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Details on Person UniProt:O15054-2 KDM6B

Class:IdReferenceIsoform:233298
_chainChangeLogchain:1-1643 added on Sat February 7 2015
_displayNameUniProt:O15054-2 KDM6B
_timestamp2025-02-21 18:57:56
chainchain:1-1643
checksum8CE32AE602683BA3
commentFUNCTION Histone demethylase that specifically demethylates 'Lys-27' of histone H3, thereby playing a central role in histone code (PubMed:17713478, PubMed:17825402, PubMed:17851529, PubMed:18003914). Demethylates trimethylated and dimethylated H3 'Lys-27' (PubMed:17713478, PubMed:17825402, PubMed:17851529, PubMed:18003914). Plays a central role in regulation of posterior development, by regulating HOX gene expression (PubMed:17851529). Involved in inflammatory response by participating in macrophage differentiation in case of inflammation by regulating gene expression and macrophage differentiation (PubMed:17825402). Plays a demethylase-independent role in chromatin remodeling to regulate T-box family member-dependent gene expression by acting as a link between T-box factors and the SMARCA4-containing SWI/SNF remodeling complex (By similarity).CATALYTIC ACTIVITY N(6),N(6),N(6)-trimethyl-L-lysyl(27)-[histone H3] + 2 2-oxoglutarate + 2 O2 = N(6)-methyl-L-lysyl(27)-[histone H3] + 2 formaldehyde + 2 succinate + 2 CO2COFACTOR Interacts with TLE1 (By similarity). Component of the MLL4 complex, at least composed of KMT2B/MLL4, ASH2L, RBBP5, WDR5, and KDM6B (PubMed:17825402). Interacts with TBX21, SMARCA4, SMARCC1 and SMARCC2 (By similarity).INTERACTION By 12-O-tetradecanoylphorbol-13-acetate (TPA) in myeloid leukemia cells.DISEASE The disease is caused by variants affecting the gene represented in this entry.SIMILARITY Belongs to the UTX family.SEQUENCE CAUTION Extended N-terminus.
created[InstanceEdit:217385] Schmidt, EE, 2008-03-27 06:23:53
descriptionrecommendedName: Lysine-specific demethylase 6B ecNumber evidence="7 8 9 10"1.14.11.68 alternativeName: JmjC domain-containing protein 3 alternativeName: Jumonji domain-containing protein 3 alternativeName: Lysine demethylase 6B alternativeName: fullName evidence="14"[histone H3]-trimethyl-L-lysine(27) demethylase 6B
geneNameKDM6B
JMJD3
KIAA0346
identifierO15054
isoformParent
isSequenceChangedFALSE
keyword3D-structure
Alternative splicing
Chromatin regulator
Dioxygenase
Disease variant
Inflammatory response
Intellectual disability
Iron
Isopeptide bond
Metal-binding
Nucleus
Oxidoreductase
Phosphoprotein
Proteomics identification
Reference proteome
Ubl conjugation
Zinc
modified[InstanceEdit:9836292] Weiser, Joel, 2023-05-25
[InstanceEdit:9852000] Weiser, Joel, 2023-11-03
[InstanceEdit:9917590] Weiser, Joel, 2024-08-09
[InstanceEdit:9926675] Weiser, Joel, 2024-11-03
[InstanceEdit:9939033] Weiser, Joel, 2025-02-21
nameKDM6B
referenceDatabase[ReferenceDatabase:2] UniProt
referenceGene[ReferenceDNASequence:3222525] ENSEMBL:ENSG00000132510 KDM6B [Homo sapiens]
secondaryIdentifierKDM6B_HUMAN
C9IZ40
Q96G33
sequenceLength1643
species[Species:48887] Homo sapiens
variantIdentifierO15054-2
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