Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Reaction structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
CellDevelopmentStep structureModified +
Polymerisation structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
FailedReaction structureModified +
Pathway structureModified +
CellLineagePath structureModified +
Depolymerisation structureModified +
Depolymerisation edited +
EntitySet edited +
SimpleEntity edited +
Pathway edited +
Drug edited +
EntityWithAccessionedSequence edited +
PhysicalEntity edited +
CellDevelopmentStep edited +
GenomeEncodedEntity edited +
BlackBoxEvent edited +
InteractionEvent edited +
DefinedSet edited +
CellLineagePath edited +
FailedReaction edited +
ReactionlikeEvent edited +
CandidateSet edited +
Event edited +
OtherEntity edited +
Complex edited +
Cell edited +
Polymerisation edited +
ChemicalDrug edited +
Polymer edited +
Reaction edited +
ProteinDrug edited +
RNADrug edited +
InteractionEvent revised +
BlackBoxEvent revised +
GenomeEncodedEntity revised +
CellDevelopmentStep revised +
PhysicalEntity revised +
EntityWithAccessionedSequence revised +
Drug revised +
SimpleEntity revised +
Pathway revised +
EntitySet revised +
Depolymerisation revised +
RNADrug revised +
ProteinDrug revised +
Reaction revised +
Polymer revised +
ChemicalDrug revised +
Polymerisation revised +
Cell revised +
Complex revised +
OtherEntity revised +
Event revised +
CandidateSet revised +
FailedReaction revised +
ReactionlikeEvent revised +
CellLineagePath revised +
DefinedSet revised +
Cell authored 1
Complex authored 1
OtherEntity authored 1
Polymerisation authored +
Polymer authored 1
ChemicalDrug authored 1
ProteinDrug authored 1
RNADrug authored 1
Reaction authored +
DefinedSet authored 1
CellLineagePath authored +
FailedReaction authored +
ReactionlikeEvent authored +
Event authored +
CandidateSet authored 1
GenomeEncodedEntity authored 1
CellDevelopmentStep authored +
InteractionEvent authored +
BlackBoxEvent authored +
Depolymerisation authored +
EntitySet authored 1
EntityWithAccessionedSequence authored 1
SimpleEntity authored 1
Pathway authored +
Drug authored 1
PhysicalEntity authored 1
CellLineagePath reviewed +
DefinedSet reviewed +
Event reviewed +
CandidateSet reviewed +
FailedReaction reviewed +
ReactionlikeEvent reviewed +
Polymerisation reviewed +
Cell reviewed +
Complex reviewed +
OtherEntity reviewed +
RNADrug reviewed +
ProteinDrug reviewed +
Reaction reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
Pathway reviewed +
SimpleEntity reviewed +
Drug reviewed +
EntitySet reviewed +
Depolymerisation reviewed +
PhysicalEntity reviewed +
InteractionEvent reviewed +
BlackBoxEvent reviewed +
CellDevelopmentStep reviewed +
GenomeEncodedEntity reviewed +
_Deleted replacementInstances +
Affiliation modified +
Figure modified +
FailedReaction modified +
NegativePrecedingEventReason modified +
InstanceEdit modified +
PositiveGeneExpressionRegulation modified +
CellType modified +
DrugActionType modified +
DefinedSet modified +
RNADrug modified +
ChemicalDrug modified +
ControlledVocabulary modified +
DatabaseIdentifier modified +
Complex modified +
OtherEntity modified +
PsiMod modified +
FunctionalStatusType modified +
PhysicalEntity modified +
Summation modified +
CatalystActivity modified +
_Deleted modified +
Depolymerisation modified +
PathwayDiagram modified +
GroupModifiedResidue modified +
CellDevelopmentStep modified +
FragmentReplacedModification modified +
NegativeRegulation modified +
FragmentDeletionModification modified +
GeneticallyModifiedResidue modified +
ReferenceGeneProduct modified +
_UpdateTracker modified +
Compartment modified +
ReactionlikeEvent modified +
TranscriptionalModification modified +
FrontPage modified +
ReferenceIsoform modified +
ReferenceRNASequence modified +
ReferenceSequence modified +
PhysicalEntityCellType modified +
Polymerisation modified +
URL modified +
SequenceOntology modified +
GO_MolecularFunction modified +
ReferenceGroup modified +
IntraChainCrosslinkedResidue modified +
Cell modified +
Taxon modified +
Publication modified +
Requirement modified +
DatabaseObject modified +
StableIdentifierHistory modified +
Pathway modified +
NonsenseMutation modified +
AbstractModifiedResidue modified +
RetractionStatus modified +
TranslationalModification modified +
GenomeEncodedEntity modified +
RegulationReference modified +
Person modified +
InterChainCrosslinkedResidue modified +
NegativeGeneExpressionRegulation modified +
ReferenceTherapeutic modified +
EvidenceType modified +
CellLineagePath modified +
ProteinDrug modified +
ReferenceMolecule modified +
StableIdentifier modified +
LiteratureReference modified +
Reaction modified +
_Release modified +
ExternalOntology modified +
StableIdentifierReleaseStatus modified +
ModifiedResidue modified +
ReferenceDNASequence modified +
Species modified +
Anatomy modified +
GO_BiologicalProcess modified +
EntityWithAccessionedSequence modified +
Regulation modified +
EntityFunctionalStatus modified +
EntitySet modified +
FragmentModification modified +
_DeletedInstance modified +
NegativePrecedingEvent modified +
PositiveRegulation modified +
FunctionalStatus modified +
DeletedControlledVocabulary modified +
ModifiedNucleotide modified +
Event modified +
CandidateSet modified +
ReferenceEntity modified +
ReactionType modified +
GO_CellularComponent modified +
FragmentInsertionModification modified +
Polymer modified +
MarkerReference modified +
CrosslinkedResidue modified +
ReplacedResidue modified +
Drug modified +
SimpleEntity modified +
Disease modified +
ReferenceDatabase modified +
CatalystActivityReference modified +
ReviewStatus modified +
InteractionEvent modified +
BlackBoxEvent modified +
ControlReference modified +
Book modified +
ReferenceTherapeutic created 1
NegativeGeneExpressionRegulation created 1
RetractionStatus created 1
TranslationalModification created 1
AbstractModifiedResidue created 1
InterChainCrosslinkedResidue created 1
GenomeEncodedEntity created 1
RegulationReference created 1
Person created 1
Pathway created 1
NonsenseMutation created 1
Requirement created 1
DatabaseObject created 1
Publication created 1
Taxon created 1
StableIdentifierHistory created 1
GO_MolecularFunction created 1
SequenceOntology created 1
URL created 1
Polymerisation created 1
ReferenceGroup created 1
Cell created 1
IntraChainCrosslinkedResidue created 1
PhysicalEntityCellType created 1
ReferenceIsoform created 1
FrontPage created 1
ReferenceSequence created 1
ReferenceRNASequence created 1
TranscriptionalModification created 1
ReactionlikeEvent created 1
GeneticallyModifiedResidue created 1
_UpdateTracker created 1
FragmentDeletionModification created 1
Compartment created 1
ReferenceGeneProduct created 1
FragmentReplacedModification created 1
NegativeRegulation created 1
GroupModifiedResidue created 1
CellDevelopmentStep created 1
_Deleted created 1
CatalystActivity created 1
Summation created 1
Depolymerisation created 1
PathwayDiagram created 1
FunctionalStatusType created 1
PsiMod created 1
PhysicalEntity created 1
DatabaseIdentifier created 1
ControlledVocabulary created 1
OtherEntity created 1
Complex created 1
RNADrug created 1
ChemicalDrug created 1
NegativePrecedingEventReason created 1
DefinedSet created 1
DrugActionType created 1
InstanceEdit created 1
CellType created 1
PositiveGeneExpressionRegulation created 1
Figure created 1
Affiliation created 1
FailedReaction created 1
Book created 1
ControlReference created 1
BlackBoxEvent created 1
ReviewStatus created 1
CatalystActivityReference created 1
InteractionEvent created 1
SimpleEntity created 1
Drug created 1
ReplacedResidue created 1
ReferenceDatabase created 1
Disease created 1
CrosslinkedResidue created 1
MarkerReference created 1
FragmentInsertionModification created 1
Polymer created 1
GO_CellularComponent created 1
CandidateSet created 1
Event created 1
ReferenceEntity created 1
ReactionType created 1
FunctionalStatus created 1
PositiveRegulation created 1
DeletedControlledVocabulary created 1
ModifiedNucleotide created 1
NegativePrecedingEvent created 1
_DeletedInstance created 1
Regulation created 1
EntityWithAccessionedSequence created 1
EntitySet created 1
FragmentModification created 1
EntityFunctionalStatus created 1
GO_BiologicalProcess created 1
Anatomy created 1
Species created 1
ExternalOntology created 1
StableIdentifierReleaseStatus created 1
ModifiedResidue created 1
ReferenceDNASequence created 1
StableIdentifier created 1
LiteratureReference created 1
Reaction created 1
ProteinDrug created 1
ReferenceMolecule created 1
_Release created 1
CellLineagePath created 1
EvidenceType created 1
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
BlackBoxEvent internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
ReactionlikeEvent internalReviewed +
Event internalReviewed +
Depolymerisation internalReviewed +
CellLineagePath internalReviewed +
Pathway internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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