Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Reaction authored +
Cell authored 1
PhysicalEntity authored 1
OtherEntity authored 1
FailedReaction authored +
EntityWithAccessionedSequence authored 1
EntitySet authored 1
SimpleEntity authored 1
CellDevelopmentStep authored +
Event authored +
Complex authored 1
RNADrug authored 1
GenomeEncodedEntity authored 1
Depolymerisation authored +
ChemicalDrug authored 1
Polymerisation authored +
Pathway authored +
ProteinDrug authored 1
CandidateSet authored 1
BlackBoxEvent authored +
DefinedSet authored 1
ReactionlikeEvent authored +
Polymer authored 1
CellLineagePath authored +
InteractionEvent authored +
Drug authored 1
DefinedSet edited +
ProteinDrug edited +
Pathway edited +
BlackBoxEvent edited +
CandidateSet edited +
Depolymerisation edited +
Polymerisation edited +
ChemicalDrug edited +
RNADrug edited +
Complex edited +
GenomeEncodedEntity edited +
Drug edited +
CellLineagePath edited +
InteractionEvent edited +
ReactionlikeEvent edited +
Polymer edited +
Cell edited +
Reaction edited +
SimpleEntity edited +
Event edited +
CellDevelopmentStep edited +
EntitySet edited +
EntityWithAccessionedSequence edited +
PhysicalEntity edited +
OtherEntity edited +
FailedReaction edited +
NegativeGeneExpressionRegulation created 1
Drug created 1
ModifiedResidue created 1
ReactionlikeEvent created 1
Polymer created 1
PhysicalEntityCellType created 1
ControlledVocabulary created 1
BlackBoxEvent created 1
DeletedControlledVocabulary created 1
AbstractModifiedResidue created 1
Complex created 1
Publication created 1
DatabaseIdentifier created 1
Species created 1
ReplacedResidue created 1
StableIdentifierReleaseStatus created 1
RetractionStatus created 1
ChemicalDrug created 1
TranslationalModification created 1
EntityWithAccessionedSequence created 1
EvidenceType created 1
NegativePrecedingEvent created 1
PhysicalEntity created 1
GeneticallyModifiedResidue created 1
PositiveRegulation created 1
OtherEntity created 1
ReferenceMolecule created 1
ReferenceIsoform created 1
Regulation created 1
PsiMod created 1
InteractionEvent created 1
FunctionalStatusType created 1
InterChainCrosslinkedResidue created 1
FrontPage created 1
PositiveGeneExpressionRegulation created 1
_Release created 1
CandidateSet created 1
_Deleted created 1
GO_CellularComponent created 1
RNADrug created 1
FragmentModification created 1
Disease created 1
GO_BiologicalProcess created 1
Depolymerisation created 1
IntraChainCrosslinkedResidue created 1
PathwayDiagram created 1
SimpleEntity created 1
ReferenceTherapeutic created 1
ReferenceEntity created 1
StableIdentifier created 1
Figure created 1
Cell created 1
ReferenceDNASequence created 1
CatalystActivity created 1
ReferenceRNASequence created 1
Reaction created 1
ReviewStatus created 1
CellLineagePath created 1
FragmentReplacedModification created 1
Requirement created 1
NegativeRegulation created 1
Person created 1
ReferenceGeneProduct created 1
Summation created 1
Affiliation created 1
DatabaseObject created 1
Pathway created 1
MarkerReference created 1
ProteinDrug created 1
DefinedSet created 1
ExternalOntology created 1
CellType created 1
GenomeEncodedEntity created 1
Polymerisation created 1
Book created 1
EntitySet created 1
Compartment created 1
CellDevelopmentStep created 1
URL created 1
StableIdentifierHistory created 1
DrugActionType created 1
CatalystActivityReference created 1
FragmentInsertionModification created 1
ModifiedNucleotide created 1
GO_MolecularFunction created 1
LiteratureReference created 1
RegulationReference created 1
NegativePrecedingEventReason created 1
ReactionType created 1
FragmentDeletionModification created 1
Anatomy created 1
_UpdateTracker created 1
SequenceOntology created 1
NonsenseMutation created 1
CrosslinkedResidue created 1
Taxon created 1
ReferenceGroup created 1
ControlReference created 1
Event created 1
ReferenceDatabase created 1
InstanceEdit created 1
_DeletedInstance created 1
FailedReaction created 1
TranscriptionalModification created 1
FunctionalStatus created 1
ReferenceSequence created 1
GroupModifiedResidue created 1
EntityFunctionalStatus created 1
_Deleted replacementInstances +
BlackBoxEvent internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +
Depolymerisation internalReviewed +
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
Event internalReviewed +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
CellDevelopmentStep structureModified +
Event structureModified +
CellLineagePath structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
ReactionlikeEvent structureModified +
BlackBoxEvent structureModified +
Pathway structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
Reaction structureModified +
Event modified +
ReferenceDatabase modified +
InstanceEdit modified +
_DeletedInstance modified +
FailedReaction modified +
FunctionalStatus modified +
TranscriptionalModification modified +
EntityFunctionalStatus modified +
ReferenceSequence modified +
GroupModifiedResidue modified +
FragmentDeletionModification modified +
Anatomy modified +
_UpdateTracker modified +
SequenceOntology modified +
NonsenseMutation modified +
CrosslinkedResidue modified +
ReferenceGroup modified +
Taxon modified +
ControlReference modified +
Compartment modified +
CellDevelopmentStep modified +
EntitySet modified +
Book modified +
StableIdentifierHistory modified +
URL modified +
DrugActionType modified +
LiteratureReference modified +
GO_MolecularFunction modified +
RegulationReference modified +
FragmentInsertionModification modified +
ModifiedNucleotide modified +
CatalystActivityReference modified +
NegativePrecedingEventReason modified +
ReactionType modified +
Requirement modified +
NegativeRegulation modified +
Person modified +
FragmentReplacedModification modified +
CellLineagePath modified +
Affiliation modified +
DatabaseObject modified +
ReferenceGeneProduct modified +
Summation modified +
DefinedSet modified +
ExternalOntology modified +
MarkerReference modified +
ProteinDrug modified +
Pathway modified +
Polymerisation modified +
GenomeEncodedEntity modified +
CellType modified +
SimpleEntity modified +
PathwayDiagram modified +
ReferenceTherapeutic modified +
Cell modified +
Figure modified +
ReferenceDNASequence modified +
CatalystActivity modified +
StableIdentifier modified +
ReferenceEntity modified +
ReviewStatus modified +
Reaction modified +
ReferenceRNASequence modified +
FrontPage modified +
InteractionEvent modified +
PsiMod modified +
InterChainCrosslinkedResidue modified +
FunctionalStatusType modified +
PositiveGeneExpressionRegulation modified +
_Deleted modified +
GO_CellularComponent modified +
_Release modified +
CandidateSet modified +
FragmentModification modified +
Disease modified +
Depolymerisation modified +
IntraChainCrosslinkedResidue modified +
GO_BiologicalProcess modified +
RNADrug modified +
TranslationalModification modified +
EntityWithAccessionedSequence modified +
PhysicalEntity modified +
PositiveRegulation modified +
GeneticallyModifiedResidue modified +
OtherEntity modified +
EvidenceType modified +
NegativePrecedingEvent modified +
ReferenceMolecule modified +
Regulation modified +
ReferenceIsoform modified +
NegativeGeneExpressionRegulation modified +
Drug modified +
ReactionlikeEvent modified +
ModifiedResidue modified +
Polymer modified +
DeletedControlledVocabulary modified +
PhysicalEntityCellType modified +
BlackBoxEvent modified +
ControlledVocabulary modified +
Species modified +
DatabaseIdentifier modified +
ReplacedResidue modified +
RetractionStatus modified +
StableIdentifierReleaseStatus modified +
ChemicalDrug modified +
Complex modified +
AbstractModifiedResidue modified +
Publication modified +
ChemicalDrug reviewed +
Depolymerisation reviewed +
Polymerisation reviewed +
Complex reviewed +
RNADrug reviewed +
GenomeEncodedEntity reviewed +
DefinedSet reviewed +
Pathway reviewed +
ProteinDrug reviewed +
BlackBoxEvent reviewed +
CandidateSet reviewed +
ReactionlikeEvent reviewed +
Polymer reviewed +
Drug reviewed +
InteractionEvent reviewed +
CellLineagePath reviewed +
Reaction reviewed +
Cell reviewed +
PhysicalEntity reviewed +
OtherEntity reviewed +
FailedReaction reviewed +
SimpleEntity reviewed +
Event reviewed +
CellDevelopmentStep reviewed +
EntitySet reviewed +
EntityWithAccessionedSequence reviewed +
OtherEntity revised +
FailedReaction revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
EntitySet revised +
CellDevelopmentStep revised +
Event revised +
SimpleEntity revised +
Reaction revised +
Cell revised +
Polymer revised +
ReactionlikeEvent revised +
InteractionEvent revised +
CellLineagePath revised +
Drug revised +
GenomeEncodedEntity revised +
RNADrug revised +
Complex revised +
Depolymerisation revised +
Polymerisation revised +
ChemicalDrug revised +
CandidateSet revised +
BlackBoxEvent revised +
Pathway revised +
ProteinDrug revised +
DefinedSet revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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