Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
_Deleted replacementInstances +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
ProteinDrug reviewed +
Event reviewed +
Polymerisation reviewed +
Cell reviewed +
RNADrug reviewed +
CellLineagePath reviewed +
FailedReaction reviewed +
ChemicalDrug reviewed +
OtherEntity reviewed +
Depolymerisation reviewed +
Drug reviewed +
BlackBoxEvent reviewed +
PhysicalEntity reviewed +
SimpleEntity reviewed +
DefinedSet reviewed +
Reaction reviewed +
CandidateSet reviewed +
EntityWithAccessionedSequence reviewed +
ReactionlikeEvent reviewed +
EntitySet reviewed +
Pathway reviewed +
Complex reviewed +
CellDevelopmentStep reviewed +
Polymer reviewed +
Reaction internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
Pathway internalReviewed +
CellDevelopmentStep internalReviewed +
Depolymerisation internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Event internalReviewed +
Polymerisation internalReviewed +
Book modified +
DatabaseObject modified +
Regulation modified +
Cell modified +
ReviewStatus modified +
ModifiedNucleotide modified +
ReactionType modified +
StableIdentifierReleaseStatus modified +
CellLineagePath modified +
PsiMod modified +
PositiveGeneExpressionRegulation modified +
IntraChainCrosslinkedResidue modified +
EntityFunctionalStatus modified +
_Deleted modified +
NonsenseMutation modified +
ChemicalDrug modified +
Species modified +
NegativeGeneExpressionRegulation modified +
SimpleEntity modified +
CatalystActivity modified +
DatabaseIdentifier modified +
Complex modified +
CrosslinkedResidue modified +
ReferenceGeneProduct modified +
FragmentModification modified +
URL modified +
CandidateSet modified +
PhysicalEntityCellType modified +
LiteratureReference modified +
Summation modified +
InstanceEdit modified +
Taxon modified +
GroupModifiedResidue modified +
PathwayDiagram modified +
Event modified +
InteractionEvent modified +
FunctionalStatus modified +
GenomeEncodedEntity modified +
DeletedControlledVocabulary modified +
ModifiedResidue modified +
Requirement modified +
FailedReaction modified +
ReferenceSequence modified +
StableIdentifier modified +
Person modified +
TranscriptionalModification modified +
ReferenceEntity modified +
Anatomy modified +
EvidenceType modified +
_UpdateTracker modified +
GeneticallyModifiedResidue modified +
CellType modified +
ProteinDrug modified +
ReferenceIsoform modified +
FrontPage modified +
Affiliation modified +
RNADrug modified +
ControlReference modified +
GO_CellularComponent modified +
StableIdentifierHistory modified +
_DeletedInstance modified +
NegativePrecedingEventReason modified +
GO_MolecularFunction modified +
Depolymerisation modified +
FunctionalStatusType modified +
ReferenceMolecule modified +
OtherEntity modified +
NegativeRegulation modified +
_Release modified +
RegulationReference modified +
CatalystActivityReference modified +
PhysicalEntity modified +
FragmentInsertionModification modified +
FragmentReplacedModification modified +
AbstractModifiedResidue modified +
Pathway modified +
ReactionlikeEvent modified +
EntitySet modified +
Figure modified +
FragmentDeletionModification modified +
Reaction modified +
InterChainCrosslinkedResidue modified +
Polymer modified +
SequenceOntology modified +
Disease modified +
Polymerisation modified +
ReferenceGroup modified +
MarkerReference modified +
Publication modified +
TranslationalModification modified +
Drug modified +
NegativePrecedingEvent modified +
Compartment modified +
ReferenceDNASequence modified +
ReferenceDatabase modified +
ReferenceTherapeutic modified +
BlackBoxEvent modified +
DefinedSet modified +
ControlledVocabulary modified +
PositiveRegulation modified +
ReplacedResidue modified +
GO_BiologicalProcess modified +
RetractionStatus modified +
ReferenceRNASequence modified +
EntityWithAccessionedSequence modified +
ExternalOntology modified +
DrugActionType modified +
CellDevelopmentStep modified +
Event revised +
ProteinDrug revised +
InteractionEvent revised +
GenomeEncodedEntity revised +
Polymerisation revised +
Cell revised +
RNADrug revised +
FailedReaction revised +
CellLineagePath revised +
Drug revised +
OtherEntity revised +
ChemicalDrug revised +
Depolymerisation revised +
BlackBoxEvent revised +
PhysicalEntity revised +
DefinedSet revised +
SimpleEntity revised +
ReactionlikeEvent revised +
Pathway revised +
Complex revised +
EntitySet revised +
Reaction revised +
CandidateSet revised +
EntityWithAccessionedSequence revised +
Polymer revised +
CellDevelopmentStep revised +
ReferenceRNASequence created 1
EntityWithAccessionedSequence created 1
ExternalOntology created 1
DrugActionType created 1
CellDevelopmentStep created 1
ReferenceTherapeutic created 1
BlackBoxEvent created 1
DefinedSet created 1
ControlledVocabulary created 1
PositiveRegulation created 1
ReplacedResidue created 1
GO_BiologicalProcess created 1
RetractionStatus created 1
Publication created 1
TranslationalModification created 1
Drug created 1
NegativePrecedingEvent created 1
Compartment created 1
ReferenceDNASequence created 1
ReferenceDatabase created 1
Disease created 1
Polymerisation created 1
ReferenceGroup created 1
MarkerReference created 1
EntitySet created 1
ReactionlikeEvent created 1
Pathway created 1
Figure created 1
FragmentDeletionModification created 1
Reaction created 1
InterChainCrosslinkedResidue created 1
Polymer created 1
SequenceOntology created 1
NegativeRegulation created 1
RegulationReference created 1
_Release created 1
PhysicalEntity created 1
CatalystActivityReference created 1
FragmentInsertionModification created 1
FragmentReplacedModification created 1
AbstractModifiedResidue created 1
GO_MolecularFunction created 1
Depolymerisation created 1
FunctionalStatusType created 1
OtherEntity created 1
ReferenceMolecule created 1
ReferenceIsoform created 1
FrontPage created 1
ProteinDrug created 1
Affiliation created 1
ControlReference created 1
RNADrug created 1
StableIdentifierHistory created 1
GO_CellularComponent created 1
NegativePrecedingEventReason created 1
_DeletedInstance created 1
_UpdateTracker created 1
GeneticallyModifiedResidue created 1
CellType created 1
StableIdentifier created 1
ReferenceSequence created 1
Person created 1
TranscriptionalModification created 1
ReferenceEntity created 1
Anatomy created 1
EvidenceType created 1
FailedReaction created 1
PathwayDiagram created 1
Event created 1
FunctionalStatus created 1
InteractionEvent created 1
GenomeEncodedEntity created 1
DeletedControlledVocabulary created 1
ModifiedResidue created 1
Requirement created 1
CatalystActivity created 1
DatabaseIdentifier created 1
CrosslinkedResidue created 1
Complex created 1
FragmentModification created 1
ReferenceGeneProduct created 1
URL created 1
CandidateSet created 1
PhysicalEntityCellType created 1
LiteratureReference created 1
InstanceEdit created 1
Summation created 1
Taxon created 1
GroupModifiedResidue created 1
Species created 1
NegativeGeneExpressionRegulation created 1
SimpleEntity created 1
CellLineagePath created 1
PositiveGeneExpressionRegulation created 1
PsiMod created 1
IntraChainCrosslinkedResidue created 1
EntityFunctionalStatus created 1
_Deleted created 1
NonsenseMutation created 1
ChemicalDrug created 1
Book created 1
DatabaseObject created 1
Regulation created 1
Cell created 1
ReviewStatus created 1
ModifiedNucleotide created 1
StableIdentifierReleaseStatus created 1
ReactionType created 1
CellDevelopmentStep structureModified +
Depolymerisation structureModified +
Reaction structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
Pathway structureModified +
ReactionlikeEvent structureModified +
Polymerisation structureModified +
BlackBoxEvent structureModified +
Event structureModified +
InteractionEvent structureModified +
Depolymerisation edited +
OtherEntity edited +
ChemicalDrug edited +
Drug edited +
CellLineagePath edited +
FailedReaction edited +
RNADrug edited +
Cell edited +
Polymerisation edited +
GenomeEncodedEntity edited +
ProteinDrug edited +
Event edited +
InteractionEvent edited +
CellDevelopmentStep edited +
Polymer edited +
EntityWithAccessionedSequence edited +
Reaction edited +
CandidateSet edited +
Complex edited +
ReactionlikeEvent edited +
Pathway edited +
EntitySet edited +
SimpleEntity edited +
DefinedSet edited +
BlackBoxEvent edited +
PhysicalEntity edited +
Polymer authored 1
CellDevelopmentStep authored +
ReactionlikeEvent authored +
Pathway authored +
Complex authored 1
EntitySet authored 1
Reaction authored +
CandidateSet authored 1
EntityWithAccessionedSequence authored 1
DefinedSet authored 1
SimpleEntity authored 1
PhysicalEntity authored 1
BlackBoxEvent authored +
Drug authored 1
ChemicalDrug authored 1
OtherEntity authored 1
Depolymerisation authored +
FailedReaction authored +
CellLineagePath authored +
Polymerisation authored +
Cell authored 1
RNADrug authored 1
InteractionEvent authored +
Event authored +
ProteinDrug authored 1
GenomeEncodedEntity authored 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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