Query author contributions in Reactome
Reactome depends on collaboration between our curation team and outside experts to assemble and peer-review its pathway modules. The integration of ORCID within Reactome enables us to meet a key challenge with authoring, curating and reviewing biological information by incentivizing and crediting the external experts that contribute their expertise and time to the Reactome curation process. More information is available at ORCID and Reactome.
If you have an ORCID ID that is not listed on this page, please forward this information to us and we will update your Reactome pathway records.
Details on Person The replication strategy of SARS-CoV-2 can generate double-s...
| Class:Id | Summation:9756272 |
|---|---|
| _displayName | The replication strategy of SARS-CoV-2 can generate double-s... |
| _timestamp | 2022-02-17 05:14:16 |
| created | [InstanceEdit:9756295] Shamovsky, Veronica, 2021-10-13 |
| literatureReference | [LiteratureReference:9756271] RIG-I triggers a signaling-abortive anti-SARS-CoV-2 defense in human lung cells [LiteratureReference:9756296] RIG-I-Like Receptor-Mediated Recognition of Viral Genomic RNA of Severe Acute Respiratory Syndrome Coronavirus-2 and Viral Escape From the Host Innate Immune Responses [LiteratureReference:9756297] SARS-CoV-2 sensing by RIG-I and MDA5 links epithelial infection to macrophage inflammation [LiteratureReference:9755226] SARS-CoV-2 triggers an MDA-5-dependent interferon response which is unable to control replication in lung epithelial cells [LiteratureReference:9756289] The RNA sensor MDA5 detects SARS-CoV-2 infection [LiteratureReference:9755230] MDA5 Governs the Innate Immune Response to SARS-CoV-2 in Lung Epithelial Cells [LiteratureReference:9759414] Pathological features of COVID-19-associated lung injury: a preliminary proteomics report based on clinical samples |
| modified | [InstanceEdit:9756502] Shamovsky, Veronica, 2021-10-15 [InstanceEdit:9759426] Shamovsky, Veronica, 2021-12-03 [InstanceEdit:9765911] Shamovsky, Veronica, 2022-02-17 |
| text | The replication strategy of SARS-CoV-2 can generate double-stranded RNA (dsRNA) intermediates, that may act as pathogen-associated molecular patterns (PAMPs) recognized by cytoplasmic pattern recognition receptor (PRR) such as antiviral innate immune response receptor RIG-I (also known as DEAD box protein 58, DDX58). DDX58 recognizes short dsRNAs. Viral RNA binding provokes a change in DDX58 conformation exposing the caspase activation and recruitment domain (CARD) leading to DDX58 oligomerization, allowing it to interact with mitochondrial antiviral‑signaling protein (MAVS, IPS‑1). Gene ablation using CRISPR/Cas9 showed that both DDX58 and IFIH1 sense severe acute respiratory syndrome coronavirus type 2 (SARS-CoV-2) infection in human embryonic kidney HEK293T cells (Kouwaki T et al. 2021). Similar findings were reported for SARS-CoV-2-infected human adenocarcinoma-derived lung epithelial Calu-3 cells (Thorne LG et al. 2021). On the contrary, several studies showed that depletion of DDX58 had no effect in infected Calu-3 cells (Sampaio NG et al. 2021; Yin X et al. 2021; Rebendenne A et al. 2021). Another group reported that the helicase domain of DDX58 interacts with the 3′ UTR of the SARS-CoV-2 RNA in human lung epithelial cells, though this interaction failed to activate the ATPase activity of DDX58 and binding to MAVS (Yamada T et al. 2021). DDX58 (RIG-I), along with other proteins associated to virus infection (MAVS, TRAFs), were differentially expressed in COVID-19 patients vs healthy controls (Leng L et al. 2020). This Reactome event describes binding of DDX58 (RIG-I) to SARS-CoV-2 dsRNA intermediates, however the role of DDX58 in the antiviral innate immune response to SARS-CoV-2 remains elusive. |
| (summation) | [Reaction:9755258] DDX58 binds SARS-CoV-2 dsRNA intermediates [Homo sapiens] |
| [Change default viewing format] | |
