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Details on Person UniProt:O94906 PRPF6

Class:IdReferenceGeneProduct:71880
_chainChangeLogchain:1-941 added on Fri February 6 2015
_displayNameUniProt:O94906 PRPF6
_timestamp2024-11-03 20:20:53
chainchain:1-941
checksum91C2F1ADCA439BE9
commentFUNCTION Involved in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex, one of the building blocks of the spliceosome (PubMed:20118938, PubMed:21549338, PubMed:28781166). Enhances dihydrotestosterone-induced transactivation activity of AR, as well as dexamethasone-induced transactivation activity of NR3C1, but does not affect estrogen-induced transactivation.SUBUNIT Identified in the spliceosome B complex (PubMed:28781166). Identified in the spliceosome C complex (PubMed:11991638). Associates with the U5 snRNP particle (PubMed:10788320). Component of the U4/U6-U5 tri-snRNP complex composed of the U4, U6 and U5 snRNAs and at least PRPF3, PRPF4, PRPF6, PRPF8, PRPF31, SNRNP200, TXNL4A, SNRNP40, DDX23, CD2BP2, PPIH, SNU13, EFTUD2, SART1 and USP39, LSm proteins LSm2-8 and Sm proteins (PubMed:16723661, PubMed:26912367, PubMed:28781166). Interacts with ARAF (PubMed:10848612). Interacts with AR and NR3C1, but not ESR1, independently of the presence of hormones (PubMed:12039962). Interacts with USH1G (PubMed:34023904).INTERACTION Localized in splicing speckles.ALTERNATIVE PRODUCTS Widely expressed.PTM Phosphorylated by PRP4K during spliceosome assembly.DISEASE The disease may be caused by variants affecting the gene represented in this entry. Cells from RP60 patients show intron retention for pre-mRNA bearing specific splicing signals.
descriptionrecommendedName: Pre-mRNA-processing factor 6 alternativeName: Androgen receptor N-terminal domain-transactivating protein 1 shortName: ANT-1 alternativeName: PRP6 homolog alternativeName: U5 snRNP-associated 102 kDa protein shortName: U5-102 kDa protein
geneNamePRPF6
C20orf14
identifierO94906
isSequenceChangedFALSE
keyword3D-structure
Alternative splicing
Direct protein sequencing
Disease variant
mRNA processing
mRNA splicing
Nucleus
Phosphoprotein
Proteomics identification
Reference proteome
Repeat
Retinitis pigmentosa
Spliceosome
modified[InstanceEdit:9836292] Weiser, Joel, 2023-05-25
[InstanceEdit:9852000] Weiser, Joel, 2023-11-03
[InstanceEdit:9917590] Weiser, Joel, 2024-08-09
[InstanceEdit:9926675] Weiser, Joel, 2024-11-03
namePRPF6
referenceDatabase[ReferenceDatabase:2] UniProt
referenceGene[ReferenceDNASequence:8995631] ENSEMBL:ENSG00000101161 PRPF6 [Homo sapiens]
secondaryIdentifierPRP6_HUMAN
B2RAR5
B3KMC6
O95109
Q5VXS5
Q9H3Z1
Q9H4T9
Q9H4U8
Q9NTE6
sequenceLength941
species[Species:48887] Homo sapiens
(isoformParent)[ReferenceIsoform:8977157] UniProt:O94906-1 PRPF6 [Homo sapiens]
[ReferenceIsoform:8977158] UniProt:O94906-2 PRPF6 [Homo sapiens]
(referenceEntity)[EntityWithAccessionedSequence:71881] PRPF6 [nucleoplasm] [Homo sapiens]
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No pathways have been reviewed or authored by UniProt:O94906 PRPF6 (71880)