Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
ReactionlikeEvent internalReviewed +
CellDevelopmentStep internalReviewed +
CellLineagePath internalReviewed +
Reaction internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
InteractionEvent internalReviewed +
Polymerisation internalReviewed +
FailedReaction internalReviewed +
Depolymerisation internalReviewed +
Pathway internalReviewed +
ProteinDrug authored 1
DefinedSet authored 1
FailedReaction authored +
Depolymerisation authored +
SimpleEntity authored 1
ReactionlikeEvent authored +
Reaction authored +
PhysicalEntity authored 1
RNADrug authored 1
Complex authored 1
Event authored +
CandidateSet authored 1
BlackBoxEvent authored +
EntitySet authored 1
OtherEntity authored 1
Pathway authored +
EntityWithAccessionedSequence authored 1
InteractionEvent authored +
Cell authored 1
Polymerisation authored +
CellLineagePath authored +
Drug authored 1
ChemicalDrug authored 1
CellDevelopmentStep authored +
GenomeEncodedEntity authored 1
Polymer authored 1
RNADrug edited +
PhysicalEntity edited +
Reaction edited +
ReactionlikeEvent edited +
SimpleEntity edited +
Depolymerisation edited +
FailedReaction edited +
DefinedSet edited +
ProteinDrug edited +
Polymer edited +
GenomeEncodedEntity edited +
Drug edited +
ChemicalDrug edited +
CellDevelopmentStep edited +
CellLineagePath edited +
Cell edited +
InteractionEvent edited +
Polymerisation edited +
Pathway edited +
EntityWithAccessionedSequence edited +
OtherEntity edited +
Complex edited +
Event edited +
BlackBoxEvent edited +
CandidateSet edited +
EntitySet edited +
_Deleted replacementInstances +
ModifiedNucleotide modified +
DeletedControlledVocabulary modified +
Pathway modified +
InteractionEvent modified +
LiteratureReference modified +
Complex modified +
GeneticallyModifiedResidue modified +
CrosslinkedResidue modified +
_DeletedInstance modified +
InterChainCrosslinkedResidue modified +
CatalystActivity modified +
ChemicalDrug modified +
CellDevelopmentStep modified +
ReviewStatus modified +
RegulationReference modified +
NonsenseMutation modified +
Publication modified +
ProteinDrug modified +
StableIdentifier modified +
Taxon modified +
SimpleEntity modified +
ReferenceSequence modified +
ReactionlikeEvent modified +
PsiMod modified +
PositiveRegulation modified +
ReferenceDatabase modified +
Cell modified +
Polymerisation modified +
GO_MolecularFunction modified +
TranscriptionalModification modified +
BlackBoxEvent modified +
InstanceEdit modified +
ControlReference modified +
Disease modified +
FunctionalStatusType modified +
GenomeEncodedEntity modified +
ControlledVocabulary modified +
IntraChainCrosslinkedResidue modified +
CellLineagePath modified +
ReferenceTherapeutic modified +
EvidenceType modified +
ReferenceMolecule modified +
FragmentDeletionModification modified +
CellType modified +
Species modified +
StableIdentifierReleaseStatus modified +
DefinedSet modified +
Reaction modified +
RNADrug modified +
_Release modified +
ReplacedResidue modified +
ReferenceIsoform modified +
Anatomy modified +
Event modified +
CandidateSet modified +
FunctionalStatus modified +
EntitySet modified +
GO_BiologicalProcess modified +
MarkerReference modified +
NegativeRegulation modified +
Affiliation modified +
Polymer modified +
Compartment modified +
ReferenceGroup modified +
URL modified +
PositiveGeneExpressionRegulation modified +
FailedReaction modified +
ModifiedResidue modified +
EntityFunctionalStatus modified +
RetractionStatus modified +
FragmentInsertionModification modified +
ReactionType modified +
Requirement modified +
PhysicalEntityCellType modified +
ReferenceRNASequence modified +
_Deleted modified +
SequenceOntology modified +
ExternalOntology modified +
OtherEntity modified +
EntityWithAccessionedSequence modified +
DrugActionType modified +
TranslationalModification modified +
AbstractModifiedResidue modified +
FrontPage modified +
ReferenceEntity modified +
GroupModifiedResidue modified +
Book modified +
DatabaseObject modified +
NegativePrecedingEvent modified +
GO_CellularComponent modified +
PathwayDiagram modified +
ReferenceDNASequence modified +
ReferenceGeneProduct modified +
Regulation modified +
NegativePrecedingEventReason modified +
Drug modified +
NegativeGeneExpressionRegulation modified +
FragmentModification modified +
Person modified +
_UpdateTracker modified +
CatalystActivityReference modified +
FragmentReplacedModification modified +
Depolymerisation modified +
Figure modified +
StableIdentifierHistory modified +
Summation modified +
PhysicalEntity modified +
DatabaseIdentifier modified +
Polymer reviewed +
GenomeEncodedEntity reviewed +
CellDevelopmentStep reviewed +
ChemicalDrug reviewed +
Drug reviewed +
CellLineagePath reviewed +
Polymerisation reviewed +
InteractionEvent reviewed +
Cell reviewed +
Pathway reviewed +
EntityWithAccessionedSequence reviewed +
OtherEntity reviewed +
BlackBoxEvent reviewed +
CandidateSet reviewed +
EntitySet reviewed +
Complex reviewed +
Event reviewed +
PhysicalEntity reviewed +
RNADrug reviewed +
Reaction reviewed +
ReactionlikeEvent reviewed +
SimpleEntity reviewed +
FailedReaction reviewed +
Depolymerisation reviewed +
DefinedSet reviewed +
ProteinDrug reviewed +
Polymer revised +
GenomeEncodedEntity revised +
ChemicalDrug revised +
CellDevelopmentStep revised +
Drug revised +
CellLineagePath revised +
Polymerisation revised +
InteractionEvent revised +
Cell revised +
Pathway revised +
OtherEntity revised +
EntityWithAccessionedSequence revised +
BlackBoxEvent revised +
EntitySet revised +
CandidateSet revised +
Complex revised +
Event revised +
RNADrug revised +
PhysicalEntity revised +
Reaction revised +
ReactionlikeEvent revised +
SimpleEntity revised +
Depolymerisation revised +
FailedReaction revised +
DefinedSet revised +
ProteinDrug revised +
ReplacedResidue created 1
ReferenceIsoform created 1
Reaction created 1
_Release created 1
RNADrug created 1
CellType created 1
DefinedSet created 1
StableIdentifierReleaseStatus created 1
Species created 1
ReferenceMolecule created 1
EvidenceType created 1
FragmentDeletionModification created 1
IntraChainCrosslinkedResidue created 1
CellLineagePath created 1
ReferenceTherapeutic created 1
GenomeEncodedEntity created 1
Disease created 1
FunctionalStatusType created 1
ControlReference created 1
ControlledVocabulary created 1
TranscriptionalModification created 1
BlackBoxEvent created 1
GO_MolecularFunction created 1
InstanceEdit created 1
PositiveRegulation created 1
PsiMod created 1
Polymerisation created 1
ReferenceDatabase created 1
Cell created 1
SimpleEntity created 1
ReferenceSequence created 1
ReactionlikeEvent created 1
StableIdentifier created 1
ProteinDrug created 1
Taxon created 1
NonsenseMutation created 1
RegulationReference created 1
Publication created 1
InterChainCrosslinkedResidue created 1
_DeletedInstance created 1
CatalystActivity created 1
CellDevelopmentStep created 1
ChemicalDrug created 1
ReviewStatus created 1
GeneticallyModifiedResidue created 1
LiteratureReference created 1
Complex created 1
CrosslinkedResidue created 1
Pathway created 1
DeletedControlledVocabulary created 1
ModifiedNucleotide created 1
InteractionEvent created 1
DatabaseIdentifier created 1
PhysicalEntity created 1
Summation created 1
StableIdentifierHistory created 1
Figure created 1
_UpdateTracker created 1
FragmentModification created 1
NegativeGeneExpressionRegulation created 1
Person created 1
Depolymerisation created 1
FragmentReplacedModification created 1
CatalystActivityReference created 1
Regulation created 1
NegativePrecedingEventReason created 1
Drug created 1
PathwayDiagram created 1
GO_CellularComponent created 1
NegativePrecedingEvent created 1
ReferenceGeneProduct created 1
ReferenceDNASequence created 1
Book created 1
ReferenceEntity created 1
GroupModifiedResidue created 1
DatabaseObject created 1
OtherEntity created 1
EntityWithAccessionedSequence created 1
ExternalOntology created 1
AbstractModifiedResidue created 1
FrontPage created 1
DrugActionType created 1
TranslationalModification created 1
_Deleted created 1
ReferenceRNASequence created 1
PhysicalEntityCellType created 1
SequenceOntology created 1
FragmentInsertionModification created 1
RetractionStatus created 1
EntityFunctionalStatus created 1
Requirement created 1
ReactionType created 1
ModifiedResidue created 1
ReferenceGroup created 1
Compartment created 1
PositiveGeneExpressionRegulation created 1
FailedReaction created 1
URL created 1
Affiliation created 1
Polymer created 1
CandidateSet created 1
GO_BiologicalProcess created 1
FunctionalStatus created 1
EntitySet created 1
Event created 1
NegativeRegulation created 1
MarkerReference created 1
Anatomy created 1
Event structureModified +
BlackBoxEvent structureModified +
InteractionEvent structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
Depolymerisation structureModified +
Pathway structureModified +
CellDevelopmentStep structureModified +
ReactionlikeEvent structureModified +
CellLineagePath structureModified +
Reaction structureModified +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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