Reactome: A Curated Pathway Database
THIS SITE IS USED FOR CURATION AND TESTING
IT IS NOT STABLE, IS LINKED TO AN INCOMPLETE DATA SET, AND IS NOT MONITORED FOR PERFORMANCE. WE STRONGLY RECOMMEND THE USE OF OUR PUBLIC SITE

Query author contributions in Reactome

Reactome depends on collaboration between our curation team and outside experts to assemble and peer-review its pathway modules. The integration of ORCID within Reactome enables us to meet a key challenge with authoring, curating and reviewing biological information by incentivizing and crediting the external experts that contribute their expertise and time to the Reactome curation process. More information is available at ORCID and Reactome.

If you have an ORCID ID that is not listed on this page, please forward this information to us and we will update your Reactome pathway records.

Name Email address

Details on Person UniProt:Q9NZC3 GDE1

Class:IdReferenceGeneProduct:230355
_chainChangeLogchain:1-331 added on Sat February 7 2015
_displayNameUniProt:Q9NZC3 GDE1
_timestamp2025-02-21 18:47:04
chainchain:1-331
checksumEFE567E71DBD4AC5
commentFUNCTION Hydrolyzes the phosphodiester bond of glycerophosphodiesters such as glycerophosphoinositol (GroPIns) and glycerophosphoethanolamine (GroPEth), to yield a glycerol phosphate and an alcohol (By similarity). Hydrolyzes glycerophospho-N-acylethanolamines to N-acylethanolamines in the brain and participates in bioactive N-acylethanolamine biosynthesis such as anandamide (an endocannabinoid), N-palmitoylethanolamine (an anti-inflammatory), and N-oleoylethanolamine (an anorexic). In addition, has a lysophospholipase D activity by hydrolyzing N-acyl-lysoplasmenylethanolamine (N-acyl-lysoPlsEt) to N-acylethanolamine. However lysophospholipase D activity is lower than glycerophosphodiester phosphodiesterase activity (By similarity). Has little or no activity towards glycerophosphocholine (By similarity).CATALYTIC ACTIVITY sn-glycero-3-phospho-1D-myo-inositol + H2O = myo-inositol + sn-glycerol 3-phosphate + H(+)CATALYTIC ACTIVITY 1-O-(1Z-octadecenyl)-sn-glycero-3-phospho-(N-5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + H2O = 1-O-(1Z-octadecenyl)-sn-glycero-3-phosphate + N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + H(+)CATALYTIC ACTIVITY 1-O-(1Z-octadecenyl)-sn-glycero-3-phospho-(N-9Z-octadecenoyl)-ethanolamine + H2O = 1-O-(1Z-octadecenyl)-sn-glycero-3-phosphate + N-(9Z-octadecenoyl) ethanolamine + H(+)CATALYTIC ACTIVITY 1-O-(1Z-octadecenyl)-sn-glycero-3-phospho-N-hexadecanoyl-ethanolamine + H2O = 1-O-(1Z-octadecenyl)-sn-glycero-3-phosphate + N-hexadecanoylethanolamine + H(+)CATALYTIC ACTIVITY N-(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-sn-glycero-3-phosphoethanolamine + H2O = N-(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl ethanolamine + sn-glycerol 3-phosphate + H(+)CATALYTIC ACTIVITY N-eicosanoyl-sn-glycero-3-phosphoethanolamine + H2O = N-eicosanoyl ethanolamine + sn-glycerol 3-phosphate + H(+)CATALYTIC ACTIVITY N-hexadecanoyl-sn-glycero-3-phosphoethanolamine + H2O = N-hexadecanoylethanolamine + sn-glycerol 3-phosphate + H(+)CATALYTIC ACTIVITY N-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-(9Z-octadecenoyl) ethanolamine + sn-glycerol 3-phosphate + H(+)CATALYTIC ACTIVITY N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + sn-glycerol 3-phosphate + H(+)COFACTOR Inhibited by EDTA, calcium chloride, and zinc chloride. Enhanced by magnesium chloride (By similarity). Glycerophosphodiester phosphodiesterase activity can be modulated by G-protein signaling pathways (By similarity).SUBUNIT Interacts with PRAF2 (PubMed:16472945). Interacts with RGS16 (By similarity).INTERACTION Perinuclear vesicles and cell membrane.TISSUE SPECIFICITY Widely expressed.PTM N-glycosylated.SIMILARITY Belongs to the glycerophosphoryl diester phosphodiesterase family.
created[InstanceEdit:217385] Schmidt, EE, 2008-03-27 06:23:53
descriptionrecommendedName: fullName evidence="7"Glycerophosphodiester phosphodiesterase 1 alternativeName: fullName evidence="7"Glycerophosphoinositol glycerophosphodiesterase GDE1 ecNumber evidence="1"3.1.4.44 alternativeName: fullName evidence="7"Lysophospholipase D GDE1 ecNumber evidence="2"3.1.4.- alternativeName: fullName evidence="6"Membrane-interacting protein of RGS16 alternativeName: RGS16-interacting membrane protein
geneNameGDE1
MIR16
identifierQ9NZC3
isSequenceChangedFALSE
keywordCell membrane
Cytoplasmic vesicle
Glycoprotein
Hydrolase
Lipid metabolism
Magnesium
Membrane
Metal-binding
Proteomics identification
Reference proteome
Transmembrane
Transmembrane helix
modified[InstanceEdit:9836292] Weiser, Joel, 2023-05-25
[InstanceEdit:9852000] Weiser, Joel, 2023-11-03
[InstanceEdit:9926675] Weiser, Joel, 2024-11-03
[InstanceEdit:9939033] Weiser, Joel, 2025-02-21
nameGDE1
referenceDatabase[ReferenceDatabase:2] UniProt
referenceGene[ReferenceDNASequence:8990715] ENSEMBL:ENSG00000006007 GDE1 [Homo sapiens]
secondaryIdentifierGDE1_HUMAN
O43334
Q6PKF7
Q7KYR4
sequenceLength331
species[Species:48887] Homo sapiens
(referenceEntity)[EntityWithAccessionedSequence:1498746] GDE1 [plasma membrane] [Homo sapiens]
[Change default viewing format]
No pathways have been reviewed or authored by UniProt:Q9NZC3 GDE1 (230355)