Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
PhysicalEntity reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
ChemicalDrug reviewed +
GenomeEncodedEntity reviewed +
InteractionEvent reviewed +
CellLineagePath reviewed +
Reaction reviewed +
CandidateSet reviewed +
Cell reviewed +
ProteinDrug reviewed +
Complex reviewed +
OtherEntity reviewed +
FailedReaction reviewed +
SimpleEntity reviewed +
Pathway reviewed +
CellDevelopmentStep reviewed +
ReactionlikeEvent reviewed +
EntityWithAccessionedSequence reviewed +
Drug reviewed +
RNADrug reviewed +
Event reviewed +
Depolymerisation reviewed +
Polymerisation reviewed +
DefinedSet reviewed +
EntitySet reviewed +
GO_MolecularFunction modified +
StableIdentifierHistory modified +
GO_BiologicalProcess modified +
Compartment modified +
ExternalOntology modified +
ReferenceRNASequence modified +
Book modified +
Person modified +
AbstractModifiedResidue modified +
MarkerReference modified +
_Deleted modified +
Polymerisation modified +
FunctionalStatus modified +
GeneticallyModifiedResidue modified +
LiteratureReference modified +
BlackBoxEvent modified +
NonsenseMutation modified +
ReferenceMolecule modified +
RegulationReference modified +
PhysicalEntityCellType modified +
ProteinDrug modified +
ReviewStatus modified +
CatalystActivityReference modified +
Affiliation modified +
CellType modified +
DrugActionType modified +
NegativeGeneExpressionRegulation modified +
ReferenceGroup modified +
Anatomy modified +
FrontPage modified +
Drug modified +
EntityWithAccessionedSequence modified +
ControlledVocabulary modified +
_DeletedInstance modified +
ControlReference modified +
EntitySet modified +
EntityFunctionalStatus modified +
ReferenceIsoform modified +
NegativePrecedingEventReason modified +
ModifiedResidue modified +
ChemicalDrug modified +
CandidateSet modified +
ReferenceTherapeutic modified +
ReferenceDatabase modified +
DeletedControlledVocabulary modified +
Requirement modified +
Regulation modified +
PathwayDiagram modified +
FailedReaction modified +
CellDevelopmentStep modified +
GO_CellularComponent modified +
ReplacedResidue modified +
ReactionlikeEvent modified +
Event modified +
RetractionStatus modified +
CatalystActivity modified +
FragmentDeletionModification modified +
PositiveRegulation modified +
Summation modified +
FragmentModification modified +
ReferenceDNASequence modified +
ReferenceSequence modified +
SequenceOntology modified +
Depolymerisation modified +
DefinedSet modified +
EvidenceType modified +
CellLineagePath modified +
InstanceEdit modified +
Publication modified +
ReferenceEntity modified +
DatabaseObject modified +
OtherEntity modified +
SimpleEntity modified +
_Release modified +
FragmentReplacedModification modified +
RNADrug modified +
ReferenceGeneProduct modified +
StableIdentifierReleaseStatus modified +
DatabaseIdentifier modified +
Species modified +
InterChainCrosslinkedResidue modified +
Figure modified +
Taxon modified +
IntraChainCrosslinkedResidue modified +
NegativeRegulation modified +
NegativePrecedingEvent modified +
PsiMod modified +
Polymer modified +
PhysicalEntity modified +
StableIdentifier modified +
GenomeEncodedEntity modified +
PositiveGeneExpressionRegulation modified +
_UpdateTracker modified +
FunctionalStatusType modified +
Reaction modified +
TranscriptionalModification modified +
URL modified +
InteractionEvent modified +
GroupModifiedResidue modified +
Disease modified +
Complex modified +
FragmentInsertionModification modified +
TranslationalModification modified +
ModifiedNucleotide modified +
Cell modified +
ReactionType modified +
CrosslinkedResidue modified +
Pathway modified +
Polymerisation authored +
DefinedSet authored 1
EntitySet authored 1
Depolymerisation authored +
EntityWithAccessionedSequence authored 1
Event authored +
Drug authored 1
RNADrug authored 1
CellDevelopmentStep authored +
ReactionlikeEvent authored +
OtherEntity authored 1
SimpleEntity authored 1
FailedReaction authored +
Pathway authored +
ProteinDrug authored 1
Cell authored 1
Complex authored 1
InteractionEvent authored +
CellLineagePath authored +
Reaction authored +
CandidateSet authored 1
Polymer authored 1
BlackBoxEvent authored +
PhysicalEntity authored 1
ChemicalDrug authored 1
GenomeEncodedEntity authored 1
_Deleted replacementInstances +
Polymerisation structureModified +
Pathway structureModified +
FailedReaction structureModified +
Depolymerisation structureModified +
Reaction structureModified +
Event structureModified +
InteractionEvent structureModified +
CellLineagePath structureModified +
CellDevelopmentStep structureModified +
BlackBoxEvent structureModified +
ReactionlikeEvent structureModified +
CrosslinkedResidue created 1
ReactionType created 1
Pathway created 1
Disease created 1
ModifiedNucleotide created 1
TranslationalModification created 1
Cell created 1
Complex created 1
FragmentInsertionModification created 1
InteractionEvent created 1
TranscriptionalModification created 1
URL created 1
Reaction created 1
GroupModifiedResidue created 1
Polymer created 1
PhysicalEntity created 1
PsiMod created 1
FunctionalStatusType created 1
_UpdateTracker created 1
StableIdentifier created 1
GenomeEncodedEntity created 1
PositiveGeneExpressionRegulation created 1
NegativeRegulation created 1
IntraChainCrosslinkedResidue created 1
Taxon created 1
NegativePrecedingEvent created 1
Species created 1
DatabaseIdentifier created 1
Figure created 1
InterChainCrosslinkedResidue created 1
ReferenceGeneProduct created 1
FragmentReplacedModification created 1
RNADrug created 1
StableIdentifierReleaseStatus created 1
_Release created 1
OtherEntity created 1
DatabaseObject created 1
SimpleEntity created 1
ReferenceEntity created 1
CellLineagePath created 1
Publication created 1
InstanceEdit created 1
EvidenceType created 1
DefinedSet created 1
SequenceOntology created 1
ReferenceSequence created 1
FragmentModification created 1
Summation created 1
ReferenceDNASequence created 1
Depolymerisation created 1
RetractionStatus created 1
Event created 1
FragmentDeletionModification created 1
PositiveRegulation created 1
CatalystActivity created 1
CellDevelopmentStep created 1
GO_CellularComponent created 1
ReplacedResidue created 1
ReactionlikeEvent created 1
FailedReaction created 1
PathwayDiagram created 1
Regulation created 1
Requirement created 1
ReferenceDatabase created 1
DeletedControlledVocabulary created 1
ReferenceTherapeutic created 1
CandidateSet created 1
ChemicalDrug created 1
NegativePrecedingEventReason created 1
ReferenceIsoform created 1
ModifiedResidue created 1
EntitySet created 1
EntityFunctionalStatus created 1
ControlReference created 1
_DeletedInstance created 1
EntityWithAccessionedSequence created 1
Drug created 1
FrontPage created 1
ControlledVocabulary created 1
Anatomy created 1
ReferenceGroup created 1
Affiliation created 1
CatalystActivityReference created 1
NegativeGeneExpressionRegulation created 1
DrugActionType created 1
CellType created 1
ProteinDrug created 1
ReviewStatus created 1
PhysicalEntityCellType created 1
RegulationReference created 1
ReferenceMolecule created 1
BlackBoxEvent created 1
NonsenseMutation created 1
Polymerisation created 1
_Deleted created 1
GeneticallyModifiedResidue created 1
LiteratureReference created 1
FunctionalStatus created 1
MarkerReference created 1
Person created 1
AbstractModifiedResidue created 1
ExternalOntology created 1
Book created 1
ReferenceRNASequence created 1
GO_MolecularFunction created 1
StableIdentifierHistory created 1
GO_BiologicalProcess created 1
Compartment created 1
CellDevelopmentStep revised +
ReactionlikeEvent revised +
EntityWithAccessionedSequence revised +
Drug revised +
Event revised +
RNADrug revised +
Depolymerisation revised +
DefinedSet revised +
Polymerisation revised +
EntitySet revised +
Polymer revised +
BlackBoxEvent revised +
PhysicalEntity revised +
ChemicalDrug revised +
GenomeEncodedEntity revised +
InteractionEvent revised +
CellLineagePath revised +
CandidateSet revised +
Reaction revised +
ProteinDrug revised +
Cell revised +
Complex revised +
OtherEntity revised +
FailedReaction revised +
SimpleEntity revised +
Pathway revised +
InteractionEvent internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
CellDevelopmentStep internalReviewed +
ReactionlikeEvent internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Pathway internalReviewed +
Depolymerisation internalReviewed +
Depolymerisation edited +
EntitySet edited +
DefinedSet edited +
Polymerisation edited +
ReactionlikeEvent edited +
CellDevelopmentStep edited +
Event edited +
Drug edited +
RNADrug edited +
EntityWithAccessionedSequence edited +
Complex edited +
ProteinDrug edited +
Cell edited +
Pathway edited +
FailedReaction edited +
SimpleEntity edited +
OtherEntity edited +
GenomeEncodedEntity edited +
ChemicalDrug edited +
PhysicalEntity edited +
BlackBoxEvent edited +
Polymer edited +
CandidateSet edited +
Reaction edited +
CellLineagePath edited +
InteractionEvent edited +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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