
GO_MolecularFunction modified +
PositiveGeneExpressionRegulation modified +
Species modified +
ModifiedResidue modified +
GO_BiologicalProcess modified +
Person modified +
FailedReaction modified +
IntraChainCrosslinkedResidue modified +
Taxon modified +
Compartment modified +
ReferenceRNASequence modified +
DatabaseObject modified +
PathwayDiagram modified +
InstanceEdit modified +
EvidenceType modified +
ReferenceEntity modified +
BlackBoxEvent modified +
GeneticallyModifiedResidue modified +
Event modified +
FragmentModification modified +
GenomeEncodedEntity modified +
Reaction modified +
Polymer modified +
RNADrug modified +
FragmentReplacedModification modified +
ChemicalDrug modified +
Polymerisation modified +
CellLineagePath modified +
Requirement modified +
ReferenceTherapeutic modified +
Publication modified +
Drug modified +
ReactionType modified +
CrosslinkedResidue modified +
NegativePrecedingEvent modified +
PositiveRegulation modified +
ControlledVocabulary modified +
InteractionEvent modified +
AbstractModifiedResidue modified +
Affiliation modified +
StableIdentifierReleaseStatus modified +
NonsenseMutation modified +
GO_CellularComponent modified +
PhysicalEntityCellType modified +
NegativeRegulation modified +
ReviewStatus modified +
FragmentDeletionModification modified +
NegativePrecedingEventReason modified +
ReferenceDNASequence modified +
CandidateSet modified +
EntityFunctionalStatus modified +
DefinedSet modified +
RegulationReference modified +
MarkerReference modified +
OtherEntity modified +
_UpdateTracker modified +
EntityWithAccessionedSequence modified +
ReactionlikeEvent modified +
_Deleted modified +
StableIdentifier modified +
FrontPage modified +
CellDevelopmentStep modified +
SequenceOntology modified +
ReferenceGeneProduct modified +
FunctionalStatusType modified +
PhysicalEntity modified +
Complex modified +
ReferenceMolecule modified +
TranscriptionalModification modified +
CellType modified +
FunctionalStatus modified +
FragmentInsertionModification modified +
PsiMod modified +
StableIdentifierHistory modified +
ReferenceGroup modified +
DrugActionType modified +
RetractionStatus modified +
GroupModifiedResidue modified +
ModifiedNucleotide modified +
LiteratureReference modified +
ReferenceSequence modified +
Drug revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
ReactionlikeEvent revised +
CellLineagePath revised +
DefinedSet revised +
Polymerisation revised +
ChemicalDrug revised +
ProteinDrug revised +
FailedReaction revised +
Depolymerisation revised +
CellDevelopmentStep revised +
InteractionEvent revised +
PhysicalEntity revised +
Complex revised +
Event revised +
CandidateSet revised +
SimpleEntity revised +
BlackBoxEvent revised +
EntitySet revised +
RNADrug revised +
Pathway revised +
Cell revised +
Reaction revised +
GenomeEncodedEntity revised +
Polymer revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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