Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
FailedReaction reviewed +
RNADrug reviewed +
ProteinDrug reviewed +
Event reviewed +
OtherEntity reviewed +
SimpleEntity reviewed +
GenomeEncodedEntity reviewed +
BlackBoxEvent reviewed +
EntityWithAccessionedSequence reviewed +
Complex reviewed +
PhysicalEntity reviewed +
CandidateSet reviewed +
Drug reviewed +
CellLineagePath reviewed +
EntitySet reviewed +
Cell reviewed +
ReactionlikeEvent reviewed +
Reaction reviewed +
CellDevelopmentStep reviewed +
ChemicalDrug reviewed +
Polymer reviewed +
DefinedSet reviewed +
Depolymerisation reviewed +
Pathway reviewed +
InteractionEvent reviewed +
Polymerisation reviewed +
MarkerReference modified +
DatabaseIdentifier modified +
ControlledVocabulary modified +
FragmentReplacedModification modified +
Polymerisation modified +
InteractionEvent modified +
ExternalOntology modified +
DefinedSet modified +
Polymer modified +
ReferenceIsoform modified +
FunctionalStatus modified +
DeletedControlledVocabulary modified +
Disease modified +
Complex modified +
ProteinDrug modified +
DrugActionType modified +
RNADrug modified +
GO_MolecularFunction modified +
ReviewStatus modified +
FailedReaction modified +
StableIdentifierReleaseStatus modified +
GenomeEncodedEntity modified +
Event modified +
Affiliation modified +
ReferenceRNASequence modified +
ReferenceGroup modified +
Pathway modified +
DatabaseObject modified +
PsiMod modified +
CrosslinkedResidue modified +
InterChainCrosslinkedResidue modified +
CandidateSet modified +
NonsenseMutation modified +
Figure modified +
ReferenceTherapeutic modified +
_UpdateTracker modified +
EntityWithAccessionedSequence modified +
BlackBoxEvent modified +
Regulation modified +
AbstractModifiedResidue modified +
TranscriptionalModification modified +
ReactionType modified +
ReferenceMolecule modified +
LiteratureReference modified +
OtherEntity modified +
SequenceOntology modified +
_Deleted modified +
Person modified +
NegativeRegulation modified +
Depolymerisation modified +
CellLineagePath modified +
Publication modified +
Summation modified +
NegativeGeneExpressionRegulation modified +
PhysicalEntityCellType modified +
FunctionalStatusType modified +
ReactionlikeEvent modified +
Cell modified +
EntityFunctionalStatus modified +
Anatomy modified +
NegativePrecedingEventReason modified +
CatalystActivity modified +
ReplacedResidue modified +
Compartment modified +
Taxon modified +
GroupModifiedResidue modified +
IntraChainCrosslinkedResidue modified +
FrontPage modified +
_Release modified +
SimpleEntity modified +
ControlReference modified +
RegulationReference modified +
ReferenceDatabase modified +
StableIdentifierHistory modified +
ChemicalDrug modified +
ReferenceDNASequence modified +
ModifiedNucleotide modified +
ReferenceSequence modified +
Reaction modified +
CellDevelopmentStep modified +
InstanceEdit modified +
GeneticallyModifiedResidue modified +
RetractionStatus modified +
EvidenceType modified +
GO_BiologicalProcess modified +
TranslationalModification modified +
FragmentModification modified +
Drug modified +
ModifiedResidue modified +
PositiveGeneExpressionRegulation modified +
Book modified +
ReferenceGeneProduct modified +
StableIdentifier modified +
EntitySet modified +
CatalystActivityReference modified +
NegativePrecedingEvent modified +
_DeletedInstance modified +
PhysicalEntity modified +
URL modified +
Species modified +
Requirement modified +
GO_CellularComponent modified +
PositiveRegulation modified +
PathwayDiagram modified +
FragmentDeletionModification modified +
CellType modified +
ReferenceEntity modified +
FragmentInsertionModification modified +
PhysicalEntity authored 1
Complex authored 1
EntityWithAccessionedSequence authored 1
BlackBoxEvent authored +
GenomeEncodedEntity authored 1
SimpleEntity authored 1
OtherEntity authored 1
Event authored +
ProteinDrug authored 1
RNADrug authored 1
FailedReaction authored +
Polymerisation authored +
Pathway authored +
InteractionEvent authored +
DefinedSet authored 1
Depolymerisation authored +
Polymer authored 1
ChemicalDrug authored 1
Reaction authored +
CellDevelopmentStep authored +
ReactionlikeEvent authored +
Cell authored 1
EntitySet authored 1
Drug authored 1
CellLineagePath authored +
CandidateSet authored 1
CellDevelopmentStep structureModified +
Reaction structureModified +
BlackBoxEvent structureModified +
Depolymerisation structureModified +
Polymerisation structureModified +
InteractionEvent structureModified +
Pathway structureModified +
FailedReaction structureModified +
CellLineagePath structureModified +
Event structureModified +
ReactionlikeEvent structureModified +
FailedReaction edited +
ProteinDrug edited +
RNADrug edited +
Event edited +
OtherEntity edited +
GenomeEncodedEntity edited +
SimpleEntity edited +
EntityWithAccessionedSequence edited +
BlackBoxEvent edited +
Complex edited +
PhysicalEntity edited +
CandidateSet edited +
Drug edited +
CellLineagePath edited +
Cell edited +
EntitySet edited +
ReactionlikeEvent edited +
Reaction edited +
CellDevelopmentStep edited +
ChemicalDrug edited +
DefinedSet edited +
Depolymerisation edited +
Polymer edited +
Polymerisation edited +
Pathway edited +
InteractionEvent edited +
Compartment created 1
Taxon created 1
Anatomy created 1
NegativePrecedingEventReason created 1
CatalystActivity created 1
ReplacedResidue created 1
ReferenceDatabase created 1
RegulationReference created 1
SimpleEntity created 1
ControlReference created 1
FrontPage created 1
IntraChainCrosslinkedResidue created 1
GroupModifiedResidue created 1
_Release created 1
Depolymerisation created 1
NegativeRegulation created 1
Person created 1
_Deleted created 1
Cell created 1
EntityFunctionalStatus created 1
ReactionlikeEvent created 1
FunctionalStatusType created 1
NegativeGeneExpressionRegulation created 1
PhysicalEntityCellType created 1
Publication created 1
CellLineagePath created 1
Summation created 1
URL created 1
PhysicalEntity created 1
_DeletedInstance created 1
CatalystActivityReference created 1
NegativePrecedingEvent created 1
ReferenceEntity created 1
FragmentInsertionModification created 1
FragmentDeletionModification created 1
CellType created 1
PositiveRegulation created 1
PathwayDiagram created 1
Species created 1
GO_CellularComponent created 1
Requirement created 1
EvidenceType created 1
RetractionStatus created 1
GO_BiologicalProcess created 1
TranslationalModification created 1
FragmentModification created 1
GeneticallyModifiedResidue created 1
Reaction created 1
CellDevelopmentStep created 1
ReferenceSequence created 1
InstanceEdit created 1
StableIdentifierHistory created 1
ChemicalDrug created 1
ModifiedNucleotide created 1
ReferenceDNASequence created 1
ReferenceGeneProduct created 1
EntitySet created 1
StableIdentifier created 1
PositiveGeneExpressionRegulation created 1
Book created 1
ModifiedResidue created 1
Drug created 1
Complex created 1
Disease created 1
Event created 1
Affiliation created 1
ReferenceRNASequence created 1
GenomeEncodedEntity created 1
StableIdentifierReleaseStatus created 1
GO_MolecularFunction created 1
ReviewStatus created 1
FailedReaction created 1
DrugActionType created 1
ProteinDrug created 1
RNADrug created 1
ExternalOntology created 1
DefinedSet created 1
Polymer created 1
Polymerisation created 1
InteractionEvent created 1
ControlledVocabulary created 1
FragmentReplacedModification created 1
MarkerReference created 1
DatabaseIdentifier created 1
DeletedControlledVocabulary created 1
FunctionalStatus created 1
ReferenceIsoform created 1
ReactionType created 1
TranscriptionalModification created 1
AbstractModifiedResidue created 1
Regulation created 1
EntityWithAccessionedSequence created 1
_UpdateTracker created 1
BlackBoxEvent created 1
OtherEntity created 1
SequenceOntology created 1
ReferenceMolecule created 1
LiteratureReference created 1
DatabaseObject created 1
PsiMod created 1
Pathway created 1
ReferenceGroup created 1
ReferenceTherapeutic created 1
Figure created 1
NonsenseMutation created 1
CandidateSet created 1
CrosslinkedResidue created 1
InterChainCrosslinkedResidue created 1
_Deleted replacementInstances +
FailedReaction revised +
ProteinDrug revised +
RNADrug revised +
OtherEntity revised +
Event revised +
GenomeEncodedEntity revised +
SimpleEntity revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
Complex revised +
PhysicalEntity revised +
CandidateSet revised +
CellLineagePath revised +
Drug revised +
Cell revised +
EntitySet revised +
ReactionlikeEvent revised +
Reaction revised +
CellDevelopmentStep revised +
ChemicalDrug revised +
DefinedSet revised +
Depolymerisation revised +
Polymer revised +
Polymerisation revised +
Pathway revised +
InteractionEvent revised +
CellDevelopmentStep internalReviewed +
Reaction internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
Polymerisation internalReviewed +
InteractionEvent internalReviewed +
Pathway internalReviewed +
FailedReaction internalReviewed +
CellLineagePath internalReviewed +
Event internalReviewed +
ReactionlikeEvent internalReviewed +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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