Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Cell revised +
FailedReaction revised +
DefinedSet revised +
EntitySet revised +
OtherEntity revised +
Polymerisation revised +
InteractionEvent revised +
CellLineagePath revised +
Pathway revised +
ChemicalDrug revised +
CandidateSet revised +
Reaction revised +
BlackBoxEvent revised +
EntityWithAccessionedSequence revised +
CellDevelopmentStep revised +
Drug revised +
PhysicalEntity revised +
ProteinDrug revised +
Event revised +
Polymer revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
Complex revised +
ReactionlikeEvent revised +
Depolymerisation revised +
RNADrug revised +
ReviewStatus modified +
FunctionalStatusType modified +
GO_MolecularFunction modified +
ModifiedNucleotide modified +
RetractionStatus modified +
PathwayDiagram modified +
ControlReference modified +
IntraChainCrosslinkedResidue modified +
ReferenceGroup modified +
Complex modified +
Event modified +
ReferenceSequence modified +
Requirement modified +
NonsenseMutation modified +
DatabaseObject modified +
ReferenceRNASequence modified +
FragmentReplacedModification modified +
Figure modified +
_DeletedInstance modified +
FragmentInsertionModification modified +
StableIdentifierHistory modified +
CellLineagePath modified +
MarkerReference modified +
DefinedSet modified +
FailedReaction modified +
SequenceOntology modified +
Depolymerisation modified +
NegativeRegulation modified +
ReferenceEntity modified +
PositiveRegulation modified +
Taxon modified +
DeletedControlledVocabulary modified +
_Release modified +
EvidenceType modified +
ReferenceDatabase modified +
ReactionType modified +
GenomeEncodedEntity modified +
Polymer modified +
RegulationReference modified +
NegativeGeneExpressionRegulation modified +
Drug modified +
GeneticallyModifiedResidue modified +
ModifiedResidue modified +
LiteratureReference modified +
BlackBoxEvent modified +
StableIdentifier modified +
ReferenceIsoform modified +
CellDevelopmentStep modified +
GO_CellularComponent modified +
URL modified +
GroupModifiedResidue modified +
StableIdentifierReleaseStatus modified +
Polymerisation modified +
CrosslinkedResidue modified +
Pathway modified +
_Deleted modified +
Cell modified +
Publication modified +
TranslationalModification modified +
PsiMod modified +
FrontPage modified +
ReactionlikeEvent modified +
PositiveGeneExpressionRegulation modified +
FragmentModification modified +
Compartment modified +
ReferenceTherapeutic modified +
SimpleEntity modified +
Disease modified +
ReplacedResidue modified +
Person modified +
EntityFunctionalStatus modified +
ExternalOntology modified +
_UpdateTracker modified +
PhysicalEntityCellType modified +
Affiliation modified +
ReferenceDNASequence modified +
ChemicalDrug modified +
FragmentDeletionModification modified +
EntitySet modified +
ReferenceGeneProduct modified +
NegativePrecedingEvent modified +
NegativePrecedingEventReason modified +
CatalystActivityReference modified +
RNADrug modified +
CatalystActivity modified +
GO_BiologicalProcess modified +
Anatomy modified +
AbstractModifiedResidue modified +
Regulation modified +
InstanceEdit modified +
Book modified +
TranscriptionalModification modified +
DatabaseIdentifier modified +
Summation modified +
PhysicalEntity modified +
ProteinDrug modified +
EntityWithAccessionedSequence modified +
CellType modified +
CandidateSet modified +
ControlledVocabulary modified +
Reaction modified +
OtherEntity modified +
FunctionalStatus modified +
InteractionEvent modified +
InterChainCrosslinkedResidue modified +
Species modified +
DrugActionType modified +
ReferenceMolecule modified +
SequenceOntology created 1
FailedReaction created 1
DefinedSet created 1
MarkerReference created 1
StableIdentifierHistory created 1
CellLineagePath created 1
FragmentInsertionModification created 1
_DeletedInstance created 1
Figure created 1
FragmentReplacedModification created 1
ReferenceRNASequence created 1
DatabaseObject created 1
NonsenseMutation created 1
ReferenceSequence created 1
Requirement created 1
Event created 1
Complex created 1
ReferenceGroup created 1
IntraChainCrosslinkedResidue created 1
ControlReference created 1
PathwayDiagram created 1
RetractionStatus created 1
ModifiedNucleotide created 1
GO_MolecularFunction created 1
FunctionalStatusType created 1
ReviewStatus created 1
Publication created 1
Cell created 1
_Deleted created 1
Pathway created 1
CrosslinkedResidue created 1
Polymerisation created 1
StableIdentifierReleaseStatus created 1
GroupModifiedResidue created 1
URL created 1
GO_CellularComponent created 1
CellDevelopmentStep created 1
ReferenceIsoform created 1
StableIdentifier created 1
BlackBoxEvent created 1
LiteratureReference created 1
ModifiedResidue created 1
GeneticallyModifiedResidue created 1
NegativeGeneExpressionRegulation created 1
Drug created 1
RegulationReference created 1
GenomeEncodedEntity created 1
Polymer created 1
ReactionType created 1
ReferenceDatabase created 1
EvidenceType created 1
_Release created 1
Taxon created 1
DeletedControlledVocabulary created 1
ReferenceEntity created 1
PositiveRegulation created 1
NegativeRegulation created 1
Depolymerisation created 1
NegativePrecedingEventReason created 1
NegativePrecedingEvent created 1
ReferenceGeneProduct created 1
EntitySet created 1
FragmentDeletionModification created 1
ChemicalDrug created 1
ReferenceDNASequence created 1
Affiliation created 1
PhysicalEntityCellType created 1
EntityFunctionalStatus created 1
ExternalOntology created 1
_UpdateTracker created 1
Person created 1
ReplacedResidue created 1
Disease created 1
ReferenceTherapeutic created 1
SimpleEntity created 1
Compartment created 1
ReactionlikeEvent created 1
PositiveGeneExpressionRegulation created 1
FragmentModification created 1
FrontPage created 1
PsiMod created 1
TranslationalModification created 1
DrugActionType created 1
ReferenceMolecule created 1
InterChainCrosslinkedResidue created 1
Species created 1
InteractionEvent created 1
FunctionalStatus created 1
OtherEntity created 1
Reaction created 1
ControlledVocabulary created 1
CandidateSet created 1
CellType created 1
EntityWithAccessionedSequence created 1
ProteinDrug created 1
PhysicalEntity created 1
Summation created 1
TranscriptionalModification created 1
DatabaseIdentifier created 1
Book created 1
InstanceEdit created 1
Regulation created 1
AbstractModifiedResidue created 1
GO_BiologicalProcess created 1
Anatomy created 1
CatalystActivity created 1
RNADrug created 1
CatalystActivityReference created 1
Complex reviewed +
Polymer reviewed +
GenomeEncodedEntity reviewed +
SimpleEntity reviewed +
ProteinDrug reviewed +
Event reviewed +
Drug reviewed +
PhysicalEntity reviewed +
RNADrug reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
InteractionEvent reviewed +
CellLineagePath reviewed +
Pathway reviewed +
Polymerisation reviewed +
EntitySet reviewed +
OtherEntity reviewed +
FailedReaction reviewed +
DefinedSet reviewed +
Cell reviewed +
CellDevelopmentStep reviewed +
BlackBoxEvent reviewed +
EntityWithAccessionedSequence reviewed +
Reaction reviewed +
ChemicalDrug reviewed +
CandidateSet reviewed +
RNADrug edited +
Depolymerisation edited +
ReactionlikeEvent edited +
Complex edited +
SimpleEntity edited +
Polymer edited +
GenomeEncodedEntity edited +
Event edited +
ProteinDrug edited +
PhysicalEntity edited +
Drug edited +
CellDevelopmentStep edited +
EntityWithAccessionedSequence edited +
BlackBoxEvent edited +
Reaction edited +
CandidateSet edited +
ChemicalDrug edited +
InteractionEvent edited +
CellLineagePath edited +
Pathway edited +
Polymerisation edited +
EntitySet edited +
OtherEntity edited +
DefinedSet edited +
FailedReaction edited +
Cell edited +
ReactionlikeEvent structureModified +
Reaction structureModified +
Depolymerisation structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
Event structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
Pathway structureModified +
EntitySet authored 1
Polymerisation authored +
OtherEntity authored 1
Pathway authored +
InteractionEvent authored +
CellLineagePath authored +
Cell authored 1
FailedReaction authored +
DefinedSet authored 1
BlackBoxEvent authored +
EntityWithAccessionedSequence authored 1
CellDevelopmentStep authored +
ChemicalDrug authored 1
CandidateSet authored 1
Reaction authored +
Polymer authored 1
GenomeEncodedEntity authored 1
SimpleEntity authored 1
Complex authored 1
Drug authored 1
PhysicalEntity authored 1
ProteinDrug authored 1
Event authored +
Depolymerisation authored +
RNADrug authored 1
ReactionlikeEvent authored +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
Event internalReviewed +
FailedReaction internalReviewed +
_Deleted replacementInstances +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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