Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'InstanceEdit'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_applyToAllEditedInstances 1 TEXT N/A InstanceEdit   TEXT
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
author + INSTANCE Person InstanceEdit   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
dateTime 1 OTHER N/A InstanceEdit   TIMESTAMP
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
note 1 TEXT N/A InstanceEdit   TEXT
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'InstanceEdit' instances
Class name Attribute name Cardinality
Book modified +
PositiveRegulation modified +
ReferenceDNASequence modified +
NegativeRegulation modified +
TranslationalModification modified +
Pathway modified +
StableIdentifierReleaseStatus modified +
DrugActionType modified +
CatalystActivityReference modified +
RegulationReference modified +
EntityWithAccessionedSequence modified +
CellType modified +
MarkerReference modified +
Publication modified +
GeneticallyModifiedResidue modified +
ReferenceIsoform modified +
ControlReference modified +
Species modified +
_Release modified +
CrosslinkedResidue modified +
ReferenceTherapeutic modified +
FragmentReplacedModification modified +
ReactionType modified +
Anatomy modified +
NonsenseMutation modified +
GO_BiologicalProcess modified +
LiteratureReference modified +
FailedReaction modified +
Disease modified +
PsiMod modified +
OtherEntity modified +
FrontPage modified +
Depolymerisation modified +
InterChainCrosslinkedResidue modified +
InteractionEvent modified +
ReferenceEntity modified +
ControlledVocabulary modified +
NegativeGeneExpressionRegulation modified +
PhysicalEntityCellType modified +
StableIdentifier modified +
FragmentDeletionModification modified +
ChemicalDrug modified +
CellLineagePath modified +
GO_CellularComponent modified +
DefinedSet modified +
Compartment modified +
ReferenceGroup modified +
FunctionalStatus modified +
RNADrug modified +
NegativePrecedingEventReason modified +
SimpleEntity modified +
ModifiedNucleotide modified +
EntityFunctionalStatus modified +
AbstractModifiedResidue modified +
GroupModifiedResidue modified +
Drug modified +
DatabaseObject modified +
Person modified +
URL modified +
_UpdateTracker modified +
PositiveGeneExpressionRegulation modified +
Figure modified +
StableIdentifierHistory modified +
Polymer modified +
DatabaseIdentifier modified +
Requirement modified +
PhysicalEntity modified +
EvidenceType modified +
GO_MolecularFunction modified +
Polymerisation modified +
IntraChainCrosslinkedResidue modified +
Cell modified +
Affiliation modified +
FunctionalStatusType modified +
NegativePrecedingEvent modified +
PathwayDiagram modified +
ReferenceRNASequence modified +
EntitySet modified +
ProteinDrug modified +
CellDevelopmentStep modified +
Taxon modified +
TranscriptionalModification modified +
CatalystActivity modified +
_DeletedInstance modified +
ReviewStatus modified +
ReferenceDatabase modified +
Regulation modified +
BlackBoxEvent modified +
FragmentModification modified +
Complex modified +
ExternalOntology modified +
ReferenceGeneProduct modified +
SequenceOntology modified +
_Deleted modified +
DeletedControlledVocabulary modified +
CandidateSet modified +
GenomeEncodedEntity modified +
ModifiedResidue modified +
ReactionlikeEvent modified +
ReferenceMolecule modified +
ReplacedResidue modified +
InstanceEdit modified +
Event modified +
FragmentInsertionModification modified +
Summation modified +
RetractionStatus modified +
Reaction modified +
ReferenceSequence modified +
Pathway internalReviewed +
Event internalReviewed +
BlackBoxEvent internalReviewed +
Depolymerisation internalReviewed +
CellDevelopmentStep internalReviewed +
InteractionEvent internalReviewed +
ReactionlikeEvent internalReviewed +
Reaction internalReviewed +
Polymerisation internalReviewed +
CellLineagePath internalReviewed +
FailedReaction internalReviewed +
RNADrug authored 1
Cell authored 1
ReactionlikeEvent authored +
ChemicalDrug authored 1
CellLineagePath authored +
EntityWithAccessionedSequence authored 1
CandidateSet authored 1
GenomeEncodedEntity authored 1
DefinedSet authored 1
Polymerisation authored +
PhysicalEntity authored 1
Pathway authored +
Complex authored 1
Polymer authored 1
BlackBoxEvent authored +
Reaction authored +
Depolymerisation authored +
CellDevelopmentStep authored +
InteractionEvent authored +
ProteinDrug authored 1
FailedReaction authored +
EntitySet authored 1
OtherEntity authored 1
Drug authored 1
Event authored +
SimpleEntity authored 1
Complex reviewed +
BlackBoxEvent reviewed +
Polymer reviewed +
PhysicalEntity reviewed +
Pathway reviewed +
CandidateSet reviewed +
DefinedSet reviewed +
GenomeEncodedEntity reviewed +
CellLineagePath reviewed +
ChemicalDrug reviewed +
EntityWithAccessionedSequence reviewed +
Polymerisation reviewed +
RNADrug reviewed +
ReactionlikeEvent reviewed +
Cell reviewed +
SimpleEntity reviewed +
Event reviewed +
OtherEntity reviewed +
ProteinDrug reviewed +
FailedReaction reviewed +
EntitySet reviewed +
Drug reviewed +
Reaction reviewed +
InteractionEvent reviewed +
CellDevelopmentStep reviewed +
Depolymerisation reviewed +
BlackBoxEvent structureModified +
Event structureModified +
Pathway structureModified +
CellLineagePath structureModified +
FailedReaction structureModified +
Polymerisation structureModified +
Reaction structureModified +
Depolymerisation structureModified +
CellDevelopmentStep structureModified +
InteractionEvent structureModified +
ReactionlikeEvent structureModified +
Complex edited +
BlackBoxEvent edited +
Polymer edited +
PhysicalEntity edited +
Pathway edited +
EntityWithAccessionedSequence edited +
ChemicalDrug edited +
CellLineagePath edited +
GenomeEncodedEntity edited +
CandidateSet edited +
DefinedSet edited +
Polymerisation edited +
RNADrug edited +
Cell edited +
ReactionlikeEvent edited +
SimpleEntity edited +
Event edited +
EntitySet edited +
ProteinDrug edited +
FailedReaction edited +
OtherEntity edited +
Drug edited +
Reaction edited +
CellDevelopmentStep edited +
Depolymerisation edited +
InteractionEvent edited +
_Deleted replacementInstances +
ReferenceRNASequence created 1
ProteinDrug created 1
EntitySet created 1
CellDevelopmentStep created 1
TranscriptionalModification created 1
CatalystActivity created 1
Taxon created 1
_DeletedInstance created 1
StableIdentifierHistory created 1
Polymer created 1
DatabaseIdentifier created 1
Requirement created 1
PhysicalEntity created 1
EvidenceType created 1
Polymerisation created 1
GO_MolecularFunction created 1
IntraChainCrosslinkedResidue created 1
Cell created 1
FunctionalStatusType created 1
Affiliation created 1
NegativePrecedingEvent created 1
PathwayDiagram created 1
ReplacedResidue created 1
InstanceEdit created 1
Event created 1
FragmentInsertionModification created 1
Summation created 1
RetractionStatus created 1
ReferenceSequence created 1
Reaction created 1
Regulation created 1
ReferenceDatabase created 1
ReviewStatus created 1
FragmentModification created 1
BlackBoxEvent created 1
Complex created 1
ExternalOntology created 1
ReferenceGeneProduct created 1
SequenceOntology created 1
_Deleted created 1
DeletedControlledVocabulary created 1
GenomeEncodedEntity created 1
CandidateSet created 1
ModifiedResidue created 1
ReactionlikeEvent created 1
ReferenceMolecule created 1
_Release created 1
Species created 1
ReferenceTherapeutic created 1
CrosslinkedResidue created 1
FragmentReplacedModification created 1
ReactionType created 1
Anatomy created 1
NonsenseMutation created 1
GO_BiologicalProcess created 1
LiteratureReference created 1
FailedReaction created 1
OtherEntity created 1
PsiMod created 1
Disease created 1
Depolymerisation created 1
InterChainCrosslinkedResidue created 1
FrontPage created 1
InteractionEvent created 1
ReferenceEntity created 1
Book created 1
PositiveRegulation created 1
ReferenceDNASequence created 1
NegativeRegulation created 1
Pathway created 1
TranslationalModification created 1
StableIdentifierReleaseStatus created 1
DrugActionType created 1
CatalystActivityReference created 1
EntityWithAccessionedSequence created 1
RegulationReference created 1
CellType created 1
Publication created 1
MarkerReference created 1
GeneticallyModifiedResidue created 1
ControlReference created 1
ReferenceIsoform created 1
NegativePrecedingEventReason created 1
SimpleEntity created 1
ModifiedNucleotide created 1
EntityFunctionalStatus created 1
Drug created 1
AbstractModifiedResidue created 1
GroupModifiedResidue created 1
Person created 1
DatabaseObject created 1
_UpdateTracker created 1
URL created 1
PositiveGeneExpressionRegulation created 1
Figure created 1
ControlledVocabulary created 1
NegativeGeneExpressionRegulation created 1
StableIdentifier created 1
PhysicalEntityCellType created 1
FragmentDeletionModification created 1
ChemicalDrug created 1
CellLineagePath created 1
DefinedSet created 1
GO_CellularComponent created 1
ReferenceGroup created 1
Compartment created 1
RNADrug created 1
FunctionalStatus created 1
Depolymerisation revised +
CellDevelopmentStep revised +
InteractionEvent revised +
Reaction revised +
Drug revised +
ProteinDrug revised +
FailedReaction revised +
EntitySet revised +
OtherEntity revised +
Event revised +
SimpleEntity revised +
Cell revised +
ReactionlikeEvent revised +
RNADrug revised +
Polymerisation revised +
ChemicalDrug revised +
CellLineagePath revised +
EntityWithAccessionedSequence revised +
CandidateSet revised +
GenomeEncodedEntity revised +
DefinedSet revised +
Pathway revised +
PhysicalEntity revised +
Polymer revised +
BlackBoxEvent revised +
Complex revised +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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