Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Pathway structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
FailedReaction structureModified +
CellDevelopmentStep structureModified +
Reaction structureModified +
Depolymerisation structureModified +
Event structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
Polymerisation internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
DefinedSet reviewed +
ChemicalDrug reviewed +
Polymer reviewed +
CellLineagePath reviewed +
CandidateSet reviewed +
SimpleEntity reviewed +
Pathway reviewed +
Polymerisation reviewed +
FailedReaction reviewed +
OtherEntity reviewed +
InteractionEvent reviewed +
Depolymerisation reviewed +
RNADrug reviewed +
ProteinDrug reviewed +
BlackBoxEvent reviewed +
Complex reviewed +
Cell reviewed +
Drug reviewed +
ReactionlikeEvent reviewed +
PhysicalEntity reviewed +
EntityWithAccessionedSequence reviewed +
Reaction reviewed +
Event reviewed +
CellDevelopmentStep reviewed +
EntitySet reviewed +
GenomeEncodedEntity reviewed +
Polymer authored 1
CandidateSet authored 1
CellLineagePath authored +
DefinedSet authored 1
ChemicalDrug authored 1
Depolymerisation authored +
RNADrug authored 1
ProteinDrug authored 1
Complex authored 1
BlackBoxEvent authored +
SimpleEntity authored 1
Pathway authored +
Polymerisation authored +
FailedReaction authored +
InteractionEvent authored +
OtherEntity authored 1
PhysicalEntity authored 1
EntityWithAccessionedSequence authored 1
Cell authored 1
Drug authored 1
ReactionlikeEvent authored +
Event authored +
Reaction authored +
CellDevelopmentStep authored +
EntitySet authored 1
GenomeEncodedEntity authored 1
CellDevelopmentStep modified +
FunctionalStatus modified +
EntityFunctionalStatus modified +
ControlReference modified +
PsiMod modified +
GroupModifiedResidue modified +
CellType modified +
Species modified +
Compartment modified +
IntraChainCrosslinkedResidue modified +
EvidenceType modified +
Drug modified +
Cell modified +
BlackBoxEvent modified +
RNADrug modified +
PathwayDiagram modified +
InteractionEvent modified +
OtherEntity modified +
FailedReaction modified +
_UpdateTracker modified +
ControlledVocabulary modified +
ReferenceGroup modified +
Polymer modified +
DatabaseIdentifier modified +
ReferenceEntity modified +
ChemicalDrug modified +
Requirement modified +
Regulation modified +
Event modified +
Reaction modified +
CrosslinkedResidue modified +
SequenceOntology modified +
CatalystActivity modified +
RetractionStatus modified +
Anatomy modified +
ReactionType modified +
ReactionlikeEvent modified +
DeletedControlledVocabulary modified +
GO_BiologicalProcess modified +
DrugActionType modified +
ExternalOntology modified +
ProteinDrug modified +
StableIdentifierHistory modified +
Taxon modified +
Affiliation modified +
ReferenceDNASequence modified +
_Release modified +
PositiveRegulation modified +
CandidateSet modified +
CellLineagePath modified +
TranscriptionalModification modified +
PositiveGeneExpressionRegulation modified +
EntitySet modified +
StableIdentifierReleaseStatus modified +
NegativeRegulation modified +
NegativePrecedingEvent modified +
DatabaseObject modified +
EntityWithAccessionedSequence modified +
NonsenseMutation modified +
FragmentInsertionModification modified +
PhysicalEntity modified +
InstanceEdit modified +
ReferenceGeneProduct modified +
TranslationalModification modified +
NegativeGeneExpressionRegulation modified +
Book modified +
Person modified +
_DeletedInstance modified +
ReplacedResidue modified +
Depolymerisation modified +
ModifiedResidue modified +
Figure modified +
GeneticallyModifiedResidue modified +
DefinedSet modified +
PhysicalEntityCellType modified +
FragmentModification modified +
GO_CellularComponent modified +
GenomeEncodedEntity modified +
ReferenceDatabase modified +
ReferenceTherapeutic modified +
ReferenceSequence modified +
GO_MolecularFunction modified +
ReferenceRNASequence modified +
CatalystActivityReference modified +
ModifiedNucleotide modified +
ReviewStatus modified +
NegativePrecedingEventReason modified +
FragmentReplacedModification modified +
InterChainCrosslinkedResidue modified +
LiteratureReference modified +
Complex modified +
Disease modified +
FrontPage modified +
ReferenceIsoform modified +
StableIdentifier modified +
ReferenceMolecule modified +
Polymerisation modified +
SimpleEntity modified +
Pathway modified +
URL modified +
MarkerReference modified +
_Deleted modified +
RegulationReference modified +
FragmentDeletionModification modified +
Publication modified +
AbstractModifiedResidue modified +
FunctionalStatusType modified +
Summation modified +
Polymer edited +
CellLineagePath edited +
CandidateSet edited +
ChemicalDrug edited +
DefinedSet edited +
Depolymerisation edited +
Complex edited +
BlackBoxEvent edited +
RNADrug edited +
ProteinDrug edited +
SimpleEntity edited +
Pathway edited +
InteractionEvent edited +
OtherEntity edited +
Polymerisation edited +
FailedReaction edited +
EntityWithAccessionedSequence edited +
PhysicalEntity edited +
Cell edited +
Drug edited +
ReactionlikeEvent edited +
CellDevelopmentStep edited +
Reaction edited +
Event edited +
EntitySet edited +
GenomeEncodedEntity edited +
Depolymerisation revised +
RNADrug revised +
ProteinDrug revised +
Complex revised +
BlackBoxEvent revised +
SimpleEntity revised +
Pathway revised +
FailedReaction revised +
Polymerisation revised +
OtherEntity revised +
InteractionEvent revised +
Polymer revised +
CellLineagePath revised +
CandidateSet revised +
DefinedSet revised +
ChemicalDrug revised +
Reaction revised +
Event revised +
CellDevelopmentStep revised +
GenomeEncodedEntity revised +
EntitySet revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
Cell revised +
Drug revised +
ReactionlikeEvent revised +
_Deleted replacementInstances +
ReferenceRNASequence created 1
GO_MolecularFunction created 1
CatalystActivityReference created 1
ModifiedNucleotide created 1
ReviewStatus created 1
GenomeEncodedEntity created 1
ReferenceTherapeutic created 1
ReferenceDatabase created 1
ReferenceSequence created 1
LiteratureReference created 1
InterChainCrosslinkedResidue created 1
NegativePrecedingEventReason created 1
FragmentReplacedModification created 1
ReferenceIsoform created 1
StableIdentifier created 1
ReferenceMolecule created 1
Polymerisation created 1
Pathway created 1
SimpleEntity created 1
MarkerReference created 1
URL created 1
Complex created 1
FrontPage created 1
Disease created 1
Publication created 1
AbstractModifiedResidue created 1
FunctionalStatusType created 1
Summation created 1
_Deleted created 1
RegulationReference created 1
FragmentDeletionModification created 1
DatabaseObject created 1
EntitySet created 1
NegativePrecedingEvent created 1
NegativeRegulation created 1
StableIdentifierReleaseStatus created 1
NegativeGeneExpressionRegulation created 1
Book created 1
EntityWithAccessionedSequence created 1
FragmentInsertionModification created 1
NonsenseMutation created 1
PhysicalEntity created 1
InstanceEdit created 1
ReferenceGeneProduct created 1
TranslationalModification created 1
Person created 1
_DeletedInstance created 1
ReplacedResidue created 1
Depolymerisation created 1
ModifiedResidue created 1
GeneticallyModifiedResidue created 1
FragmentModification created 1
PhysicalEntityCellType created 1
GO_CellularComponent created 1
DefinedSet created 1
Figure created 1
SequenceOntology created 1
Requirement created 1
Regulation created 1
Reaction created 1
CrosslinkedResidue created 1
Event created 1
ReactionType created 1
ReactionlikeEvent created 1
DeletedControlledVocabulary created 1
GO_BiologicalProcess created 1
RetractionStatus created 1
CatalystActivity created 1
Anatomy created 1
Affiliation created 1
Taxon created 1
ReferenceDNASequence created 1
DrugActionType created 1
ExternalOntology created 1
ProteinDrug created 1
StableIdentifierHistory created 1
PositiveGeneExpressionRegulation created 1
PositiveRegulation created 1
_Release created 1
CandidateSet created 1
CellLineagePath created 1
TranscriptionalModification created 1
FunctionalStatus created 1
ControlReference created 1
EntityFunctionalStatus created 1
CellDevelopmentStep created 1
IntraChainCrosslinkedResidue created 1
EvidenceType created 1
Drug created 1
Cell created 1
GroupModifiedResidue created 1
PsiMod created 1
CellType created 1
Species created 1
Compartment created 1
PathwayDiagram created 1
InteractionEvent created 1
OtherEntity created 1
FailedReaction created 1
_UpdateTracker created 1
BlackBoxEvent created 1
RNADrug created 1
DatabaseIdentifier created 1
ReferenceEntity created 1
ChemicalDrug created 1
ControlledVocabulary created 1
ReferenceGroup created 1
Polymer created 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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