Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
PsiMod modified +
ChemicalDrug modified +
GenomeEncodedEntity modified +
ControlledVocabulary modified +
PositiveRegulation modified +
ReactionlikeEvent modified +
SequenceOntology modified +
Species modified +
Complex modified +
ExternalOntology modified +
URL modified +
CandidateSet modified +
Cell modified +
GO_MolecularFunction modified +
EvidenceType modified +
EntityFunctionalStatus modified +
CatalystActivityReference modified +
PhysicalEntity modified +
AbstractModifiedResidue modified +
Drug modified +
RNADrug modified +
RegulationReference modified +
NegativePrecedingEvent modified +
DeletedControlledVocabulary modified +
GO_BiologicalProcess modified +
FragmentReplacedModification modified +
Reaction modified +
NegativePrecedingEventReason modified +
ReactionType modified +
_DeletedInstance modified +
FrontPage modified +
Requirement modified +
InteractionEvent modified +
ReferenceMolecule modified +
ReferenceGeneProduct modified +
Polymer modified +
ReferenceDatabase modified +
CellType modified +
ControlReference modified +
CellLineagePath modified +
CellDevelopmentStep modified +
SimpleEntity modified +
ReferenceIsoform modified +
ReferenceGroup modified +
FunctionalStatus modified +
Regulation modified +
Disease modified +
NegativeGeneExpressionRegulation modified +
ReferenceEntity modified +
ModifiedResidue modified +
DrugActionType modified +
ModifiedNucleotide modified +
_UpdateTracker modified +
Publication modified +
CatalystActivity modified +
GeneticallyModifiedResidue modified +
BlackBoxEvent modified +
ReferenceDNASequence modified +
DefinedSet modified +
InterChainCrosslinkedResidue modified +
PhysicalEntityCellType modified +
NegativeRegulation modified +
Person modified +
FragmentInsertionModification modified +
MarkerReference modified +
Anatomy modified +
StableIdentifier modified +
EntityWithAccessionedSequence modified +
FunctionalStatusType modified +
Polymerisation modified +
Pathway modified +
DatabaseIdentifier modified +
DatabaseObject modified +
NonsenseMutation modified +
PositiveGeneExpressionRegulation modified +
Figure modified +
StableIdentifierReleaseStatus modified +
ReviewStatus modified +
_Release modified +
ReplacedResidue modified +
Summation modified +
GroupModifiedResidue modified +
ReferenceTherapeutic modified +
_Deleted modified +
Depolymerisation modified +
CrosslinkedResidue modified +
ReferenceRNASequence modified +
Compartment modified +
Book modified +
Affiliation modified +
PathwayDiagram modified +
ReferenceSequence modified +
FragmentModification modified +
LiteratureReference modified +
RetractionStatus modified +
Event modified +
TranscriptionalModification modified +
EntitySet modified +
InstanceEdit modified +
TranslationalModification modified +
Taxon modified +
FragmentDeletionModification modified +
GO_CellularComponent modified +
IntraChainCrosslinkedResidue modified +
ProteinDrug modified +
OtherEntity modified +
FailedReaction modified +
StableIdentifierHistory modified +
InteractionEvent structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
Pathway structureModified +
BlackBoxEvent structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
CellDevelopmentStep structureModified +
CellLineagePath structureModified +
Event structureModified +
BlackBoxEvent internalReviewed +
Polymerisation internalReviewed +
Pathway internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
CellLineagePath internalReviewed +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
EntityWithAccessionedSequence revised +
InteractionEvent revised +
Cell revised +
CandidateSet revised +
EntitySet revised +
Polymer revised +
Pathway revised +
Polymerisation revised +
SimpleEntity revised +
OtherEntity revised +
FailedReaction revised +
ProteinDrug revised +
CellDevelopmentStep revised +
CellLineagePath revised +
PhysicalEntity revised +
RNADrug revised +
Depolymerisation revised +
Drug revised +
DefinedSet revised +
GenomeEncodedEntity revised +
BlackBoxEvent revised +
ChemicalDrug revised +
ReactionlikeEvent revised +
Reaction revised +
Event revised +
Complex revised +
Reaction edited +
ReactionlikeEvent edited +
Complex edited +
Event edited +
Depolymerisation edited +
Drug edited +
RNADrug edited +
ChemicalDrug edited +
BlackBoxEvent edited +
GenomeEncodedEntity edited +
DefinedSet edited +
CellDevelopmentStep edited +
CellLineagePath edited +
ProteinDrug edited +
SimpleEntity edited +
FailedReaction edited +
OtherEntity edited +
PhysicalEntity edited +
EntitySet edited +
Cell edited +
InteractionEvent edited +
CandidateSet edited +
EntityWithAccessionedSequence edited +
Polymer edited +
Polymerisation edited +
Pathway edited +
ChemicalDrug authored 1
BlackBoxEvent authored +
GenomeEncodedEntity authored 1
DefinedSet authored 1
Drug authored 1
Depolymerisation authored +
RNADrug authored 1
Event authored +
Complex authored 1
Reaction authored +
ReactionlikeEvent authored +
Polymerisation authored +
Polymer authored 1
Pathway authored +
EntitySet authored 1
InteractionEvent authored +
Cell authored 1
CandidateSet authored 1
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
CellDevelopmentStep authored +
CellLineagePath authored +
ProteinDrug authored 1
SimpleEntity authored 1
OtherEntity authored 1
FailedReaction authored +
Polymer reviewed +
Polymerisation reviewed +
Pathway reviewed +
EntitySet reviewed +
InteractionEvent reviewed +
CandidateSet reviewed +
Cell reviewed +
EntityWithAccessionedSequence reviewed +
PhysicalEntity reviewed +
CellLineagePath reviewed +
CellDevelopmentStep reviewed +
ProteinDrug reviewed +
OtherEntity reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
Drug reviewed +
Depolymerisation reviewed +
RNADrug reviewed +
Event reviewed +
Complex reviewed +
Reaction reviewed +
ReactionlikeEvent reviewed +
FailedReaction created 1
OtherEntity created 1
ProteinDrug created 1
IntraChainCrosslinkedResidue created 1
StableIdentifierHistory created 1
InstanceEdit created 1
EntitySet created 1
GO_CellularComponent created 1
FragmentDeletionModification created 1
Taxon created 1
TranslationalModification created 1
LiteratureReference created 1
RetractionStatus created 1
FragmentModification created 1
ReferenceSequence created 1
PathwayDiagram created 1
TranscriptionalModification created 1
Event created 1
ReferenceRNASequence created 1
CrosslinkedResidue created 1
Compartment created 1
Depolymerisation created 1
Affiliation created 1
Book created 1
ReviewStatus created 1
StableIdentifierReleaseStatus created 1
Figure created 1
PositiveGeneExpressionRegulation created 1
_Deleted created 1
GroupModifiedResidue created 1
ReplacedResidue created 1
Summation created 1
ReferenceTherapeutic created 1
_Release created 1
EntityWithAccessionedSequence created 1
StableIdentifier created 1
NonsenseMutation created 1
DatabaseIdentifier created 1
DatabaseObject created 1
Pathway created 1
Polymerisation created 1
FunctionalStatusType created 1
PhysicalEntityCellType created 1
InterChainCrosslinkedResidue created 1
Anatomy created 1
MarkerReference created 1
FragmentInsertionModification created 1
Person created 1
NegativeRegulation created 1
GeneticallyModifiedResidue created 1
Publication created 1
CatalystActivity created 1
_UpdateTracker created 1
ModifiedNucleotide created 1
DrugActionType created 1
DefinedSet created 1
ReferenceDNASequence created 1
BlackBoxEvent created 1
ReferenceIsoform created 1
ReferenceGroup created 1
SimpleEntity created 1
CellDevelopmentStep created 1
CellLineagePath created 1
ControlReference created 1
ModifiedResidue created 1
ReferenceEntity created 1
NegativeGeneExpressionRegulation created 1
Disease created 1
FunctionalStatus created 1
Regulation created 1
ReferenceMolecule created 1
ReferenceGeneProduct created 1
InteractionEvent created 1
ReferenceDatabase created 1
CellType created 1
Polymer created 1
Reaction created 1
FragmentReplacedModification created 1
FrontPage created 1
Requirement created 1
_DeletedInstance created 1
ReactionType created 1
NegativePrecedingEventReason created 1
RegulationReference created 1
RNADrug created 1
Drug created 1
DeletedControlledVocabulary created 1
GO_BiologicalProcess created 1
NegativePrecedingEvent created 1
CatalystActivityReference created 1
AbstractModifiedResidue created 1
PhysicalEntity created 1
EvidenceType created 1
GO_MolecularFunction created 1
CandidateSet created 1
Cell created 1
URL created 1
EntityFunctionalStatus created 1
ReactionlikeEvent created 1
PositiveRegulation created 1
ExternalOntology created 1
SequenceOntology created 1
Species created 1
Complex created 1
PsiMod created 1
ControlledVocabulary created 1
GenomeEncodedEntity created 1
ChemicalDrug created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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