Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ChemicalDrug created 1
PositiveRegulation created 1
PsiMod created 1
CellType created 1
NegativePrecedingEventReason created 1
Book created 1
ControlledVocabulary created 1
Reaction created 1
PathwayDiagram created 1
NegativeGeneExpressionRegulation created 1
Requirement created 1
DrugActionType created 1
ReviewStatus created 1
ReferenceDNASequence created 1
FrontPage created 1
CellLineagePath created 1
_UpdateTracker created 1
Pathway created 1
Anatomy created 1
RetractionStatus created 1
FunctionalStatusType created 1
Publication created 1
Person created 1
ReferenceSequence created 1
TranscriptionalModification created 1
Depolymerisation created 1
ReferenceGroup created 1
Summation created 1
EntityFunctionalStatus created 1
PositiveGeneExpressionRegulation created 1
ReferenceMolecule created 1
GO_BiologicalProcess created 1
Compartment created 1
ReferenceIsoform created 1
IntraChainCrosslinkedResidue created 1
TranslationalModification created 1
_DeletedInstance created 1
FragmentDeletionModification created 1
ModifiedNucleotide created 1
GO_MolecularFunction created 1
DatabaseObject created 1
FailedReaction created 1
_Release created 1
ExternalOntology created 1
ReplacedResidue created 1
ReferenceDatabase created 1
Polymer created 1
FragmentReplacedModification created 1
Polymerisation created 1
GenomeEncodedEntity created 1
RegulationReference created 1
ReferenceRNASequence created 1
URL created 1
GeneticallyModifiedResidue created 1
ReferenceTherapeutic created 1
Regulation created 1
SimpleEntity created 1
InstanceEdit created 1
BlackBoxEvent created 1
EvidenceType created 1
PhysicalEntityCellType created 1
NonsenseMutation created 1
CandidateSet created 1
Drug created 1
ModifiedResidue created 1
CrosslinkedResidue created 1
Taxon created 1
CatalystActivity created 1
InteractionEvent created 1
DefinedSet created 1
NegativePrecedingEvent created 1
MarkerReference created 1
NegativeRegulation created 1
GroupModifiedResidue created 1
Species created 1
AbstractModifiedResidue created 1
StableIdentifierReleaseStatus created 1
DatabaseIdentifier created 1
EntitySet created 1
LiteratureReference created 1
FunctionalStatus created 1
CellDevelopmentStep created 1
InterChainCrosslinkedResidue created 1
Cell created 1
StableIdentifierHistory created 1
FragmentModification created 1
OtherEntity created 1
GO_CellularComponent created 1
ReactionType created 1
CatalystActivityReference created 1
Figure created 1
ReferenceEntity created 1
FragmentInsertionModification created 1
_Deleted created 1
Disease created 1
ProteinDrug created 1
DeletedControlledVocabulary created 1
Event created 1
ReferenceGeneProduct created 1
Complex created 1
StableIdentifier created 1
EntityWithAccessionedSequence created 1
PhysicalEntity created 1
ReactionlikeEvent created 1
Affiliation created 1
ControlReference created 1
SequenceOntology created 1
RNADrug created 1
Pathway structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
Event structureModified +
Reaction structureModified +
Polymerisation structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
Polymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
Reaction internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
Reaction revised +
OtherEntity revised +
Drug revised +
CandidateSet revised +
CellDevelopmentStep revised +
BlackBoxEvent revised +
ChemicalDrug revised +
SimpleEntity revised +
Cell revised +
FailedReaction revised +
CellLineagePath revised +
Pathway revised +
Polymer revised +
InteractionEvent revised +
DefinedSet revised +
ProteinDrug revised +
GenomeEncodedEntity revised +
Event revised +
EntitySet revised +
Polymerisation revised +
RNADrug revised +
Complex revised +
EntityWithAccessionedSequence revised +
PhysicalEntity revised +
ReactionlikeEvent revised +
Depolymerisation revised +
PhysicalEntity reviewed +
Depolymerisation reviewed +
ReactionlikeEvent reviewed +
Complex reviewed +
EntityWithAccessionedSequence reviewed +
RNADrug reviewed +
Polymerisation reviewed +
Event reviewed +
EntitySet reviewed +
ProteinDrug reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
DefinedSet reviewed +
Pathway reviewed +
Polymer reviewed +
FailedReaction reviewed +
CellLineagePath reviewed +
Cell reviewed +
CellDevelopmentStep reviewed +
ChemicalDrug reviewed +
BlackBoxEvent reviewed +
SimpleEntity reviewed +
Reaction reviewed +
OtherEntity reviewed +
CandidateSet reviewed +
Drug reviewed +
_Deleted replacementInstances +
RNADrug modified +
SequenceOntology modified +
ControlReference modified +
Affiliation modified +
ReactionlikeEvent modified +
PhysicalEntity modified +
EntityWithAccessionedSequence modified +
StableIdentifier modified +
Complex modified +
ReferenceGeneProduct modified +
Event modified +
DeletedControlledVocabulary modified +
ProteinDrug modified +
Disease modified +
_Deleted modified +
FragmentInsertionModification modified +
ReferenceEntity modified +
CatalystActivityReference modified +
Figure modified +
ReactionType modified +
GO_CellularComponent modified +
FragmentModification modified +
OtherEntity modified +
StableIdentifierHistory modified +
Cell modified +
InterChainCrosslinkedResidue modified +
CellDevelopmentStep modified +
FunctionalStatus modified +
LiteratureReference modified +
DatabaseIdentifier modified +
EntitySet modified +
StableIdentifierReleaseStatus modified +
AbstractModifiedResidue modified +
GroupModifiedResidue modified +
Species modified +
NegativeRegulation modified +
MarkerReference modified +
NegativePrecedingEvent modified +
InteractionEvent modified +
DefinedSet modified +
CrosslinkedResidue modified +
Taxon modified +
CatalystActivity modified +
ModifiedResidue modified +
CandidateSet modified +
Drug modified +
NonsenseMutation modified +
PhysicalEntityCellType modified +
EvidenceType modified +
BlackBoxEvent modified +
InstanceEdit modified +
SimpleEntity modified +
Regulation modified +
ReferenceTherapeutic modified +
GeneticallyModifiedResidue modified +
URL modified +
ReferenceRNASequence modified +
RegulationReference modified +
GenomeEncodedEntity modified +
Polymerisation modified +
FragmentReplacedModification modified +
ReplacedResidue modified +
Polymer modified +
ReferenceDatabase modified +
ExternalOntology modified +
_Release modified +
FailedReaction modified +
DatabaseObject modified +
GO_MolecularFunction modified +
ModifiedNucleotide modified +
_DeletedInstance modified +
FragmentDeletionModification modified +
TranslationalModification modified +
ReferenceIsoform modified +
IntraChainCrosslinkedResidue modified +
Compartment modified +
GO_BiologicalProcess modified +
ReferenceMolecule modified +
PositiveGeneExpressionRegulation modified +
EntityFunctionalStatus modified +
Summation modified +
Depolymerisation modified +
ReferenceGroup modified +
TranscriptionalModification modified +
ReferenceSequence modified +
Person modified +
Publication modified +
FunctionalStatusType modified +
RetractionStatus modified +
Anatomy modified +
Pathway modified +
_UpdateTracker modified +
CellLineagePath modified +
FrontPage modified +
ReferenceDNASequence modified +
DrugActionType modified +
ReviewStatus modified +
Requirement modified +
NegativeGeneExpressionRegulation modified +
PathwayDiagram modified +
Reaction modified +
ControlledVocabulary modified +
Book modified +
NegativePrecedingEventReason modified +
PsiMod modified +
CellType modified +
PositiveRegulation modified +
ChemicalDrug modified +
CellDevelopmentStep authored +
ChemicalDrug authored 1
SimpleEntity authored 1
BlackBoxEvent authored +
Cell authored 1
Reaction authored +
OtherEntity authored 1
Drug authored 1
CandidateSet authored 1
InteractionEvent authored +
DefinedSet authored 1
FailedReaction authored +
CellLineagePath authored +
Polymer authored 1
Pathway authored +
Polymerisation authored +
ProteinDrug authored 1
GenomeEncodedEntity authored 1
Event authored +
EntitySet authored 1
Complex authored 1
EntityWithAccessionedSequence authored 1
PhysicalEntity authored 1
Depolymerisation authored +
ReactionlikeEvent authored +
RNADrug authored 1
Cell edited +
BlackBoxEvent edited +
ChemicalDrug edited +
SimpleEntity edited +
CellDevelopmentStep edited +
Reaction edited +
CandidateSet edited +
OtherEntity edited +
Drug edited +
DefinedSet edited +
InteractionEvent edited +
Pathway edited +
Polymer edited +
CellLineagePath edited +
FailedReaction edited +
Polymerisation edited +
EntitySet edited +
Event edited +
GenomeEncodedEntity edited +
ProteinDrug edited +
ReactionlikeEvent edited +
Depolymerisation edited +
PhysicalEntity edited +
EntityWithAccessionedSequence edited +
Complex edited +
RNADrug edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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