Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
BlackBoxEvent revised +
EntityWithAccessionedSequence revised +
InteractionEvent revised +
Polymerisation revised +
PhysicalEntity revised +
ProteinDrug revised +
Event revised +
Drug revised +
ReactionlikeEvent revised +
GenomeEncodedEntity revised +
Complex revised +
FailedReaction revised +
RNADrug revised +
DefinedSet revised +
CellLineagePath revised +
CandidateSet revised +
EntitySet revised +
ChemicalDrug revised +
OtherEntity revised +
CellDevelopmentStep revised +
Cell revised +
Depolymerisation revised +
Reaction revised +
Pathway revised +
SimpleEntity revised +
Polymer revised +
CandidateSet edited +
EntitySet edited +
CellDevelopmentStep edited +
Cell edited +
ChemicalDrug edited +
OtherEntity edited +
Depolymerisation edited +
Reaction edited +
SimpleEntity edited +
Polymer edited +
Pathway edited +
EntityWithAccessionedSequence edited +
InteractionEvent edited +
BlackBoxEvent edited +
ProteinDrug edited +
Polymerisation edited +
PhysicalEntity edited +
GenomeEncodedEntity edited +
Complex edited +
Event edited +
Drug edited +
ReactionlikeEvent edited +
DefinedSet edited +
CellLineagePath edited +
FailedReaction edited +
RNADrug edited +
Cell reviewed +
CellDevelopmentStep reviewed +
ChemicalDrug reviewed +
OtherEntity reviewed +
EntitySet reviewed +
CandidateSet reviewed +
Polymer reviewed +
SimpleEntity reviewed +
Pathway reviewed +
Reaction reviewed +
Depolymerisation reviewed +
ProteinDrug reviewed +
Polymerisation reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
EntityWithAccessionedSequence reviewed +
BlackBoxEvent reviewed +
CellLineagePath reviewed +
DefinedSet reviewed +
RNADrug reviewed +
FailedReaction reviewed +
Complex reviewed +
GenomeEncodedEntity reviewed +
ReactionlikeEvent reviewed +
Drug reviewed +
Event reviewed +
Complex created 1
Requirement created 1
ReactionlikeEvent created 1
DrugActionType created 1
CatalystActivityReference created 1
StableIdentifier created 1
_UpdateTracker created 1
Book created 1
AbstractModifiedResidue created 1
DatabaseObject created 1
RegulationReference created 1
GO_MolecularFunction created 1
NegativePrecedingEvent created 1
MarkerReference created 1
PsiMod created 1
Depolymerisation created 1
FragmentReplacedModification created 1
FragmentDeletionModification created 1
SimpleEntity created 1
Pathway created 1
GO_BiologicalProcess created 1
DatabaseIdentifier created 1
ReferenceMolecule created 1
GroupModifiedResidue created 1
Cell created 1
CellDevelopmentStep created 1
ChemicalDrug created 1
TranslationalModification created 1
FragmentInsertionModification created 1
EvidenceType created 1
Publication created 1
CellLineagePath created 1
FunctionalStatus created 1
Taxon created 1
EntityFunctionalStatus created 1
FunctionalStatusType created 1
EntityWithAccessionedSequence created 1
ProteinDrug created 1
Disease created 1
Summation created 1
ExternalOntology created 1
ControlReference created 1
URL created 1
FragmentModification created 1
Polymer created 1
LiteratureReference created 1
NegativeGeneExpressionRegulation created 1
Species created 1
Regulation created 1
CatalystActivity created 1
_Deleted created 1
PositiveRegulation created 1
GenomeEncodedEntity created 1
Drug created 1
Event created 1
FrontPage created 1
IntraChainCrosslinkedResidue created 1
RNADrug created 1
ReferenceGeneProduct created 1
ReferenceTherapeutic created 1
CellType created 1
BlackBoxEvent created 1
ControlledVocabulary created 1
Polymerisation created 1
ReferenceDatabase created 1
NegativePrecedingEventReason created 1
ModifiedResidue created 1
_Release created 1
ReactionType created 1
Anatomy created 1
CandidateSet created 1
ReferenceDNASequence created 1
ReferenceEntity created 1
_DeletedInstance created 1
InterChainCrosslinkedResidue created 1
ReplacedResidue created 1
ReferenceGroup created 1
ReferenceRNASequence created 1
OtherEntity created 1
PathwayDiagram created 1
StableIdentifierHistory created 1
CrosslinkedResidue created 1
GeneticallyModifiedResidue created 1
Person created 1
DefinedSet created 1
TranscriptionalModification created 1
DeletedControlledVocabulary created 1
FailedReaction created 1
PhysicalEntityCellType created 1
StableIdentifierReleaseStatus created 1
InteractionEvent created 1
Figure created 1
PositiveGeneExpressionRegulation created 1
RetractionStatus created 1
ReferenceSequence created 1
PhysicalEntity created 1
NegativeRegulation created 1
Compartment created 1
Reaction created 1
ReviewStatus created 1
InstanceEdit created 1
NonsenseMutation created 1
EntitySet created 1
GO_CellularComponent created 1
ReferenceIsoform created 1
ModifiedNucleotide created 1
SequenceOntology created 1
Affiliation created 1
ReactionlikeEvent modified +
Requirement modified +
Complex modified +
StableIdentifier modified +
CatalystActivityReference modified +
DrugActionType modified +
AbstractModifiedResidue modified +
Book modified +
_UpdateTracker modified +
NegativePrecedingEvent modified +
MarkerReference modified +
RegulationReference modified +
GO_MolecularFunction modified +
DatabaseObject modified +
Depolymerisation modified +
PsiMod modified +
GO_BiologicalProcess modified +
DatabaseIdentifier modified +
Pathway modified +
FragmentDeletionModification modified +
SimpleEntity modified +
FragmentReplacedModification modified +
GroupModifiedResidue modified +
ReferenceMolecule modified +
ChemicalDrug modified +
CellDevelopmentStep modified +
Cell modified +
FragmentInsertionModification modified +
TranslationalModification modified +
EvidenceType modified +
Taxon modified +
EntityFunctionalStatus modified +
FunctionalStatus modified +
CellLineagePath modified +
Publication modified +
EntityWithAccessionedSequence modified +
FunctionalStatusType modified +
Disease modified +
ProteinDrug modified +
ControlReference modified +
URL modified +
FragmentModification modified +
ExternalOntology modified +
Summation modified +
NegativeGeneExpressionRegulation modified +
LiteratureReference modified +
Polymer modified +
Species modified +
CatalystActivity modified +
Regulation modified +
Event modified +
Drug modified +
GenomeEncodedEntity modified +
_Deleted modified +
PositiveRegulation modified +
RNADrug modified +
IntraChainCrosslinkedResidue modified +
FrontPage modified +
BlackBoxEvent modified +
CellType modified +
ReferenceTherapeutic modified +
ReferenceGeneProduct modified +
Polymerisation modified +
ControlledVocabulary modified +
ReferenceDatabase modified +
_Release modified +
NegativePrecedingEventReason modified +
ModifiedResidue modified +
_DeletedInstance modified +
ReferenceDNASequence modified +
ReferenceEntity modified +
Anatomy modified +
CandidateSet modified +
ReactionType modified +
PathwayDiagram modified +
OtherEntity modified +
ReferenceGroup modified +
ReferenceRNASequence modified +
ReplacedResidue modified +
InterChainCrosslinkedResidue modified +
GeneticallyModifiedResidue modified +
CrosslinkedResidue modified +
StableIdentifierHistory modified +
FailedReaction modified +
PhysicalEntityCellType modified +
StableIdentifierReleaseStatus modified +
DeletedControlledVocabulary modified +
TranscriptionalModification modified +
DefinedSet modified +
Person modified +
Figure modified +
InteractionEvent modified +
PhysicalEntity modified +
NegativeRegulation modified +
ReferenceSequence modified +
PositiveGeneExpressionRegulation modified +
RetractionStatus modified +
Reaction modified +
Compartment modified +
NonsenseMutation modified +
InstanceEdit modified +
ReviewStatus modified +
ReferenceIsoform modified +
GO_CellularComponent modified +
EntitySet modified +
Affiliation modified +
SequenceOntology modified +
ModifiedNucleotide modified +
Depolymerisation authored +
Reaction authored +
SimpleEntity authored 1
Polymer authored 1
Pathway authored +
CandidateSet authored 1
EntitySet authored 1
CellDevelopmentStep authored +
Cell authored 1
ChemicalDrug authored 1
OtherEntity authored 1
GenomeEncodedEntity authored 1
Complex authored 1
Event authored +
Drug authored 1
ReactionlikeEvent authored +
DefinedSet authored 1
CellLineagePath authored +
FailedReaction authored +
RNADrug authored 1
EntityWithAccessionedSequence authored 1
InteractionEvent authored +
BlackBoxEvent authored +
ProteinDrug authored 1
PhysicalEntity authored 1
Polymerisation authored +
FailedReaction internalReviewed +
Pathway internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
Reaction structureModified +
Event structureModified +
Depolymerisation structureModified +
Pathway structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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