Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Polymerisation reviewed +
Pathway reviewed +
ChemicalDrug reviewed +
RNADrug reviewed +
Depolymerisation reviewed +
EntityWithAccessionedSequence reviewed +
CellLineagePath reviewed +
SimpleEntity reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
FailedReaction reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
Cell reviewed +
OtherEntity reviewed +
PhysicalEntity reviewed +
ProteinDrug reviewed +
Polymer reviewed +
InteractionEvent reviewed +
Complex reviewed +
Event reviewed +
ReactionlikeEvent reviewed +
CellDevelopmentStep reviewed +
Drug reviewed +
Reaction reviewed +
EntitySet reviewed +
_Deleted replacementInstances +
InteractionEvent revised +
ReactionlikeEvent revised +
Event revised +
Complex revised +
Polymer revised +
OtherEntity revised +
Cell revised +
PhysicalEntity revised +
ProteinDrug revised +
Reaction revised +
EntitySet revised +
Drug revised +
CellDevelopmentStep revised +
Depolymerisation revised +
RNADrug revised +
ChemicalDrug revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
Polymerisation revised +
Pathway revised +
DefinedSet revised +
SimpleEntity revised +
BlackBoxEvent revised +
GenomeEncodedEntity revised +
CandidateSet revised +
FailedReaction revised +
ReactionlikeEvent edited +
Event edited +
Complex edited +
InteractionEvent edited +
Polymer edited +
ProteinDrug edited +
Cell edited +
PhysicalEntity edited +
OtherEntity edited +
EntitySet edited +
Reaction edited +
Drug edited +
CellDevelopmentStep edited +
CellLineagePath edited +
EntityWithAccessionedSequence edited +
RNADrug edited +
Depolymerisation edited +
ChemicalDrug edited +
Pathway edited +
Polymerisation edited +
DefinedSet edited +
CandidateSet edited +
FailedReaction edited +
SimpleEntity edited +
GenomeEncodedEntity edited +
BlackBoxEvent edited +
Polymerisation structureModified +
Pathway structureModified +
InteractionEvent structureModified +
Depolymerisation structureModified +
CellLineagePath structureModified +
ReactionlikeEvent structureModified +
Event structureModified +
BlackBoxEvent structureModified +
CellDevelopmentStep structureModified +
FailedReaction structureModified +
Reaction structureModified +
RegulationReference created 1
PhysicalEntity created 1
Disease created 1
GroupModifiedResidue created 1
DatabaseObject created 1
CellDevelopmentStep created 1
FunctionalStatus created 1
NonsenseMutation created 1
ReplacedResidue created 1
Reaction created 1
DatabaseIdentifier created 1
MarkerReference created 1
ReviewStatus created 1
ReferenceIsoform created 1
Figure created 1
ReferenceGeneProduct created 1
ControlReference created 1
Publication created 1
Species created 1
GO_MolecularFunction created 1
ReferenceEntity created 1
ReactionType created 1
ChemicalDrug created 1
TranscriptionalModification created 1
GeneticallyModifiedResidue created 1
EntityWithAccessionedSequence created 1
CellLineagePath created 1
AbstractModifiedResidue created 1
Taxon created 1
IntraChainCrosslinkedResidue created 1
TranslationalModification created 1
Cell created 1
PsiMod created 1
InteractionEvent created 1
URL created 1
InterChainCrosslinkedResidue created 1
StableIdentifierReleaseStatus created 1
ReferenceTherapeutic created 1
_DeletedInstance created 1
DrugActionType created 1
ControlledVocabulary created 1
Affiliation created 1
Polymerisation created 1
FragmentModification created 1
RetractionStatus created 1
NegativePrecedingEventReason created 1
RNADrug created 1
FailedReaction created 1
GO_CellularComponent created 1
GO_BiologicalProcess created 1
StableIdentifierHistory created 1
Anatomy created 1
InstanceEdit created 1
ProteinDrug created 1
FragmentInsertionModification created 1
Polymer created 1
PhysicalEntityCellType created 1
Compartment created 1
Event created 1
FrontPage created 1
CatalystActivityReference created 1
SequenceOntology created 1
Summation created 1
PositiveGeneExpressionRegulation created 1
FragmentReplacedModification created 1
Person created 1
NegativePrecedingEvent created 1
Drug created 1
Book created 1
DeletedControlledVocabulary created 1
CellType created 1
ReferenceGroup created 1
EntityFunctionalStatus created 1
NegativeRegulation created 1
CatalystActivity created 1
Pathway created 1
GenomeEncodedEntity created 1
SimpleEntity created 1
ReferenceSequence created 1
Requirement created 1
CandidateSet created 1
ReferenceDNASequence created 1
DefinedSet created 1
NegativeGeneExpressionRegulation created 1
_Deleted created 1
OtherEntity created 1
EvidenceType created 1
Complex created 1
ExternalOntology created 1
ReactionlikeEvent created 1
CrosslinkedResidue created 1
PositiveRegulation created 1
ReferenceRNASequence created 1
ReferenceMolecule created 1
LiteratureReference created 1
ReferenceDatabase created 1
EntitySet created 1
FragmentDeletionModification created 1
ModifiedNucleotide created 1
Regulation created 1
ModifiedResidue created 1
Depolymerisation created 1
StableIdentifier created 1
FunctionalStatusType created 1
BlackBoxEvent created 1
PathwayDiagram created 1
_UpdateTracker created 1
_Release created 1
ModifiedNucleotide modified +
Regulation modified +
ModifiedResidue modified +
StableIdentifier modified +
Depolymerisation modified +
FunctionalStatusType modified +
BlackBoxEvent modified +
_UpdateTracker modified +
PathwayDiagram modified +
_Release modified +
OtherEntity modified +
EvidenceType modified +
Complex modified +
ExternalOntology modified +
ReactionlikeEvent modified +
CrosslinkedResidue modified +
ReferenceRNASequence modified +
PositiveRegulation modified +
ReferenceMolecule modified +
LiteratureReference modified +
ReferenceDatabase modified +
EntitySet modified +
FragmentDeletionModification modified +
EntityFunctionalStatus modified +
ReferenceGroup modified +
NegativeRegulation modified +
CatalystActivity modified +
Pathway modified +
GenomeEncodedEntity modified +
SimpleEntity modified +
ReferenceSequence modified +
Requirement modified +
CandidateSet modified +
ReferenceDNASequence modified +
DefinedSet modified +
NegativeGeneExpressionRegulation modified +
_Deleted modified +
InstanceEdit modified +
FragmentInsertionModification modified +
ProteinDrug modified +
PhysicalEntityCellType modified +
Polymer modified +
Compartment modified +
Event modified +
FrontPage modified +
CatalystActivityReference modified +
PositiveGeneExpressionRegulation modified +
SequenceOntology modified +
Summation modified +
FragmentReplacedModification modified +
Drug modified +
NegativePrecedingEvent modified +
Person modified +
Book modified +
CellType modified +
DeletedControlledVocabulary modified +
Affiliation modified +
Polymerisation modified +
FragmentModification modified +
RNADrug modified +
RetractionStatus modified +
NegativePrecedingEventReason modified +
FailedReaction modified +
GO_CellularComponent modified +
GO_BiologicalProcess modified +
StableIdentifierHistory modified +
Anatomy modified +
TranslationalModification modified +
PsiMod modified +
Cell modified +
InteractionEvent modified +
URL modified +
InterChainCrosslinkedResidue modified +
StableIdentifierReleaseStatus modified +
ReferenceTherapeutic modified +
DrugActionType modified +
_DeletedInstance modified +
ControlledVocabulary modified +
ReviewStatus modified +
Figure modified +
ReferenceGeneProduct modified +
ReferenceIsoform modified +
ControlReference modified +
Publication modified +
Species modified +
GO_MolecularFunction modified +
ReferenceEntity modified +
ReactionType modified +
ChemicalDrug modified +
TranscriptionalModification modified +
GeneticallyModifiedResidue modified +
EntityWithAccessionedSequence modified +
CellLineagePath modified +
AbstractModifiedResidue modified +
IntraChainCrosslinkedResidue modified +
Taxon modified +
RegulationReference modified +
PhysicalEntity modified +
Disease modified +
GroupModifiedResidue modified +
DatabaseObject modified +
CellDevelopmentStep modified +
ReplacedResidue modified +
NonsenseMutation modified +
FunctionalStatus modified +
Reaction modified +
MarkerReference modified +
DatabaseIdentifier modified +
BlackBoxEvent authored +
GenomeEncodedEntity authored 1
SimpleEntity authored 1
CandidateSet authored 1
FailedReaction authored +
DefinedSet authored 1
Polymerisation authored +
Pathway authored +
RNADrug authored 1
ChemicalDrug authored 1
Depolymerisation authored +
CellLineagePath authored +
EntityWithAccessionedSequence authored 1
Drug authored 1
CellDevelopmentStep authored +
Reaction authored +
EntitySet authored 1
Polymer authored 1
Cell authored 1
PhysicalEntity authored 1
ProteinDrug authored 1
OtherEntity authored 1
InteractionEvent authored +
ReactionlikeEvent authored +
Event authored +
Complex authored 1
Reaction internalReviewed +
CellDevelopmentStep internalReviewed +
FailedReaction internalReviewed +
BlackBoxEvent internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +
CellLineagePath internalReviewed +
InteractionEvent internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
Polymerisation internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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