Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Attributes of class 'CandidateSet'
Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
cellType + INSTANCE CellType PhysicalEntity ALL INTEGER(10) UNSIGNED
compartment + INSTANCE Compartment EntitySet   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
disease + INSTANCE Disease PhysicalEntity   INTEGER(10) UNSIGNED
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
hasCandidate + INSTANCE PhysicalEntity CandidateSet ALL INTEGER(10) UNSIGNED
hasMember + INSTANCE PhysicalEntity EntitySet ALL INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
isOrdered 1 OTHER N/A EntitySet   ENUM('TRUE','FALSE')
literatureReference + INSTANCE Publication PhysicalEntity   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity   TEXT
relatedSpecies + INSTANCE Species EntitySet   INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
species + INSTANCE Species EntitySet   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED
systematicName 1 TEXT N/A PhysicalEntity   TEXT

Referers of class 'CandidateSet' instances
Class name Attribute name Cardinality
Polymer repeatedUnit +
Reaction output +
ReactionlikeEvent output +
BlackBoxEvent output +
Polymerisation output +
Depolymerisation output +
FailedReaction output +
Depolymerisation requiredInputComponent +
FailedReaction requiredInputComponent +
CellDevelopmentStep requiredInputComponent +
BlackBoxEvent requiredInputComponent +
Polymerisation requiredInputComponent +
Reaction requiredInputComponent +
ReactionlikeEvent requiredInputComponent +
EntityFunctionalStatus diseaseEntity 1
Polymerisation input +
BlackBoxEvent input +
Reaction input +
ReactionlikeEvent input +
FailedReaction input +
Depolymerisation input +
Regulation activeUnit +
CatalystActivity activeUnit +
Requirement activeUnit +
NegativeRegulation activeUnit +
PositiveGeneExpressionRegulation activeUnit +
PositiveRegulation activeUnit +
NegativeGeneExpressionRegulation activeUnit +
EntityFunctionalStatus normalEntity 1
Cell inferredTo +
EntitySet inferredTo +
CandidateSet inferredTo +
SimpleEntity inferredTo +
OtherEntity inferredTo +
RNADrug inferredTo +
Polymer inferredTo +
PhysicalEntity inferredTo +
ProteinDrug inferredTo +
ChemicalDrug inferredTo +
GenomeEncodedEntity inferredTo +
Drug inferredTo +
EntityWithAccessionedSequence inferredTo +
Complex inferredTo +
DefinedSet inferredTo +
CandidateSet hasCandidate +
_Deleted replacementInstances +
_UpdateTracker updatedInstance 1
PositiveRegulation regulator 1
PositiveGeneExpressionRegulation regulator 1
NegativeGeneExpressionRegulation regulator 1
Regulation regulator 1
NegativeRegulation regulator 1
Requirement regulator 1
InteractionEvent partners +
PhysicalEntityCellType physicalEntity 1
CatalystActivity physicalEntity 1
DefinedSet hasMember +
CandidateSet hasMember +
EntitySet hasMember +
GroupModifiedResidue modification 1
CrosslinkedResidue modification 1
IntraChainCrosslinkedResidue modification 1
ModifiedNucleotide modification 1
InterChainCrosslinkedResidue modification 1
CellDevelopmentStep entityOnOtherCell +
Polymerisation entityOnOtherCell +
FailedReaction entityOnOtherCell +
Depolymerisation entityOnOtherCell +
Complex entityOnOtherCell +
ReactionlikeEvent entityOnOtherCell +
Reaction entityOnOtherCell +
BlackBoxEvent entityOnOtherCell +
Complex hasComponent +
GenomeEncodedEntity inferredFrom +
EntityWithAccessionedSequence inferredFrom +
Drug inferredFrom +
Complex inferredFrom +
DefinedSet inferredFrom +
RNADrug inferredFrom +
Polymer inferredFrom +
PhysicalEntity inferredFrom +
ProteinDrug inferredFrom +
ChemicalDrug inferredFrom +
Cell inferredFrom +
EntitySet inferredFrom +
CandidateSet inferredFrom +
SimpleEntity inferredFrom +
OtherEntity inferredFrom +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.

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