Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'Complex'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
cellType + INSTANCE CellType PhysicalEntity ALL INTEGER(10) UNSIGNED
compartment + INSTANCE Compartment Complex   INTEGER(10) UNSIGNED
componentCellType + INSTANCE PhysicalEntityCellType Complex   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
disease + INSTANCE Disease PhysicalEntity   INTEGER(10) UNSIGNED
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
entityOnOtherCell + INSTANCE PhysicalEntity Complex   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
hasComponent + INSTANCE PhysicalEntity Complex ALL INTEGER(10) UNSIGNED
includedLocation + INSTANCE Compartment Complex   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
isChimeric 1 OTHER N/A Complex   ENUM('TRUE','FALSE')
literatureReference + INSTANCE Publication PhysicalEntity   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity   TEXT
relatedSpecies + INSTANCE Species Complex   INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
species + INSTANCE Species Complex   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
stoichiometryKnown 1 OTHER N/A Complex   ENUM('TRUE','FALSE')
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED
systematicName 1 TEXT N/A PhysicalEntity   TEXT

Referers of class 'Complex' instances
Class name Attribute name Cardinality
EntityFunctionalStatus normalEntity 1
ReactionlikeEvent requiredInputComponent +
Reaction requiredInputComponent +
BlackBoxEvent requiredInputComponent +
Polymerisation requiredInputComponent +
CellDevelopmentStep requiredInputComponent +
Depolymerisation requiredInputComponent +
FailedReaction requiredInputComponent +
Complex hasComponent +
_Deleted replacementInstances +
Cell proteinMarker +
Complex entityOnOtherCell +
Reaction entityOnOtherCell +
CellDevelopmentStep entityOnOtherCell +
Polymerisation entityOnOtherCell +
FailedReaction entityOnOtherCell +
ReactionlikeEvent entityOnOtherCell +
BlackBoxEvent entityOnOtherCell +
Depolymerisation entityOnOtherCell +
ChemicalDrug inferredFrom +
PhysicalEntity inferredFrom +
Drug inferredFrom +
Complex inferredFrom +
ProteinDrug inferredFrom +
SimpleEntity inferredFrom +
Polymer inferredFrom +
CandidateSet inferredFrom +
Cell inferredFrom +
DefinedSet inferredFrom +
EntityWithAccessionedSequence inferredFrom +
GenomeEncodedEntity inferredFrom +
OtherEntity inferredFrom +
EntitySet inferredFrom +
RNADrug inferredFrom +
Requirement regulator 1
PositiveGeneExpressionRegulation regulator 1
PositiveRegulation regulator 1
NegativeGeneExpressionRegulation regulator 1
NegativeRegulation regulator 1
Regulation regulator 1
EntitySet hasMember +
CandidateSet hasMember +
DefinedSet hasMember +
FailedReaction output +
Polymerisation output +
Depolymerisation output +
BlackBoxEvent output +
Reaction output +
ReactionlikeEvent output +
_UpdateTracker updatedInstance 1
InteractionEvent partners +
Polymer repeatedUnit +
EntityFunctionalStatus diseaseEntity 1
Drug inferredTo +
Complex inferredTo +
ChemicalDrug inferredTo +
PhysicalEntity inferredTo +
ProteinDrug inferredTo +
SimpleEntity inferredTo +
Cell inferredTo +
DefinedSet inferredTo +
CandidateSet inferredTo +
Polymer inferredTo +
EntityWithAccessionedSequence inferredTo +
GenomeEncodedEntity inferredTo +
OtherEntity inferredTo +
EntitySet inferredTo +
RNADrug inferredTo +
NegativeGeneExpressionRegulation activeUnit +
Regulation activeUnit +
NegativeRegulation activeUnit +
PositiveGeneExpressionRegulation activeUnit +
PositiveRegulation activeUnit +
Requirement activeUnit +
CatalystActivity activeUnit +
CatalystActivity physicalEntity 1
PhysicalEntityCellType physicalEntity 1
CandidateSet hasCandidate +
ReactionlikeEvent input +
Reaction input +
BlackBoxEvent input +
Polymerisation input +
Depolymerisation input +
FailedReaction input +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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